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revision 1390 by gross, Mon Jan 14 03:46:11 2008 UTC revision 4640 by jfenwick, Fri Jan 31 00:56:51 2014 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ##############################################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2013 by University of Queensland
4  #       Primary Business: Queensland, Australia  # http://www.uq.edu.au
 #  Licensed under the Open Software License version 3.0  
 #     http://www.opensource.org/licenses/osl-3.0.php  
   
 # top-level Scons configuration file for all esys13 modules  
 # Begin initialisation Section  
 # all of this section just intialises default environments and helper  
 # scripts. You shouldn't need to modify this section.  
 EnsureSConsVersion(0,96,91)  
 EnsurePythonVersion(2,3)  
   
   
 #===============================================================  
 #   import tools:  
 import glob  
 import sys, os, re  
 # Add our extensions  
 if sys.path.count('scons')==0: sys.path.append('scons')  
 import scons_extensions  
   
 # We may also need to know where python's site-packages subdirectory lives  
 python_version = 'python%s.%s'%(sys.version_info[0],sys.version_info[1])  
   
 #===============================================================  
   
 tools_prefix="/usr"  
   
 #==============================================================================================      
 #      
 #    get the installation prefix  
5  #  #
6  prefix = ARGUMENTS.get('prefix', sys.prefix )  # Primary Business: Queensland, Australia
7    # Licensed under the Open Software License version 3.0
8  # We may also need to know where python's site-packages subdirectory lives  # http://www.opensource.org/licenses/osl-3.0.php
9  python_version = 'python%s.%s'%(sys.version_info[0],sys.version_info[1])  #
10  # Install as a standard python package in /usr/lib64 if available, else in /usr/lib  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)
11  if os.path.isdir(  prefix+"/lib64/"+python_version+"/site-packages"):  # Development since 2012 by School of Earth Sciences
12     sys_dir_packages =  prefix+"/lib64/"+python_version+"/site-packages/esys"  #
13     sys_dir_libraries = prefix+"/lib64"  ##############################################################################
14  else:  
15     sys_dir_packages =  prefix+"/lib/"+python_version+"/site-packages/esys"  EnsureSConsVersion(0,98,1)
16     sys_dir_libraries = prefix+"/lib"  EnsurePythonVersion(2,5)
17    
18  sys_dir_examples = prefix+"/share/doc/esys"  import atexit, sys, os, platform, re
19    from distutils import sysconfig
20  source_root = Dir('#.').abspath  from dependencies import *
21    from site_init import *
22  dir_packages = os.path.join(source_root,"esys")  
23  dir_examples = os.path.join(source_root,"examples")  # Version number to check for in options file. Increment when new features are
24  dir_libraries = os.path.join(source_root,"lib")  # added or existing options changed.
25    REQUIRED_OPTS_VERSION=201
26  print "Source root is : ",source_root  
27  print " Default packages local installation:    ", dir_packages  # MS Windows support, many thanks to PH
28  print " Default library local installation  ", dir_libraries  IS_WINDOWS = (os.name == 'nt')
29  print " Default example local  installation:    ", dir_examples  
30  print "Install prefix is: ", prefix  IS_OSX = (os.uname()[0] == 'Darwin')
31  print " Default packages system installation:   ", sys_dir_packages  
32  print " Default library system installation     ", sys_dir_libraries  ########################## Determine options file ############################
33  print " Default example system installation:    ", sys_dir_examples  # 1. command line
34    # 2. scons/<hostname>_options.py
35  #==============================================================================================      # 3. name as part of a cluster
36    options_file=ARGUMENTS.get('options_file', None)
37  # Default options and options help text  if not options_file:
38  # These are defaults and can be overridden using command line arguments or an options file.      ext_dir = os.path.join(os.getcwd(), 'scons')
39  # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used      hostname = platform.node().split('.')[0]
40  # DO NOT CHANGE THEM HERE      for name in hostname, effectiveName(hostname):
41  # Where to install?          mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
42  #==============================================================================================              options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
43  #              if os.path.isfile(options_file): break
44  #    get the options file if present:  
45  #  if not os.path.isfile(options_file):
46  options_file = ARGUMENTS.get('options_file','')      print("\nWARNING:\nOptions file %s" % options_file)
47        print("not found! Default options will be used which is most likely suboptimal.")
48  if not os.path.isfile(options_file) :      print("We recommend that you copy one of the TEMPLATE files in the scons/")
49      options_file = False      print("subdirectory and customize it to your needs.\n")
50        options_file = None
51  if not options_file :  
52     import socket  ############################### Build options ################################
53     hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
54     tmp = os.path.join("scons",hostname+"_options.py")  default_prefix='/usr'
55    mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
56     if os.path.isfile(tmp) :  lapack_flavours=('none', 'clapack', 'mkl')
57        options_file = tmp  
58    vars = Variables(options_file, ARGUMENTS)
59  IS_WINDOWS_PLATFORM = (os.name== "nt")  vars.AddVariables(
60      PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
61  # If you're not going to tell me then......    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
62  # FIXME: add one for the altix too.    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
63  if not options_file :    BoolVariable('verbose', 'Output full compile/link lines', False),
64     if IS_WINDOWS_PLATFORM :  # Compiler/Linker options
65        options_file = "scons/windows_mscv71_options.py"    ('cxx', 'Path to C++ compiler', 'default'),
66     else:    ('cc_flags', 'Base C++ compiler flags', 'default'),
67        options_file = "scons/linux_gcc_eg_options.py"    ('cc_optim', 'Additional C++ flags for a non-debug build', 'default'),
68      ('cc_debug', 'Additional C++ flags for a debug build', 'default'),
69  # and load it    ('cxx_extra', 'Extra C++ compiler flags', ''),
70  opts = Options(options_file, ARGUMENTS)    ('ld_extra', 'Extra linker flags', ''),
71  #================================================================    BoolVariable('werror','Treat compiler warnings as errors', True),
