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trunk/SConstruct revision 4110 by jfenwick, Fri Dec 14 01:21:33 2012 UTC branches/diaplayground/SConstruct revision 5064 by caltinay, Fri Jun 20 05:24:53 2014 UTC
# Line 1  Line 1 
1  ##############################################################################  ##############################################################################
2  #  #
3  # Copyright (c) 2003-2012 by University of Queensland  # Copyright (c) 2003-2014 by University of Queensland
4  # http://www.uq.edu.au  # http://www.uq.edu.au
5  #  #
6  # Primary Business: Queensland, Australia  # Primary Business: Queensland, Australia
# Line 8  Line 8 
8  # http://www.opensource.org/licenses/osl-3.0.php  # http://www.opensource.org/licenses/osl-3.0.php
9  #  #
10  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)
11  # Development since 2012 by School of Earth Sciences  # Development 2012-2013 by School of Earth Sciences
12    # Development from 2014 by Centre for Geoscience Computing (GeoComp)
13  #  #
14  ##############################################################################  ##############################################################################
15    
16  EnsureSConsVersion(0,98,1)  EnsureSConsVersion(0,98,1)
17  EnsurePythonVersion(2,5)  EnsurePythonVersion(2,5)
18    
19  import sys, os, platform, re  import atexit, sys, os, platform, re
20  from distutils import sysconfig  from distutils import sysconfig
21    from dependencies import *
22  from site_init import *  from site_init import *
 from subprocess import PIPE, Popen  
23    
24  # Version number to check for in options file. Increment when new features are  # Version number to check for in options file. Increment when new features are
25  # added or existing options changed.  # added or existing options changed.
26  REQUIRED_OPTS_VERSION=201  REQUIRED_OPTS_VERSION=202
27    
28  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
29  IS_WINDOWS = (os.name == 'nt')  IS_WINDOWS = (os.name == 'nt')
30    
31    IS_OSX = (os.uname()[0] == 'Darwin')
32    
33  ########################## Determine options file ############################  ########################## Determine options file ############################
34  # 1. command line  # 1. command line
35  # 2. scons/<hostname>_options.py  # 2. scons/<hostname>_options.py
# Line 43  if not options_file: Line 46  if not options_file:
46  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
47      print("\nWARNING:\nOptions file %s" % options_file)      print("\nWARNING:\nOptions file %s" % options_file)
48      print("not found! Default options will be used which is most likely suboptimal.")      print("not found! Default options will be used which is most likely suboptimal.")
49      print("It is recommended that you copy one of the TEMPLATE files in the scons/")      print("We recommend that you copy the most relavent options file in the scons/os/")
50      print("subdirectory and customize it to your needs.\n")      print("subdirectory and customize it to your needs.\n")
51      options_file = None      options_file = None
52    
# Line 60  vars.AddVariables( Line 63  vars.AddVariables(
63    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
64    BoolVariable('verbose', 'Output full compile/link lines', False),    BoolVariable('verbose', 'Output full compile/link lines', False),
65  # Compiler/Linker options  # Compiler/Linker options
   ('cc', 'Path to C compiler', 'default'),  
66    ('cxx', 'Path to C++ compiler', 'default'),    ('cxx', 'Path to C++ compiler', 'default'),
67    ('cc_flags', 'Base C/C++ compiler flags', 'default'),    ('cc_flags', 'Base C++ compiler flags', 'default'),
68    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),    ('cc_optim', 'Additional C++ flags for a non-debug build', 'default'),
69    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),    ('cc_debug', 'Additional C++ flags for a debug build', 'default'),
   ('cc_extra', 'Extra C compiler flags', ''),  
70    ('cxx_extra', 'Extra C++ compiler flags', ''),    ('cxx_extra', 'Extra C++ compiler flags', ''),
71    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
72      ('nvcc', 'Path to CUDA compiler', 'default'),
73      ('nvccflags', 'Base CUDA compiler flags', 'default'),
74    BoolVariable('werror','Treat compiler warnings as errors', True),    BoolVariable('werror','Treat compiler warnings as errors', True),
75    BoolVariable('debug', 'Compile with debug flags', False),    BoolVariable('debug', 'Compile with debug flags', False),
76    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
# Line 112  vars.AddVariables( Line 115  vars.AddVariables(
115    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
116    ('visit_libs', 'VisIt libraries to link with', ['simV2']),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
117    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
118      BoolVariable('cuda', 'Enable GPU code with CUDA (requires thrust)', False),
119      ('thrust_prefix', 'Prefix/Paths to NVidia thrust installation', default_prefix),
120  # Advanced settings  # Advanced settings
121    #dudley_assemble_flags = -funroll-loops      to actually do something    #dudley_assemble_flags = -funroll-loops      to actually do something
122    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
# Line 134  vars.AddVariables( Line 139  vars.AddVariables(
139    ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),    ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
140    ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),    ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
141    BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),    BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
142      BoolVariable('compressed_files','Enables reading from compressed binary files', True),
143      ('compression_libs', 'Compression libraries to link with', ['boost_iostreams'])
144  )  )
145    
146  ##################### Create environment and help text #######################  ##################### Create environment and help text #######################
# Line 145  vars.AddVariables( Line 152  vars.AddVariables(
152  # in default locations.  # in default locations.
153  env = Environment(tools = ['default'], options = vars,  env = Environment(tools = ['default'], options = vars,
154                    ENV = {'PATH': os.environ['PATH']})                    ENV = {'PATH': os.environ['PATH']})
                     
