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revision 3784 by caltinay, Wed Jan 25 01:31:42 2012 UTC revision 4640 by jfenwick, Fri Jan 31 00:56:51 2014 UTC
# Line 1  Line 1 
1  ########################################################  ##############################################################################
2  #  #
3  # Copyright (c) 2003-2010 by University of Queensland  # Copyright (c) 2003-2013 by University of Queensland
4  # Earth Systems Science Computational Center (ESSCC)  # http://www.uq.edu.au
 # http://www.uq.edu.au/esscc  
5  #  #
6  # Primary Business: Queensland, Australia  # Primary Business: Queensland, Australia
7  # Licensed under the Open Software License version 3.0  # Licensed under the Open Software License version 3.0
8  # http://www.opensource.org/licenses/osl-3.0.php  # http://www.opensource.org/licenses/osl-3.0.php
9  #  #
10  ########################################################  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)
11    # Development since 2012 by School of Earth Sciences
12    #
13    ##############################################################################
14    
15  EnsureSConsVersion(0,98,1)  EnsureSConsVersion(0,98,1)
16  EnsurePythonVersion(2,5)  EnsurePythonVersion(2,5)
17    
18  import sys, os, platform, re  import atexit, sys, os, platform, re
19  from distutils import sysconfig  from distutils import sysconfig
20    from dependencies import *
21  from site_init import *  from site_init import *
22    
23  # Version number to check for in options file. Increment when new features are  # Version number to check for in options file. Increment when new features are
# Line 24  REQUIRED_OPTS_VERSION=201 Line 27  REQUIRED_OPTS_VERSION=201
27  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
28  IS_WINDOWS = (os.name == 'nt')  IS_WINDOWS = (os.name == 'nt')
29    
30    IS_OSX = (os.uname()[0] == 'Darwin')
31    
32  ########################## Determine options file ############################  ########################## Determine options file ############################
33  # 1. command line  # 1. command line
34  # 2. scons/<hostname>_options.py  # 2. scons/<hostname>_options.py
# Line 40  if not options_file: Line 45  if not options_file:
45  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
46      print("\nWARNING:\nOptions file %s" % options_file)      print("\nWARNING:\nOptions file %s" % options_file)
47      print("not found! Default options will be used which is most likely suboptimal.")      print("not found! Default options will be used which is most likely suboptimal.")
48      print("It is recommended that you copy one of the TEMPLATE files in the scons/")      print("We recommend that you copy one of the TEMPLATE files in the scons/")
49      print("subdirectory and customize it to your needs.\n")      print("subdirectory and customize it to your needs.\n")
50      options_file = None      options_file = None
51    
# Line 57  vars.AddVariables( Line 62  vars.AddVariables(
62    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
63    BoolVariable('verbose', 'Output full compile/link lines', False),    BoolVariable('verbose', 'Output full compile/link lines', False),
64  # Compiler/Linker options  # Compiler/Linker options
   ('cc', 'Path to C compiler', 'default'),  
65    ('cxx', 'Path to C++ compiler', 'default'),    ('cxx', 'Path to C++ compiler', 'default'),
66    ('cc_flags', 'Base C/C++ compiler flags', 'default'),    ('cc_flags', 'Base C++ compiler flags', 'default'),
67    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),    ('cc_optim', 'Additional C++ flags for a non-debug build', 'default'),
68    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),    ('cc_debug', 'Additional C++ flags for a debug build', 'default'),
   ('cc_extra', 'Extra C compiler flags', ''),  
69    ('cxx_extra', 'Extra C++ compiler flags', ''),    ('cxx_extra', 'Extra C++ compiler flags', ''),
70    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
71    BoolVariable('werror','Treat compiler warnings as errors', True),    BoolVariable('werror','Treat compiler warnings as errors', True),
# Line 108  vars.AddVariables( Line 111  vars.AddVariables(
111    BoolVariable('visit', 'Enable the VisIt simulation interface', False),    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
112    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
113    ('visit_libs', 'VisIt libraries to link with', ['simV2']),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
   BoolVariable('pyvisi', 'Enable pyvisi (deprecated, requires VTK module)', False),  
114    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
115  # Advanced settings  # Advanced settings
116    #dudley_assemble_flags = -funroll-loops      to actually do something    #dudley_assemble_flags = -funroll-loops      to actually do something
# Line 126  vars.AddVariables( Line 128  vars.AddVariables(
128    ('sys_libs', 'Extra libraries to link with', []),    ('sys_libs', 'Extra libraries to link with', []),
129    ('escript_opts_version', 'Version of options file (do not specify on command line)'),    ('escript_opts_version', 'Version of options file (do not specify on command line)'),
130    ('SVN_VERSION', 'Do not use from options file', -2),    ('SVN_VERSION', 'Do not use from options file', -2),
131      ('pythoncmd', 'which python to compile with','python'),
132      ('usepython3', 'Is this a python3 build? (experimental)', False),
133      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
134      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
135      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
136      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
137  )  )
138    