72  #    BoolVariable('debug', 'Compile with debug flags', False),
73  #   check if UMFPACK is installed on the system:    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
74  #    ('omp_flags', 'OpenMP compiler flags', 'default'),
75  uf_root=None    ('omp_ldflags', 'OpenMP linker flags', 'default'),
76  for i in [ 'UMFPACK', 'umfpack', 'ufsparse', 'UFSPARSE']:  # Mandatory libraries
77     if os.path.isdir(os.path.join(tools_prefix,'include',i)):    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
78         uf_root=i    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
79         print i," is used form ",tools_prefix  # Mandatory for tests
80         break    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
81  if not uf_root==None:    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
82     umf_path_default=os.path.join(tools_prefix,'include',uf_root)  # Optional libraries and options
83     umf_lib_path_default=os.path.join(tools_prefix,'lib')    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
84     umf_libs_default=['umfpack']    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
85     amd_path_default=os.path.join(tools_prefix,'include',uf_root)    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
86     amd_lib_path_default=os.path.join(tools_prefix,'lib')    BoolVariable('netcdf', 'Enable netCDF file support', False),
87     amd_libs_default=['amd']    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
88     ufc_path_default=os.path.join(tools_prefix,'include',uf_root)    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
89  else:    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
90     umf_path_default=None    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
91     umf_lib_path_default=None    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
92     umf_libs_default=None    BoolVariable('papi', 'Enable PAPI', False),
93     amd_path_default=None    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
94     amd_lib_path_default=None    ('papi_libs', 'PAPI libraries to link with', ['papi']),
95     amd_libs_default=None    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
96     ufc_path_default=None    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
97  #    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
98  #==========================================================================    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
99  #    BoolVariable('umfpack', 'Enable UMFPACK', False),
100  #    python installation:    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
101  #    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
102  python_path_default=os.path.join(tools_prefix,'include','python%s.%s'%(sys.version_info[0],sys.version_info[1]))    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
103  python_lib_path_default=os.path.join(tools_prefix,'lib')    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
104  python_lib_default="python%s.%s"%(sys.version_info[0],sys.version_info[1])    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
105      EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
106  #==========================================================================    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
107  #    ('lapack_libs', 'LAPACK libraries to link with', []),
108  #    boost installation:    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
109  #    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
110  boost_path_default=os.path.join(tools_prefix,'include')    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
111  boost_lib_path_default=os.path.join(tools_prefix,'lib')    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
112  boost_lib_default=['boost_python']    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
113      ('visit_libs', 'VisIt libraries to link with', ['simV2']),
114  #==========================================================================    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
115  #  # Advanced settings
116  #    check if netCDF is installed on the system:    #dudley_assemble_flags = -funroll-loops      to actually do something
117  #    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
118  netCDF_path_default=os.path.join(tools_prefix,'include','netcdf-3')    # To enable passing function pointers through python
119  netCDF_lib_path_default=os.path.join(tools_prefix,'lib')    BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
120      # An option for specifying the compiler tools (see windows branch)
121  if os.path.isdir(netCDF_path_default) and os.path.isdir(netCDF_lib_path_default):    ('tools_names', 'Compiler tools to use', ['default']),
122       useNetCDF_default='yes'    ('env_export', 'Environment variables to be passed to tools',[]),
123       netCDF_libs_default=[ 'netcdf_c++', 'netcdf' ]    EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124  else:    EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
125       useNetCDF_default='no'    # finer control over library building, intel aggressive global optimisation
126       netCDF_path_default=None    # works with dynamic libraries on windows.
127       netCDF_lib_path_default=None    ('build_shared', 'Build dynamic libraries only', False),
128       netCDF_libs_default=None    ('sys_libs', 'Extra libraries to link with', []),
129      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
130  #==========================================================================    ('SVN_VERSION', 'Do not use from options file', -2),
131  #    ('pythoncmd', 'which python to compile with','python'),
132  #  MPI:    ('usepython3', 'Is this a python3 build? (experimental)', False),
133  #    ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
134  if IS_WINDOWS_PLATFORM:    ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
135     useMPI_default='no'    ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
136     mpi_path_default=None    BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
    mpi_lib_path_default=None  
    mpi_libs_default=[]  
    mpi_run_default=None  
 else:  
    useMPI_default='no'  
    mpi_root='/usr/local'  
    mpi_path_default=os.path.join(mpi_root,'include')  
    mpi_lib_path_default=os.path.join(mpi_root,'lib')  
    mpi_libs_default=[ 'mpich' , 'pthread', 'rt' ]  
    mpi_run_default='mpiexec -np 1'  
 #  
 #==========================================================================  
 #  
 #    compile:  
 #  
 cc_flags_default='-O3 -std=c99 -ffast-math -fpic -Wno-unknown-pragmas -ansi'  
 cc_flags_debug_default='-g -O0 -ffast-math -std=c99 -fpic -Wno-unknown-pragmas -ansi'  
 cxx_flags_default='--no-warn -ansi'  
 cxx_flags_debug_default='--no-warn -ansi -DDOASSERT'  
   