155    
156  #set the vars for clang  # set the vars for clang
157  def mkclang(env):  def mkclang(env):
158    env['CC']='clang'      env['CXX']='clang++'
159    env['CXX']='clang++'  
                     
                     
160  if env['tools_names'] != 'default':  if env['tools_names'] != 'default':
161      zz=env['tools_names']      zz=env['tools_names']
162      if 'clang' in zz:      if 'clang' in zz:
# Line 183  if len(vars.UnknownVariables())>0: Line 187  if len(vars.UnknownVariables())>0:
187          print("Unknown option '%s'" % k)          print("Unknown option '%s'" % k)
188      Exit(1)      Exit(1)
189    
190    if env['cuda']:
191        env.Tool('nvcc')
192    
193    # create dictionary which will be populated with info for buildvars file
194    env['buildvars']={}
195    # create list which will be populated with warnings if there are any
196    env['warnings']=[]
197    
198  #################### Make sure install directories exist #####################  #################### Make sure install directories exist #####################
199    
200  env['BUILD_DIR']=Dir(env['build_dir']).abspath  env['BUILD_DIR']=Dir(env['build_dir']).abspath
201  prefix=Dir(env['prefix']).abspath  prefix=Dir(env['prefix']).abspath
202    env['buildvars']['prefix']=prefix
203  env['incinstall'] = os.path.join(prefix, 'include')  env['incinstall'] = os.path.join(prefix, 'include')
204  env['bininstall'] = os.path.join(prefix, 'bin')  env['bininstall'] = os.path.join(prefix, 'bin')
205  env['libinstall'] = os.path.join(prefix, 'lib')  env['libinstall'] = os.path.join(prefix, 'lib')
# Line 203  env.Append(LIBPATH = [env['libinstall']] Line 216  env.Append(LIBPATH = [env['libinstall']]
216    
217  ################# Fill in compiler options if not set above ##################  ################# Fill in compiler options if not set above ##################
218    
 if env['cc'] != 'default': env['CC']=env['cc']  
219  if env['cxx'] != 'default': env['CXX']=env['cxx']  if env['cxx'] != 'default': env['CXX']=env['cxx']
220    
221    if env['nvcc'] != 'default':
222        env['NVCC'] = env['nvcc']
223    else:
224        env['NVCC'] = 'nvcc'
225    
226  # version >=9 of intel C++ compiler requires use of icpc to link in C++  # version >=9 of intel C++ compiler requires use of icpc to link in C++
227  # runtimes (icc does not)  # runtimes (icc does not)
228  if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':  if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
# Line 221  fatalwarning = '' # switch to turn warni Line 238  fatalwarning = '' # switch to turn warni
238  sysheaderopt = '' # how to indicate that a header is a system header  sysheaderopt = '' # how to indicate that a header is a system header
239    
240  # env['CC'] might be a full path  # env['CC'] might be a full path
241  cc_name=os.path.basename(env['CC'])  cc_name=os.path.basename(env['CXX'])
242    
243  if cc_name == 'icc':  if cc_name == 'icpc':
244      # Intel compiler      # Intel compiler
245      # #1875: offsetof applied to non-POD types is nonstandard (in boost)      # #1875: offsetof applied to non-POD types is nonstandard (in boost)
246      cc_flags    = "-std=c99 -fPIC -w2 -wd1875 -Wno-unknown-pragmas -DBLOCKTIMER -DCORE_ID1"      # removed -std=c99 because icpc doesn't like it and we aren't using c anymore
247      cc_optim    = "-O3 -ftz -fno-alias -ipo -xHost"      cc_flags    = "-fPIC -w2 -wd1875 -Wno-unknown-pragmas"
248        cc_optim    = "-O3 -ftz -fno-alias -inline-level=2 -ipo -xHost"
249      cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"      cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
250      omp_flags   = "-openmp"      omp_flags   = "-openmp"
251      omp_ldflags = "-openmp -openmp_report=1"      omp_ldflags = "-openmp -openmp_report=1"
252      fatalwarning = "-Werror"      fatalwarning = "-Werror"
253  elif cc_name[:3] == 'gcc':  elif cc_name[:3] == 'g++':
254      # GNU C on any system      # GNU C on any system
255      cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"      # note that -ffast-math is not used because it breaks isnan(),
256        # see mantis #691
257        cc_flags     = "-pedantic -Wall -fPIC -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
258      cc_optim     = "-O3"      cc_optim     = "-O3"
259      cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"      cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK --param=max-vartrack-size=90000000" #avoids vartrack limit being exceeded with escriptcpp.cpp
260      omp_flags    = "-fopenmp"      omp_flags    = "-fopenmp"
261      omp_ldflags  = "-fopenmp"      omp_ldflags  = "-fopenmp"
262      fatalwarning = "-Werror"      fatalwarning = "-Werror"
# Line 255  elif cc_name == 'icl': Line 275  elif cc_name == 'icl':
275      omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'      omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
276      omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'      omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
277    
278    env['sysheaderopt']=sysheaderopt
279    
280  # set defaults if not otherwise specified  # set defaults if not otherwise specified
281  if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags  if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
282  if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim  if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
