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revision 2300 by gross, Wed Mar 11 08:17:57 2009 UTC revision 3967 by jfenwick, Mon Sep 17 04:02:58 2012 UTC
# Line 1  Line 1 
   
1  ########################################################  ########################################################
2  #  #
3  # Copyright (c) 2003-2008 by University of Queensland  # Copyright (c) 2003-2012 by University of Queensland
4  # Earth Systems Science Computational Center (ESSCC)  # Earth Systems Science Computational Center (ESSCC)
5  # http://www.uq.edu.au/esscc  # http://www.uq.edu.au/esscc
6  #  #
# Line 11  Line 10 
10  #  #
11  ########################################################  ########################################################
12    
13    EnsureSConsVersion(0,98,1)
14    EnsurePythonVersion(2,5)
15    
16  EnsureSConsVersion(0,96,91)  import sys, os, platform, re
17  EnsurePythonVersion(2,3)  from distutils import sysconfig
18    from site_init import *
19  import sys, os, re, socket, platform, stat  import subprocess
20    from subprocess import PIPE, Popen
21  # Add our extensions  
22  if os.path.isdir('scons'): sys.path.append('scons')  # Version number to check for in options file. Increment when new features are
23  import scons_extensions  # added or existing options changed.
24    REQUIRED_OPTS_VERSION=201
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
   
 # The string python2.4 or python2.5  
 python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  
25    
26  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
27  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS = (os.name == 'nt')
28    
29  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  ########################## Determine options file ############################
30    # 1. command line
31    # 2. scons/<hostname>_options.py
32    # 3. name as part of a cluster
33    options_file=ARGUMENTS.get('options_file', None)
34    if not options_file:
35        ext_dir = os.path.join(os.getcwd(), 'scons')
36        hostname = platform.node().split('.')[0]
37        for name in hostname, effectiveName(hostname):
38            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
39            options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
40            if os.path.isfile(options_file): break
41    
 # Read configuration options from file scons/<hostname>_options.py  
 hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
 tmp = os.path.join("scons",hostname+"_options.py")  
 options_file = ARGUMENTS.get('options_file', tmp)  
42  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
43    options_file = False      print("\nWARNING:\nOptions file %s" % options_file)
44    print "Options file not found (expected '%s')" % tmp      print("not found! Default options will be used which is most likely suboptimal.")
45  else:      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
46    print "Options file is", options_file      print("subdirectory and customize it to your needs.\n")
47        options_file = None
48  # Load options file and command-line arguments  
49  opts = Options(options_file, ARGUMENTS)  ############################### Build options ################################
50    
51  ############ Load build options ################################  default_prefix='/usr'
52    mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
53  opts.AddOptions(  lapack_flavours=('none', 'clapack', 'mkl')
54  # Where to install esys stuff  
55    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),  vars = Variables(options_file, ARGUMENTS)
56    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),  vars.AddVariables(
57    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
58    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
59    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
60  # Compilation options    BoolVariable('verbose', 'Output full compile/link lines', False),
61    BoolOption('dodebug', 'For backwards compatibility', 'no'),  # Compiler/Linker options
62    BoolOption('usedebug', 'Do you want a debug build?', 'no'),    ('cc', 'Path to C compiler', 'default'),
63    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
64    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
65    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
66    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
67    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),    ('cc_extra', 'Extra C compiler flags', ''),
68    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
   ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  
   ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  
   ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),  
   ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),  
   ('cc_extra', 'Extra C/C++ flags', ''),  
69    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
70    ('sys_libs', 'System libraries to link with', []),    BoolVariable('werror','Treat compiler warnings as errors', True),
71    ('ar_flags', 'Static library archiver flags to use', ''),    BoolVariable('debug', 'Compile with debug flags', False),
72    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'no'),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
73    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),    ('omp_flags', 'OpenMP compiler flags', 'default'),
74    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
75    ('forcelazy','for testing use only - set the default value for autolazy','leave_alone'),  # Mandatory libraries
76  # Python    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
77    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
78    ('python_lib_path', 'Path to Python libs', usr_lib),  # Mandatory for tests
79    ('python_libs', 'Python libraries to link with', [python_version]),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
80    ('python_cmd', 'Python command', 'python'),    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
81  # Boost  # Optional libraries and options
82    ('boost_path', 'Path to Boost includes', '/usr/include'),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
83    ('boost_lib_path', 'Path to Boost libs', usr_lib),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
84    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
85  # NetCDF    BoolVariable('netcdf', 'Enable netCDF file support', False),
86    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
87    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
88    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
89    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
90  # MPI    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
91    BoolOption('useMPI', 'For backwards compatibility', 'no'),    BoolVariable('papi', 'Enable PAPI', False),
92    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),  
   ('mpi_path', 'Path to MPI includes', '/usr/include'),  
   ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),  
   ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),  
 # ParMETIS  
   BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),  
   ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),  
   ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),  
   ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),  
 # PAPI  
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
93    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
94    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
95  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
96    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
97    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
98    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
99    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
100  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
101    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
102    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
103    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
104    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
105    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
106  # Silo    ('lapack_libs', 'LAPACK libraries to link with', []),
107    BoolOption('usesilo', 'switch on/off the usage of Silo', 'yes'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
108    ('silo_path', 'Path to Silo includes', '/usr/include'),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
   ('silo_lib_path', 'Path to Silo libs', usr_lib),  
109    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
110  # AMD (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
111    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
112    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
113    ('amd_libs', 'AMD libraries to link with', ['amd']),    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
114  # BLAS (used by UMFPACK)  # Advanced settings
115    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    #dudley_assemble_flags = -funroll-loops      to actually do something
116    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
117    ('blas_libs', 'BLAS libraries to link with', ['blas']),    # To enable passing function pointers through python
118  # An option for specifying the compiler tools set (see windows branch).    BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
119    ('tools_names', 'allow control over the tools in the env setup', ['intelc']),    # An option for specifying the compiler tools (see windows branch)
120  # finer control over library building, intel aggressive global optimisation    ('tools_names', 'Compiler tools to use', ['default']),
121  # works with dynamic libraries on windows.    ('env_export', 'Environment variables to be passed to tools',[]),
122    ('share_esysUtils', 'control static or dynamic esysUtils lib', False),    EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123    ('share_paso', 'control static or dynamic paso lib', False)    EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124      # finer control over library building, intel aggressive global optimisation
125      # works with dynamic libraries on windows.
126      ('build_shared', 'Build dynamic libraries only', False),
127      ('sys_libs', 'Extra libraries to link with', []),
128      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
129      ('SVN_VERSION', 'Do not use from options file', -2),
130      ('pythoncmd', 'which python to compile with','python'),
131      ('usepython3', 'Is this a python3 build? (experimental)', False),
132      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
133      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
134      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
135      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
136  )  )
137    
138  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
139    
140  # intelc uses regular expressions improperly and emits a warning about  # Intel's compiler uses regular expressions improperly and emits a warning
141  # failing to find the compilers.  This warning can be safely ignored.  # about failing to find the compilers. This warning can be safely ignored.
   