 #==============================================================================================      
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 opts.AddOptions(  
 # Where to install esys stuff  
   ('incinstall', 'where the esys headers will be installed',             Dir('#.').abspath+'/include'),  
   ('libinstall', 'where the esys libraries will be installed',           dir_libraries),  
   ('pyinstall', 'where the esys python modules will be installed',       dir_packages),  
   ('exinstall', 'where the esys examples will be installed',             dir_examples),  
   ('sys_libinstall', 'where the system esys libraries will be installed',       sys_dir_libraries),  
   ('sys_pyinstall', 'where the system esys python modules will be installed',   sys_dir_packages),  
   ('sys_exinstall', 'where the system esys examples will be installed',         sys_dir_examples),  
   ('src_zipfile', 'the source zip file will be installed.',              Dir('#.').abspath+"/release/escript_src.zip"),  
   ('test_zipfile', 'the test zip file will be installed.',               Dir('#.').abspath+"/release/escript_tests.zip"),  
   ('src_tarfile', 'the source tar file will be installed.',              Dir('#.').abspath+"/release/escript_src.tar.gz"),  
   ('test_tarfile', 'the test tar file will be installed.',               Dir('#.').abspath+"/release/escript_tests.tar.gz"),  
   ('examples_tarfile', 'the examples tar file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.tar.gz"),  
   ('examples_zipfile', 'the examples zip file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.zip"),  
   ('guide_pdf', 'name of the user guide in pdf format',                  Dir('#.').abspath+"/release/doc/user/guide.pdf"),  
   ('api_epydoc', 'name of the epydoc api docs directory',                Dir('#.').abspath+"/release/doc/epydoc"),  
   ('guide_html', 'name of the directory for user guide in html format',  Dir('#.').abspath+"/release/doc/user/html"),  
   ('api_doxygen', 'name of the doxygen api docs directory',prefix+"/release/doc/doxygen"),  
 # Compilation options  
   BoolOption('dodebug', 'Do you want a debug build?', 'no'),  
   BoolOption('bounds_check', 'Do you want extra array bounds checking?', 'no'),  
   ('options_file', "Optional file containing preferred options. Ignored if it doesn't exist (default: scons/<hostname>_options.py)", options_file),  
   ('cc_defines','C/C++ defines to use', None),  
   ('cc_flags','C compiler flags to use (Release build)', cc_flags_default),  
   ('cc_flags_debug', 'C compiler flags to use (Debug build)', cc_flags_debug_default),  
   ('cxx_flags', 'C++ compiler flags to use (Release build)', cxx_flags_default),  
   ('cxx_flags_debug', 'C++ compiler flags to use (Debug build)', cxx_flags_debug_default),  
   ('omp_flags', 'OpenMP compiler flags to use (Release build)', ''),  
   ('omp_flags_debug', 'OpenMP compiler flags to use (Debug build)', ''),  
   ('ar_flags', 'Static library archiver flags to use', None),  
   ('sys_libs', 'System libraries to link with', None),  
   ('tar_flags','flags for zip files','-c -z'),  
 # MKL  
   PathOption('mkl_path', 'Path to MKL includes', None),  
   PathOption('mkl_lib_path', 'Path to MKL libs', None),  
   ('mkl_libs', 'MKL libraries to link with', None),  
 # SCSL  
   PathOption('scsl_path', 'Path to SCSL includes', None),  
   PathOption('scsl_lib_path', 'Path to SCSL libs', None),  
   ('scsl_libs', 'SCSL libraries to link with', None),  
   ('scsl_libs_MPI', 'SCSL libraries to link with for MPI build', None),  
 # UMFPACK  
   PathOption('ufc_path', 'Path to UFconfig includes', ufc_path_default),  
   PathOption('umf_path', 'Path to UMFPACK includes', umf_path_default),  
   PathOption('umf_lib_path', 'Path to UMFPACK libs', umf_lib_path_default),  
   ('umf_libs', 'UMFPACK libraries to link with', umf_libs_default),  
 # AMD (used by UMFPACK)  
   PathOption('amd_path', 'Path to AMD includes', amd_path_default),  
   PathOption('amd_lib_path', 'Path to AMD libs', amd_lib_path_default),  
   ('amd_libs', 'AMD libraries to link with', amd_libs_default),  
 # TRILINOS  
   PathOption('trilinos_path', 'Path to TRILINOS includes', None),  
   PathOption('trilinos_lib_path', 'Path to TRILINOS libs', None),  
   ('trilinos_libs', 'TRILINOS libraries to link with', None),  
 # BLAS  
   PathOption('blas_path', 'Path to BLAS includes', None),  
   PathOption('blas_lib_path', 'Path to BLAS libs', None),  
   ('blas_libs', 'BLAS libraries to link with', None),  
 # netCDF  
   ('useNetCDF', 'switch on/off the usage of netCDF', useNetCDF_default),  
   PathOption('netCDF_path', 'Path to netCDF includes', netCDF_path_default),  
   PathOption('netCDF_lib_path', 'Path to netCDF libs', netCDF_lib_path_default),  
   ('netCDF_libs', 'netCDF C++ libraries to link with', netCDF_libs_default),  
 # Python  
 # locations of include files for python  
 # FIXME: python_path should be python_inc_path and the same for boost etc.  
   PathOption('python_path', 'Path to Python includes', python_path_default),  
   PathOption('python_lib_path', 'Path to Python libs', python_lib_path_default),  
   ('python_lib', 'Python libraries to link with', python_lib_default),  
   ('python_cmd', 'Python command', 'python'),  
 # Boost  
   PathOption('boost_path', 'Path to Boost includes', boost_path_default),  
   PathOption('boost_lib_path', 'Path to Boost libs', boost_lib_path_default),  
   ('boost_lib', 'Boost libraries to link with', boost_lib_default),  
 # Doc building  
 #  PathOption('doxygen_path', 'Path to Doxygen executable', None),  
 #  PathOption('epydoc_path', 'Path to Epydoc executable', None),  
 # PAPI  
   PathOption('papi_path', 'Path to PAPI includes', None),  
   PathOption('papi_lib_path', 'Path to PAPI libs', None),  
   ('papi_libs', 'PAPI libraries to link with', None),  
   ('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', None),  
 # MPI  
   BoolOption('useMPI', 'Compile parallel version using MPI', useMPI_default),  
   ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),  
   PathOption('mpi_path', 'Path to MPI includes', mpi_path_default),  
   ('mpi_run', 'mpirun name' , mpi_run_default),  
   PathOption('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)',mpi_lib_path_default),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', mpi_libs_default)  
137  )  )
 #=================================================================================================  
 #  
 #   Note: On the Altix the intel compilers are not automatically  
 #   detected by scons intelc.py script. The Altix has a different directory  
 #   path and in some locations the "modules" facility is used to support  
 #   multiple compiler versions. This forces the need to import the users PATH  
 #   environment which isn't the "scons way"  
 #   This doesn't impact linux and windows which will use the default compiler (g++ or msvc, or the intel compiler if it is installed on both platforms)  
 #   FIXME: Perhaps a modification to intelc.py will allow better support for ia64 on altix  
 #  
   