283  if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug  if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
284  if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags  if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
285  if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags  if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
 if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])  
286  if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])  if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
287  if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])  if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
288    
289    if env['nvccflags'] != 'default':
290        env['NVCCFLAGS'] = env['nvccflags']
291        env['SHNVCCFLAGS'] = env['nvccflags'] + ' -shared'
292    
293  if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')  if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
294    
295  if env['usepython3']:  if env['usepython3']:
# Line 288  if env['iknowwhatimdoing']: Line 313  if env['iknowwhatimdoing']:
313    
314  # Disable OpenMP if no flags provided  # Disable OpenMP if no flags provided
315  if env['openmp'] and env['omp_flags'] == '':  if env['openmp'] and env['omp_flags'] == '':
316     print("OpenMP requested but no flags provided - disabling OpenMP!")     env['warnings'].append("OpenMP requested but no flags provided - disabling OpenMP!")
317     env['openmp'] = False     env['openmp'] = False
318    
319  if env['openmp']:  if env['openmp']:
# Line 298  else: Line 323  else:
323      env['omp_flags']=''      env['omp_flags']=''
324      env['omp_ldflags']=''      env['omp_ldflags']=''
325    
326    env['buildvars']['openmp']=int(env['openmp'])
327    
328  # add debug/non-debug compiler flags  # add debug/non-debug compiler flags
329    env['buildvars']['debug']=int(env['debug'])
330  if env['debug']:  if env['debug']:
331      env.Append(CCFLAGS = env['cc_debug'])      env.Append(CCFLAGS = env['cc_debug'])
332  else:  else:
# Line 310  env.Append(CCFLAGS = env['cc_flags']) Line 338  env.Append(CCFLAGS = env['cc_flags'])
338  # add system libraries  # add system libraries
339  env.AppendUnique(LIBS = env['sys_libs'])  env.AppendUnique(LIBS = env['sys_libs'])
340    
341    # determine svn revision
342  global_revision=ARGUMENTS.get('SVN_VERSION', None)  global_revision=ARGUMENTS.get('SVN_VERSION', None)
343  if global_revision:  if global_revision:
344      global_revision = re.sub(':.*', '', global_revision)      global_revision = re.sub(':.*', '', global_revision)
# Line 326  else: Line 354  else:
354    except:    except:
355      global_revision = '-1'      global_revision = '-1'
356  env['svn_revision']=global_revision  env['svn_revision']=global_revision
357    env['buildvars']['svn_revision']=global_revision
358  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
359    
360  if IS_WINDOWS:  if IS_WINDOWS:
# Line 333  if IS_WINDOWS: Line 362  if IS_WINDOWS:
362          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
363          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
364    
365    # VSL random numbers
366    env['buildvars']['vsl_random']=int(env['vsl_random'])
367    if env['vsl_random']:
368        env.Append(CPPDEFINES = ['MKLRANDOM'])
369    
370    env['IS_WINDOWS']=IS_WINDOWS
371    
372  ###################### Copy required environment vars ########################  ###################### Copy required environment vars ########################
373    
374  # Windows doesn't use LD_LIBRARY_PATH but PATH instead  # Windows doesn't use LD_LIBRARY_PATH but PATH instead
# Line 342  if IS_WINDOWS: Line 378  if IS_WINDOWS:
378  else:  else:
379      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
380    
381    env['LD_LIBRARY_PATH_KEY']=LD_LIBRARY_PATH_KEY
382    
383  # the following env variables are exported for the unit tests  # the following env variables are exported for the unit tests
384    
385  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
# Line 351  for key in 'OMP_NUM_THREADS', 'ESCRIPT_N Line 389  for key in 'OMP_NUM_THREADS', 'ESCRIPT_N
389          env['ENV'][key] = 1          env['ENV'][key] = 1
390    
391  env_export=env['env_export']  env_export=env['env_export']
392  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP'])  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP','LD_PRELOAD'])
393    
394  for key in set(env_export):  for key in set(env_export):
395      try:      try:
# Line 364  try: Line 402  try:
402  except KeyError:  except KeyError:
403      pass      pass
404    
405    if IS_OSX:
406      try:
407        env.PrependENVPath('DYLD_LIBRARY_PATH', os.environ['DYLD_LIBRARY_PATH'])
408      except KeyError:
409        pass
410    
411    
412  # these shouldn't be needed  # these shouldn't be needed
413  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
414  #    try:  #    try:
# Line 395  env.Append(BUILDERS = {'EpsToPDF' : epst Line 440  env.Append(BUILDERS = {'EpsToPDF' : epst
440    
441  ############################ Dependency checks ###############################  ############################ Dependency checks ###############################
442    
443  # Create a Configure() environment to check for compilers and python  ######## Compiler
444  conf = Configure(env.Clone())  env=checkCompiler(env)
   
