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revision 1374 by gross, Tue Jan 8 09:37:55 2008 UTC revision 3076 by jfenwick, Mon Aug 2 05:21:40 2010 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  
2    ########################################################
3    #
4    # Copyright (c) 2003-2010 by University of Queensland
5    # Earth Systems Science Computational Center (ESSCC)
6    # http://www.uq.edu.au/esscc
7    #
8    # Primary Business: Queensland, Australia
9    # Licensed under the Open Software License version 3.0
10    # http://www.opensource.org/licenses/osl-3.0.php
11  #  #
12  #              http://www.access.edu.au  ########################################################
13  #       Primary Business: Queensland, Australia  
14  #  Licensed under the Open Software License version 3.0  
 #     http://www.opensource.org/licenses/osl-3.0.php  
   
 # top-level Scons configuration file for all esys13 modules  
 # Begin initialisation Section  
 # all of this section just intialises default environments and helper  
 # scripts. You shouldn't need to modify this section.  
15  EnsureSConsVersion(0,96,91)  EnsureSConsVersion(0,96,91)
16  EnsurePythonVersion(2,3)  EnsurePythonVersion(2,3)
17    
18  #===============================================================  import sys, os, re, socket, platform, stat
19  #   import tools:  # For copy()
20  import glob  import shutil
21  import sys, os, re  
22  # Add our extensions  # Add our extensions
23  if sys.path.count('scons')==0: sys.path.append('scons')  if os.path.isdir('scons'): sys.path.append('scons')
24  import scons_extensions  import scons_extensions
25    
26  # We may also need to know where python's site-packages subdirectory lives  # Use /usr/lib64 if available, else /usr/lib
27  python_version = 'python%s.%s'%(sys.version_info[0],sys.version_info[1])  usr_lib = '/usr/lib'
28    if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'
 #===============================================================  
   
 tools_prefix="/usr"  
   
 #==============================================================================================      
 #      
 #    get the installation prefix  
 #  
 prefix = ARGUMENTS.get('prefix', '/usr')  
   
 # We may also need to know where python's site-packages subdirectory lives  
 python_version = 'python%s.%s'%(sys.version_info[0],sys.version_info[1])  
 # Install as a standard python package in /usr/lib64 if available, else in /usr/lib  
 if os.path.isdir(  prefix+"/lib64/"+python_version+"/site-packages"):  
    sys_dir_packages =  prefix+"/lib64/"+python_version+"/site-packages/esys"  
    sys_dir_libraries = prefix+"/lib64"  
 else:  
    sys_dir_packages =  prefix+"/lib/"+python_version+"/site-packages/esys"  
    sys_dir_libraries = prefix+"/lib"  
   
 sys_dir_examples = prefix+"/share/doc/esys"  
   
 source_root = Dir('#.').abspath  
   
 dir_packages = os.path.join(source_root,"esys")  
 dir_examples = os.path.join(source_root,"examples")  
 dir_libraries = os.path.join(source_root,"lib")  
   
 print "Source root is : ",source_root  
 print " Default packages local installation:    ", dir_packages  
 print " Default library local installation  ", dir_libraries  
 print " Default example local  installation:    ", dir_examples  
 print "Install prefix is: ", prefix  
 print " Default packages system installation:   ", sys_dir_packages  
 print " Default library system installation     ", sys_dir_libraries  
 print " Default example system installation:    ", sys_dir_examples  
   
 #==============================================================================================      
   
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 # Where to install?  
 #==============================================================================================      
 #      
 #    get the options file if present:  
 #  
 options_file = ARGUMENTS.get('options_file','')  
29    
30  if not os.path.isfile(options_file) :  # The string python2.4 or python2.5
31      options_file = False  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])
   
 if not options_file :  
    import socket  
    hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
    tmp = os.path.join("scons",hostname+"_options.py")  
   
    if os.path.isfile(tmp) :  
       options_file = tmp  
32    
33    # MS Windows support, many thanks to PH
34  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS_PLATFORM = (os.name== "nt")
35    
36  # If you're not going to tell me then......  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)
 # FIXME: add one for the altix too.  
 if not options_file :  
    if IS_WINDOWS_PLATFORM :  
       options_file = "scons/windows_mscv71_options.py"  
    else:  
       options_file = "scons/linux_gcc_eg_options.py"  
   
 # and load it  
 opts = Options(options_file, ARGUMENTS)  
 #================================================================  
 #  
 #   check if UMFPACK is installed on the system:  
 #  
 uf_root=None  
 for i in [ 'UMFPACK', 'umfpack', 'ufsparse', 'UFSPARSE']:  
    if os.path.isdir(os.path.join(tools_prefix,'include',i)):  
        uf_root=i  
        print i," is used form ",tools_prefix  
        break  
 if not uf_root==None:  
    umf_path_default=os.path.join(tools_prefix,'include',uf_root)  
    umf_lib_path_default=os.path.join(tools_prefix,'lib')  
    umf_libs_default=['umfpack']  
    amd_path_default=os.path.join(tools_prefix,'include',uf_root)  
    amd_lib_path_default=os.path.join(tools_prefix,'lib')  
    amd_libs_default=['amd']  
    ufc_path_default=os.path.join(tools_prefix,'include',uf_root)  
 else:  
    umf_path_default=None  
    umf_lib_path_default=None  
    umf_libs_default=None  
    amd_path_default=None  
    amd_lib_path_default=None  
    amd_libs_default=None  
    ufc_path_default=None  
 #  
 #==========================================================================  
 #  
 #    python installation:  
 #  
 python_path_default=os.path.join(tools_prefix,'include','python%s.%s'%(sys.version_info[0],sys.version_info[1]))  
 python_lib_path_default=os.path.join(tools_prefix,'lib')  
 python_lib_default="python%s.%s"%(sys.version_info[0],sys.version_info[1])  
   
 #==========================================================================  
 #  
 #    boost installation:  
 #  
 boost_path_default=os.path.join(tools_prefix,'include')  
 boost_lib_path_default=os.path.join(tools_prefix,'lib')  
 boost_lib_default=['boost_python']  
37    
38  #==========================================================================  #Holds names of variables from the calling environment which need to be passed
39  #  #to tools
40  #    check if netCDF is installed on the system:  env_export=[]
41  #  
42  netCDF_path_default=os.path.join(tools_prefix,'include','netcdf-3')  #Determine where to read options from use:
43  netCDF_lib_path_default=os.path.join(tools_prefix,'lib')  #1. command line
44    #2. scons/<hostname>_options.py
45    #3. name as part of a cluster
46    options_file=ARGUMENTS.get('options_file', None)
47    effective_hostname=socket.gethostname().split('.')[0]
48    if not options_file:
49      mangledhostname = re.sub("[^0-9a-zA-Z]", "_", effective_hostname)
50      options_file = os.path.join("scons",mangledhostname+"_options.py")
51      #If there is no options file with that name see if there is a substitute
52      if not os.path.isfile(options_file):
53        effective_hostname = scons_extensions.effectiveName(effective_hostname)
54        mangledhostname = re.sub("[^0-9a-zA-Z]", "_", effective_hostname)
55        options_file = os.path.join("scons",mangledhostname+"_options.py")
56    
57    if not os.path.isfile(options_file):
58      print "Options file not found (expected '%s')" % options_file
59      options_file = False
60    else:
61      print "Options file is", options_file
62    
63    #Does our scons support the newer Variables class or do we need to use Options?
64    
65    try:
66       dummyvar=Variables
67       opts = Variables(options_file, ARGUMENTS)
68       adder = opts.AddVariables
69    except:
70       opts = Options(options_file, ARGUMENTS)
71       adder = opts.AddOptions
72       BoolVariable = BoolOption
73    
74  if os.path.isdir(netCDF_path_default) and os.path.isdir(netCDF_lib_path_default):  ############ Load build options ################################
      useNetCDF_default='yes'  
      netCDF_libs_default=[ 'netcdf_c++', 'netcdf' ]  
 else:  
      useNetCDF_default='no'  
      netCDF_path_default=None  
      netCDF_lib_path_default=None  
      netCDF_libs_default=None  
75    
76  #==========================================================================  adder(
77  #  #opts.AddOptions(
 #  MPI:  
 #  
 if IS_WINDOWS_PLATFORM:  
    useMPI_default='no'  
    mpi_path_default=None  
    mpi_lib_path_default=None  
    mpi_libs_default=[]  
    mpi_run_default=None  
 else:  
    useMPI_default='no'  
    mpi_root='/usr/local'  
    mpi_path_default=os.path.join(mpi_root,'include')  
    mpi_lib_path_default=os.path.join(mpi_root,'lib')  
    mpi_libs_default=[ 'mpich' , 'pthread', 'rt' ]  
    mpi_run_default='mpiexec -np 1'  
 #  
 #==========================================================================  
 #  
 #    compile:  
 #  
 cc_flags_default='-O3 -std=c99 -ffast-math -fpic -Wno-unknown-pragmas -ansi'  
 cc_flags_debug_default='-g -O0 -ffast-math -std=c99 -fpic -Wno-unknown-pragmas -ansi'  
 cxx_flags_default='--no-warn -ansi'  
 cxx_flags_debug_default='--no-warn -ansi -DDOASSERT'  
   