 if IS_WINDOWS_PLATFORM:  
       env = Environment(tools = ['default', 'msvc'], options = opts)  
 else:  
    if os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not). FIXME: this behaviour could be directly incorporated into scons intelc.py  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 if env['bounds_check']:  
    env.Append(CPPDEFINES = [ 'BOUNDS_CHECK' ])  
    env.Append(CXXDEFINES = [ 'BOUNDS_CHECK' ])  
    bounds_check = env['bounds_check']  
 else:  
    bounds_check = 0  
   
 #=================================================================================================  
 #  
 #     Initialise Scons Build Environment  
 #     check for user environment variables we are interested in  
 try:  
    tmp = os.environ['PYTHONPATH']  
    env['ENV']['PYTHONPATH'] = tmp  
 except KeyError:  
    pass  
   
 env.PrependENVPath('PYTHONPATH', source_root)  
   
 try:  
    omp_num_threads = os.environ['OMP_NUM_THREADS']  
 except KeyError:  
    omp_num_threads = 1  
 env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  
   
 try:  
    path = os.environ['PATH']  
    env['ENV']['PATH'] = path  
 except KeyError:  
    omp_num_threads = 1  
138    
139  env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  ##################### Create environment and help text #######################
140    
141    # Intel's compiler uses regular expressions improperly and emits a warning
142    # about failing to find the compilers. This warning can be safely ignored.
143    
144  # Copy some variables from the system environment to the build environment  # PATH is needed so the compiler, linker and tools are found if they are not
145  try:  # in default locations.
146     env['ENV']['DISPLAY'] = os.environ['DISPLAY']  env = Environment(tools = ['default'], options = vars,
147     env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']                    ENV = {'PATH': os.environ['PATH']})
148     home_temp = os.environ['HOME']   # MPICH2's mpd needs $HOME to find $HOME/.mpd.conf  
149     env['ENV']['HOME'] = home_temp  # set the vars for clang
150  except KeyError:  def mkclang(env):
151     pass      env['CXX']='clang++'
152    
153  try:  if env['tools_names'] != 'default':
154     tmp = os.environ['PATH']      zz=env['tools_names']
155     env['ENV']['PATH'] = tmp      if 'clang' in zz:
156  except KeyError:          zz.remove('clang')
157     pass          zz.insert(0, mkclang)
158        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
159  try:                        ENV = {'PATH' : os.environ['PATH']})
160     tmp = os.environ['LD_LIBRARY_PATH']  
161     print tmp  if options_file:
162     env['ENV']['LD_LIBRARY_PATH'] = tmp      opts_valid=False
163  except KeyError:      if 'escript_opts_version' in env.Dictionary() and \
164     pass          int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
165  #==========================================================================              opts_valid=True
166  #      if opts_valid:
167  #    Add some customer builders          print("Using options in %s." % options_file)
168  #      else:
169  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)          print("\nOptions file %s" % options_file)
170  env.Append(BUILDERS = {'PyCompile' : py_builder});          print("is outdated! Please update the file by examining one of the TEMPLATE")
171            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
172  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed',          Exit(1)
173                                src_suffix=env['PROGSUFFIX'], single_source=True)  
174    # Generate help text (scons -h)
175  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  Help(vars.GenerateHelpText(env))
176    
177  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  # Check for superfluous options
178  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  if len(vars.UnknownVariables())>0:
179        for k in vars.UnknownVariables():
180  # Convert the options which are held in environment variable into python variables for ease of handling and configure compilation options          print("Unknown option '%s'" % k)
181  try:      Exit(1)
182     incinstall = env['incinstall']  
183     env.Append(CPPPATH = [incinstall,])  # create dictionary which will be populated with info for buildvars file
184  except KeyError:  env['buildvars']={}
185     incinstall = None  # create list which will be populated with warnings if there are any
186  try:  env['warnings']=[]
187     libinstall = env['libinstall']  
188     env.Append(LIBPATH = [libinstall,]) # Adds -L for building of libescript.so libfinley.so escriptcpp.so finleycpp.so  #################### Make sure install directories exist #####################
189     env.PrependENVPath('LD_LIBRARY_PATH', libinstall)  
190     if IS_WINDOWS_PLATFORM :  env['BUILD_DIR']=Dir(env['build_dir']).abspath
191        env.PrependENVPath('PATH', libinstall)  prefix=Dir(env['prefix']).abspath
192        env.PrependENVPath('PATH', env['boost_lib_path'])  env['buildvars']['prefix']=prefix
193  except KeyError:  env['incinstall'] = os.path.join(prefix, 'include')
194     libinstall = None  env['bininstall'] = os.path.join(prefix, 'bin')
195  try:  env['libinstall'] = os.path.join(prefix, 'lib')
196     pyinstall = env['pyinstall'] # all targets will install into pyinstall/esys but PYTHONPATH points at straight pyinstall so you go import esys.escript etc  env['pyinstall']  = os.path.join(prefix, 'esys')
197  except KeyError:  if not os.path.isdir(env['bininstall']):
198     pyinstall = None      os.makedirs(env['bininstall'])
199    if not os.path.isdir(env['libinstall']):
200  try:      os.makedirs(env['libinstall'])
201     cc_defines = env['cc_defines']  if not os.path.isdir(env['pyinstall']):
202     env.Append(CPPDEFINES = cc_defines)      os.makedirs(env['pyinstall'])
203  except KeyError:  
204     pass  env.Append(CPPPATH = [env['incinstall']])
205  try:  env.Append(LIBPATH = [env['libinstall']])
206     flags = env['ar_flags']  
207     env.Append(ARFLAGS = flags)  ################# Fill in compiler options if not set above ##################
208  except KeyError:  
209     ar_flags = None  if env['cxx'] != 'default': env['CXX']=env['cxx']
210  try:  
211     sys_libs = env['sys_libs']  # version >=9 of intel C++ compiler requires use of icpc to link in C++
212  except KeyError:  # runtimes (icc does not)
213     sys_libs = []  if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
214        env['LINK'] = env['CXX']
215  try:  
216     tar_flags = env['tar_flags']  # default compiler/linker options
217     env.Replace(TARFLAGS = tar_flags)  cc_flags = ''
218  except KeyError:  cc_optim = ''
219     pass  cc_debug = ''
220    omp_flags = ''
221  try:  omp_ldflags = ''
222     exinstall = env['exinstall']  fatalwarning = '' # switch to turn warnings into errors
223  except KeyError:  sysheaderopt = '' # how to indicate that a header is a system header
224     exinstall = None  
225  try:  # env['CC'] might be a full path
226     sys_libinstall = env['sys_libinstall']  cc_name=os.path.basename(env['CXX'])
227  except KeyError:  
228     sys_libinstall = None  if cc_name == 'icpc':
229  try:      # Intel compiler
230     sys_pyinstall = env['sys_pyinstall']      # #1875: offsetof applied to non-POD types is nonstandard (in boost)
231  except KeyError:      # removed -std=c99 because icpc doesn't like it and we aren't using c anymore