 ######## Test that the compilers work  
   
 if 'CheckCC' in dir(conf): # exists since scons 1.1.0  
     if not conf.CheckCC():  
         print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))  
         Exit(1)  
     if not conf.CheckCXX():  
         print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))  
         Exit(1)  
 else:  
     if not conf.CheckFunc('printf', language='c'):  
         print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))  
         Exit(1)  
     if not conf.CheckFunc('printf', language='c++'):  
         print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))  
         Exit(1)  
   
 if conf.CheckFunc('gethostname'):  
     conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
445    
446  ######## Python headers & library (required)  ######## Python headers & library (required)
447    env=checkPython(env)
448    
449  #First we check to see if the config file has specified  ######## boost & boost-python (required)
450  ##Where to find the filae. Ideally, this should be automatic  env=checkBoost(env)
 #But we need to deal with the case where python is not in its INSTALL  
 #Directory  
 # Use the python scons is running  
 if env['pythoncmd']=='python':  
     python_inc_path=sysconfig.get_python_inc()  
     if IS_WINDOWS:  
         python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')  
     elif env['PLATFORM']=='darwin':  
         python_lib_path=sysconfig.get_config_var('LIBPL')  
     else:  
         python_lib_path=sysconfig.get_config_var('LIBDIR')  
   
     #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux  
     if IS_WINDOWS:  
         python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]  
     else:  
         python_libs=['python'+sysconfig.get_python_version()]  
   
 #if we want to use a python other than the one scons is running  
 else:  
     initstring='from __future__ import print_function;from distutils import sysconfig;'  
     if env['pythonlibname']!='':  
         python_libs=env['pythonlibname']  
     else:   # work it out by calling python      
         if IS_WINDOWS:  
             cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'  
         else:  
             cmd='print("python"+sysconfig.get_python_version())'  
         p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)  
         python_libs=p.stdout.readline()  
         if env['usepython3']:       # This is to convert unicode str into py2 string  
             python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought  
         p.wait()  
         python_libs=python_libs.strip()  
   
     
     # Now we know whether we are using python3 or not  
     p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)  
     python_inc_path=p.stdout.readline()  
     if env['usepython3']:  
          python_inc_path=python_inc_path.encode()  
     p.wait()    
     python_inc_path=python_inc_path.strip()  
     if IS_WINDOWS:  
         cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"  
     elif env['PLATFORM']=='darwin':  
         cmd="sysconfig.get_config_var(\"LIBPL\")"  
     else:  
         cmd="sysconfig.get_config_var(\"LIBDIR\")"  
   
     p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)  
     python_lib_path=p.stdout.readline()  
     if env['usepython3']:  
         python_lib_path=python_lib_path.decode()  
     p.wait()  
     python_lib_path=python_lib_path.strip()  
   
 #Check for an override from the config file.  
 #Ideally, this should be automatic  
 #But we need to deal with the case where python is not in its INSTALL  
 #Directory  
 if env['pythonlibpath']!='':  
     python_lib_path=env['pythonlibpath']  
451    
452  if env['pythonincpath']!='':  ######## numpy (required) and numpy headers (optional)
453      python_inc_path=env['pythonincpath']  env=checkNumpy(env)
   
   
 if sysheaderopt == '':  
     conf.env.AppendUnique(CPPPATH = [python_inc_path])  
 else:  
     conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])  
   
 conf.env.AppendUnique(LIBPATH = [python_lib_path])  
 conf.env.AppendUnique(LIBS = python_libs)  
 # The wrapper script needs to find the libs  
 conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)  
   
 if not conf.CheckCHeader('Python.h'):  
     print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))  
     Exit(1)  
 if not conf.CheckFunc('Py_Exit'):  
     print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))  
     Exit(1)  
   
 ## reuse conf to check for numpy header (optional)  
 if env['usepython3']:  
     # FIXME: This is until we can work out how to make the checks in python 3  
     conf.env['numpy_h']=False  
 else:  
     if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):  
         conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])  
         conf.env['numpy_h']=True  
     else:  
         conf.env['numpy_h']=False  
   