 if IS_WINDOWS_PLATFORM:  
       env = Environment(options = opts)  
       env = Environment(tools = ['default'] + env['tools_names'],  
                         options = opts)  
 else:  
    if socket.gethostname().split('.')[0] == 'service0':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 ############ Fill in compiler options if not set above #########  
   
 # Backwards compatibility: allow dodebug=yes and useMPI=yes  
 if env['dodebug']: env['usedebug'] = 1  
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
   fatalwarning      = ""        # Switch to turn warnings into errors  
   sysheaderopt      = ""  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-pedantic -Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"  
 #the long long warning occurs on the Mac  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-fopenmp"  
   omp_debug     = "-fopenmp"  
   omp_libs      = ['gomp']  
   pedantic      = "-pedantic-errors -Wno-long-long"  
   fatalwarning      = "-Werror"  
   sysheaderopt      = "-isystem "  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   fatalwarning      = ""  
   sysheaderopt      = ""  
 elif env["CC"] == "icl":  
   # intel C on Windows, see windows_intelc_options.py for a start  
   pedantic      = ""  
   fatalwarning      = ""  
   sysheaderopt      = ""  
   
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 #set up the autolazy values  
 if env['forcelazy']    != "leave_alone":  
   if env['forcelazy'] == 'on':  
     env.Append(CPPDEFINES='FAUTOLAZYON')  
   else:  
      if env['forcelazy'] == 'off':  
     env.Append(CPPDEFINES='FAUTOLAZYOFF')  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
   