232     sys_pyinstall = None      cc_flags    = "-fPIC -w2 -wd1875 -Wno-unknown-pragmas -DBLOCKTIMER -DCORE_ID1"
233  try:      cc_optim    = "-O3 -ftz -fno-alias -ipo -xHost"
234     sys_exinstall = env['sys_exinstall']      cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
235  except KeyError:      omp_flags   = "-openmp"
236     sys_exinstall = None      omp_ldflags = "-openmp -openmp_report=1"
237        fatalwarning = "-Werror"
238  # ====================== debugging ===================================  elif cc_name[:3] == 'g++':
239  try:      # GNU C on any system
240     dodebug = env['dodebug']      # note that -ffast-math is not used because it breaks isnan(),
241  except KeyError:      # see mantis #691
242     dodebug = None      cc_flags     = "-pedantic -Wall -fPIC -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
243        cc_optim     = "-O3"
244        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
245        omp_flags    = "-fopenmp"
246        omp_ldflags  = "-fopenmp"
247        fatalwarning = "-Werror"
248        sysheaderopt = "-isystem"
249    elif cc_name == 'cl':
250        # Microsoft Visual C on Windows
251        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
252        cc_optim     = "/O2 /Op /W3"
253        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
254        fatalwarning = "/WX"
255    elif cc_name == 'icl':
256        # Intel C on Windows
257        cc_flags     = '/EHsc /GR /MD'
258        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
259        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
260        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
261        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
262    
263    env['sysheaderopt']=sysheaderopt
264    
265    # set defaults if not otherwise specified
266    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
267    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
268    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
269    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
270    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
271    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
272    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
273    
274    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
275    
276    if env['usepython3']:
277        env.Append(CPPDEFINES=['ESPYTHON3'])
278    
279    # set up the autolazy values
280    if env['forcelazy'] == 'on':
281        env.Append(CPPDEFINES=['FAUTOLAZYON'])
282    elif env['forcelazy'] == 'off':
283        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
284    
285    # set up the collective resolve values
286    if env['forcecollres'] == 'on':
287        env.Append(CPPDEFINES=['FRESCOLLECTON'])
288    elif env['forcecollres'] == 'off':
289        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
290    
291    # allow non-standard C if requested
292    if env['iknowwhatimdoing']:
293        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
294    
295    # Disable OpenMP if no flags provided
296    if env['openmp'] and env['omp_flags'] == '':
297       env['warnings'].append("OpenMP requested but no flags provided - disabling OpenMP!")
298       env['openmp'] = False
299    
300    if env['openmp']:
301        env.Append(CCFLAGS = env['omp_flags'])
302        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
303    else:
304        env['omp_flags']=''
305        env['omp_ldflags']=''
306    
307    env['buildvars']['openmp']=int(env['openmp'])
308    
309    # add debug/non-debug compiler flags
310    env['buildvars']['debug']=int(env['debug'])
311    if env['debug']:
312        env.Append(CCFLAGS = env['cc_debug'])
313    else:
314        env.Append(CCFLAGS = env['cc_optim'])
315    
316    # always add cc_flags
317    env.Append(CCFLAGS = env['cc_flags'])
318    
319    # add system libraries
320    env.AppendUnique(LIBS = env['sys_libs'])
321    
322    # determine svn revision
323    global_revision=ARGUMENTS.get('SVN_VERSION', None)
324    if global_revision:
325        global_revision = re.sub(':.*', '', global_revision)
326        global_revision = re.sub('[^0-9]', '', global_revision)
327        if global_revision == '': global_revision='-2'
328    else:
329      # Get the global Subversion revision number for the getVersion() method
330      try:
331        global_revision = os.popen('svnversion -n .').read()
332        global_revision = re.sub(':.*', '', global_revision)
333        global_revision = re.sub('[^0-9]', '', global_revision)
334        if global_revision == '': global_revision='-2'
335      except:
336        global_revision = '-1'
337    env['svn_revision']=global_revision
338    env['buildvars']['svn_revision']=global_revision
339    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
340    
341    if IS_WINDOWS:
342        if not env['build_shared']:
343            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
344            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
345    
346    # VSL random numbers
347    env['buildvars']['vsl_random']=int(env['vsl_random'])
348    if env['vsl_random']:
349        env.Append(CPPDEFINES = ['MKLRANDOM'])
350    
351    env['IS_WINDOWS']=IS_WINDOWS
352    
353    ###################### Copy required environment vars ########################
354    
355    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
356    if IS_WINDOWS:
357        LD_LIBRARY_PATH_KEY='PATH'
358        env['ENV']['LD_LIBRARY_PATH']=''
359    else:
360        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
361    
362  # === switch on omp ===================================================  env['LD_LIBRARY_PATH_KEY']=LD_LIBRARY_PATH_KEY
 try:  
   omp_flags = env['omp_flags']  
 except KeyError:  
   omp_flags = ''  
363    
364  try:  # the following env variables are exported for the unit tests
   omp_flags_debug = env['omp_flags_debug']  
 except KeyError:  
   omp_flags_debug = ''  
365    
366  # ========= use mpi? =====================================================  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
367  try:      try:
368     useMPI = env['useMPI']          env['ENV'][key] = os.environ[key]
369  except KeyError:      except KeyError:
370     useMPI = None          env['ENV'][key] = 1
 # ========= set compiler flags ===========================================  
371    
372  # Can't use MPI and OpenMP simultaneously at this time  env_export=env['env_export']
373  if useMPI:  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP'])
     omp_flags=''  
     omp_flags_debug=''  
374    
375  if dodebug:  for key in set(env_export):
376      try:      try:
377        flags = env['cc_flags_debug'] + ' ' + omp_flags_debug          env['ENV'][key] = os.environ[key]
       env.Append(CCFLAGS = flags)  
378      except KeyError:      except KeyError:
       pass  
 else:  
    try:  
       flags = env['cc_flags'] + ' ' + omp_flags  
       env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
 if dodebug:  
      try:  
         flags = env['cxx_flags_debug']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 else:  
      try:  
         flags = env['cxx_flags']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
379          pass          pass
 try:  
      if env['CC'] == 'gcc': env.Append(CCFLAGS = "-pedantic-errors -Wno-long-long")  
 except:  
      pass  
   