 #==============================================================================================      
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 opts.AddOptions(  
78  # Where to install esys stuff  # Where to install esys stuff
79    ('incinstall', 'where the esys headers will be installed',             Dir('#.').abspath+'/include'),    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),
80    ('libinstall', 'where the esys libraries will be installed',           dir_libraries),    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),
81    ('pyinstall', 'where the esys python modules will be installed',       dir_packages),    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),
82    ('exinstall', 'where the esys examples will be installed',             dir_examples),    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),
83    ('sys_libinstall', 'where the system esys libraries will be installed',       sys_dir_libraries),    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),
   ('sys_pyinstall', 'where the system esys python modules will be installed',   sys_dir_packages),  
   ('sys_exinstall', 'where the system esys examples will be installed',         sys_dir_examples),  
   ('src_zipfile', 'the source zip file will be installed.',              Dir('#.').abspath+"/release/escript_src.zip"),  
   ('test_zipfile', 'the test zip file will be installed.',               Dir('#.').abspath+"/release/escript_tests.zip"),  
   ('src_tarfile', 'the source tar file will be installed.',              Dir('#.').abspath+"/release/escript_src.tar.gz"),  
   ('test_tarfile', 'the test tar file will be installed.',               Dir('#.').abspath+"/release/escript_tests.tar.gz"),  
   ('examples_tarfile', 'the examples tar file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.tar.gz"),  
   ('examples_zipfile', 'the examples zip file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.zip"),  
   ('guide_pdf', 'name of the user guide in pdf format',                  Dir('#.').abspath+"/release/doc/user/guide.pdf"),  
   ('api_epydoc', 'name of the epydoc api docs directory',                Dir('#.').abspath+"/release/doc/epydoc"),  
   ('guide_html', 'name of the directory for user guide in html format',  Dir('#.').abspath+"/release/doc/user/html"),  
   ('api_doxygen', 'name of the doxygen api docs directory',prefix+"/release/doc/doxygen"),  
84  # Compilation options  # Compilation options
85    BoolOption('dodebug', 'Do you want a debug build?', 'no'),    BoolVariable('dodebug', 'For backwards compatibility', 'no'),
86    BoolOption('bounds_check', 'Do you want extra array bounds checking?', 'no'),    BoolVariable('usedebug', 'Do you want a debug build?', 'no'),
87    ('options_file', "Optional file containing preferred options. Ignored if it doesn't exist (default: scons/<hostname>_options.py)", options_file),    BoolVariable('usevtk', 'Do you want to use VTK?', 'yes'),
88    ('cc_defines','C/C++ defines to use', None),    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),
89    ('cc_flags','C compiler flags to use (Release build)', cc_flags_default),    ('cc', 'path to C compiler', 'DEFAULT'),
90    ('cc_flags_debug', 'C compiler flags to use (Debug build)', cc_flags_debug_default),    ('cxx', 'path to C++ compiler', 'DEFAULT'),
91    ('cxx_flags', 'C++ compiler flags to use (Release build)', cxx_flags_default),    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),
92    ('cxx_flags_debug', 'C++ compiler flags to use (Debug build)', cxx_flags_debug_default),    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below
93    ('omp_flags', 'OpenMP compiler flags to use (Release build)', ''),    ('cc_flags', 'C/C++ compiler flags to use', '-DEFAULT_1'),
94    ('omp_flags_debug', 'OpenMP compiler flags to use (Debug build)', ''),    ('cc_optim', 'C/C++ optimization flags to use', '-DEFAULT_2'),
95    ('ar_flags', 'Static library archiver flags to use', None),    ('cc_debug', 'C/C++ debug flags to use', '-DEFAULT_3'),
96    ('sys_libs', 'System libraries to link with', None),    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),
97    ('tar_flags','flags for zip files','-c -z'),    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),
98  # MKL    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),
99    PathOption('mkl_path', 'Path to MKL includes', None),    ('cc_extra', 'Extra C compiler flags', ''),
100    PathOption('mkl_lib_path', 'Path to MKL libs', None),    ('cxx_extra', 'Extra C++ compiler flags', ''),
101    ('mkl_libs', 'MKL libraries to link with', None),    ('ld_extra', 'Extra linker flags', ''),
102  # SCSL    ('sys_libs', 'System libraries to link with', []),
103    PathOption('scsl_path', 'Path to SCSL includes', None),    ('ar_flags', 'Static library archiver flags to use', ''),
104    PathOption('scsl_lib_path', 'Path to SCSL libs', None),    BoolVariable('useopenmp', 'Compile parallel version using OpenMP', 'no'),
105    ('scsl_libs', 'SCSL libraries to link with', None),    BoolVariable('usepedantic', 'Compile with -pedantic if using gcc', 'no'),
106    ('scsl_libs_MPI', 'SCSL libraries to link with for MPI build', None),    BoolVariable('usewarnings','Compile with warnings as errors if using gcc','yes'),
107  # UMFPACK    ('forcelazy','for testing use only - set the default value for autolazy','leave_alone'),
108    PathOption('ufc_path', 'Path to UFconfig includes', ufc_path_default),    ('forcecollres','for testing use only - set the default value for force resolving collective ops','leave_alone'),
   PathOption('umf_path', 'Path to UMFPACK includes', umf_path_default),  
   PathOption('umf_lib_path', 'Path to UMFPACK libs', umf_lib_path_default),  
   ('umf_libs', 'UMFPACK libraries to link with', umf_libs_default),  
 # AMD (used by UMFPACK)  
   PathOption('amd_path', 'Path to AMD includes', amd_path_default),  
   PathOption('amd_lib_path', 'Path to AMD libs', amd_lib_path_default),  
   ('amd_libs', 'AMD libraries to link with', amd_libs_default),  
 # TRILINOS  
   PathOption('trilinos_path', 'Path to TRILINOS includes', None),  
   PathOption('trilinos_lib_path', 'Path to TRILINOS libs', None),  
   ('trilinos_libs', 'TRILINOS libraries to link with', None),  
 # BLAS  
   PathOption('blas_path', 'Path to BLAS includes', None),  
   PathOption('blas_lib_path', 'Path to BLAS libs', None),  
   ('blas_libs', 'BLAS libraries to link with', None),  
 # netCDF  
   ('useNetCDF', 'switch on/off the usage of netCDF', useNetCDF_default),  
   PathOption('netCDF_path', 'Path to netCDF includes', netCDF_path_default),  
   PathOption('netCDF_lib_path', 'Path to netCDF libs', netCDF_lib_path_default),  
   ('netCDF_libs', 'netCDF C++ libraries to link with', netCDF_libs_default),  
109  # Python  # Python
110  # locations of include files for python    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),
111  # FIXME: python_path should be python_inc_path and the same for boost etc.    ('python_lib_path', 'Path to Python libs', usr_lib),
112    PathOption('python_path', 'Path to Python includes', python_path_default),    ('python_libs', 'Python libraries to link with', [python_version]),
   PathOption('python_lib_path', 'Path to Python libs', python_lib_path_default),  
   ('python_lib', 'Python libraries to link with', python_lib_default),  
113    ('python_cmd', 'Python command', 'python'),    ('python_cmd', 'Python command', 'python'),
114  # Boost  # Boost
115    PathOption('boost_path', 'Path to Boost includes', boost_path_default),    ('boost_path', 'Path to Boost includes', '/usr/include'),
116    PathOption('boost_lib_path', 'Path to Boost libs', boost_lib_path_default),    ('boost_lib_path', 'Path to Boost libs', usr_lib),
117    ('boost_lib', 'Boost libraries to link with', boost_lib_default),    ('boost_libs', 'Boost libraries to link with', ['boost_python']),
118  # Doc building  # NetCDF
119  #  PathOption('doxygen_path', 'Path to Doxygen executable', None),    BoolVariable('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),
120  #  PathOption('epydoc_path', 'Path to Epydoc executable', None),    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),
121  # PAPI    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),
122    PathOption('papi_path', 'Path to PAPI includes', None),    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),
   PathOption('papi_lib_path', 'Path to PAPI libs', None),  
   ('papi_libs', 'PAPI libraries to link with', None),  
   ('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', None),  
123  # MPI  # MPI
124    BoolOption('useMPI', 'Compile parallel version using MPI', useMPI_default),    BoolVariable('useMPI', 'For backwards compatibility', 'no'),
125      BoolVariable('usempi', 'Compile parallel version using MPI', 'no'),
126    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),
127    PathOption('mpi_path', 'Path to MPI includes', mpi_path_default),    ('mpi_path', 'Path to MPI includes', '/usr/include'),
128    ('mpi_run', 'mpirun name' , mpi_run_default),    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),
129    PathOption('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)',mpi_lib_path_default),    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),
130    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', mpi_libs_default)    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', []),
131      ('mpi_flavour','Type of MPI execution environment','none'),
132    # ParMETIS
133      BoolVariable('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),
134      ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),
135      ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),
136      ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),
137    # PAPI
138      BoolVariable('usepapi', 'switch on/off the usage of PAPI', 'no'),
139      ('papi_path', 'Path to PAPI includes', '/usr/include'),
140      ('papi_lib_path', 'Path to PAPI libs', usr_lib),
141      ('papi_libs', 'PAPI libraries to link with', ['papi']),
142      BoolVariable('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),
143    # MKL
144      BoolVariable('usemkl', 'switch on/off the usage of MKL', 'no'),
145      ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),
146      ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),
147      ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),
148    # UMFPACK
149      BoolVariable('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),
150      ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),
151      ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),
152      ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),
153      ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),
154    # Silo
155      BoolVariable('usesilo', 'switch on/off the usage of Silo', 'yes'),
156      ('silo_path', 'Path to Silo includes', '/usr/include'),
157      ('silo_lib_path', 'Path to Silo libs', usr_lib),
158      ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
159    # AMD (used by UMFPACK)
160      ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),
161      ('amd_lib_path', 'Path to AMD libs', usr_lib),
162      ('amd_libs', 'AMD libraries to link with', ['amd']),
163    # BLAS (used by UMFPACK)
164      ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),
165      ('blas_lib_path', 'Path to BLAS libs', usr_lib),
166      ('blas_libs', 'BLAS libraries to link with', ['blas']),
167    #Lapack options
168      BoolVariable('uselapack','switch on/off use of Lapack','no'),
169      ('lapack_path', 'Path to Lapack includes','/usr/include'),
170      ('lapack_lib_path', 'Path to Lapack libs', usr_lib),
171      ('lapack_libs', 'Lapack libraries to link with', []),
172      ('lapack_type', '{clapack,mkl}','clapack'),
173    # An option for specifying the compiler tools set (see windows branch).
174      ('tools_names', 'allow control over the tools in the env setup', ['default']),
175    # finer control over library building, intel aggressive global optimisation
176    # works with dynamic libraries on windows.
177      ('share_esysUtils', 'control static or dynamic esysUtils lib', False),
178      ('share_paso', 'control static or dynamic paso lib', False),
179      ('env_export','Environment variables to be passed to children',[]),
180    #To enable passing function pointers through python
181      BoolVariable('iknowwhatimdoing','allow nonstandard C',False)
182  )  )
183  #=================================================================================================  