 try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
 except KeyError: pass  
   
 try: env['ENV']['HOME'] = os.environ['HOME']  
 except KeyError: pass  
   
 # Configure for test suite  
 env.PrependENVPath('PYTHONPATH', prefix)  
 env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 env['ENV']['ESCRIPT_ROOT'] = prefix  
142    
143  ############ Set up paths for Configure() ######################  # PATH is needed so the compiler, linker and tools are found if they are not
144    # in default locations.
145  # Make a copy of an environment  env = Environment(tools = ['default'], options = vars,
146  # Use env.Clone if available, but fall back on env.Copy for older version of scons                    ENV = {'PATH': os.environ['PATH']})
147  def clone_env(env):                    
148    if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
149    else:                   return env.Copy() # scons-0.96  #set the vars for clang
150    def mkclang(env):
151      env['CC']='clang'
152      env['CXX']='clang++'
153                      
154                      
155    if env['tools_names'] != 'default':
156        zz=env['tools_names']
157        if 'clang' in zz:
158            zz.remove('clang')
159            zz.insert(0, mkclang)
160        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
161                          ENV = {'PATH' : os.environ['PATH']})
162    
163    if options_file:
164        opts_valid=False
165        if 'escript_opts_version' in env.Dictionary() and \
166            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
167                opts_valid=True
168        if opts_valid:
169            print("Using options in %s." % options_file)
170        else:
171            print("\nOptions file %s" % options_file)
172            print("is outdated! Please update the file by examining one of the TEMPLATE")
173            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
174            Exit(1)
175    
176    # Generate help text (scons -h)
177    Help(vars.GenerateHelpText(env))
178    
179    # Check for superfluous options
180    if len(vars.UnknownVariables())>0:
181        for k in vars.UnknownVariables():
182            print("Unknown option '%s'" % k)
183        Exit(1)
184    
185    #################### Make sure install directories exist #####################
186    
187    env['BUILD_DIR']=env['build_dir']
188    prefix=Dir(env['prefix']).abspath
189    env['incinstall'] = os.path.join(prefix, 'include')
190    env['bininstall'] = os.path.join(prefix, 'bin')
191    env['libinstall'] = os.path.join(prefix, 'lib')
192    env['pyinstall']  = os.path.join(prefix, 'esys')
193    if not os.path.isdir(env['bininstall']):
194        os.makedirs(env['bininstall'])
195    if not os.path.isdir(env['libinstall']):
196        os.makedirs(env['libinstall'])
197    if not os.path.isdir(env['pyinstall']):
198        os.makedirs(env['pyinstall'])
199    
200    env.Append(CPPPATH = [env['incinstall']])
201    env.Append(LIBPATH = [env['libinstall']])
202    
203    ################# Fill in compiler options if not set above ##################
204    
205    if env['cc'] != 'default': env['CC']=env['cc']
206    if env['cxx'] != 'default': env['CXX']=env['cxx']
207    
208    # version >=9 of intel C++ compiler requires use of icpc to link in C++
209    # runtimes (icc does not)
210    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
211        env['LINK'] = env['CXX']
212    
213    # default compiler/linker options
214    cc_flags = ''
215    cc_optim = ''
216    cc_debug = ''
217    omp_flags = ''
218    omp_ldflags = ''
219    fatalwarning = '' # switch to turn warnings into errors
220    sysheaderopt = '' # how to indicate that a header is a system header
221    
222    # env['CC'] might be a full path
223    cc_name=os.path.basename(env['CC'])
224    
225    if cc_name == 'icc':
226        # Intel compiler
227        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
228        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
229        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
230        omp_flags   = "-openmp -openmp_report0"
231        omp_ldflags = "-openmp -openmp_report0 -lpthread"
232        fatalwarning = "-Werror"
233    elif cc_name[:3] == 'gcc':
234        # GNU C on any system
235        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
236        cc_optim     = "-O3"
237        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
238        omp_flags    = "-fopenmp"
239        omp_ldflags  = "-fopenmp"
240        fatalwarning = "-Werror"
241        sysheaderopt = "-isystem"
242    elif cc_name == 'cl':
243        # Microsoft Visual C on Windows
244        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
245        cc_optim     = "/O2 /Op /W3"
246        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
247        fatalwarning = "/WX"
248    elif cc_name == 'icl':
249        # Intel C on Windows
250        cc_flags     = '/EHsc /GR /MD'
251        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
252        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
253        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
254        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
255    
256    # set defaults if not otherwise specified
257    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
258    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
259    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
260    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
261    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
262    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
263    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
264    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
265    
266    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
267    
268    if env['usepython3']:
269        env.Append(CPPDEFINES=['ESPYTHON3'])
270    
271    # set up the autolazy values
272    if env['forcelazy'] == 'on':
273        env.Append(CPPDEFINES=['FAUTOLAZYON'])
274    elif env['forcelazy'] == 'off':
275        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
276    
277    # set up the collective resolve values
278    if env['forcecollres'] == 'on':
279        env.Append(CPPDEFINES=['FRESCOLLECTON'])
280    elif env['forcecollres'] == 'off':
281        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
282    
283    # allow non-standard C if requested
284    if env['iknowwhatimdoing']:
285        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
286    
287    # Disable OpenMP if no flags provided
288    if env['openmp'] and env['omp_flags'] == '':
289       print("OpenMP requested but no flags provided - disabling OpenMP!")
290       env['openmp'] = False
291    
292    if env['openmp']:
293        env.Append(CCFLAGS = env['omp_flags'])
294        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
295    else:
296        env['omp_flags']=''
297        env['omp_ldflags']=''
298    
299    # add debug/non-debug compiler flags
300    if env['debug']:
301        env.Append(CCFLAGS = env['cc_debug'])
302    else:
303        env.Append(CCFLAGS = env['cc_optim'])
304    
305    # always add cc_flags
306    env.Append(CCFLAGS = env['cc_flags'])
307    
308    # add system libraries
309    env.AppendUnique(LIBS = env['sys_libs'])
310    
311    
312    global_revision=ARGUMENTS.get('SVN_VERSION', None)
313    if global_revision:
314        global_revision = re.sub(':.*', '', global_revision)
315        global_revision = re.sub('[^0-9]', '', global_revision)
316        if global_revision == '': global_revision='-2'
317    else:
318      # Get the global Subversion revision number for the getVersion() method
319      try:
320        global_revision = os.popen('svnversion -n .').read()
321        global_revision = re.sub(':.*', '', global_revision)
322        global_revision = re.sub('[^0-9]', '', global_revision)
323        if global_revision == '': global_revision='-2'
324      except:
325        global_revision = '-1'
326    env['svn_revision']=global_revision
327    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
328    
329    if IS_WINDOWS:
330        if not env['build_shared']:
331            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
332            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
333    
334    ###################### Copy required environment vars ########################
335    
336    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
337    if IS_WINDOWS:
338        LD_LIBRARY_PATH_KEY='PATH'
339        env['ENV']['LD_LIBRARY_PATH']=''
340    else:
341        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
342    
343    # the following env variables are exported for the unit tests
344    
345    for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
346        try:
347            env['ENV'][key] = os.environ[key]
348        except KeyError:
349            env['ENV'][key] = 1
350    
351    env_export=env['env_export']
352    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
353    
354    for key in set(env_export):
355        try:
356            env['ENV'][key] = os.environ[key]
357        except KeyError:
358            pass
359    
360  # Add cc option -I<Escript>/trunk/include  try:
361  env.Append(CPPPATH      = [Dir('include')])      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
362    except KeyError:
363        pass
364    
365    # these shouldn't be needed
366    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
367    #    try:
368    #        env['ENV'][key] = os.environ[key]
369    #    except KeyError:
370    #        pass
371    
372  # Add cc option -L<Escript>/trunk/lib  try:
373  env.Append(LIBPATH      = [Dir(env['libinstall'])])      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
374    except KeyError:
375        pass
376    
377  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  ######################## Add some custom builders ############################
 if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])  
378    
379  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  if env['pythoncmd']=='python':
380        py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
381    else:
382        py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
383    env.Append(BUILDERS = {'PyCompile' : py_builder});
384    
385  # MS Windows  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
386  if IS_WINDOWS_PLATFORM:  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if not env['share_esysUtils'] :  
     env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])  
   if not env['share_paso'] :  
     env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])  
387    
388    if env['usenetcdf']:  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
389      env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
390    
391  env.Append(ARFLAGS = env['ar_flags'])  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
392    env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
393    
394  # Get the global Subversion revision number for getVersion() method  ############################ Dependency checks ###############################
 try:  
    global_revision = os.popen("svnversion -n .").read()  
    global_revision = re.sub(":.*", "", global_revision)  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
395    
396  ############ numarray (required) ###############################  # Create a Configure() environment to check for compilers and python
397    conf = Configure(env.Clone())
398    
399  try:  ######## Test that the compilers work
400    from numarray import identity  
401  except ImportError:  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
402    print "Cannot import numarray, you need to set your PYTHONPATH"      if not conf.CheckCC():
403    sys.exit(1)          print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
404            Exit(1)
405  ############ C compiler (required) #############################      if not conf.CheckCXX():
406            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
407  # Create a Configure() environment for checking existence of required libraries and headers          Exit(1)
408  conf = Configure(clone_env(env))  else:
409        if not conf.CheckFunc('printf', language='c'):
410  # Test that the compiler is working          print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
411  if not conf.CheckFunc('printf'):          Exit(1)
412     print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])      if not conf.CheckFunc('printf', language='c++'):
413     sys.exit(1)          print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
414            Exit(1)
415    
416  if conf.CheckFunc('gethostname'):  if conf.CheckFunc('gethostname'):
417    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
   