139  ##################### Create environment and help text #######################  ##################### Create environment and help text #######################
# Line 137  vars.AddVariables( Line 145  vars.AddVariables(
145  # in default locations.  # in default locations.
146  env = Environment(tools = ['default'], options = vars,  env = Environment(tools = ['default'], options = vars,
147                    ENV = {'PATH': os.environ['PATH']})                    ENV = {'PATH': os.environ['PATH']})
148    
149    # set the vars for clang
150    def mkclang(env):
151        env['CXX']='clang++'
152    
153  if env['tools_names'] != 'default':  if env['tools_names'] != 'default':
154        zz=env['tools_names']
155        if 'clang' in zz:
156            zz.remove('clang')
157            zz.insert(0, mkclang)
158      env = Environment(tools = ['default'] + env['tools_names'], options = vars,      env = Environment(tools = ['default'] + env['tools_names'], options = vars,
159                        ENV = {'PATH' : os.environ['PATH']})                        ENV = {'PATH' : os.environ['PATH']})
160    
# Line 163  if len(vars.UnknownVariables())>0: Line 180  if len(vars.UnknownVariables())>0:
180          print("Unknown option '%s'" % k)          print("Unknown option '%s'" % k)
181      Exit(1)      Exit(1)
182    
183    # create dictionary which will be populated with info for buildvars file
184    env['buildvars']={}
185    # create list which will be populated with warnings if there are any
186    env['warnings']=[]
187    
188  #################### Make sure install directories exist #####################  #################### Make sure install directories exist #####################
189    
190  env['BUILD_DIR']=env['build_dir']  env['BUILD_DIR']=Dir(env['build_dir']).abspath
191  prefix=Dir(env['prefix']).abspath  prefix=Dir(env['prefix']).abspath
192    env['buildvars']['prefix']=prefix
193  env['incinstall'] = os.path.join(prefix, 'include')  env['incinstall'] = os.path.join(prefix, 'include')
194  env['bininstall'] = os.path.join(prefix, 'bin')  env['bininstall'] = os.path.join(prefix, 'bin')
195  env['libinstall'] = os.path.join(prefix, 'lib')  env['libinstall'] = os.path.join(prefix, 'lib')
# Line 183  env.Append(LIBPATH = [env['libinstall']] Line 206  env.Append(LIBPATH = [env['libinstall']]
206    
207  ################# Fill in compiler options if not set above ##################  ################# Fill in compiler options if not set above ##################
208    
 if env['cc'] != 'default': env['CC']=env['cc']  
209  if env['cxx'] != 'default': env['CXX']=env['cxx']  if env['cxx'] != 'default': env['CXX']=env['cxx']
210    
211  # version >=9 of intel C++ compiler requires use of icpc to link in C++  # version >=9 of intel C++ compiler requires use of icpc to link in C++
# Line 201  fatalwarning = '' # switch to turn warni Line 223  fatalwarning = '' # switch to turn warni
223  sysheaderopt = '' # how to indicate that a header is a system header  sysheaderopt = '' # how to indicate that a header is a system header
224    
225  # env['CC'] might be a full path  # env['CC'] might be a full path
226  cc_name=os.path.basename(env['CC'])  cc_name=os.path.basename(env['CXX'])
227    
228  if cc_name == 'icc':  if cc_name == 'icpc':
229      # Intel compiler      # Intel compiler
230      cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"      # #1875: offsetof applied to non-POD types is nonstandard (in boost)
231      cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"      # removed -std=c99 because icpc doesn't like it and we aren't using c anymore
232        cc_flags    = "-fPIC -w2 -wd1875 -Wno-unknown-pragmas -DBLOCKTIMER -DCORE_ID1"
233        cc_optim    = "-O3 -ftz -fno-alias -ipo -xHost"
234      cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"      cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
235      omp_flags   = "-openmp -openmp_report0"      omp_flags   = "-openmp"
236      omp_ldflags = "-openmp -openmp_report0 -lguide -lpthread"      omp_ldflags = "-openmp -openmp_report=1"
237      fatalwarning = "-Werror"      fatalwarning = "-Werror"
238  elif cc_name[:3] == 'gcc':  elif cc_name[:3] == 'g++':
239      # GNU C on any system      # GNU C on any system
240      cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"      # note that -ffast-math is not used because it breaks isnan(),
241        # see mantis #691
242        cc_flags     = "-pedantic -Wall -fPIC -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
243      cc_optim     = "-O3"      cc_optim     = "-O3"
244      cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"      cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
245      omp_flags    = "-fopenmp"      omp_flags    = "-fopenmp"
# Line 234  elif cc_name == 'icl': Line 260  elif cc_name == 'icl':
260      omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'      omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
261      omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'      omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
262    
263    env['sysheaderopt']=sysheaderopt
264    
265  # set defaults if not otherwise specified  # set defaults if not otherwise specified
266  if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags  if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
267  if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim  if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
268  if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug  if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
269  if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags  if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