184  #  ############ Specify which compilers to use ####################
185  #   Note: On the Altix the intel compilers are not automatically  
186  #   detected by scons intelc.py script. The Altix has a different directory  # intelc uses regular expressions improperly and emits a warning about
187  #   path and in some locations the "modules" facility is used to support  # failing to find the compilers.  This warning can be safely ignored.
 #   multiple compiler versions. This forces the need to import the users PATH  
 #   environment which isn't the "scons way"  
 #   This doesn't impact linux and windows which will use the default compiler (g++ or msvc, or the intel compiler if it is installed on both platforms)  
 #   FIXME: Perhaps a modification to intelc.py will allow better support for ia64 on altix  
 #  
188    
189  if IS_WINDOWS_PLATFORM:  if IS_WINDOWS_PLATFORM:
190        env = Environment(tools = ['default', 'msvc'], options = opts)        env = Environment(options = opts)
191          env = Environment(tools = ['default'] + env['tools_names'],
192                            options = opts)
193  else:  else:
194     if os.uname()[4]=='ia64':      if os.uname()[4]=='ia64':
195        env = Environment(tools = ['default', 'intelc'], options = opts)        env = Environment(tools = ['default', 'intelc'], options = opts)
196        if env['CXX'] == 'icpc':        if env['CXX'] == 'icpc':
197           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not). FIXME: this behaviour could be directly incorporated into scons intelc.py           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)
198     else:     else:
199        env = Environment(tools = ['default'], options = opts)        env = Environment(tools = ['default'], options = opts)
200  Help(opts.GenerateHelpText(env))        if env['tools_names']!='default':
201        env=Environment(tools = ['default'] +env['tools_names'], options=opts)
202    
 if env['bounds_check']:  
    env.Append(CPPDEFINES = [ 'BOUNDS_CHECK' ])  
    env.Append(CXXDEFINES = [ 'BOUNDS_CHECK' ])  
    bounds_check = env['bounds_check']  
 else:  
    bounds_check = 0  
203    
 #=================================================================================================  
 #  
 #     Initialise Scons Build Environment  
 #     check for user environment variables we are interested in  
 try:  
    tmp = os.environ['PYTHONPATH']  
    env['ENV']['PYTHONPATH'] = tmp  
 except KeyError:  
    pass  
204    
 env.PrependENVPath('PYTHONPATH', source_root)  
205    
206  try:  # Override compiler choice if provided
207     omp_num_threads = os.environ['OMP_NUM_THREADS']  if env['cc'] != 'DEFAULT': env['CC']=env['cc']
208  except KeyError:  if env['cxx'] != 'DEFAULT': env['CXX']=env['cxx']
    omp_num_threads = 1  
 env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  
209    
210  try:  Help(opts.GenerateHelpText(env))
    path = os.environ['PATH']  
    env['ENV']['PATH'] = path  
 except KeyError:  
    omp_num_threads = 1  
211    
212  env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  ############ Make sure target directories exist ################
213    
214    if not os.path.isdir(env['bininstall']):
215        os.makedirs(env['bininstall'])
216    if not os.path.isdir(env['libinstall']):
217        os.makedirs(env['libinstall'])
218    if not os.path.isdir(env['pyinstall']):
219        os.makedirs(env['pyinstall'])
220    
221    ########## Copy required environment vars ######################
222    
223    for i in env['env_export']:
224       env.Append(ENV = {i:os.environ[i]})
225    
226    ############ Fill in compiler options if not set above #########
227    
228    # Backwards compatibility: allow dodebug=yes and useMPI=yes
229    if env['dodebug']: env['usedebug'] = 1
230    if env['useMPI']: env['usempi'] = 1
231    
232    # Default compiler options (override allowed in hostname_options.py, but should not be necessary)
233    # For both C and C++ you get: cc_flags and either the optim flags or debug flags
234    
235    sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.
236    
237    cc_flags = ""
238    cc_optim = ""
239    cc_debug = ""
240    omp_optim = ""
241    omp_debug = ""
242    omp_libs = []
243    
244    if env["CC"] == "icc":
245      # Intel compilers
246      cc_flags      = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
247      cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"
248      cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
249      omp_optim     = "-openmp -openmp_report0"
250      omp_debug     = "-openmp -openmp_report0"
251      omp_libs      = ['guide', 'pthread']
252      pedantic      = ""
253      fatalwarning      = ""        # Switch to turn warnings into errors
254      sysheaderopt      = ""
255    elif env["CC"][:3] == "gcc":
256      # GNU C on any system
257      cc_flags      = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"
258    #the long long warning occurs on the Mac
259      cc_optim      = "-O3"
260      cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
261      omp_optim     = "-fopenmp"
262      omp_debug     = "-fopenmp"
263      omp_libs      = []
264      pedantic      = "-pedantic-errors -Wno-long-long"
265      fatalwarning      = "-Werror"
266      sysheaderopt      = "-isystem "
267    elif env["CC"] == "cl":
268      # Microsoft Visual C on Windows
269      cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"
270      cc_optim      = "/O2 /Op /MT /W3"
271      cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"
272      omp_optim     = ""
273      omp_debug     = ""
274      omp_libs      = []
275      pedantic      = ""
276      fatalwarning      = ""
277      sysheaderopt      = ""
278    elif env["CC"] == "icl":
279      # intel C on Windows, see windows_intelc_options.py for a start
280      pedantic      = ""
281      fatalwarning      = ""
282      sysheaderopt      = ""
283    
284    
285    # If not specified in hostname_options.py then set them here
286    if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags
287    if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim
288    if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug
289    if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim
290    if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug
291    if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs
292    
293    #set up the autolazy values
294    if env['forcelazy']    != "leave_alone":
295      if env['forcelazy'] == 'on':
296        env.Append(CPPDEFINES=['FAUTOLAZYON'])
297      else:
298         if env['forcelazy'] == 'off':
299        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
300    
301    #set up the colective resolve values
302    if env['forcecollres']    != "leave_alone":
303      print env['forcecollres']
304      if env['forcecollres'] == 'on':
305        env.Append(CPPDEFINES=['FRESCOLLECTON'])
306      else:
307         if env['forcecollres'] == 'off':
308        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
309    
310    
311    if env['iknowwhatimdoing']:
312        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
313    
314    # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty
315    if not env["useopenmp"]:
316      env['omp_optim'] = ""
317      env['omp_debug'] = ""
318      env['omp_libs'] = []
319    
320  # Copy some variables from the system environment to the build environment  if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0
 try:  
    env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
    env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
    home_temp = os.environ['HOME']   # MPICH2's mpd needs $HOME to find $HOME/.mpd.conf  
    env['ENV']['HOME'] = home_temp  
 except KeyError:  
    pass  
321    
322  try:  # Windows doesn't use LD_LIBRARY_PATH but PATH instead
323     tmp = os.environ['PATH']  if IS_WINDOWS_PLATFORM:
324     env['ENV']['PATH'] = tmp      LD_LIBRARY_PATH_KEY='PATH'
325  except KeyError:      env['ENV']['LD_LIBRARY_PATH']=''
326     pass  else:
327        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
328    ############ Copy environment variables into scons env #########
329    
330  try:  try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']
331     tmp = os.environ['LD_LIBRARY_PATH']  except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1
    print tmp  
    env['ENV']['LD_LIBRARY_PATH'] = tmp  
 except KeyError:  
    pass  
 #==========================================================================  
 #  
 #    Add some customer builders  
 #  
 py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  
 env.Append(BUILDERS = {'PyCompile' : py_builder});  
332    
333  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed',  try: env['ENV']['ESCRIPT_NUM_THREADS'] = os.environ['ESCRIPT_NUM_THREADS']
334                                src_suffix=env['PROGSUFFIX'], single_source=True)  except KeyError: pass
335    
336  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  try: env['ENV']['ESCRIPT_NUM_PROCS'] = os.environ['ESCRIPT_NUM_PROCS']
337    except KeyError: env['ENV']['ESCRIPT_NUM_PROCS']=1
338    
339  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  try: env['ENV']['ESCRIPT_NUM_NODES'] = os.environ['ESCRIPT_NUM_NODES']
340  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  except KeyError: env['ENV']['ESCRIPT_NUM_NODES']=1
341    
342  # Convert the options which are held in environment variable into python variables for ease of handling and configure compilation options  try: env['ENV']['ESCRIPT_HOSTFILE'] = os.environ['ESCRIPT_HOSTFILE']
343  try:  except KeyError: pass
    incinstall = env['incinstall']  
    env.Append(CPPPATH = [incinstall,])  
 except KeyError:  
    incinstall = None  
 try:  
    libinstall = env['libinstall']  
    env.Append(LIBPATH = [libinstall,]) # Adds -L for building of libescript.so libfinley.so escriptcpp.so finleycpp.so  
    env.PrependENVPath('LD_LIBRARY_PATH', libinstall)  
    if IS_WINDOWS_PLATFORM :  
       env.PrependENVPath('PATH', libinstall)  
       env.PrependENVPath('PATH', env['boost_lib_path'])  
 except KeyError:  
    libinstall = None  
 try:  
    pyinstall = env['pyinstall'] # all targets will install into pyinstall/esys but PYTHONPATH points at straight pyinstall so you go import esys.escript etc  
 except KeyError:  
    pyinstall = None  
344    
345  try:  try: env['ENV']['PATH'] = os.environ['PATH']
346     cc_defines = env['cc_defines']  except KeyError: pass
    env.Append(CPPDEFINES = cc_defines)  
 except KeyError:  
    pass  
 try:  
    flags = env['ar_flags']  
    env.Append(ARFLAGS = flags)  
 except KeyError:  
    ar_flags = None  
 try:  
    sys_libs = env['sys_libs']  
 except KeyError:  
    sys_libs = []  
347    
348  try:  try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
349     tar_flags = env['tar_flags']  except KeyError: pass
    env.Replace(TARFLAGS = tar_flags)  
 except KeyError:  
    pass  
350    
351  try:  try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']
352     exinstall = env['exinstall']  except KeyError: pass
 except KeyError:  
    exinstall = None  
 try:  
    sys_libinstall = env['sys_libinstall']  
 except KeyError:  
    sys_libinstall = None  
 try:  
    sys_pyinstall = env['sys_pyinstall']  
 except KeyError:  
    sys_pyinstall = None  
 try:  
    sys_exinstall = env['sys_exinstall']  
 except KeyError:  
    sys_exinstall = None  
353    
354  # ====================== debugging ===================================  try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']
355  try:  except KeyError: pass
    dodebug = env['dodebug']  
 except KeyError:  
    dodebug = None  
356    
357  # === switch on omp ===================================================  try: env.PrependENVPath(LD_LIBRARY_PATH_KEY,os.environ['LD_LIBRARY_PATH'])
358  try:  except KeyError: pass
   omp_flags = env['omp_flags']  
 except KeyError:  
   omp_flags = ''  
359    
360  try:  try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']
361    omp_flags_debug = env['omp_flags_debug']  except KeyError: pass
 except KeyError:  
   omp_flags_debug = ''  
362    
363  # ========= use mpi? =====================================================  try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']
364  try:  except KeyError: pass
    useMPI = env['useMPI']  
 except KeyError:  
    useMPI = None  
 # ========= set compiler flags ===========================================  
   