 ############ python libraries (required) #######################  
418    
419    ######## Python headers & library (required)
420    
421  if not sysheaderopt =="":  #First we check to see if the config file has specified
422    conf.env.Append(CCFLAGS=sysheaderopt+env['python_path'])  ##Where to find the filae. Ideally, this should be automatic
423  else:  #But we need to deal with the case where python is not in its INSTALL
424    conf.env.AppendUnique(CPPPATH     = [env['python_path']])  #Directory
425    # Use the python scons is running
426  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  if env['pythoncmd']=='python':
427  conf.env.AppendUnique(LIBS      = [env['python_libs']])      python_inc_path=sysconfig.get_python_inc()
428        if IS_WINDOWS:
429  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs          python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
430  conf.env.PrependENVPath('PYTHONPATH', prefix)      elif env['PLATFORM']=='darwin':
431  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])          python_lib_path=sysconfig.get_config_var('LIBPL')
432        else:
433            python_lib_path=sysconfig.get_config_var('LIBDIR')
434    
435        #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
436        if IS_WINDOWS:
437            python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
438        else:
439            python_libs=['python'+sysconfig.get_python_version()]
440    
441    #if we want to use a python other than the one scons is running
442    else:
443        initstring='from __future__ import print_function;from distutils import sysconfig;'
444        if env['pythonlibname']!='':
445            python_libs=env['pythonlibname']
446        else:   # work it out by calling python    
447            if IS_WINDOWS:
448                cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
449            else:
450                cmd='print("python"+sysconfig.get_python_version())'
451            p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
452            python_libs=p.stdout.readline()
453            if env['usepython3']:       # This is to convert unicode str into py2 string
454                python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought
455            p.wait()
456            python_libs=python_libs.strip()
457    
458      
459        # Now we know whether we are using python3 or not
460        p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
461        python_inc_path=p.stdout.readline()
462        if env['usepython3']:
463             python_inc_path=python_inc_path.encode()
464        p.wait()  
465        python_inc_path=python_inc_path.strip()
466        if IS_WINDOWS:
467            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
468        elif env['PLATFORM']=='darwin':
469            cmd="sysconfig.get_config_var(\"LIBPL\")"
470        else:
471            cmd="sysconfig.get_config_var(\"LIBDIR\")"
472    
473        p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
474        python_lib_path=p.stdout.readline()
475        if env['usepython3']:
476            python_lib_path=python_lib_path.decode()
477        p.wait()
478        python_lib_path=python_lib_path.strip()
479    
480    #Check for an override from the config file.
481    #Ideally, this should be automatic
482    #But we need to deal with the case where python is not in its INSTALL
483    #Directory
484    if env['pythonlibpath']!='':
485        python_lib_path=env['pythonlibpath']
486    
487    if env['pythonincpath']!='':
488        python_inc_path=env['pythonincpath']
489    
490    
491    if sysheaderopt == '':
492        conf.env.AppendUnique(CPPPATH = [python_inc_path])
493    else:
494        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
495    
496    conf.env.AppendUnique(LIBPATH = [python_lib_path])
497    conf.env.AppendUnique(LIBS = python_libs)
498    # The wrapper script needs to find the libs
499    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
500    
501  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
502    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
503    sys.exit(1)      Exit(1)
504  if not conf.CheckFunc('Py_Exit'):  if not conf.CheckFunc('Py_Exit'):
505    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
506    sys.exit(1)      Exit(1)
507    
508  ############ boost (required) ##################################  ## reuse conf to check for numpy header (optional)
509    if env['usepython3']:
510  if not sysheaderopt =="":      # FIXME: This is until we can work out how to make the checks in python 3
511  # This is required because we can't -isystem /usr/system because it breaks std includes      conf.env['numpy_h']=False
512    if os.path.normpath(env['boost_path']) =="/usr/include":  else:
513      conf.env.Append(CCFLAGS=sysheaderopt+os.path.join(env['boost_path'],'boost'))      if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
514    else:          conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
515      conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path'])          conf.env['numpy_h']=True
516  else:      else:
517    conf.env.AppendUnique(CPPPATH     = [env['boost_path']])          conf.env['numpy_h']=False
   
 conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['boost_libs']])  
   