270  if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags  if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
 if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])  
271  if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])  if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
272  if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])  if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
273    
274    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
275    
276    if env['usepython3']:
277        env.Append(CPPDEFINES=['ESPYTHON3'])
278    
279  # set up the autolazy values  # set up the autolazy values
280  if env['forcelazy'] == 'on':  if env['forcelazy'] == 'on':
281      env.Append(CPPDEFINES=['FAUTOLAZYON'])      env.Append(CPPDEFINES=['FAUTOLAZYON'])
# Line 262  if env['iknowwhatimdoing']: Line 294  if env['iknowwhatimdoing']:
294    
295  # Disable OpenMP if no flags provided  # Disable OpenMP if no flags provided
296  if env['openmp'] and env['omp_flags'] == '':  if env['openmp'] and env['omp_flags'] == '':
297     print("OpenMP requested but no flags provided - disabling OpenMP!")     env['warnings'].append("OpenMP requested but no flags provided - disabling OpenMP!")
298     env['openmp'] = False     env['openmp'] = False
299    
300  if env['openmp']:  if env['openmp']:
# Line 272  else: Line 304  else:
304      env['omp_flags']=''      env['omp_flags']=''
305      env['omp_ldflags']=''      env['omp_ldflags']=''
306    
307    env['buildvars']['openmp']=int(env['openmp'])
308    
309  # add debug/non-debug compiler flags  # add debug/non-debug compiler flags
310    env['buildvars']['debug']=int(env['debug'])
311  if env['debug']:  if env['debug']:
312      env.Append(CCFLAGS = env['cc_debug'])      env.Append(CCFLAGS = env['cc_debug'])
313  else:  else:
# Line 284  env.Append(CCFLAGS = env['cc_flags']) Line 319  env.Append(CCFLAGS = env['cc_flags'])
319  # add system libraries  # add system libraries
320  env.AppendUnique(LIBS = env['sys_libs'])  env.AppendUnique(LIBS = env['sys_libs'])
321    
322    # determine svn revision
323  global_revision=ARGUMENTS.get('SVN_VERSION', None)  global_revision=ARGUMENTS.get('SVN_VERSION', None)
324  if global_revision:  if global_revision:
325      global_revision = re.sub(':.*', '', global_revision)      global_revision = re.sub(':.*', '', global_revision)
# Line 300  else: Line 335  else:
335    except:    except:
336      global_revision = '-1'      global_revision = '-1'
337  env['svn_revision']=global_revision  env['svn_revision']=global_revision
338    env['buildvars']['svn_revision']=global_revision
339  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
340    
341  if IS_WINDOWS:  if IS_WINDOWS:
# Line 307  if IS_WINDOWS: Line 343  if IS_WINDOWS:
343          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
344          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
345    
346    # VSL random numbers
347    env['buildvars']['vsl_random']=int(env['vsl_random'])
348    if env['vsl_random']:
349        env.Append(CPPDEFINES = ['MKLRANDOM'])
350    
351    env['IS_WINDOWS']=IS_WINDOWS
352    
353  ###################### Copy required environment vars ########################  ###################### Copy required environment vars ########################
354    
355  # Windows doesn't use LD_LIBRARY_PATH but PATH instead  # Windows doesn't use LD_LIBRARY_PATH but PATH instead
# Line 316  if IS_WINDOWS: Line 359  if IS_WINDOWS:
359  else:  else:
360      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
361    
362    env['LD_LIBRARY_PATH_KEY']=LD_LIBRARY_PATH_KEY
363    
364  # the following env variables are exported for the unit tests  # the following env variables are exported for the unit tests
365    
366  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
# Line 325  for key in 'OMP_NUM_THREADS', 'ESCRIPT_N Line 370  for key in 'OMP_NUM_THREADS', 'ESCRIPT_N
370          env['ENV'][key] = 1          env['ENV'][key] = 1
371    
372  env_export=env['env_export']  env_export=env['env_export']
373  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP'])
374    
375  for key in set(env_export):  for key in set(env_export):
376      try:      try:
# Line 338  try: Line 383  try:
383  except KeyError:  except KeyError:
384      pass      pass
385    
386    if IS_OSX:
387      try:
388        env.PrependENVPath('DYLD_LIBRARY_PATH', os.environ['DYLD_LIBRARY_PATH'])
389      except KeyError:
390        pass
391    
392    
393  # these shouldn't be needed  # these shouldn't be needed
394  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
395  #    try:  #    try:
# Line 352  except KeyError: Line 404  except KeyError:
404    
405  ######################## Add some custom builders ############################  ######################## Add some custom builders ############################
406    
407  py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  if env['pythoncmd']=='python':
408        py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
409    else:
410        py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
411  env.Append(BUILDERS = {'PyCompile' : py_builder});  env.Append(BUILDERS = {'PyCompile' : py_builder});
412    
413  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
# Line 366  env.Append(BUILDERS = {'EpsToPDF' : epst Line 421  env.Append(BUILDERS = {'EpsToPDF' : epst
421    
422  ############################ Dependency checks ###############################  ############################ Dependency checks ###############################
423    
424  # Create a Configure() environment to check for compilers and python  ######## Compiler
425  conf = Configure(env.Clone())  env=checkCompiler(env)
   