 # Can't use MPI and OpenMP simultaneously at this time  
 if useMPI:  
     omp_flags=''  
     omp_flags_debug=''  
   
 if dodebug:  
     try:  
       flags = env['cc_flags_debug'] + ' ' + omp_flags_debug  
       env.Append(CCFLAGS = flags)  
     except KeyError:  
       pass  
 else:  
    try:  
       flags = env['cc_flags'] + ' ' + omp_flags  
       env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
 if dodebug:  
      try:  
         flags = env['cxx_flags_debug']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 else:  
      try:  
         flags = env['cxx_flags']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 try:  
      if env['CC'] == 'gcc': env.Append(CCFLAGS = "-pedantic-errors -Wno-long-long")  
 except:  
      pass  
365    
366  # ============= Remember what options were used in the compile =====================================  try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']
367  if not IS_WINDOWS_PLATFORM:  except KeyError: pass
   env.Execute("/bin/rm -f " + libinstall + "/Compiled.with.*")  
   if dodebug:       env.Execute("touch " + libinstall + "/Compiled.with.debug")  
   if useMPI:        env.Execute("touch " + libinstall + "/Compiled.with.mpi")  
   if omp_flags != '':   env.Execute("touch " + libinstall + "/Compiled.with.OpenMP")  
   if bounds_check:  env.Execute("touch " + libinstall + "/Compiled.with.bounds_check")  
368    
369  # ============= set mkl (but only of no MPI) =====================================  try: env['ENV']['HOME'] = os.environ['HOME']
370  if not useMPI:  except KeyError: pass
    try:  
       includes = env['mkl_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
371    
372     try:  # Configure for test suite
       lib_path = env['mkl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
373    
    try:  
       mkl_libs = env['mkl_libs']  
    except KeyError:  
       mkl_libs = []  
 else:  
      mkl_libs = []  
374    
375  # ============= set scsl (but only of no MPI) =====================================  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
376  if not useMPI:  env.PrependENVPath('PYTHONPATH', prefix)
377     try:  env['ENV']['ESCRIPT_ROOT'] = prefix
       includes = env['scsl_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
378    
379     try:  ############ Set up paths for Configure() ######################
       lib_path = env['scsl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
     