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  
 #ensure that our path entries remain at the front  
 conf.env.PrependENVPath('PYTHONPATH', prefix)  
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
   
 if not conf.CheckFunc('PyObject_SetAttr'):  
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
518    
519  # Commit changes to environment  # Commit changes to environment
520  env = conf.Finish()  env = conf.Finish()
521    
522  ############ VTK (optional) ####################################  ######## boost (required)
523    
524  if env['usevtk']:  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
525    try:  if sysheaderopt == '':
526      import vtk      env.AppendUnique(CPPPATH = [boost_inc_path])
527      env['usevtk'] = 1  else:
528    except ImportError:      # This is required because we can't -isystem /usr/include since it breaks
529      env['usevtk'] = 0      # std includes
530        if os.path.normpath(boost_inc_path) == '/usr/include':
531  # Add VTK to environment env if it was found          conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
532  if env['usevtk']:      else:
533    env.Append(CPPDEFINES = ['USE_VTK'])          env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
534    
535  ############ NetCDF (optional) #################################  env.AppendUnique(LIBPATH = [boost_lib_path])
536    env.AppendUnique(LIBS = env['boost_libs'])
537  conf = Configure(clone_env(env))  env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
538    
539  if env['usenetcdf']:  ######## numpy (required)
540    conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
541    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  if env['pythoncmd']=='python':
542    conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])      try:
543    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs        from numpy import identity
544    #ensure that our path entries remain at the front      except ImportError:
545    conf.env.PrependENVPath('PYTHONPATH', prefix)        print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
546    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])        Exit(1)
547    else:
548  if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0      p=subprocess.call([env['pythoncmd'],'-c','import numpy'])
549  if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0      if p!=0:
550          print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
551  # Add NetCDF to environment env if it was found        Exit(1)
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
 else:  
   conf.Finish()  
   
 ############ PAPI (optional) ###################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usepapi']:  
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs  
   #ensure that our path entries remain at the front  
   conf.env.PrependENVPath('PYTHONPATH', prefix)  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
   
 # Add PAPI to environment env if it was found  
 if env['usepapi']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['BLOCKPAPI'])  
 else:  
   conf.Finish()  
   
 ############ MKL (optional) ####################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usemkl']:  
   conf.env.AppendUnique(CPPPATH = [env['mkl_path']])  
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs  
   #ensure that our path entries remain at the front  
   conf.env.PrependENVPath('PYTHONPATH', prefix)  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
   
 # Add MKL to environment env if it was found  
 if env['usemkl']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['MKL'])  
 else:  
   conf.Finish()  
   
 ############ UMFPACK (optional) ################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['useumfpack']:  
   conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs  
   #ensure that our path entries remain at the front  
   conf.env.PrependENVPath('PYTHONPATH', prefix)  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 # if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?  
   
 # Add UMFPACK to environment env if it was found  
 if env['useumfpack']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
 else:  
   conf.Finish()  
   
 ############ Silo (optional) ###################################  
   
 if env['usesilo']:  
   conf = Configure(clone_env(env))  
   conf.env.AppendUnique(CPPPATH = [env['silo_path']])  
   conf.env.AppendUnique(LIBPATH = [env['silo_lib_path']])  
   conf.env.AppendUnique(LIBS = [env['silo_libs']])  
   if not conf.CheckCHeader('silo.h'): env['usesilo'] = 0  
   if not conf.CheckFunc('DBMkDir'): env['usesilo'] = 0  
   conf.Finish()  
   
 # Add the path to Silo to environment env if it was found.  
 # Note that we do not add the libs since they are only needed for the  
 # escriptreader library and tools.  
 if env['usesilo']:  
   env.AppendUnique(CPPPATH = [env['silo_path']])  
   env.AppendUnique(LIBPATH = [env['silo_lib_path']])  
   env.Append(CPPDEFINES = ['HAVE_SILO'])  
   
 ############ Add the compiler flags ############################  
   
 # Enable debug by choosing either cc_debug or cc_optim  
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
 else:  
   env.Append(CCFLAGS        = env['cc_optim'])  
   env.Append(CCFLAGS        = env['omp_optim'])  
   