 ######## Test that the compilers work  
   
 if 'CheckCC' in dir(conf): # exists since scons 1.1.0  
     if not conf.CheckCC():  
         print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))  
         Exit(1)  
     if not conf.CheckCXX():  
         print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))  
         Exit(1)  
 else:  
     if not conf.CheckFunc('printf', language='c'):  
         print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))  
         Exit(1)  
     if not conf.CheckFunc('printf', language='c++'):  
         print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))  
         Exit(1)  
   
 if conf.CheckFunc('gethostname'):  
     conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
426    
427  ######## Python headers & library (required)  ######## Python headers & library (required)
428    env=checkPython(env)
429    
430  python_inc_path=sysconfig.get_python_inc()  ######## boost & boost-python (required)
431  if IS_WINDOWS:  env=checkBoost(env)
     python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')  
 elif env['PLATFORM']=='darwin':  
     python_lib_path=sysconfig.get_config_var('LIBPL')  
 else:  
     python_lib_path=sysconfig.get_config_var('LIBDIR')  
 #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux  
 if IS_WINDOWS:  
     python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]  
 else:  
     python_libs=['python'+sysconfig.get_python_version()]  
   
 if sysheaderopt == '':  
     conf.env.AppendUnique(CPPPATH = [python_inc_path])  
 else:  
     conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])  
   
 conf.env.AppendUnique(LIBPATH = [python_lib_path])  
 conf.env.AppendUnique(LIBS = python_libs)  
 # The wrapper script needs to find the libs  
 conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)  
   
 if not conf.CheckCHeader('Python.h'):  
     print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))  
     Exit(1)  
 if not conf.CheckFunc('Py_Exit'):  
     print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))  
     Exit(1)  
   
 # reuse conf to check for numpy header (optional)  
 if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):  
     conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])  
     conf.env['numpy_h']=True  
 else:  
     conf.env['numpy_h']=False  
   
 # Commit changes to environment  
 env = conf.Finish()  
432    
433  ######## boost (required)  ######## numpy (required) and numpy headers (optional)
434    env=checkNumpy(env)
 boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')  
 if sysheaderopt == '':  
     env.AppendUnique(CPPPATH = [boost_inc_path])  
 else:  
     # This is required because we can't -isystem /usr/include since it breaks  
     # std includes  
     if os.path.normpath(boost_inc_path) == '/usr/include':  
         conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])  
     else:  
         env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])  
   
 env.AppendUnique(LIBPATH = [boost_lib_path])  
 env.AppendUnique(LIBS = env['boost_libs'])  
 env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)  
   
 ######## numpy (required)  
   
 try:  
     from numpy import identity  
 except ImportError:  
     print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)  
     Exit(1)  
435    
436  ######## CppUnit (required for tests)  ######## CppUnit (required for tests)
437    env=checkCppUnit(env)
438    
439  try:  ######## optional python modules (sympy, pyproj)
440      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')  env=checkOptionalModules(env)
     env.AppendUnique(CPPPATH = [cppunit_inc_path])  
     env.AppendUnique(LIBPATH = [cppunit_lib_path])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)  
     env['cppunit']=True  
 except:  
     env['cppunit']=False  
   