    try:  
       scsl_libs = env['scsl_libs']  
    except KeyError:  
       scsl_libs = [ ]  
380    
381  else:  # Make a copy of an environment
382      scsl_libs =  []  # Use env.Clone if available, but fall back on env.Copy for older version of scons
383    def clone_env(env):
384      if 'Clone' in dir(env): return env.Clone()    # scons-0.98
385      else:                   return env.Copy() # scons-0.96
386    
387  # ============= set TRILINOS (but only with MPI) =====================================  # Add cc option -I<Escript>/trunk/include
388  if useMPI:  env.Append(CPPPATH      = [Dir('include')])
    try:  
       includes = env['trilinos_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
389    
390     try:  # Add cc option -L<Escript>/trunk/lib
391        lib_path = env['trilinos_lib_path']  env.Append(LIBPATH      = [Dir(env['libinstall'])])
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
392    
393     try:  if env['cc_extra'] != '': env.Append(CFLAGS = env['cc_extra'])
394        trilinos_libs = env['trilinos_libs']  if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
395     except KeyError:  if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])
       trilinos_libs = []  
 else:  
      trilinos_libs = []  
396    
397    if env['usepedantic']: env.Append(CCFLAGS = pedantic)
398    
399  # ============= set umfpack (but only without MPI) =====================================  # MS Windows
400  umf_libs=[ ]  if IS_WINDOWS_PLATFORM:
401  if not useMPI:    env.AppendENVPath('PATH', [env['boost_lib_path']])
402     try:    env.AppendENVPath('PATH', [env['libinstall']])
403        includes = env['umf_path']    if not env['share_esysUtils'] :
404        env.Append(CPPPATH = [includes,])      env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
405     except KeyError:    if not env['share_paso'] :
406        pass      env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
407    
408      if env['usenetcdf']:
409        env.AppendENVPath('PATH',   [env['netCDF_lib_path']])
410    
411     try:  env.Append(ARFLAGS = env['ar_flags'])
       lib_path = env['umf_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
412    
413     try:  # Get the global Subversion revision number for getVersion() method
414        umf_libs = env['umf_libs']  try:
415        umf_libs+=umf_libs     global_revision = os.popen("svnversion -n .").read()
416     except KeyError:     global_revision = re.sub(":.*", "", global_revision)
417        pass     global_revision = re.sub("[^0-9]", "", global_revision)
418    except:
419       global_revision="-1"
420    if global_revision == "": global_revision="-2"
421    env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])
422    
423     try:  ############ numpy (required) ###############################
       includes = env['ufc_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
424    
425     try:  try:
426        includes = env['amd_path']    from numpy import identity
427        env.Append(CPPPATH = [includes,])  except ImportError:
428     except KeyError:    print "Cannot import numpy, you need to set your PYTHONPATH"
429        pass    sys.exit(1)
430    
431     try:  ############ C compiler (required) #############################
       lib_path = env['amd_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
432    
433     try:  # Create a Configure() environment for checking existence of required libraries and headers
434        amd_libs = env['amd_libs']  conf = Configure(clone_env(env))
       umf_libs+=amd_libs  
    except KeyError:  
       pass  
435    
436  # ============= set TRILINOS (but only with MPI) =====================================  # Test that the compiler is working
437  if useMPI:  if not conf.CheckFunc('printf'):
438     try:     print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])
439        includes = env['trilinos_path']     sys.exit(1)
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
440    
441     try:  if conf.CheckFunc('gethostname'):
442        lib_path = env['trilinos_lib_path']    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
443    
444     try:  ############ python libraries (required) #######################
       trilinos_libs = env['trilinos_libs']  
    except KeyError:  
       trilinos_libs = []  
 else:  
      trilinos_libs = []  
445    
 # ============= set blas =====================================  
 try:  
    includes = env['blas_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
446    
447  try:  if not sysheaderopt =="":
448     lib_path = env['blas_lib_path']    conf.env.Append(CCFLAGS=sysheaderopt+env['python_path'])
449     env.Append(LIBPATH = [lib_path,])  else:
450  except KeyError:    conf.env.AppendUnique(CPPPATH     = [env['python_path']])
    pass  
451    
452  try:  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])
453     blas_libs = env['blas_libs']  conf.env.AppendUnique(LIBS      = [env['python_libs']])
 except KeyError:  
    blas_libs = [ ]  
454    
455  # ========== netcdf ====================================  conf.env.PrependENVPath('PYTHONPATH', prefix)
456  try:  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['python_lib_path'])    # The wrapper script needs to find these libs
457     useNetCDF = env['useNetCDF']  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
 except KeyError:  
    useNetCDF = 'yes'  
    pass  
       