 # Commit changes to environment  
 env = conf.Finish()  
   
 ######## boost (required)  
   
 boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')  
 if sysheaderopt == '':  
     env.AppendUnique(CPPPATH = [boost_inc_path])  
 else:  
     # This is required because we can't -isystem /usr/include since it breaks  
     # std includes  
     if os.path.normpath(boost_inc_path) == '/usr/include':  
         conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])  
     else:  
         env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])  
   
 env.AppendUnique(LIBPATH = [boost_lib_path])  
 env.AppendUnique(LIBS = env['boost_libs'])  
 env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)  
   
 ######## numpy (required)  
   
 if not detectModule(env, 'numpy'):  
     print("Cannot import numpy. If it is installed try setting your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)  
     Exit(1)  
454    
455  ######## CppUnit (required for tests)  ######## CppUnit (required for tests)
456    env=checkCppUnit(env)
457    
458  try:  ######## optional python modules (sympy, pyproj)
459      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')  env=checkOptionalModules(env)
     env.AppendUnique(CPPPATH = [cppunit_inc_path])  
     env.AppendUnique(LIBPATH = [cppunit_lib_path])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)  
     env['cppunit']=True  
 except:  
     env['cppunit']=False  
   
 ######## sympy (optional)  
460    
461  if detectModule(env, 'sympy'):  ######## optional dependencies (netCDF, PAPI, MKL, UMFPACK, Lapack, Silo, ...)
462      env['sympy'] = True  env=checkOptionalLibraries(env)
 else:  
     print("Cannot import sympy. Symbolic toolbox and nonlinear PDEs will not be available.")  
     env['sympy'] = False  
   
 ######## netCDF (optional)  
   
 netcdf_inc_path=''  
 netcdf_lib_path=''  
 if env['netcdf']:  
     netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')  
     env.AppendUnique(CPPPATH = [netcdf_inc_path])  
     env.AppendUnique(LIBPATH = [netcdf_lib_path])  
     env.AppendUnique(LIBS = env['netcdf_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)  
     env.Append(CPPDEFINES = ['USE_NETCDF'])  
   
 ######## PAPI (optional)  
   
 papi_inc_path=''  
 papi_lib_path=''  
 if env['papi']:  
     papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [papi_inc_path])  
     env.AppendUnique(LIBPATH = [papi_lib_path])  
     env.AppendUnique(LIBS = env['papi_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)  
     env.Append(CPPDEFINES = ['BLOCKPAPI'])  
   
 ######## MKL (optional)  
   
 mkl_inc_path=''  
 mkl_lib_path=''  
 if env['mkl']:  
     mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [mkl_inc_path])  
     env.AppendUnique(LIBPATH = [mkl_lib_path])  
     env.AppendUnique(LIBS = env['mkl_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)  
     env.Append(CPPDEFINES = ['MKL'])  
   
 ######## UMFPACK (optional)  
   
 umfpack_inc_path=''  
 umfpack_lib_path=''  
 if env['umfpack']:  
     umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [umfpack_inc_path])  
     env.AppendUnique(LIBPATH = [umfpack_lib_path])  
     env.AppendUnique(LIBS = env['umfpack_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)  
     env.Append(CPPDEFINES = ['UMFPACK'])  
   
 ######## LAPACK (optional)  
   
 if env['lapack']=='mkl' and not env['mkl']:  
     print("mkl_lapack requires MKL!")  
     Exit(1)  
   
 env['uselapack'] = env['lapack']!='none'  
 lapack_inc_path=''  
 lapack_lib_path=''  
 if env['uselapack']:  
     header='clapack.h'  
     if env['lapack']=='mkl':  
         env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])  
         header='mkl_lapack.h'  
     lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [lapack_inc_path])  
     env.AppendUnique(LIBPATH = [lapack_lib_path])  
     env.AppendUnique(LIBS = env['lapack_libs'])  
     env.Append(CPPDEFINES = ['USE_LAPACK'])  
   
 ######## Silo (optional)  
   
 silo_inc_path=''  
 silo_lib_path=''  
 if env['silo']:  
     silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [silo_inc_path])  
     env.AppendUnique(LIBPATH = [silo_lib_path])  
     # Note that we do not add the libs since they are only needed for the  
     # weipa library and tools.  
     #env.AppendUnique(LIBS = [env['silo_libs']])  
   
 ######## VSL random numbers (optional)  
 if env['vsl_random']:  
     env.Append(CPPDEFINES = ['MKLRANDOM'])  
   
 ######## VisIt (optional)  
   
 visit_inc_path=''  
 visit_lib_path=''  
 if env['visit']:  
     visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [visit_inc_path])  
     env.AppendUnique(LIBPATH = [visit_lib_path])  
   