 ######## VTK (optional)  
441    
442  if env['pyvisi']:  ######## optional dependencies (netCDF, PAPI, MKL, UMFPACK, Lapack, Silo, ...)
443      try:  env=checkOptionalLibraries(env)
         import vtk  
         env['pyvisi'] = True  
     except ImportError:  
         print("Cannot import vtk, disabling pyvisi.")  
         env['pyvisi'] = False  
   
 ######## netCDF (optional)  
   
 netcdf_inc_path=''  
 netcdf_lib_path=''  
 if env['netcdf']:  
     netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')  
     env.AppendUnique(CPPPATH = [netcdf_inc_path])  
     env.AppendUnique(LIBPATH = [netcdf_lib_path])  
     env.AppendUnique(LIBS = env['netcdf_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)  
     env.Append(CPPDEFINES = ['USE_NETCDF'])  
   
 ######## PAPI (optional)  
   
 papi_inc_path=''  
 papi_lib_path=''  
 if env['papi']:  
     papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [papi_inc_path])  
     env.AppendUnique(LIBPATH = [papi_lib_path])  
     env.AppendUnique(LIBS = env['papi_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)  
     env.Append(CPPDEFINES = ['BLOCKPAPI'])  
   
 ######## MKL (optional)  
   
 mkl_inc_path=''  
 mkl_lib_path=''  
 if env['mkl']:  
     mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [mkl_inc_path])  
     env.AppendUnique(LIBPATH = [mkl_lib_path])  
     env.AppendUnique(LIBS = env['mkl_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)  
     env.Append(CPPDEFINES = ['MKL'])  
   
 ######## UMFPACK (optional)  
   
 umfpack_inc_path=''  
 umfpack_lib_path=''  
 if env['umfpack']:  
     umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [umfpack_inc_path])  
     env.AppendUnique(LIBPATH = [umfpack_lib_path])  
     env.AppendUnique(LIBS = env['umfpack_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)  
     env.Append(CPPDEFINES = ['UMFPACK'])  
   
 ######## LAPACK (optional)  
   
 if env['lapack']=='mkl' and not env['mkl']:  
     print("mkl_lapack requires MKL!")  
     Exit(1)  
   
 env['uselapack'] = env['lapack']!='none'  
 lapack_inc_path=''  
 lapack_lib_path=''  
 if env['uselapack']:  
     header='clapack.h'  
     if env['lapack']=='mkl':  
         env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])  
         header='mkl_lapack.h'  
     lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [lapack_inc_path])  
     env.AppendUnique(LIBPATH = [lapack_lib_path])  
     env.AppendUnique(LIBS = env['lapack_libs'])  
     env.Append(CPPDEFINES = ['USE_LAPACK'])  
   
 ######## Silo (optional)  
   
 silo_inc_path=''  
 silo_lib_path=''  
 if env['silo']:  
     silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [silo_inc_path])  
     env.AppendUnique(LIBPATH = [silo_lib_path])  
     # Note that we do not add the libs since they are only needed for the  
     # weipa library and tools.  
     #env.AppendUnique(LIBS = [env['silo_libs']])  
   
 ######## VSL random numbers (optional)  
 if env['vsl_random']:  
     env.Append(CPPDEFINES = ['MKLRANDOM'])  
   
 ######## VisIt (optional)  
   
 visit_inc_path=''  
 visit_lib_path=''  
 if env['visit']:  
     visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [visit_inc_path])  
     env.AppendUnique(LIBPATH = [visit_lib_path])  
   
 ######## MPI (optional)  
   
 if env['mpi']=='no':  
     env['mpi']='none'  
   
 env['usempi'] = env['mpi']!='none'  
 mpi_inc_path=''  
 mpi_lib_path=''  
 if env['usempi']:  
     mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [mpi_inc_path])  
     env.AppendUnique(LIBPATH = [mpi_lib_path])  
     env.AppendUnique(LIBS = env['mpi_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)  
     env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])  
     # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!  
     # On the other hand MPT and OpenMPI don't define the latter so we have to  
     # do that here  
     if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:  
         env.Append(CPPDEFINES = ['MPI_INCLUDED'])  
   