 if useNetCDF == 'yes':  
    try:  
       netCDF_libs = env['netCDF_libs']  
    except KeyError:  
       pass  
458    
459     env.Append(LIBS = netCDF_libs)  if not conf.CheckCHeader('Python.h'):
460     env.Append(CPPDEFINES = [ 'USE_NETCDF' ])    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])
461     try:    sys.exit(1)
462        includes = env['netCDF_path']  if not conf.CheckFunc('Py_Exit'):
463        env.Append(CPPPATH = [includes,])    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])
464     except KeyError:    sys.exit(1)
       pass  
465    
466     try:  ############ boost (required) ##################################
467        lib_path = env['netCDF_lib_path']  
468        env.Append(LIBPATH = [ lib_path, ])  if not sysheaderopt =="":
469        env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  # This is required because we can't -isystem /usr/system because it breaks std includes
470        if IS_WINDOWS_PLATFORM :    if os.path.normpath(env['boost_path']) =="/usr/include":
471           env.PrependENVPath('PATH', lib_path)      conf.env.Append(CCFLAGS=sysheaderopt+os.path.join(env['boost_path'],'boost'))
472     except KeyError:    else:
473        pass      conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path'])
474  else:  else:
475     print "Warning: Installation is not configured with netCDF. Some I/O function may not be available."    conf.env.AppendUnique(CPPPATH     = [env['boost_path']])
    netCDF_libs=[ ]  
476    
477  # ====================== boost ======================================  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])
478  try:  conf.env.AppendUnique(LIBS      = [env['boost_libs']])
    includes = env['boost_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['boost_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
    env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    if IS_WINDOWS_PLATFORM :  
       env.PrependENVPath('PATH', lib_path)  
 except KeyError:  
    pass  
 try:  
    boost_lib = env['boost_lib']  
 except KeyError:  
    boost_lib = None  
 # ====================== python ======================================  
 try:  
    includes = env['python_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['python_lib_path']  
    env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    python_lib = env['python_lib']  
 except KeyError:  
    python_lib = None  
 # =============== documentation =======================================  
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 # =============== PAPI =======================================  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 # ============= set mpi =====================================  
 if useMPI:  
    env.Append(CPPDEFINES=['PASO_MPI',])  
    try:  
       includes = env['mpi_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
    try:  
       lib_path = env['mpi_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
    try:  
       mpi_libs = env['mpi_libs']  
    except KeyError:  
       mpi_libs = []  
479    
480     try:  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['boost_lib_path']) # The wrapper script needs to find these libs
481        mpi_run = env['mpi_run']  #ensure that our path entries remain at the front
482     except KeyError:  conf.env.PrependENVPath('PYTHONPATH', prefix)
483        mpi_run = ''  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
484    
    try:  
        mpich_ignore_cxx_seek=env['MPICH_IGNORE_CXX_SEEK']  
        env.Append(CPPDEFINES = [ mpich_ignore_cxx_seek ] )  
    except KeyError:  
       pass  
 else:  
   mpi_libs=[]  
   mpi_run = mpi_run_default  
 # =========== zip files ===========================================  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 try:  
    papi_instrument_solver = env['papi_instrument_solver']  
 except KeyError:  
    papi_instrument_solver = None  
485    
486    #Yep we still cant figure this one out. - working on it.
487    if not IS_WINDOWS_PLATFORM:
488      if not conf.CheckCXXHeader('boost/python.hpp'):
489        print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])
490        sys.exit(1)
491    
492      if not conf.CheckFunc('PyObject_SetAttr'):
493        print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])
494        sys.exit(1)
495    
496    
497    # Commit changes to environment
498    env = conf.Finish()
499    
500    ############ VTK (optional) ####################################
501    
502    if env['usevtk']:
503      try:
504        import vtk
505        env['usevtk'] = 1
506      except ImportError:
507        env['usevtk'] = 0
508    
509    # Add VTK to environment env if it was found
510    if env['usevtk']:
511      env.Append(CPPDEFINES = ['USE_VTK'])
512    
513    ############ NetCDF (optional) #################################
514    
515    conf = Configure(clone_env(env))
516    
517    if env['usenetcdf']:
518      conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])
519      conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])
520      conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])
521      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['netCDF_lib_path'])  # The wrapper script needs to find these libs
522      #ensure that our path entries remain at the front
523      conf.env.PrependENVPath('PYTHONPATH', prefix)
524      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
525    
526    if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0
527    if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0
528    
529    # Add NetCDF to environment env if it was found
530    if env['usenetcdf']:
531      env = conf.Finish()
532      env.Append(CPPDEFINES = ['USE_NETCDF'])
533    else:
534      conf.Finish()
535    
536    ############ PAPI (optional) ###################################
537    
538    # Start a new configure environment that reflects what we've already found
539    conf = Configure(clone_env(env))
540    
541    if env['usepapi']:
542      conf.env.AppendUnique(CPPPATH = [env['papi_path']])
543      conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])
544      conf.env.AppendUnique(LIBS    = [env['papi_libs']])
545      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['papi_lib_path'])    # The wrapper script needs to find these libs
546      #ensure that our path entries remain at the front
547      conf.env.PrependENVPath('PYTHONPATH', prefix)
548      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
549    
550    if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0
551    if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0
552    
553    # Add PAPI to environment env if it was found
554    if env['usepapi']:
555      env = conf.Finish()
556      env.Append(CPPDEFINES = ['BLOCKPAPI'])
557    else:
558      conf.Finish()
559    
560    ############ MKL (optional) ####################################
561    
562    # Start a new configure environment that reflects what we've already found
563    conf = Configure(clone_env(env))
564    
565    if env['usemkl']:
566      conf.env.AppendUnique(CPPPATH = [env['mkl_path']])
567      conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])
568      conf.env.AppendUnique(LIBS    = [env['mkl_libs']])
569      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['mkl_lib_path']) # The wrapper script needs to find these libs
570      #ensure that our path entries remain at the front
571      conf.env.PrependENVPath('PYTHONPATH', prefix)
572      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
573    
574    if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0
575    if env['usemkl'] and not conf.CheckFunc('pardiso'): env['usemkl'] = 0
576    
577    
578    # Add MKL to environment env if it was found
579    if env['usemkl']:
580      env = conf.Finish()
581      env.Append(CPPDEFINES = ['MKL'])
582    else:
583      conf.Finish()
584    
585    ############ UMFPACK (optional) ################################
586    
587    # Start a new configure environment that reflects what we've already found
588    conf = Configure(clone_env(env))
589    
590    if env['useumfpack']:
591      conf.env.AppendUnique(CPPPATH = [env['ufc_path']])
592      conf.env.AppendUnique(CPPPATH = [env['umf_path']])
593      conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])
594      conf.env.AppendUnique(LIBS    = [env['umf_libs']])
595      conf.env.AppendUnique(CPPPATH = [env['amd_path']])
596      conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])
597      conf.env.AppendUnique(LIBS    = [env['amd_libs']])
598      conf.env.AppendUnique(CPPPATH = [env['blas_path']])
599      conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])
600      conf.env.AppendUnique(LIBS    = [env['blas_libs']])
601      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['umf_lib_path']) # The wrapper script needs to find these libs
602      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['amd_lib_path']) # The wrapper script needs to find these libs
603      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['blas_lib_path'])    # The wrapper script needs to find these libs
604      #ensure that our path entries remain at the front
605      conf.env.PrependENVPath('PYTHONPATH', prefix)
606      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
607    
608    if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0
609    if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0
610    # if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?
611    
612    # Add UMFPACK to environment env if it was found
613    if env['useumfpack']:
614      env = conf.Finish()
615      env.Append(CPPDEFINES = ['UMFPACK'])
616    else:
617      conf.Finish()
618    
619    ############ Silo (optional) ###################################
620    
621    if env['usesilo']:
622      conf = Configure(clone_env(env))
623      conf.env.AppendUnique(CPPPATH = [env['silo_path']])
624      conf.env.AppendUnique(LIBPATH = [env['silo_lib_path']])
625      conf.env.AppendUnique(LIBS = [env['silo_libs']])
626      if not conf.CheckCHeader('silo.h'): env['usesilo'] = 0
627      if not conf.CheckFunc('DBMkDir'): env['usesilo'] = 0
628      conf.Finish()
629    
630    # Add the path to Silo to environment env if it was found.
631    # Note that we do not add the libs since they are only needed for the
632    # weipa library and tools.
633    if env['usesilo']:
634      env.AppendUnique(CPPPATH = [env['silo_path']])
635      env.AppendUnique(LIBPATH = [env['silo_lib_path']])
636    
637    ########### Lapack (optional) ##################################
638    
639    if env['uselapack']:
640        env.AppendUnique(CPPDEFINES='USE_LAPACK')
641        env.AppendUnique(CPPPATH = [env['lapack_path']])
642        env.AppendUnique(LIBPATH =[env['lapack_lib_path']])
643    
644        env.Append(LIBPATH = '/usr/lib/atlas')
645        env.Append(LIBS = [env['lapack_libs']])
646        if env['lapack_type']=='mkl':
647           if not env['usemkl']:
648            env['uselapack']=0
649            print "mkl_lapack requires mkl"
650           else:
651            env.AppendUnique(CPPDEFINES='MKL_LAPACK')
652          
653    
654    ############ Add the compiler flags ############################
655    
656    # Enable debug by choosing either cc_debug or cc_optim
657    if env['usedebug']:
658      env.Append(CCFLAGS        = env['cc_debug'])
659      env.Append(CCFLAGS        = env['omp_debug'])
660    else:
661      env.Append(CCFLAGS        = env['cc_optim'])
662      env.Append(CCFLAGS        = env['omp_optim'])
663    
664    # Always use cc_flags
665    env.Append(CCFLAGS      = env['cc_flags'])
666    env.Append(LIBS         = [env['omp_libs']])
667    
668  # ============= and some helpers =====================================  ############ Add some custom builders ##########################
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 try:  
    src_zipfile = env.File(env['src_zipfile'])  
 except KeyError:  
    src_zipfile = None  
 try:  
    test_zipfile = env.File(env['test_zipfile'])  
 except KeyError:  
    test_zipfile = None  
 try:  
    examples_zipfile = env.File(env['examples_zipfile'])  
 except KeyError:  
    examples_zipfile = None  
669    
670  try:  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
671     src_tarfile = env.File(env['src_tarfile'])  env.Append(BUILDERS = {'PyCompile' : py_builder});
 except KeyError:  
    src_tarfile = None  
 try:  
    test_tarfile = env.File(env['test_tarfile'])  
 except KeyError:  
    test_tarfile = None  
 try:  
    examples_tarfile = env.File(env['examples_tarfile'])  
 except KeyError:  
    examples_tarfile = None  
672    
673  try:  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
674     guide_pdf = env.File(env['guide_pdf'])  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
 except KeyError:  
    guide_pdf = None  
675    
676  try:  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
677     guide_html_index = env.File('index.htm',env['guide_html'])  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
 except KeyError:  
    guide_html_index = None  
678    
679  try:  epstopdfbuilder = Builder(action = scons_extensions.eps2pdf, suffix=".pdf", src_suffix=".eps", single_source=True)
680     api_epydoc = env.Dir(env['api_epydoc'])  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
 except KeyError:  
    api_epydoc = None  
681    
682  try:  ############ MPI (optional) ####################################
683     api_doxygen = env.Dir(env['api_doxygen'])  if not env['usempi']: env['mpi_flavour']='none'
 except KeyError:  
    api_doxygen = None  
684    
685  try:  # Create a modified environment for MPI programs (identical to env if usempi=no)
686     svn_pipe = os.popen("svnversion -n .")  env_mpi = clone_env(env)
    global_revision = svn_pipe.readlines()  
    svn_pipe.close()  
    global_revision = re.sub(":.*", "", global_revision[0])  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision = "0"  
 env.Append(CPPDEFINES = "SVN_VERSION="+global_revision)  
687    
688  # Python install - esys __init__.py  # Start a new configure environment that reflects what we've already found
689  init_target = env.Command(pyinstall+'/__init__.py', None, Touch('$TARGET'))  conf = Configure(clone_env(env_mpi))
690    
691    if env_mpi['usempi']:
692      VALID_MPIs=[ "MPT", "MPICH", "MPICH2", "OPENMPI", "INTELMPI" ]
693      if not env_mpi['mpi_flavour'] in VALID_MPIs:
694          raise ValueError,"MPI is enabled but mpi_flavour = %s is not a valid key from %s."%( env_mpi['mpi_flavour'],VALID_MPIs)
695      conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])
696      conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])
697      conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])
698      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['mpi_lib_path']) # The wrapper script needs to find these libs
699      #ensure that our path entries remain at the front
700      conf.env.PrependENVPath('PYTHONPATH', prefix)
701      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
702    
703    if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0
704    # if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0
705    
706    # Add MPI to environment env_mpi if it was found
707    if env_mpi['usempi']:
708      env_mpi = conf.Finish()
709      env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])
710      # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
711      # On the other hand MPT and OpenMPI don't define the latter so we have to
712      # do that here
713      if env['usenetcdf'] and env_mpi['mpi_flavour'] in ["MPT","OPENMPI"]:
714        env_mpi.Append(CPPDEFINES = ['MPI_INCLUDED'])
715    else:
716      conf.Finish()
717    
718    env['usempi'] = env_mpi['usempi']
719    
720    ############ ParMETIS (optional) ###############################
721    
722    # Start a new configure environment that reflects what we've already found
723    conf = Configure(clone_env(env_mpi))
724    
725    if not env_mpi['usempi']: env_mpi['useparmetis'] = 0
726    
727    if env_mpi['useparmetis']:
728      conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])
729      conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])
730      conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])
731      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['parmetis_lib_path'])    # The wrapper script needs to find these libs
732      #ensure that our path entries remain at the front
733      conf.env.PrependENVPath('PYTHONPATH', prefix)
734      conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
735    
736    if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0
737    if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0
738    
739    # Add ParMETIS to environment env_mpi if it was found
740    if env_mpi['useparmetis']:
741      env_mpi = conf.Finish()
742      env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])
743    else:
744      conf.Finish()
745    
746    env['useparmetis'] = env_mpi['useparmetis']
747    
748    ############ Summarize our environment #########################
749    
750    print ""
751    print "Summary of configuration (see ./config.log for information)"
752    print " Using python libraries"
753    print " Using numpy"
754    print " Using boost"
755    if env['usenetcdf']: print "    Using NetCDF"
756    else: print "   Not using NetCDF"
757    if env['usevtk']: print "   Using VTK"
758    else: print "   Not using VTK"
759    if env['usemkl']: print "   Using MKL"
760    else: print "   Not using MKL"
761    if env['useumfpack']: print "   Using UMFPACK"
762    else: print "   Not using UMFPACK"
763    if env['usesilo']: print "  Using Silo"
764    else: print "   Not using Silo"
765    if env['useopenmp']: print "    Using OpenMP"
766    else: print "   Not using OpenMP"
767    if env['usempi']: print "   Using MPI (flavour = %s)"%env['mpi_flavour']
768    else: print "   Not using MPI"
769    if env['useparmetis']: print "  Using ParMETIS"
770    else: print "   Not using ParMETIS (requires MPI)"
771    if env['usepapi']: print "  Using PAPI"
772    else: print "   Not using PAPI"
773    if env['uselapack']: print "    Using Lapack"
774    else: print "   Not using Lapack"
775    if env['usedebug']: print " Compiling for debug"
776    else: print "   Not compiling for debug"
777    print " Installing in", prefix
778    if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"
779    else: print "   Not treating warnings as errors"
780    print ""
781    
782    ############ Delete option-dependent files #####################
783    
784    Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.debug")))
785    Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.mpi")))
786    Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.openmp")))
787    Execute(Delete(os.path.join(env['libinstall'],"pyversion")))
788    Execute(Delete(os.path.join(env['libinstall'],"buildvars")))
789    if not env['usempi']: Execute(Delete(os.path.join(env['libinstall'],"pythonMPI")))
790    
791    
792    ############ Build the subdirectories ##########################
793    
794    if env['usepedantic']: env_mpi.Append(CCFLAGS = pedantic)
795    
796    
797    from grouptest import *
798    
799    TestGroups=[]
800    
801    dodgy_env=clone_env(env_mpi)    # Environment without pedantic options
802    
803    ############ Now we switch on Warnings as errors ###############
804    
805    #this needs to be done after configuration because the scons test files have warnings in them
806    
807    if ((fatalwarning != "") and (env['usewarnings'])):
808      env.Append(CCFLAGS        = fatalwarning)
809      env_mpi.Append(CCFLAGS        = fatalwarning)
810    
811    
812    Export(
813      ["env",
814       "env_mpi",
815       "clone_env",
816       "dodgy_env",
817       "IS_WINDOWS_PLATFORM",
818       "TestGroups"
819       ]
820      )
821    
 # FIXME: exinstall and friends related to examples are not working.  
 build_target = env.Alias('build',[libinstall,incinstall,pyinstall,init_target])  
   