 ######## MPI (optional)  
   
 if env['mpi']=='no':  
     env['mpi']='none'  
   
 env['usempi'] = env['mpi']!='none'  
 mpi_inc_path=''  
 mpi_lib_path=''  
 if env['usempi']:  
     mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [mpi_inc_path])  
     env.AppendUnique(LIBPATH = [mpi_lib_path])  
     env.AppendUnique(LIBS = env['mpi_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)  
     env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])  
     # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!  
     # On the other hand MPT and OpenMPI don't define the latter so we have to  
     # do that here  
     if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:  
         env.Append(CPPDEFINES = ['MPI_INCLUDED'])  
   
 ######## BOOMERAMG (optional)  
   
 if env['mpi'] == 'none': env['boomeramg'] = False  
   
 boomeramg_inc_path=''  
 boomeramg_lib_path=''  
 if env['boomeramg']:  
     boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [boomeramg_inc_path])  
     env.AppendUnique(LIBPATH = [boomeramg_lib_path])  
     env.AppendUnique(LIBS = env['boomeramg_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)  
     env.Append(CPPDEFINES = ['BOOMERAMG'])  
   
 ######## ParMETIS (optional)  
   
 if not env['usempi']: env['parmetis'] = False  
   
 parmetis_inc_path=''  
 parmetis_lib_path=''  
 if env['parmetis']:  
     parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')  
     env.AppendUnique(CPPPATH = [parmetis_inc_path])  
     env.AppendUnique(LIBPATH = [parmetis_lib_path])  
     env.AppendUnique(LIBS = env['parmetis_libs'])  
     env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)  
     env.Append(CPPDEFINES = ['USE_PARMETIS'])  
   
 ######## gmsh (optional, for tests)  
   
 try:  
     p=Popen(['gmsh', '-info'], stderr=PIPE)  
     _,e=p.communicate()  
     if e.split().count("MPI"):  
         env['gmsh']='m'  
     else:  
         env['gmsh']='s'  
 except OSError:  
     env['gmsh']=False  
463    
464  ######## PDFLaTeX (for documentation)  ######## PDFLaTeX (for documentation)
465  if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):  env=checkPDFLatex(env)
     env['pdflatex']=True  
 else:  
     env['pdflatex']=False  
   
 ######################## Summarize our environment ###########################  
466    
467  # keep some of our install paths first in the list for the unit tests  # keep some of our install paths first in the list for the unit tests
468  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
# Line 731  env.PrependENVPath('PYTHONPATH', prefix) Line 470  env.PrependENVPath('PYTHONPATH', prefix)
470  env['ENV']['ESCRIPT_ROOT'] = prefix  env['ENV']['ESCRIPT_ROOT'] = prefix
471    
472  if not env['verbose']:  if not env['verbose']:
     env['CCCOMSTR'] = "Compiling $TARGET"  
473      env['CXXCOMSTR'] = "Compiling $TARGET"      env['CXXCOMSTR'] = "Compiling $TARGET"
     env['SHCCCOMSTR'] = "Compiling $TARGET"  
474      env['SHCXXCOMSTR'] = "Compiling $TARGET"      env['SHCXXCOMSTR'] = "Compiling $TARGET"
475      env['ARCOMSTR'] = "Linking $TARGET"      env['ARCOMSTR'] = "Linking $TARGET"
476      env['LINKCOMSTR'] = "Linking $TARGET"      env['LINKCOMSTR'] = "Linking $TARGET"
# Line 744  if not env['verbose']: Line 481  if not env['verbose']:
481      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"      env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
482      #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)      #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
483    
 print("")  
 print("*** Config Summary (see config.log and lib/buildvars for details) ***")  
 print("Escript/Finley revision %s"%global_revision)  
 print("  Install prefix:  %s"%env['prefix'])  
 print("          Python:  %s"%sysconfig.PREFIX)  
 print("           boost:  %s"%env['boost_prefix'])  
 print("           numpy:  YES")  
 if env['usempi']:  
     print("             MPI:  YES (flavour: %s)"%env['mpi'])  
 else:  
     print("             MPI:  DISABLED")  
 if env['uselapack']:  
     print("          LAPACK:  YES (flavour: %s)"%env['lapack'])  
 else:  
     print("          LAPACK:  DISABLED")  
 d_list=[]  
 e_list=[]  
 for i in 'debug','openmp','boomeramg','mkl','netcdf','papi','parmetis','silo','sympy','umfpack','visit','vsl_random':  
     if env[i]: e_list.append(i)  
     else: d_list.append(i)  
 for i in e_list:  
     print("%16s:  YES"%i)  
 for i in d_list:  
     print("%16s:  DISABLED"%i)  
 if env['cppunit']:  
     print("         CppUnit:  FOUND")  
 else:  
     print("         CppUnit:  NOT FOUND")  
 if env['gmsh']=='m':  
     print("            gmsh:  FOUND, MPI-ENABLED")  
 elif env['gmsh']=='s':  
     print("            gmsh:  FOUND")  
 else:  
     print("            gmsh:  NOT FOUND")  
 if env['numpy_h']:  
     print("   numpy headers:  FOUND")  
 else:  
     print("   numpy headers:  NOT FOUND")  
 print("   vsl_random:  %s"%env['vsl_random'])  
       
 if ((fatalwarning != '') and (env['werror'])):  
     print("  Treating warnings as errors")  
 else:  
     print("  NOT treating warnings as errors")  
 print("")  
   