 ######## BOOMERAMG (optional)  
   
 if env['mpi'] == 'none': env['boomeramg'] = False  
   
 boomeramg_inc_path=''  
 boomeramg_lib_path=''  
 if env['boomeramg']:  
     boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [boomeramg_inc_path])  
     env.AppendUnique(LIBPATH = [boomeramg_lib_path])  
     env.AppendUnique(LIBS = env['boomeramg_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)  
     env.Append(CPPDEFINES = ['BOOMERAMG'])  
   
 ######## ParMETIS (optional)  
   
 if not env['usempi']: env['parmetis'] = False  
   
 parmetis_inc_path=''  
 parmetis_lib_path=''  
 if env['parmetis']:  
     parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [parmetis_inc_path])  
     env.AppendUnique(LIBPATH = [parmetis_lib_path])  
     env.AppendUnique(LIBS = env['parmetis_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)  
     env.Append(CPPDEFINES = ['USE_PARMETIS'])  
   
 ######## gmsh (optional, for tests)  
   
 try:  
     import subprocess  
     p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)  
     _,e=p.communicate()  
     if e.split().count("MPI"):  
         env['gmsh']='m'  
     else:  
         env['gmsh']='s'  
 except OSError:  
     env['gmsh']=False  
444    
445  ######## PDFLaTeX (for documentation)  ######## PDFLaTeX (for documentation)
446  if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):  env=checkPDFLatex(env)
     env['pdflatex']=True  
 else:  
     env['pdflatex']=False  
   
 ######################## Summarize our environment ###########################  
447    
448  # keep some of our install paths first in the list for the unit tests  # keep some of our install paths first in the list for the unit tests
449  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
# Line 646  env.PrependENVPath('PYTHONPATH', prefix) Line 451  env.PrependENVPath('PYTHONPATH', prefix)
451  env['ENV']['ESCRIPT_ROOT'] = prefix  env['ENV']['ESCRIPT_ROOT'] = prefix
452    
453  if not env['verbose']:  if not env['verbose']:
     env['CCCOMSTR'] = "Compiling $TARGET"  
454      env['CXXCOMSTR'] = "Compiling $TARGET"      env['CXXCOMSTR'] = "Compiling $TARGET"
     env['SHCCCOMSTR'] = "Compiling $TARGET"  
455      env['SHCXXCOMSTR'] = "Compiling $TARGET"      env['SHCXXCOMSTR'] = "Compiling $TARGET"
456      env['ARCOMSTR'] = "Linking $TARGET"      env['ARCOMSTR'] = "Linking $TARGET"
457      env['LINKCOMSTR'] = "Linking $TARGET"      env['LINKCOMSTR'] = "Linking $TARGET"
# Line 659  if not env['verbose']: Line 462  if not env['verbose']:
462      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
463      #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)      #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
464    
 print("")  
 print("*** Config Summary (see config.log and lib/buildvars for details) ***")  
 print("Escript/Finley revision %s"%global_revision)  
 print("  Install prefix:  %s"%env['prefix'])  
 print("          Python:  %s"%sysconfig.PREFIX)  
 print("           boost:  %s"%env['boost_prefix'])  
 print("           numpy:  YES")  
 if env['usempi']:  
     print("             MPI:  YES (flavour: %s)"%env['mpi'])  
 else:  
     print("             MPI:  DISABLED")  
 if env['uselapack']:  
     print("          LAPACK:  YES (flavour: %s)"%env['lapack'])  
 else:  
     print("          LAPACK:  DISABLED")  
 d_list=[]  
 e_list=[]  
 for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':  
     if env[i]: e_list.append(i)  
     else: d_list.append(i)  
 for i in e_list:  
     print("%16s:  YES"%i)  
 for i in d_list:  
     print("%16s:  DISABLED"%i)  
 if env['cppunit']:  
     print("         CppUnit:  FOUND")  
 else:  
     print("         CppUnit:  NOT FOUND")  
 if env['gmsh']=='m':  
     print("            gmsh:  FOUND, MPI-ENABLED")  
 elif env['gmsh']=='s':  
     print("            gmsh:  FOUND")  
 else:  
     print("            gmsh:  NOT FOUND")  
 if env['numpy_h']:  
     print("   numpy headers:  FOUND")  
 else:  
     print("   numpy headers:  NOT FOUND")  
       
 if ((fatalwarning != '') and (env['werror'])):  
     print("  Treating warnings as errors")  
 else:  
     print("  NOT treating warnings as errors")  
 print("")  
   