 env.Default(build_target)  
   
 # Zipgets  
 env.Alias('release_src',[ src_zipfile, src_tarfile ])  
 env.Alias('release_tests',[ test_zipfile, test_tarfile])  
 env.Alias('release_examples',[ examples_zipfile, examples_tarfile])  
 env.Alias('examples_zipfile',examples_zipfile)  
 env.Alias('examples_tarfile',examples_tarfile)  
 env.Alias('api_epydoc',api_epydoc)  
 env.Alias('api_doxygen',api_doxygen)  
 env.Alias('guide_html_index',guide_html_index)  
 env.Alias('guide_pdf', guide_pdf)  
 env.Alias('docs',[ 'release_examples', 'guide_pdf', api_epydoc, api_doxygen, guide_html_index])  
 env.Alias('release', ['release_src', 'release_tests', 'docs'])  
   
 env.Alias('build_tests',build_target)    # target to build all C++ tests  
 env.Alias('build_py_tests',build_target) # target to build all python tests  
 env.Alias('build_all_tests', [ 'build_tests', 'build_py_tests' ] ) # target to build all python tests  
 env.Alias('run_tests', 'build_tests')   # target to run all C++ test  
 env.Alias('py_tests', 'build_py_tests') # taget to run all released python tests  
 env.Alias('all_tests', ['run_tests', 'py_tests']) # target to run all C++ and released python tests  
   
   
 # Allow sconscripts to see the env  
 Export(["IS_WINDOWS_PLATFORM", "env", "incinstall", "libinstall", "pyinstall", "dodebug", "mkl_libs", "scsl_libs", "umf_libs", "blas_libs", "netCDF_libs", "useNetCDF", "mpi_run",  
     "boost_lib", "python_lib", "doxygen_path", "epydoc_path", "papi_libs",  
         "sys_libs", "test_zipfile", "src_zipfile", "test_tarfile", "src_tarfile", "examples_tarfile", "examples_zipfile", "trilinos_libs", "mpi_libs", "papi_instrument_solver",  
         "guide_pdf", "guide_html_index", "api_epydoc", "api_doxygen", "useMPI" ])  
   
