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revision 1729 by ksteube, Tue Aug 26 06:48:40 2008 UTC revision 3975 by caltinay, Thu Sep 20 01:54:06 2012 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ########################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2012 by University of Queensland
4  #       Primary Business: Queensland, Australia  # Earth Systems Science Computational Center (ESSCC)
5  #  Licensed under the Open Software License version 3.0  # http://www.uq.edu.au/esscc
6  #     http://www.opensource.org/licenses/osl-3.0.php  #
7    # Primary Business: Queensland, Australia
8  EnsureSConsVersion(0,96,91)  # Licensed under the Open Software License version 3.0
9  EnsurePythonVersion(2,3)  # http://www.opensource.org/licenses/osl-3.0.php
10    #
11  import sys, os, re, socket  ########################################################
   
 # Add our extensions  
 if os.path.isdir('scons'): sys.path.append('scons')  
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
12    
13  # The string python2.4 or python2.5  EnsureSConsVersion(0,98,1)
14  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  EnsurePythonVersion(2,5)
15    
16  # MS Windows support, many thanks to PH  import sys, os, platform, re
17  IS_WINDOWS_PLATFORM = (os.name== "nt")  from distutils import sysconfig
18    from site_init import *
19    from subprocess import PIPE, Popen
20    
21    # Version number to check for in options file. Increment when new features are
22    # added or existing options changed.
23    REQUIRED_OPTS_VERSION=201
24    
25  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  # MS Windows support, many thanks to PH
26    IS_WINDOWS = (os.name == 'nt')
27    
28  # Read configuration options from file scons/<hostname>_options.py  ########################## Determine options file ############################
29  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  # 1. command line
30  tmp = os.path.join("scons",hostname+"_options.py")  # 2. scons/<hostname>_options.py
31  options_file = ARGUMENTS.get('options_file', tmp)  # 3. name as part of a cluster
32  if not os.path.isfile(options_file): options_file = False  options_file=ARGUMENTS.get('options_file', None)
33  else: print "Options file is", options_file  if not options_file:
34        ext_dir = os.path.join(os.getcwd(), 'scons')
35  # Load options file and command-line arguments      hostname = platform.node().split('.')[0]
36  opts = Options(options_file, ARGUMENTS)      for name in hostname, effectiveName(hostname):
37            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
38  ############ Load build options ################################          options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
39            if os.path.isfile(options_file): break
40  opts.AddOptions(  
41  # Where to install esys stuff  if not os.path.isfile(options_file):
42    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),      print("\nWARNING:\nOptions file %s" % options_file)
43    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),      print("not found! Default options will be used which is most likely suboptimal.")
44    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
45    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),      print("subdirectory and customize it to your needs.\n")
46  # Compilation options      options_file = None
47    BoolOption('dodebug', 'For backwards compatibility', 'no'),  
48    BoolOption('usedebug', 'Do you want a debug build?', 'no'),  ############################### Build options ################################
49    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),  
50    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),  default_prefix='/usr'
51    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
52    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),  lapack_flavours=('none', 'clapack', 'mkl')
53    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),  
54    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  vars = Variables(options_file, ARGUMENTS)
55    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  vars.AddVariables(
56    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
57    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
58    ('cc_extra', 'Extra C/C++ flags', ''),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
59    ('sys_libs', 'System libraries to link with', []),    BoolVariable('verbose', 'Output full compile/link lines', False),
60    ('ar_flags', 'Static library archiver flags to use', ''),  # Compiler/Linker options
61    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    ('cc', 'Path to C compiler', 'default'),
62    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
63  # Python    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
64    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
65    ('python_lib_path', 'Path to Python libs', usr_lib),    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
66    ('python_libs', 'Python libraries to link with', [python_version]),    ('cc_extra', 'Extra C compiler flags', ''),
67    ('python_cmd', 'Python command', 'python'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
68  # Boost    ('ld_extra', 'Extra linker flags', ''),
69    ('boost_path', 'Path to Boost includes', '/usr/include'),    BoolVariable('werror','Treat compiler warnings as errors', True),
70    ('boost_lib_path', 'Path to Boost libs', usr_lib),    BoolVariable('debug', 'Compile with debug flags', False),
71    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
72  # NetCDF    ('omp_flags', 'OpenMP compiler flags', 'default'),
73    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
74    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),  # Mandatory libraries
75    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
76    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
77  # MPI  # Mandatory for tests
78    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
79    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
80    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),  # Optional libraries and options
81    ('mpi_path', 'Path to MPI includes', '/usr/include'),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
82    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
83    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
84    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),    BoolVariable('netcdf', 'Enable netCDF file support', False),
85  # ParMETIS    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
86    BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
87    ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
88    ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