465  ####################### Configure the subdirectories #########################  ####################### Configure the subdirectories #########################
466    
467  from grouptest import *  # remove obsolete files
468    if not env['usempi']:
469        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
470        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
471    
472    from grouptest import *
473  TestGroups=[]  TestGroups=[]
474    
475  # keep an environment without warnings-as-errors  # keep an environment without warnings-as-errors
# Line 729  Export( Line 491  Export(
491  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
492  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
493  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
494  env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
495    
496    #This will pull in the escriptcore/py_src and escriptcore/test
497    env.SConscript(dirs = ['escriptcore/src'], variant_dir='$BUILD_DIR/$PLATFORM/escriptcore', duplicate=0)
498    #env.SConscript(dirs = ['escript/test'], variant_dir='$BUILD_DIR/$PLATFORM/escript/test', duplicate=0)
499  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
500  env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)  env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
501  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
502  env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
503    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
504    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
505  env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)  env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
 env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pyvisi', duplicate=0)  
506  env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)  env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
507  env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)  env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
508    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
509  env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)  env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
510    
 ######################## Populate the buildvars file #########################  
511    
512  # remove obsolete file  ######################## Populate the buildvars file #########################
 if not env['usempi']:  
     Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))  
     Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))  
   
 # Try to extract the boost version from version.hpp  
 boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))  
 boostversion='unknown'  
 try:  
     for line in boosthpp:  
         ver=re.match(r'#define BOOST_VERSION (\d+)',line)  
         if ver:  
             boostversion=ver.group(1)  
 except StopIteration:  
     pass  
 boosthpp.close()  
513    
514  buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')  write_buildvars(env)
 buildvars.write("svn_revision="+str(global_revision)+"\n")  
 buildvars.write("prefix="+prefix+"\n")  
 buildvars.write("cc="+env['CC']+"\n")  
 buildvars.write("cxx="+env['CXX']+"\n")  
 buildvars.write("python="+sys.executable+"\n")  
 buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")  
 buildvars.write("boost_inc_path="+boost_inc_path+"\n")  
 buildvars.write("boost_lib_path="+boost_lib_path+"\n")  
 buildvars.write("boost_version="+boostversion+"\n")  
 buildvars.write("debug=%d\n"%int(env['debug']))  
 buildvars.write("openmp=%d\n"%int(env['openmp']))  
 buildvars.write("mpi=%s\n"%env['mpi'])  
 buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)  
 buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)  
 buildvars.write("lapack=%s\n"%env['lapack'])  
 buildvars.write("pyvisi=%d\n"%env['pyvisi'])  
 buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))  
 for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':  
     buildvars.write("%s=%d\n"%(i, int(env[i])))  
     if env[i]:  
         buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))  
         buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))  
 buildvars.close()  
515    
516  ################### Targets to build and install libraries ###################  ################### Targets to build and install libraries ###################
517    
# Line 801  env.Alias('build_paso', ['install_paso_h Line 529  env.Alias('build_paso', ['install_paso_h
529  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
530    
531  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
532  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escriptcore_py', 'install_escript_py'])
533    
534  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
535  env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])  env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
536    
   