 # Always use cc_flags  
 env.Append(CCFLAGS      = env['cc_flags'])  
 env.Append(LIBS         = [env['omp_libs']])  
552    
553    ######## CppUnit (required for tests)
554    
555  ############ Add some custom builders ##########################  try:
556        cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
557  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)      env.AppendUnique(CPPPATH = [cppunit_inc_path])
558  env.Append(BUILDERS = {'PyCompile' : py_builder});      env.AppendUnique(LIBPATH = [cppunit_lib_path])
559        env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
560        env['cppunit']=True
561    except:
562        env['cppunit']=False
563    
564  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  ######## netCDF (optional)
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
565    
566  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  netcdf_inc_path=''
567  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  netcdf_lib_path=''
568    if env['netcdf']:
569        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
570        env.AppendUnique(CPPPATH = [netcdf_inc_path])
571        env.AppendUnique(LIBPATH = [netcdf_lib_path])
572        env.AppendUnique(LIBS = env['netcdf_libs'])
573        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
574        env.Append(CPPDEFINES = ['USE_NETCDF'])
575    
576    ######## PAPI (optional)
577    
578    papi_inc_path=''
579    papi_lib_path=''
580    if env['papi']:
581        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
582        env.AppendUnique(CPPPATH = [papi_inc_path])
583        env.AppendUnique(LIBPATH = [papi_lib_path])
584        env.AppendUnique(LIBS = env['papi_libs'])
585        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
586        env.Append(CPPDEFINES = ['BLOCKPAPI'])
587    
588    ######## MKL (optional)
589    
590    mkl_inc_path=''
591    mkl_lib_path=''
592    if env['mkl']:
593        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
594        env.AppendUnique(CPPPATH = [mkl_inc_path])
595        env.AppendUnique(LIBPATH = [mkl_lib_path])
596        env.AppendUnique(LIBS = env['mkl_libs'])
597        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
598        env.Append(CPPDEFINES = ['MKL'])
599    
600    ######## UMFPACK (optional)
601    
602    umfpack_inc_path=''
603    umfpack_lib_path=''
604    if env['umfpack']:
605        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
606        env.AppendUnique(CPPPATH = [umfpack_inc_path])
607        env.AppendUnique(LIBPATH = [umfpack_lib_path])
608        env.AppendUnique(LIBS = env['umfpack_libs'])
609        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
610        env.Append(CPPDEFINES = ['UMFPACK'])
611    
612    ######## LAPACK (optional)
613    
614    if env['lapack']=='mkl' and not env['mkl']:
615        print("mkl_lapack requires MKL!")
616        Exit(1)
617    
618    env['uselapack'] = env['lapack']!='none'
619    lapack_inc_path=''
620    lapack_lib_path=''
621    if env['uselapack']:
622        header='clapack.h'
623        if env['lapack']=='mkl':
624            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
625            header='mkl_lapack.h'
626        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
627        env.AppendUnique(CPPPATH = [lapack_inc_path])
628        env.AppendUnique(LIBPATH = [lapack_lib_path])
629        env.AppendUnique(LIBS = env['lapack_libs'])
630        env.Append(CPPDEFINES = ['USE_LAPACK'])
631    
632    ######## Silo (optional)
633    
634    silo_inc_path=''
635    silo_lib_path=''
636    if env['silo']:
637        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
638        env.AppendUnique(CPPPATH = [silo_inc_path])
639        env.AppendUnique(LIBPATH = [silo_lib_path])
640        # Note that we do not add the libs since they are only needed for the
641        # weipa library and tools.
642        #env.AppendUnique(LIBS = [env['silo_libs']])
643    
644    ######## VSL random numbers (optional)
645    if env['vsl_random']:
646        env.Append(CPPDEFINES = ['MKLRANDOM'])
647    
648    ######## VisIt (optional)
649    
650    visit_inc_path=''
651    visit_lib_path=''
652    if env['visit']:
653        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
654        env.AppendUnique(CPPPATH = [visit_inc_path])
655        env.AppendUnique(LIBPATH = [visit_lib_path])
656    
657    ######## MPI (optional)
658    
659    if env['mpi']=='no':
660        env['mpi']='none'
661    
662    env['usempi'] = env['mpi']!='none'
663    mpi_inc_path=''
664    mpi_lib_path=''
665    if env['usempi']:
666        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
667        env.AppendUnique(CPPPATH = [mpi_inc_path])
668        env.AppendUnique(LIBPATH = [mpi_lib_path])
669        env.AppendUnique(LIBS = env['mpi_libs'])
670        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
671        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
672        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
673        # On the other hand MPT and OpenMPI don't define the latter so we have to
674        # do that here
675        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
676            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
677    
678    ######## BOOMERAMG (optional)
679    
680    if env['mpi'] == 'none': env['boomeramg'] = False
681    
682    boomeramg_inc_path=''
683    boomeramg_lib_path=''
684    if env['boomeramg']:
685        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
686        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
687        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
688        env.AppendUnique(LIBS = env['boomeramg_libs'])
689        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
690        env.Append(CPPDEFINES = ['BOOMERAMG'])
691    
692    ######## ParMETIS (optional)
693    
694    if not env['usempi']: env['parmetis'] = False
695    
696    parmetis_inc_path=''
697    parmetis_lib_path=''
698    if env['parmetis']:
699        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
700        env.AppendUnique(CPPPATH = [parmetis_inc_path])
701        env.AppendUnique(LIBPATH = [parmetis_lib_path])
702        env.AppendUnique(LIBS = env['parmetis_libs'])
703        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
704        env.Append(CPPDEFINES = ['USE_PARMETIS'])
705    
706  ############ MPI (optional) ####################################  ######## gmsh (optional, for tests)
707    
708  # Create a modified environment for MPI programs (identical to env if usempi=no)  try:
709  env_mpi = clone_env(env)      import subprocess
710        p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
711        _,e=p.communicate()
712        if e.split().count("MPI"):
713            env['gmsh']='m'
714        else:
715            env['gmsh']='s'
716    except OSError:
717        env['gmsh']=False
718    
719    ######## PDFLaTeX (for documentation)
720    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
721        env['pdflatex']=True
722    else:
723        env['pdflatex']=False
724    
725  # Start a new configure environment that reflects what we've already found  ######################## Summarize our environment ###########################
 conf = Configure(clone_env(env_mpi))  
726    
727  if env_mpi['usempi']:  # keep some of our install paths first in the list for the unit tests
728    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
729    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  env.PrependENVPath('PYTHONPATH', prefix)
730    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  env['ENV']['ESCRIPT_ROOT'] = prefix
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs  
   #ensure that our path entries remain at the front  
   conf.env.PrependENVPath('PYTHONPATH', prefix)  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
   
 # Add MPI to environment env_mpi if it was found  
 if env_mpi['usempi']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])  
 else:  
   conf.Finish()  
   
 env['usempi'] = env_mpi['usempi']  
   
 ############ ParMETIS (optional) ###############################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  
   
 if env_mpi['useparmetis']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs  
   #ensure that our path entries remain at the front  
   conf.env.PrependENVPath('PYTHONPATH', prefix)  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
   
 # Add ParMETIS to environment env_mpi if it was found  
 if env_mpi['useparmetis']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])  
 else:  
   conf.Finish()  
   
 env['useparmetis'] = env_mpi['useparmetis']  
   