89    ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
90  # PAPI    BoolVariable('papi', 'Enable PAPI', False),
91    BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
92    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
93    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
94  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
95    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
96    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
97    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
98    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
99  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
100    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
101    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
102    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
103    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
104    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
105  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
106    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
107    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
108    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
109  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
110    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
111    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
112    ('blas_libs', 'BLAS libraries to link with', ['blas'])    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
113    # Advanced settings
114      #dudley_assemble_flags = -funroll-loops      to actually do something
115      ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
116      # To enable passing function pointers through python
117      BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
118      # An option for specifying the compiler tools (see windows branch)
119      ('tools_names', 'Compiler tools to use', ['default']),
120      ('env_export', 'Environment variables to be passed to tools',[]),
121      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
122      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123      # finer control over library building, intel aggressive global optimisation
124      # works with dynamic libraries on windows.
125      ('build_shared', 'Build dynamic libraries only', False),
126      ('sys_libs', 'Extra libraries to link with', []),
127      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
128      ('SVN_VERSION', 'Do not use from options file', -2),
129      ('pythoncmd', 'which python to compile with','python'),
130      ('usepython3', 'Is this a python3 build? (experimental)', False),
131      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
132      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
133      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
134      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
135  )  )
136    
137  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
138    
139  # intelc uses regular expressions improperly and emits a warning about  # Intel's compiler uses regular expressions improperly and emits a warning
140  # failing to find the compilers.  This warning can be safely ignored.  # about failing to find the compilers. This warning can be safely ignored.
141    
142  if IS_WINDOWS_PLATFORM:  # PATH is needed so the compiler, linker and tools are found if they are not
143        env = Environment(tools = ['default', 'msvc'], options = opts)  # in default locations.
144    env = Environment(tools = ['default'], options = vars,
145                      ENV = {'PATH': os.environ['PATH']})
146                      
147    
148    #set the vars for clang
149    def mkclang(env):
150      env['CC']='clang'
151      env['CXX']='clang++'
152                      
153                      
154    if env['tools_names'] != 'default':
155        zz=env['tools_names']
156        if 'clang' in zz:
157            zz.remove('clang')
158            zz.insert(0, mkclang)
159        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
160                          ENV = {'PATH' : os.environ['PATH']})
161    
162    if options_file:
163        opts_valid=False
164        if 'escript_opts_version' in env.Dictionary() and \
165            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
166                opts_valid=True
167        if opts_valid:
168            print("Using options in %s." % options_file)
169        else:
170            print("\nOptions file %s" % options_file)
171            print("is outdated! Please update the file by examining one of the TEMPLATE")
172            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
173            Exit(1)
174    
175    # Generate help text (scons -h)
176    Help(vars.GenerateHelpText(env))
177    
178    # Check for superfluous options
179    if len(vars.UnknownVariables())>0:
180        for k in vars.UnknownVariables():
181            print("Unknown option '%s'" % k)
182        Exit(1)
183    
184    #################### Make sure install directories exist #####################
185    
186    env['BUILD_DIR']=env['build_dir']
187    prefix=Dir(env['prefix']).abspath
188    env['incinstall'] = os.path.join(prefix, 'include')
189    env['bininstall'] = os.path.join(prefix, 'bin')
190    env['libinstall'] = os.path.join(prefix, 'lib')
191    env['pyinstall']  = os.path.join(prefix, 'esys')
192    if not os.path.isdir(env['bininstall']):
193        os.makedirs(env['bininstall'])
194    if not os.path.isdir(env['libinstall']):
195        os.makedirs(env['libinstall'])
196    if not os.path.isdir(env['pyinstall']):
197        os.makedirs(env['pyinstall'])
198    
199    env.Append(CPPPATH = [env['incinstall']])
200    env.Append(LIBPATH = [env['libinstall']])
201    
202    ################# Fill in compiler options if not set above ##################
203    
204    if env['cc'] != 'default': env['CC']=env['cc']
205    if env['cxx'] != 'default': env['CXX']=env['cxx']
206    
207    # version >=9 of intel C++ compiler requires use of icpc to link in C++
208    # runtimes (icc does not)
209    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
210        env['LINK'] = env['CXX']
211    
212    # default compiler/linker options
213    cc_flags = ''
214    cc_optim = ''
215    cc_debug = ''
216    omp_flags = ''
217    omp_ldflags = ''
218    fatalwarning = '' # switch to turn warnings into errors
219    sysheaderopt = '' # how to indicate that a header is a system header
220    
221    # env['CC'] might be a full path
222    cc_name=os.path.basename(env['CC'])
223    
224    if cc_name == 'icc':
225        # Intel compiler
226        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
227        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