537  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
538  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
539    
540  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
541  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
542    
543    env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
544    env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
545    
546  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
547  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
548    
# Line 827  build_all_list += ['build_escript'] Line 557  build_all_list += ['build_escript']
557  build_all_list += ['build_pasowrap']  build_all_list += ['build_pasowrap']
558  build_all_list += ['build_dudley']  build_all_list += ['build_dudley']
559  build_all_list += ['build_finley']  build_all_list += ['build_finley']
560    build_all_list += ['build_ripley']
561  build_all_list += ['build_weipa']  build_all_list += ['build_weipa']
562  if not IS_WINDOWS: build_all_list += ['build_escriptreader']  if not IS_WINDOWS: build_all_list += ['build_escriptreader']
563  if env['usempi']:   build_all_list += ['build_pythonMPI']  if env['usempi']:   build_all_list += ['build_pythonMPI']
# Line 841  install_all_list += ['install_escript'] Line 572  install_all_list += ['install_escript']
572  install_all_list += ['install_pasowrap']  install_all_list += ['install_pasowrap']
573  install_all_list += ['install_dudley']  install_all_list += ['install_dudley']
574  install_all_list += ['install_finley']  install_all_list += ['install_finley']
575    install_all_list += ['install_ripley']
576  install_all_list += ['install_weipa']  install_all_list += ['install_weipa']
577  if not IS_WINDOWS: install_all_list += ['install_escriptreader']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
578  install_all_list += ['install_pyvisi_py']  install_all_list += ['install_downunder_py']
579  install_all_list += ['install_modellib_py']  install_all_list += ['install_modellib_py']
580  install_all_list += ['install_pycad_py']  install_all_list += ['install_pycad_py']
581  if env['usempi']:   install_all_list += ['install_pythonMPI']  if env['usempi']:   install_all_list += ['install_pythonMPI']
# Line 855  env.Default('install_all') Line 587  env.Default('install_all')
587    
588  ################## Targets to build and run the test suite ###################  ################## Targets to build and run the test suite ###################
589    
 test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')  
590  if not env['cppunit']:  if not env['cppunit']:
591        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C++ unit tests, CppUnit not found!";exit 1')
592      env.Alias('run_tests', test_msg)      env.Alias('run_tests', test_msg)
593        env.Alias('build_tests', '')
594  env.Alias('run_tests', ['install_all'])  env.Alias('run_tests', ['install_all'])
595  env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])  env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
596  env.Alias('build_full',['install_all','build_tests','build_py_tests'])  env.Alias('build_full',['install_all','build_tests','build_py_tests'])
# Line 865  env.Alias('build_PasoTests','$BUILD_DIR/ Line 598  env.Alias('build_PasoTests','$BUILD_DIR/
598    
599  ##################### Targets to build the documentation #####################  ##################### Targets to build the documentation #####################
600    
601  env.Alias('api_epydoc','install_all')  env.Alias('pdfdocs',['user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])
602  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])  env.Alias('basedocs', ['pdfdocs','examples_tarfile', 'examples_zipfile', 'api_doxygen'])
603    env.Alias('docs', ['basedocs', 'sphinxdoc'])
604  env.Alias('release_prep', ['docs', 'install_all'])  env.Alias('release_prep', ['docs', 'install_all'])
605    env.Alias('release_prep_old', ['basedocs', 'api_epydoc', 'install_all'])
606    
607    # The test scripts are always generated, this target allows us to
608    # generate the testscripts without doing a full build
609    env.Alias('testscripts',[])
610    
611  if not IS_WINDOWS:  if not IS_WINDOWS:
612      try:      generateTestScripts(env, TestGroups)
613          utest=open('utest.sh','w')  
         utest.write(GroupTest.makeHeader(env['PLATFORM']))  
         for tests in TestGroups:  
             utest.write(tests.makeString())  
         utest.close()  
         Execute(Chmod('utest.sh', 0755))  
         print("Generated utest.sh.")  
     except IOError:  
         print("Error attempting to write unittests file.")  
         Exit(1)  
614    
     # delete utest.sh upon cleanup  
     env.Clean('target_init', 'utest.sh')  
615    
616      # Make sure that the escript wrapper is in place  ######################## Summarize our environment ###########################
617      if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):  def print_summary():
618          print("Copying escript wrapper.")      print("")
619          Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))      print("*** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***")
620        print("Escript/Finley revision %s"%global_revision)
621        print("  Install prefix:  %s"%env['prefix'])
622        print("          Python:  %s"%sysconfig.PREFIX)
623        print("           boost:  %s"%env['boost_prefix'])
624        if env['numpy_h']:
625            print("           numpy:  YES (with headers)")
626        else:
627            print("           numpy:  YES (without headers)")
628        if env['usempi']:
629            print("             MPI:  YES (flavour: %s)"%env['mpi'])
630        else:
631            print("             MPI:  DISABLED")
632        if env['uselapack']:
633            print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
634        else:
635            print("          LAPACK:  DISABLED")
636        d_list=[]
637        e_list=[]
638        for i in 'debug','openmp','boomeramg','gdal','mkl','netcdf','papi','parmetis','pyproj','scipy','silo','sympy','umfpack','visit','vsl_random':
639            if env[i]: e_list.append(i)
640            else: d_list.append(i)
641        for i in e_list:
642            print("%16s:  YES"%i)
643        for i in d_list:
644            print("%16s:  DISABLED"%i)
645        if env['cppunit']:
646            print("         CppUnit:  FOUND")
647        else:
648            print("         CppUnit:  NOT FOUND")
649        if env['gmsh']=='m':
650            print("            gmsh:  FOUND, MPI-ENABLED")
651        elif env['gmsh']=='s':
652            print("            gmsh:  FOUND")
653        else:
654            print("            gmsh:  NOT FOUND")
655    
656        if ((fatalwarning != '') and (env['werror'])):
657            print("  Treating warnings as errors")
658        else:
659            print("  NOT treating warnings as errors")
660        print("")
661        for w in env['warnings']:
662            print("WARNING: %s"%w)
663    
664    atexit.register(print_summary)
665    

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