 # ============= Remember what options were used in the compile =====================================  
 if not IS_WINDOWS_PLATFORM:  
   env.Execute("/bin/rm -f " + libinstall + "/Compiled.with.*")  
   if dodebug:       env.Execute("touch " + libinstall + "/Compiled.with.debug")  
   if useMPI:        env.Execute("touch " + libinstall + "/Compiled.with.mpi")  
   if omp_flags != '':   env.Execute("touch " + libinstall + "/Compiled.with.OpenMP")  
   if bounds_check:  env.Execute("touch " + libinstall + "/Compiled.with.bounds_check")  
   
 # ============= set mkl (but only of no MPI) =====================================  
 if not useMPI:  
    try:  
       includes = env['mkl_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['mkl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
   
    try:  
       mkl_libs = env['mkl_libs']  
    except KeyError:  
       mkl_libs = []  
 else:  
      mkl_libs = []  
   
 # ============= set scsl (but only of no MPI) =====================================  
 if not useMPI:  
    try:  
       includes = env['scsl_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['scsl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
     
    try:  
       scsl_libs = env['scsl_libs']  
    except KeyError:  
       scsl_libs = [ ]  
380    
 else:  
     scsl_libs =  []  
   
 # ============= set TRILINOS (but only with MPI) =====================================  
 if useMPI:  
    try:  
       includes = env['trilinos_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['trilinos_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       trilinos_libs = env['trilinos_libs']  
    except KeyError:  
       trilinos_libs = []  
 else:  
      trilinos_libs = []  
   
   
 # ============= set umfpack (but only without MPI) =====================================  
 umf_libs=[ ]  
 if not useMPI:  
    try:  
       includes = env['umf_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['umf_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       umf_libs = env['umf_libs']  
       umf_libs+=umf_libs  
    except KeyError:  
       pass  
   
    try:  
       includes = env['ufc_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       includes = env['amd_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['amd_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       amd_libs = env['amd_libs']  
       umf_libs+=amd_libs  
    except KeyError:  
       pass  
   
 # ============= set TRILINOS (but only with MPI) =====================================  
 if useMPI:  
    try:  
       includes = env['trilinos_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['trilinos_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       trilinos_libs = env['trilinos_libs']  
    except KeyError:  
       trilinos_libs = []  
 else:  
      trilinos_libs = []  
   
 # ============= set blas =====================================  
381  try:  try:
382     includes = env['blas_path']      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
    env.Append(CPPPATH = [includes,])  
383  except KeyError:  except KeyError:
384     pass      pass
385    
386  try:  if IS_OSX:
387     lib_path = env['blas_lib_path']    try:
388     env.Append(LIBPATH = [lib_path,])      env.PrependENVPath('DYLD_LIBRARY_PATH', os.environ['DYLD_LIBRARY_PATH'])
389  except KeyError:    except KeyError:
390     pass      pass
391    
 try:  
    blas_libs = env['blas_libs']  
 except KeyError:  
    blas_libs = [ ]  
392    
393  # ========== netcdf ====================================  # these shouldn't be needed
394  try:  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
395     useNetCDF = env['useNetCDF']  #    try:
396  except KeyError:  #        env['ENV'][key] = os.environ[key]
397     useNetCDF = 'yes'  #    except KeyError:
398     pass  #        pass
       
 if useNetCDF == 'yes':  
    try:  
       netCDF_libs = env['netCDF_libs']  
    except KeyError:  
       pass  
   
    env.Append(LIBS = netCDF_libs)  
    env.Append(CPPDEFINES = [ 'USE_NETCDF' ])  
    try:  
       includes = env['netCDF_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['netCDF_lib_path']  
       env.Append(LIBPATH = [ lib_path, ])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
       if IS_WINDOWS_PLATFORM :  
          env.PrependENVPath('PATH', lib_path)  
    except KeyError:  
       pass  
 else:  
    print "Warning: Installation is not configured with netCDF. Some I/O function may not be available."  
    netCDF_libs=[ ]  
399    
 # ====================== boost ======================================  
 try:  
    includes = env['boost_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['boost_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
    env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    if IS_WINDOWS_PLATFORM :  
       env.PrependENVPath('PATH', lib_path)  
 except KeyError:  
    pass  
 try:  
    boost_lib = env['boost_lib']  
 except KeyError:  
    boost_lib = None  
 # ====================== python ======================================  
 try:  
    includes = env['python_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['python_lib_path']  
    env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    python_lib = env['python_lib']  
 except KeyError:  
    python_lib = None  
 # =============== documentation =======================================  
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 # =============== PAPI =======================================  
400  try:  try:
401     includes = env['papi_path']      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
    env.Append(CPPPATH = [includes,])  
402  except KeyError:  except KeyError:
403     pass      pass
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 # ============= set mpi =====================================  
 if useMPI:  
    env.Append(CPPDEFINES=['PASO_MPI',])  
    try:  
       includes = env['mpi_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
    try:  
       lib_path = env['mpi_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
    try:  
       mpi_libs = env['mpi_libs']  
    except KeyError:  
       mpi_libs = []  
   
    try:  
       mpi_run = env['mpi_run']  
    except KeyError:  
       mpi_run = ''  
   