228        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
229        omp_flags   = "-openmp -openmp_report0"
230        omp_ldflags = "-openmp -openmp_report0 -lpthread"
231        fatalwarning = "-Werror"
232    elif cc_name[:3] == 'gcc':
233        # GNU C on any system
234        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
235        cc_optim     = "-O3"
236        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
237        omp_flags    = "-fopenmp"
238        omp_ldflags  = "-fopenmp"
239        fatalwarning = "-Werror"
240        sysheaderopt = "-isystem"
241    elif cc_name == 'cl':
242        # Microsoft Visual C on Windows
243        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
244        cc_optim     = "/O2 /Op /W3"
245        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
246        fatalwarning = "/WX"
247    elif cc_name == 'icl':
248        # Intel C on Windows
249        cc_flags     = '/EHsc /GR /MD'
250        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
251        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
252        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
253        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
254    
255    # set defaults if not otherwise specified
256    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
257    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
258    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
259    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
260    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
261    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
262    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
263    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
264    
265    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
266    
267    if env['usepython3']:
268        env.Append(CPPDEFINES=['ESPYTHON3'])
269    
270    # set up the autolazy values
271    if env['forcelazy'] == 'on':
272        env.Append(CPPDEFINES=['FAUTOLAZYON'])
273    elif env['forcelazy'] == 'off':
274        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
275    
276    # set up the collective resolve values
277    if env['forcecollres'] == 'on':
278        env.Append(CPPDEFINES=['FRESCOLLECTON'])
279    elif env['forcecollres'] == 'off':
280        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
281    
282    # allow non-standard C if requested
283    if env['iknowwhatimdoing']:
284        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
285    
286    # Disable OpenMP if no flags provided
287    if env['openmp'] and env['omp_flags'] == '':
288       print("OpenMP requested but no flags provided - disabling OpenMP!")
289       env['openmp'] = False
290    
291    if env['openmp']:
292        env.Append(CCFLAGS = env['omp_flags'])
293        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
294    else:
295        env['omp_flags']=''
296        env['omp_ldflags']=''
297    
298    # add debug/non-debug compiler flags
299    if env['debug']:
300        env.Append(CCFLAGS = env['cc_debug'])
301    else:
302        env.Append(CCFLAGS = env['cc_optim'])
303    
304    # always add cc_flags
305    env.Append(CCFLAGS = env['cc_flags'])
306    
307    # add system libraries
308    env.AppendUnique(LIBS = env['sys_libs'])
309    
310    
311    global_revision=ARGUMENTS.get('SVN_VERSION', None)
312    if global_revision:
313        global_revision = re.sub(':.*', '', global_revision)
314        global_revision = re.sub('[^0-9]', '', global_revision)
315        if global_revision == '': global_revision='-2'
316  else:  else:
317     if socket.gethostname().split('.')[0] == 'service0':    # Get the global Subversion revision number for the getVersion() method
318        env = Environment(tools = ['default', 'intelc'], options = opts)    try:
319     elif os.uname()[4]=='ia64':      global_revision = os.popen('svnversion -n .').read()
320        env = Environment(tools = ['default', 'intelc'], options = opts)      global_revision = re.sub(':.*', '', global_revision)
321        if env['CXX'] == 'icpc':      global_revision = re.sub('[^0-9]', '', global_revision)
322           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)      if global_revision == '': global_revision='-2'
323     else:    except:
324        env = Environment(tools = ['default'], options = opts)      global_revision = '-1'
325  Help(opts.GenerateHelpText(env))  env['svn_revision']=global_revision
326    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
327  ############ Fill in compiler options if not set above #########  
328    if IS_WINDOWS:
329  # Backwards compatibility: allow dodebug=yes and useMPI=yes      if not env['build_shared']:
330  if env['dodebug']: env['usedebug'] = 1          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
331  if env['useMPI']: env['usempi'] = 1          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
332    
333  # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  ###################### Copy required environment vars ########################
334  # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
335    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
336  if env["CC"] == "icc":  if IS_WINDOWS:
337    # Intel compilers      LD_LIBRARY_PATH_KEY='PATH'
338    cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"      env['ENV']['LD_LIBRARY_PATH']=''
339    cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  else:
340    cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
341    omp_optim     = "-openmp -openmp_report0"  
342    omp_debug     = "-openmp -openmp_report0"  # the following env variables are exported for the unit tests
343    omp_libs      = ['guide', 'pthread']  
344    pedantic      = ""  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
345  elif env["CC"] == "gcc":      try:
346    # GNU C on any system          env['ENV'][key] = os.environ[key]
347    cc_flags      = "-fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER"      except KeyError:
348    cc_optim      = "-O3"          env['ENV'][key] = 1
349    cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
350    omp_optim     = ""  env_export=env['env_export']
351    omp_debug     = ""  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
352    omp_libs      = []  
353    pedantic      = "-pedantic-errors -Wno-long-long"  for key in set(env_export):
354  elif env["CC"] == "cl":      try:
355    # Microsoft Visual C on Windows          env['ENV'][key] = os.environ[key]
356    cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"      except KeyError:
357    cc_optim      = "/O2 /Op /MT /W3"          pass
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
   