 ############ Now we switch on Warnings as errors ###############  
   
 #this needs to be done after configuration because the scons test files have warnings in them  
   
 if ((fatalwarning != "") and (env['usewarnings'])):  
   env.Append(CCFLAGS        = fatalwarning)  
   env_mpi.Append(CCFLAGS        = fatalwarning)  
   
 ############ Summarize our environment #########################  
   
 print ""  
 print "Summary of configuration (see ./config.log for information)"  
 print " Using python libraries"  
 print " Using numarray"  
 print " Using boost"  
 if env['usenetcdf']: print "    Using NetCDF"  
 else: print "   Not using NetCDF"  
 if env['usevtk']: print "   Using VTK"  
 else: print "   Not using VTK"  
 if env['usemkl']: print "   Using MKL"  
 else: print "   Not using MKL"  
 if env['useumfpack']: print "   Using UMFPACK"  
 else: print "   Not using UMFPACK"  
 if env['usesilo']: print "  Using Silo"  
 else: print "   Not using Silo"  
 if env['useopenmp']: print "    Using OpenMP"  
 else: print "   Not using OpenMP"  
 if env['usempi']: print "   Using MPI"  
 else: print "   Not using MPI"  
 if env['useparmetis']: print "  Using ParMETIS"  
 else: print "   Not using ParMETIS (requires MPI)"  
 if env['usepapi']: print "  Using PAPI"  
 else: print "   Not using PAPI"  
 if env['usedebug']: print " Compiling for debug"  
 else: print "   Not compiling for debug"  
 print " Installing in", prefix  
 if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"  
 else: print "   Not treating warnings as errors"  
 print ""  
   
 ############ Delete option-dependent files #####################  
   
 Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  
 Execute(Delete(env['libinstall'] + "pyversion"))  
 if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  
731    
732    if not env['verbose']:
733        env['CCCOMSTR'] = "Compiling $TARGET"
734        env['CXXCOMSTR'] = "Compiling $TARGET"
735        env['SHCCCOMSTR'] = "Compiling $TARGET"
736        env['SHCXXCOMSTR'] = "Compiling $TARGET"
737        env['ARCOMSTR'] = "Linking $TARGET"
738        env['LINKCOMSTR'] = "Linking $TARGET"
739        env['SHLINKCOMSTR'] = "Linking $TARGET"
740        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
741        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
742        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
743        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
744        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
745    
746    print("")
747    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
748    print("Escript/Finley revision %s"%global_revision)
749    print("  Install prefix:  %s"%env['prefix'])
750    print("          Python:  %s"%sysconfig.PREFIX)
751    print("           boost:  %s"%env['boost_prefix'])
752    print("           numpy:  YES")
753    if env['usempi']:
754        print("             MPI:  YES (flavour: %s)"%env['mpi'])
755    else:
756        print("             MPI:  DISABLED")
757    if env['uselapack']:
758        print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
759    else:
760        print("          LAPACK:  DISABLED")
761    d_list=[]
762    e_list=[]
763    for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':
764        if env[i]: e_list.append(i)
765        else: d_list.append(i)
766    for i in e_list:
767        print("%16s:  YES"%i)
768    for i in d_list:
769        print("%16s:  DISABLED"%i)
770    if env['cppunit']:
771        print("         CppUnit:  FOUND")
772    else:
773        print("         CppUnit:  NOT FOUND")
774    if env['gmsh']=='m':
775        print("            gmsh:  FOUND, MPI-ENABLED")
776    elif env['gmsh']=='s':
777        print("            gmsh:  FOUND")
778    else:
779        print("            gmsh:  NOT FOUND")
780    if env['numpy_h']:
781        print("   numpy headers:  FOUND")
782    else:
783        print("   numpy headers:  NOT FOUND")
784    print("   vsl_random:  %s"%env['vsl_random'])
785        
786    if ((fatalwarning != '') and (env['werror'])):
787        print("  Treating warnings as errors")
788    else:
789        print("  NOT treating warnings as errors")
790    print("")
791    
792  ############ Build the subdirectories ##########################  ####################### Configure the subdirectories #########################
793    
794  from grouptest import *  from grouptest import *
795    
796  TestGroups=[]  TestGroups=[]
797    
798  Export(  # keep an environment without warnings-as-errors
799    ["env",  dodgy_env=env.Clone()
    "env_mpi",  
    "clone_env",  
    "IS_WINDOWS_PLATFORM",  
    "TestGroups"  
    ]  
   )  
   
 env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  
 env.SConscript(dirs = ['tools/libescriptreader/src'], build_dir='build/$PLATFORM/tools/libescriptreader', duplicate=0)  
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  
 env.SConscript(dirs = ['paso/profiling'], build_dir='build/$PLATFORM/paso/profiling', duplicate=0)  
   