    try:  
        mpich_ignore_cxx_seek=env['MPICH_IGNORE_CXX_SEEK']  
        env.Append(CPPDEFINES = [ mpich_ignore_cxx_seek ] )  
    except KeyError:  
       pass  
 else:  
   mpi_libs=[]  
   mpi_run = mpi_run_default  
 # =========== zip files ===========================================  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 try:  
    papi_instrument_solver = env['papi_instrument_solver']  
 except KeyError:  
    papi_instrument_solver = None  
404    
405    ######################## Add some custom builders ############################
406    
407  # ============= and some helpers =====================================  if env['pythoncmd']=='python':
408  try:      py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
409     doxygen_path = env['doxygen_path']  else:
410  except KeyError:      py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
411     doxygen_path = None  env.Append(BUILDERS = {'PyCompile' : py_builder});
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 try:  
    src_zipfile = env.File(env['src_zipfile'])  
 except KeyError:  
    src_zipfile = None  
 try:  
    test_zipfile = env.File(env['test_zipfile'])  
 except KeyError:  
    test_zipfile = None  
 try:  
    examples_zipfile = env.File(env['examples_zipfile'])  
 except KeyError:  
    examples_zipfile = None  
412    
413  try:  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
414     src_tarfile = env.File(env['src_tarfile'])  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
 except KeyError:  
    src_tarfile = None  
 try:  
    test_tarfile = env.File(env['test_tarfile'])  
 except KeyError:  
    test_tarfile = None  
 try:  
    examples_tarfile = env.File(env['examples_tarfile'])  
 except KeyError:  
    examples_tarfile = None  
415    
416  try:  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
417     guide_pdf = env.File(env['guide_pdf'])  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
 except KeyError:  
    guide_pdf = None  
418    
419  try:  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
420     guide_html_index = env.File('index.htm',env['guide_html'])  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
 except KeyError:  
    guide_html_index = None  
421    
422  try:  ############################ Dependency checks ###############################
    api_epydoc = env.Dir(env['api_epydoc'])  
 except KeyError:  
    api_epydoc = None  
423    
424  try:  ######## Compiler
425     api_doxygen = env.Dir(env['api_doxygen'])  env=checkCompiler(env)
 except KeyError:  
    api_doxygen = None  
426    
427  global_revision="$Rev$"  ######## Python headers & library (required)
428  try:  env=checkPython(env)
429     svn_pipe = os.popen("svnversion -n .")  
430     global_revision = svn_pipe.readlines()  ######## boost & boost-python (required)
431     svn_pipe.close()  env=checkBoost(env)
432  except:  
433     print "Extracting revision number failed. Using %s instead."%global_revision  ######## numpy (required) and numpy headers (optional)
434  global_revision = re.sub(":.*", "", global_revision[0])  env=checkNumpy(env)
435  global_revision = re.sub("[^0-9]", "", global_revision)  
436  env.Append(CPPDEFINES = "SVN_VERSION="+global_revision)  ######## CppUnit (required for tests)
437    env=checkCppUnit(env)
438  # Python install - esys __init__.py  
439  init_target = env.Command(pyinstall+'/__init__.py', None, Touch('$TARGET'))  ######## optional python modules (sympy, pyproj)
440    env=checkOptionalModules(env)
441  # FIXME: exinstall and friends related to examples are not working.  
442  build_target = env.Alias('build',[libinstall,incinstall,pyinstall,init_target])  ######## optional dependencies (netCDF, PAPI, MKL, UMFPACK, Lapack, Silo, ...)
443    env=checkOptionalLibraries(env)
444  env.Default(build_target)  
445    ######## PDFLaTeX (for documentation)
446  # Zipgets  env=checkPDFLatex(env)
447  env.Alias('release_src',[ src_zipfile, src_tarfile ])  
448  env.Alias('release_tests',[ test_zipfile, test_tarfile])  # keep some of our install paths first in the list for the unit tests
449  env.Alias('release_examples',[ examples_zipfile, examples_tarfile])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
450  env.Alias('examples_zipfile',examples_zipfile)  env.PrependENVPath('PYTHONPATH', prefix)
451  env.Alias('examples_tarfile',examples_tarfile)  env['ENV']['ESCRIPT_ROOT'] = prefix
452  env.Alias('api_epydoc',api_epydoc)  
453  env.Alias('api_doxygen',api_doxygen)  if not env['verbose']:
454  env.Alias('guide_html_index',guide_html_index)      env['CXXCOMSTR'] = "Compiling $TARGET"
455  env.Alias('guide_pdf', guide_pdf)      env['SHCXXCOMSTR'] = "Compiling $TARGET"
456  env.Alias('docs',[ 'release_examples', 'guide_pdf', api_epydoc, api_doxygen, guide_html_index])      env['ARCOMSTR'] = "Linking $TARGET"
457  env.Alias('release', ['release_src', 'release_tests', 'docs'])      env['LINKCOMSTR'] = "Linking $TARGET"
458        env['SHLINKCOMSTR'] = "Linking $TARGET"
459  env.Alias('build_tests',build_target)    # target to build all C++ tests      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
460  env.Alias('build_py_tests',build_target) # target to build all python tests      env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
461  env.Alias('build_all_tests', [ 'build_tests', 'build_py_tests' ] ) # target to build all python tests      env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
462  env.Alias('run_tests', 'build_tests')   # target to run all C++ test      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
463  env.Alias('py_tests', 'build_py_tests') # taget to run all released python tests      #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
464  env.Alias('all_tests', ['run_tests', 'py_tests']) # target to run all C++ and released python tests  
465    ####################### Configure the subdirectories #########################
466    
467  # Allow sconscripts to see the env  # remove obsolete files
468  Export(["IS_WINDOWS_PLATFORM", "env", "incinstall", "libinstall", "pyinstall", "dodebug", "mkl_libs", "scsl_libs", "umf_libs", "blas_libs", "netCDF_libs", "useNetCDF", "mpi_run",  if not env['usempi']:
469      "boost_lib", "python_lib", "doxygen_path", "epydoc_path", "papi_libs",      Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
470          "sys_libs", "test_zipfile", "src_zipfile", "test_tarfile", "src_tarfile", "examples_tarfile", "examples_zipfile", "trilinos_libs", "mpi_libs", "papi_instrument_solver",      Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
471          "guide_pdf", "guide_html_index", "api_epydoc", "api_doxygen", "useMPI" ])  
472    from grouptest import *
473  # End initialisation section  TestGroups=[]
474  # Begin configuration section  
475  # adds this file and the scons option directore to the source tar  # keep an environment without warnings-as-errors
476  release_srcfiles=[env.File('SConstruct'),env.Dir('lib'),env.Dir('include'),]+[ env.File(x) for x in glob.glob('scons/*.py') ]  dodgy_env=env.Clone()
477  release_testfiles=[env.File('README_TESTS'),]  
478  env.Zip(src_zipfile, release_srcfiles)  # now add warnings-as-errors flags. This needs to be done after configuration
479  env.Zip(test_zipfile, release_testfiles)  # because the scons test files have warnings in them
480  try:  if ((fatalwarning != '') and (env['werror'])):
481     env.Tar(src_tarfile, release_srcfiles)      env.Append(CCFLAGS = fatalwarning)
482     env.Tar(test_tarfile, release_testfiles)  
483  except AttributeError:  Export(
484     pass    ['env',
485  # Insert new components to be build here     'dodgy_env',
486  # FIXME: might be nice to replace this verbosity with a list of targets and some     'IS_WINDOWS',
487  # FIXME: nifty python to create the lengthy but very similar env.Sconscript lines     'TestGroups'
488  # Third Party libraries    ]
489  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  )
 # C/C++ Libraries  
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 # bruce is removed for now as it doesn't really do anything  
 # env.SConscript(dirs = ['bruce/src'], build_dir='build/$PLATFORM/bruce', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 #env.SConscript(dirs = ['../test'], build_dir='../test/build', duplicate=0)  
490    
491    env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