484  ####################### Configure the subdirectories #########################  ####################### Configure the subdirectories #########################
485    
486  from grouptest import *  # remove obsolete files
487    if not env['usempi']:
488        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
489        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
490    
491    from grouptest import *
492  TestGroups=[]  TestGroups=[]
493    
494  # keep an environment without warnings-as-errors  # keep an environment without warnings-as-errors
# Line 815  Export( Line 510  Export(
510  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
511  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
512  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
513  env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
514    
515    #This will pull in the escriptcore/py_src and escriptcore/test
516    env.SConscript(dirs = ['escriptcore/src'], variant_dir='$BUILD_DIR/$PLATFORM/escriptcore', duplicate=0)
517    #env.SConscript(dirs = ['escript/test'], variant_dir='$BUILD_DIR/$PLATFORM/escript/test', duplicate=0)
518  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
519  env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)  env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
520  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
# Line 831  env.SConscript(dirs = ['paso/profiling'] Line 530  env.SConscript(dirs = ['paso/profiling']
530    
531  ######################## Populate the buildvars file #########################  ######################## Populate the buildvars file #########################
532    
533  # remove obsolete file  write_buildvars(env)
 if not env['usempi']:  
     Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))  
     Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))  
   
 # Try to extract the boost version from version.hpp  
 boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))  
 boostversion='unknown'  
 try:  
     for line in boosthpp:  
         ver=re.match(r'#define BOOST_VERSION (\d+)',line)  
         if ver:  
             boostversion=ver.group(1)  
 except StopIteration:  
     pass  
 boosthpp.close()  
   