   
 ############ Remember what optimizations we used ###############  
800    
801  remember_list = []  # now add warnings-as-errors flags. This needs to be done after configuration
802    # because the scons test files have warnings in them
803    if ((fatalwarning != '') and (env['werror'])):
804        env.Append(CCFLAGS = fatalwarning)
805    
806  if env['usedebug']:  Export(
807    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))    ['env',
808       'dodgy_env',
809       'IS_WINDOWS',
810       'TestGroups'
811      ]
812    )
813    
814  if env['usempi']:  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
815    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
816    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
817    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
818    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
819    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
820    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
821    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
822    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
823    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
824    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
825    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
826    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
827    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
828    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
829    
830    
831    ######################## Populate the buildvars file #########################
832    
833    # remove obsolete file
834    if not env['usempi']:
835        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
836        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
837    
838    # Try to extract the boost version from version.hpp
839    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
840    boostversion='unknown'
841    try:
842        for line in boosthpp:
843            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
844            if ver:
845                boostversion=ver.group(1)
846    except StopIteration:
847        pass
848    boosthpp.close()
849    
850    
851    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
852    buildvars.write("svn_revision="+str(global_revision)+"\n")
853    buildvars.write("prefix="+prefix+"\n")
854    buildvars.write("cc="+env['CC']+"\n")
855    buildvars.write("cxx="+env['CXX']+"\n")
856    if env['pythoncmd']=='python':
857        buildvars.write("python="+sys.executable+"\n")
858        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
859    else:
860        buildvars.write("python="+env['pythoncmd']+"\n")
861        p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)
862        verstring=p.stdout.readline().strip()
863        p.wait()
864        buildvars.write("python_version="+verstring+"\n")
865    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
866    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
867    buildvars.write("boost_version="+boostversion+"\n")
868    buildvars.write("debug=%d\n"%int(env['debug']))
869    buildvars.write("openmp=%d\n"%int(env['openmp']))
870    buildvars.write("mpi=%s\n"%env['mpi'])
871    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
872    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
873    buildvars.write("lapack=%s\n"%env['lapack'])
874    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
875    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
876        buildvars.write("%s=%d\n"%(i, int(env[i])))
877        if env[i]:
878            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
879            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
880    buildvars.close()
881    
882  if env['omp_optim'] != '':  ################### Targets to build and install libraries ###################
   remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  
883    
884  env.Alias('remember_options', remember_list)  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
885    env.Alias('target_init', [target_init])
886    # delete buildvars upon cleanup
887    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
888    
889    # The headers have to be installed prior to build in order to satisfy
890    # #include <paso/Common.h>
891    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
892    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
893    
894  ############### Record python interpreter version ##############  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
895    env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
896    
897  if not IS_WINDOWS_PLATFORM:  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
898    versionstring="Python "+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
   os.system("echo "+versionstring+" > "+env['libinstall']+"/pyversion")  
899    
900  ############ Targets to build and install libraries ############  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
901    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
902    
903  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
904  env.Alias('target_init', [target_init])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
905    
906  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
907  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
908    
909  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
910  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
911    
912  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
913  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
914    
915  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
916  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
917    
918  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
919  build_all_list = []  build_all_list = []
920  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
921  build_all_list += ['build_paso']  build_all_list += ['build_paso']
922  build_all_list += ['build_escript']  build_all_list += ['build_escript']
923    build_all_list += ['build_pasowrap']
924    build_all_list += ['build_dudley']
925  build_all_list += ['build_finley']  build_all_list += ['build_finley']
926  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
927  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_escript_wrapper']  build_all_list += ['build_weipa']
928  if env['usesilo']:  build_all_list += ['target_escript2silo']  if not IS_WINDOWS: build_all_list += ['build_escriptreader']
929    if env['usempi']:   build_all_list += ['build_pythonMPI']
930    build_all_list += ['build_escriptconvert']
931  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
932    
933  install_all_list = []  install_all_list = []
# Line 746  install_all_list += ['target_init'] Line 935  install_all_list += ['target_init']
935  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
936  install_all_list += ['install_paso']  install_all_list += ['install_paso']
937  install_all_list += ['install_escript']  install_all_list += ['install_escript']
938    install_all_list += ['install_pasowrap']
939    install_all_list += ['install_dudley']
940  install_all_list += ['install_finley']  install_all_list += ['install_finley']
941  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
942  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
943  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
944  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_downunder_py']
945  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_escript_wrapper']  install_all_list += ['install_modellib_py']
946  if env['usesilo']:  install_all_list += ['target_install_escript2silo']  install_all_list += ['install_pycad_py']
947  install_all_list += ['remember_options']  if env['usempi']:   install_all_list += ['install_pythonMPI']
948    install_all_list += ['install_escriptconvert']
949  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
950    
951  # Default target is install  # Default target is install
952  env.Default('install_all')  env.Default('install_all')
953    
954  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
955    
956  env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  if not env['cppunit']:
957  env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])      test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
958  env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])      env.Alias('run_tests', test_msg)
959  env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  env.Alias('run_tests', ['install_all'])
960    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
961  env.Alias('build_full',['install_all','build_tests','build_py_tests'])  env.Alias('build_full',['install_all','build_tests','build_py_tests'])
962    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
963    
964  ############ Targets to build the documentation ################  ##################### Targets to build the documentation #####################
   
 env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  
965    
966  if not IS_WINDOWS_PLATFORM:  env.Alias('api_epydoc','install_all')
967     try:  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
968      utest=open("utest.sh","w")  env.Alias('release_prep', ['docs', 'install_all'])
969      build_platform=os.name      #Sometimes Mac python says it is posix  
970      if (build_platform=='posix') and platform.system()=="Darwin":  if not IS_WINDOWS:
971          build_platform='darwin'      try:
972      utest.write(GroupTest.makeHeader(build_platform))          utest=open('utest.sh','w')
973      for tests in TestGroups:          utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix))
974          utest.write(tests.makeString())          for tests in TestGroups:
975      utest.close()              utest.write(tests.makeString())
976      os.chmod("utest.sh",stat.S_IRWXU|stat.S_IRGRP|stat.S_IXGRP|stat.S_IROTH|stat.S_IXOTH)          utest.close()
977      print "utest.sh written"          Execute(Chmod('utest.sh', 0o755))
978     except IOError:          print("Generated utest.sh.")
979      print "Error attempting to write unittests file."      except IOError:
980      sys.exit(1)          print("Error attempting to write unittests file.")
981            Exit(1)
982    
983        # delete utest.sh upon cleanup
984        env.Clean('target_init', 'utest.sh')
985    
986        # Make sure that the escript wrapper is in place
987        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
988            print("Copying escript wrapper.")
989            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
990    

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