492    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
493    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
494    env.SConscript(dirs = ['escript/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
495    
496    #This will pull in the escriptcore/py_src and escriptcore/test
497    env.SConscript(dirs = ['escriptcore/src'], variant_dir='$BUILD_DIR/$PLATFORM/escriptcore', duplicate=0)
498    #env.SConscript(dirs = ['escript/test'], variant_dir='$BUILD_DIR/$PLATFORM/escript/test', duplicate=0)
499    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
500    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
501    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
502    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
503    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
504    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
505    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
506    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
507    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
508    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
509    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
510    
511    
512    ######################## Populate the buildvars file #########################
513    
514    write_buildvars(env)
515    
516    ################### Targets to build and install libraries ###################
517    
518    target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
519    env.Alias('target_init', [target_init])
520    # delete buildvars upon cleanup
521    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
522    
523    # The headers have to be installed prior to build in order to satisfy
524    # #include <paso/Common.h>
525    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
526    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
527    
528    env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
529    env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
530    
531    env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
532    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escriptcore_py', 'install_escript_py'])
533    
534    env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
535    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
536    
537    env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
538    env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
539    
540    env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
541    env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
542    
543    env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
544    env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
545    
546    env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
547    env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
548    
549    env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
550    env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
551    
552    # Now gather all the above into some easy targets: build_all and install_all
553    build_all_list = []
554    build_all_list += ['build_esysUtils']
555    build_all_list += ['build_paso']
556    build_all_list += ['build_escript']
557    build_all_list += ['build_pasowrap']
558    build_all_list += ['build_dudley']
559    build_all_list += ['build_finley']
560    build_all_list += ['build_ripley']
561    build_all_list += ['build_weipa']
562    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
563    if env['usempi']:   build_all_list += ['build_pythonMPI']
564    build_all_list += ['build_escriptconvert']
565    env.Alias('build_all', build_all_list)
566    
567    install_all_list = []
568    install_all_list += ['target_init']
569    install_all_list += ['install_esysUtils']
570    install_all_list += ['install_paso']
571    install_all_list += ['install_escript']
572    install_all_list += ['install_pasowrap']
573    install_all_list += ['install_dudley']
574    install_all_list += ['install_finley']
575    install_all_list += ['install_ripley']
576    install_all_list += ['install_weipa']
577    if not IS_WINDOWS: install_all_list += ['install_escriptreader']
578    install_all_list += ['install_downunder_py']
579    install_all_list += ['install_modellib_py']
580    install_all_list += ['install_pycad_py']
581    if env['usempi']:   install_all_list += ['install_pythonMPI']
582    install_all_list += ['install_escriptconvert']
583    env.Alias('install_all', install_all_list)
584    
585    # Default target is install
586    env.Default('install_all')
587    
588    ################## Targets to build and run the test suite ###################
589    
590    if not env['cppunit']:
591        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C++ unit tests, CppUnit not found!";exit 1')
592        env.Alias('run_tests', test_msg)
593        env.Alias('build_tests', '')
594    env.Alias('run_tests', ['install_all'])
595    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
596    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
597    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
598    
599    ##################### Targets to build the documentation #####################
600    
601    env.Alias('pdfdocs',['user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])
602    env.Alias('basedocs', ['pdfdocs','examples_tarfile', 'examples_zipfile', 'api_doxygen'])
603    env.Alias('docs', ['basedocs', 'sphinxdoc'])
604    env.Alias('release_prep', ['docs', 'install_all'])
605    env.Alias('release_prep_old', ['basedocs', 'api_epydoc', 'install_all'])
606    
607    # The test scripts are always generated, this target allows us to
608    # generate the testscripts without doing a full build
609    env.Alias('testscripts',[])
610    
611    if not IS_WINDOWS:
612        generateTestScripts(env, TestGroups)
613    
614    
615    
616    ######################## Summarize our environment ###########################
617    def print_summary():
618        print("")
619        print("*** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***")
620        print("Escript/Finley revision %s"%global_revision)
621        print("  Install prefix:  %s"%env['prefix'])
622        print("          Python:  %s"%sysconfig.PREFIX)
623        print("           boost:  %s"%env['boost_prefix'])
624        if env['numpy_h']:
625            print("           numpy:  YES (with headers)")
626        else:
627            print("           numpy:  YES (without headers)")
628        if env['usempi']:
629            print("             MPI:  YES (flavour: %s)"%env['mpi'])
630        else:
631            print("             MPI:  DISABLED")
632        if env['uselapack']:
633            print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
634        else:
635            print("          LAPACK:  DISABLED")
636        d_list=[]
637        e_list=[]
638        for i in 'debug','openmp','boomeramg','gdal','mkl','netcdf','papi','parmetis','pyproj','scipy','silo','sympy','umfpack','visit','vsl_random':
639            if env[i]: e_list.append(i)
640            else: d_list.append(i)
641        for i in e_list:
642            print("%16s:  YES"%i)
643        for i in d_list:
644            print("%16s:  DISABLED"%i)
645        if env['cppunit']:
646            print("         CppUnit:  FOUND")
647        else:
648            print("         CppUnit:  NOT FOUND")
649        if env['gmsh']=='m':
650            print("            gmsh:  FOUND, MPI-ENABLED")
651        elif env['gmsh']=='s':
652            print("            gmsh:  FOUND")
653        else:
654            print("            gmsh:  NOT FOUND")
655    
656        if ((fatalwarning != '') and (env['werror'])):
657            print("  Treating warnings as errors")
658        else:
659            print("  NOT treating warnings as errors")
660        print("")
661        for w in env['warnings']:
662            print("WARNING: %s"%w)
663    
664  syslib_install_target = env.installDirectory(sys_libinstall,libinstall)  atexit.register(print_summary)
 syspy_install_target = env.installDirectory(sys_pyinstall,pyinstall,recursive=True)  
665    
 install_target = env.Alias("install", env.Flatten([syslib_install_target, syspy_install_target]) )  

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