   
 buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')  
 buildvars.write("svn_revision="+str(global_revision)+"\n")  
 buildvars.write("prefix="+prefix+"\n")  
 buildvars.write("cc="+env['CC']+"\n")  
 buildvars.write("cxx="+env['CXX']+"\n")  
 if env['pythoncmd']=='python':  
     buildvars.write("python="+sys.executable+"\n")  
     buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")  
 else:  
     buildvars.write("python="+env['pythoncmd']+"\n")  
     p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)  
     verstring=p.stdout.readline().strip()  
     p.wait()  
     buildvars.write("python_version="+verstring+"\n")  
 buildvars.write("boost_inc_path="+boost_inc_path+"\n")  
 buildvars.write("boost_lib_path="+boost_lib_path+"\n")  
 buildvars.write("boost_version="+boostversion+"\n")  
 buildvars.write("debug=%d\n"%int(env['debug']))  
 buildvars.write("openmp=%d\n"%int(env['openmp']))  
 buildvars.write("mpi=%s\n"%env['mpi'])  
 buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)  
 buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)  
 buildvars.write("lapack=%s\n"%env['lapack'])  
 buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))  
 for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':  
     buildvars.write("%s=%d\n"%(i, int(env[i])))  
     if env[i]:  
         buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))  
         buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))  
 buildvars.close()  
534    
535  ################### Targets to build and install libraries ###################  ################### Targets to build and install libraries ###################
536    
# Line 887  env.Alias('target_init', [target_init]) Line 539  env.Alias('target_init', [target_init])
539  # delete buildvars upon cleanup  # delete buildvars upon cleanup
540  env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))  env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
541    
542    cusphdr_inst = env.Install(env['incinstall'], Dir('#cusplibrary/cusp'))
543    env.Alias('install_cusp_headers', cusphdr_inst)
544  # The headers have to be installed prior to build in order to satisfy  # The headers have to be installed prior to build in order to satisfy
545  # #include <paso/Common.h>  # #include <paso/Common.h>
546  env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])  env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
# Line 896  env.Alias('build_paso', ['install_paso_h Line 550  env.Alias('build_paso', ['install_paso_h
550  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
551    
552  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
553  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escriptcore_py', 'install_escript_py'])
554    
555  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
556  env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])  env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
# Line 907  env.Alias('install_dudley', ['build_dudl Line 561  env.Alias('install_dudley', ['build_dudl
561  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
562  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
563    
564  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])  env.Alias('build_ripley', ['install_cusp_headers', 'install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
565  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
566    
567  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
# Line 955  env.Default('install_all') Line 609  env.Default('install_all')
609  ################## Targets to build and run the test suite ###################  ################## Targets to build and run the test suite ###################
610    
611  if not env['cppunit']:  if not env['cppunit']:
612      test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')      test_msg = env.Command('.dummy.', None, '@echo "Cannot run C++ unit tests, CppUnit not found!";exit 1')
613      env.Alias('run_tests', test_msg)      env.Alias('run_tests', test_msg)
614        env.Alias('build_tests', '')
615  env.Alias('run_tests', ['install_all'])  env.Alias('run_tests', ['install_all'])
616  env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])  env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
617  env.Alias('build_full',['install_all','build_tests','build_py_tests'])  env.Alias('build_full',['install_all','build_tests','build_py_tests'])
# Line 964  env.Alias('build_PasoTests','$BUILD_DIR/ Line 619  env.Alias('build_PasoTests','$BUILD_DIR/
619    
620  ##################### Targets to build the documentation #####################  ##################### Targets to build the documentation #####################
621    
622  env.Alias('api_epydoc','install_all')  env.Alias('pdfdocs',['user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])
623  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'sphinxdoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])  env.Alias('basedocs', ['pdfdocs','examples_tarfile', 'examples_zipfile', 'api_doxygen'])
624    env.Alias('docs', ['basedocs', 'sphinxdoc'])
625  env.Alias('release_prep', ['docs', 'install_all'])  env.Alias('release_prep', ['docs', 'install_all'])
626    env.Alias('release_prep_old', ['basedocs', 'api_epydoc', 'install_all'])
627    
628  # The test scripts are always generated, this target allows us to  # The test scripts are always generated, this target allows us to
629  # generate the testscripts without doing a full build  # generate the testscripts without doing a full build
630  env.Alias('testscripts',[])  env.Alias('testscripts',[])
631    
632  if not IS_WINDOWS:  if not IS_WINDOWS:
633      try:      generateTestScripts(env, TestGroups)
634          utest=open('utest.sh','w')  
635          utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix, False))  
636          for tests in TestGroups:  
637              utest.write(tests.makeString())  ######################## Summarize our environment ###########################
638          utest.close()  def print_summary():
639          Execute(Chmod('utest.sh', 0o755))      print("")
640          print("Generated utest.sh.")      print("*** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***")
641          # This version contains only python tests - I want this to be usable      print("Escript/Finley revision %s"%global_revision)
642          # From a binary only install if you have the test files      print("  Install prefix:  %s"%env['prefix'])
643          utest=open('itest.sh','w')      print("          Python:  %s"%sysconfig.PREFIX)
644          utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix, True))      print("           boost:  %s"%env['boost_prefix'])
645          for tests in TestGroups:      if env['numpy_h']:
646            if tests.exec_cmd=='$PYTHONRUNNER ':          print("           numpy:  YES (with headers)")
647              utest.write(tests.makeString())      else:
648          utest.close()          print("           numpy:  YES (without headers)")
649          Execute(Chmod('itest.sh', 0o755))      if env['usempi']:
650          print("Generated itest.sh.")                  print("             MPI:  YES (flavour: %s)"%env['mpi'])
651      except IOError:      else:
652          print("Error attempting to write unittests file.")          print("             MPI:  DISABLED")
653          Exit(1)      if env['uselapack']:
654            print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
655        else:
656            print("          LAPACK:  DISABLED")
657        d_list=[]
658        e_list=[]
659        for i in 'debug','openmp','boomeramg','gdal','mkl','netcdf','papi','parmetis','pyproj','scipy','silo','sympy','umfpack','visit','vsl_random':
660            if env[i]: e_list.append(i)
661            else: d_list.append(i)
662        for i in e_list:
663            print("%16s:  YES"%i)
664        for i in d_list:
665            print("%16s:  DISABLED"%i)
666        if env['cppunit']:
667            print("         CppUnit:  FOUND")
668        else:
669            print("         CppUnit:  NOT FOUND")
670        if env['gmsh']=='m':
671            print("            gmsh:  FOUND, MPI-ENABLED")
672        elif env['gmsh']=='s':
673            print("            gmsh:  FOUND")
674        else:
675            print("            gmsh:  NOT FOUND")
676        print(    "            gzip:  " + ("YES" if env['compressed_files'] else "NO"))
677    
678        if ((fatalwarning != '') and (env['werror'])):
679            print("  Treating warnings as errors")
680        else:
681            print("  NOT treating warnings as errors")
682        print("")
683        for w in env['warnings']:
684            print("WARNING: %s"%w)
685        if len(GetBuildFailures()):
686            print("\nERROR: build stopped due to errors\n")
687        else:
688            print("\nSUCCESS: build complete\n")
689    
690      # delete utest.sh upon cleanup  atexit.register(print_summary)
     env.Clean('target_init', 'utest.sh')  
     env.Clean('target_init', 'itest.sh')  
   
     # Make sure that the escript wrapper is in place  
     if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):  
         print("Copying escript wrapper.")  
         Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))  
691    

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