 # End initialisation section  
 # Begin configuration section  
 # adds this file and the scons option directore to the source tar  
 release_srcfiles=[env.File('SConstruct'),env.Dir('lib'),env.Dir('include'),]+[ env.File(x) for x in glob.glob('scons/*.py') ]  
 release_testfiles=[env.File('README_TESTS'),]  
 env.Zip(src_zipfile, release_srcfiles)  
 env.Zip(test_zipfile, release_testfiles)  
 try:  
    env.Tar(src_tarfile, release_srcfiles)  
    env.Tar(test_tarfile, release_testfiles)  
 except AttributeError:  
    pass  
 # Insert new components to be build here  
 # FIXME: might be nice to replace this verbosity with a list of targets and some  
 # FIXME: nifty python to create the lengthy but very similar env.Sconscript lines  
 # Third Party libraries  
822  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)
823  # C/C++ Libraries  env.SConscript(dirs = ['tools/escriptconvert'], build_dir='build/$PLATFORM/tools/escriptconvert', duplicate=0)
824  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)
825  # bruce is removed for now as it doesn't really do anything  env.SConscript(dirs = ['weipa/src'], build_dir='build/$PLATFORM/weipa', duplicate=0)
 # env.SConscript(dirs = ['bruce/src'], build_dir='build/$PLATFORM/bruce', duplicate=0)  
826  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)
827  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)
828  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)
# Line 918  env.SConscript(dirs = ['doc'], build_dir Line 831  env.SConscript(dirs = ['doc'], build_dir
831  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)
832  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)
833  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)
834  #env.SConscript(dirs = ['../test'], build_dir='../test/build', duplicate=0)  env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)
835    env.SConscript(dirs = ['paso/profiling'], build_dir='build/$PLATFORM/paso/profiling', duplicate=0)
836    
837    
838    ############ Remember what optimizations we used ###############
839    
840    remember_list = []
841    
842    if env['usedebug']:
843      remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.debug"), None, Touch('$TARGET'))
844    
845    if env['usempi']:
846      remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.mpi"), None, Touch('$TARGET'))
847    
848    if env['useopenmp']:
849      remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.openmp"), None, Touch('$TARGET'))
850    
851    env.Alias('remember_options', remember_list)
852    
853    
854    ############### Record python interpreter version ##############
855    
856    if not IS_WINDOWS_PLATFORM:
857    
858      versionstring="Python "+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])
859      if sys.version_info[4] >0 : versionstring+="rc%s"%sys.version_info[4]
860      os.system("echo "+versionstring+" > "+os.path.join(env['libinstall'],"pyversion"))
861    
862    ############## Populate the buildvars file #####################
863    
864    buildvars=open(os.path.join(env['libinstall'],'buildvars'),'w')
865    buildvars.write('python='+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+'\n')
866    
867    # Find the boost version by extracting it from version.hpp
868    boosthpp=open(os.path.join(env['boost_path'],'boost','version.hpp'))
869    boostversion='unknown'
870    try:
871        for line in boosthpp:
872            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
873            if ver:
874                boostversion=ver.group(1)
875    except StopIteration:
876        pass
877    buildvars.write("boost="+boostversion+"\n")
878    buildvars.write("svn_revision="+str(global_revision)+"\n")
879    out="usedebug="
880    if env['usedebug']:
881        out+="y"
882    else:
883        out+="n"
884    out+="\nusempi="
885    if env['usempi']:
886        out+="y"
887    else:
888        out+="n"
889    out+="\nuseopenmp="
890    if env['useopenmp']:
891        out+="y"
892    else:
893        out+="n"
894    buildvars.write(out+"\n")
895    buildvars.write("mpi_flavour="+env['mpi_flavour']+'\n')
896    out="lapack="
897    if env['uselapack']:
898       out+="y"
899    else:
900       out+="n"
901    out+="\nsilo="
902    if env['usesilo']:
903       out+="y"
904    else:
905       out+="n"
906    buildvars.write(out+"\n")
907    buildvars.close()
908    
909    
910    ############ Targets to build and install libraries ############
911    
912    target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))
913    env.Alias('target_init', [target_init])
914    
915    # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>
916    env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])
917    env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])
918    
919    env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])
920    env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])
921    
922    env.Alias('build_weipa', ['target_install_weipa_headers', 'target_weipa_so', 'target_weipacpp_so'])
923    env.Alias('install_weipa', ['build_weipa', 'target_install_weipa_so', 'target_install_weipacpp_so', 'target_install_weipa_py'])
924    
925    env.Alias('build_escriptreader', ['target_install_weipa_headers', 'target_escriptreader_a'])
926    env.Alias('install_escriptreader', ['build_escriptreader', 'target_install_escriptreader_a'])
927    
928    env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])
929    env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])
930    
931    env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])
932    env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])
933    
934    # Now gather all the above into a couple easy targets: build_all and install_all
935    build_all_list = []
936    build_all_list += ['build_esysUtils']
937    build_all_list += ['build_paso']
938    build_all_list += ['build_weipa']
939    build_all_list += ['build_escript']
940    build_all_list += ['build_finley']
941    if env['usempi']:       build_all_list += ['target_pythonMPI_exe']
942    #if not IS_WINDOWS_PLATFORM:    build_all_list += ['target_escript_wrapper']
943    build_all_list += ['target_escriptconvert']
944    env.Alias('build_all', build_all_list)
945    
946    install_all_list = []
947    install_all_list += ['target_init']
948    install_all_list += ['install_esysUtils']
949    install_all_list += ['install_paso']
950    install_all_list += ['install_weipa']
951    install_all_list += ['install_escript']
952    install_all_list += ['install_finley']
953    install_all_list += ['target_install_pyvisi_py']
954    install_all_list += ['target_install_modellib_py']
955    install_all_list += ['target_install_pycad_py']
956    if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']
957    #if not IS_WINDOWS_PLATFORM:    install_all_list += ['target_install_escript_wrapper']
958    if env['usesilo']:  install_all_list += ['target_install_escriptconvert']
959    install_all_list += ['remember_options']
960    env.Alias('install_all', install_all_list)
961    
962    # Default target is install
963    env.Default('install_all')
964    
965    ############ Targets to build and run the test suite ###########
966    
967    env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])
968    env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])
969    env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])
970    env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])
971    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
972    
973    
974    ############ Targets to build the documentation ################
975    
976    env.Alias('api_epydoc','install_all')
977    
978    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html','install_pdf', 'cookbook_pdf'])
979    
980    build_platform=os.name
981    
982    if not IS_WINDOWS_PLATFORM:
983       try:
984        utest=open("utest.sh","w")
985        #Sometimes Mac python says it is posix
986        if (build_platform=='posix') and platform.system()=="Darwin":
987            build_platform='darwin'
988        utest.write(GroupTest.makeHeader(build_platform))
989        for tests in TestGroups:
990            utest.write(tests.makeString())
991        utest.close()
992        os.chmod("utest.sh",stat.S_IRWXU|stat.S_IRGRP|stat.S_IXGRP|stat.S_IROTH|stat.S_IXOTH)
993        print "utest.sh written"
994       except IOError:
995        print "Error attempting to write unittests file."
996        sys.exit(1)
997    
998       #Make sure that the escript wrapper is in place
999       if not os.path.isfile(os.path.join(env['bininstall'],'escript')):
1000           print "Copying escript wrapper"
1001           shutil.copy("bin/escript",os.path.join(env['bininstall'],'escript'))
1002    
1003    ############ Targets to build PasoTests suite ################
1004    
1005  syslib_install_target = env.installDirectory(sys_libinstall,libinstall)  env.Alias('build_PasoTests','build/'+build_platform+'/paso/profiling/PasoTests')
 syspy_install_target = env.installDirectory(sys_pyinstall,pyinstall,recursive=True)  
1006    
1007  install_target = env.Alias("install", env.Flatten([syslib_install_target, syspy_install_target]) )  env.Alias('release_prep', ['docs', 'install_all'])

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