 try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
 except KeyError: pass  
   
 try: env['ENV']['HOME'] = os.environ['HOME']  
 except KeyError: pass  
   
 # Configure for test suite  
 env.PrependENVPath('PYTHONPATH', prefix)  
 env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 ############ Set up paths for Configure() ######################  
   
 # Make a copy of an environment  
 # Use env.Clone if available, but fall back on env.Copy for older version of scons  
 def clone_env(env):  
   if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
   else:                   return env.Copy() # scons-0.96  
   
 # Add cc option -I<Escript>/trunk/include  
 env.Append(CPPPATH      = [Dir('include')])  
   
 # Add cc option -L<Escript>/trunk/lib  
 env.Append(LIBPATH      = [Dir(env['libinstall'])])  
   
 env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])  
   
 if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  
   
 if env['usepedantic']: env.Append(CCFLAGS = pedantic)  
   
 # MS Windows  
 if IS_WINDOWS_PLATFORM:  
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
358    
359  env.Append(ARFLAGS = env['ar_flags'])  try:
360        env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
361    except KeyError:
362        pass
363    
364    # these shouldn't be needed
365    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
366    #    try:
367    #        env['ENV'][key] = os.environ[key]
368    #    except KeyError:
369    #        pass
370    
 # Get the global Subversion revision number for getVersion() method  
371  try:  try:
372     global_revision = os.popen("svnversion -n .").read()      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
373     global_revision = re.sub(":.*", "", global_revision)  except KeyError:
374     global_revision = re.sub("[^0-9]", "", global_revision)      pass
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
375    
376  ############ numarray (required) ###############################  ######################## Add some custom builders ############################
377    
378  try:  if env['pythoncmd']=='python':
379    from numarray import identity      py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
380  except ImportError:  else:
381    print "Cannot import numarray, you need to set your PYTHONPATH"      py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
382    sys.exit(1)  env.Append(BUILDERS = {'PyCompile' : py_builder});
383    
384  ############ C compiler (required) #############################  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
385    env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
386    
387  # Create a Configure() environment for checking existence of required libraries and headers  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
388  conf = Configure(clone_env(env))  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
389    
390  # Test that the compiler is working  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
391  if not conf.CheckFunc('printf'):  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
   print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  
   sys.exit(1)  
392    
393  if not conf.CheckFunc('gethostname'):  ############################ Dependency checks ###############################
   env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
394    
395  ############ python libraries (required) #######################  # Create a Configure() environment to check for compilers and python
396    conf = Configure(env.Clone())
397    
398  conf.env.AppendUnique(CPPPATH       = [env['python_path']])  ######## Test that the compilers work
399  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  
400  conf.env.AppendUnique(LIBS      = [env['python_libs']])  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
401        if not conf.CheckCC():
402            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
403            Exit(1)
404        if not conf.CheckCXX():
405            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
406            Exit(1)
407    else:
408        if not conf.CheckFunc('printf', language='c'):
409            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
410            Exit(1)
411        if not conf.CheckFunc('printf', language='c++'):
412            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
413            Exit(1)
414    
415    if conf.CheckFunc('gethostname'):
416        conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
417    
418    ######## Python headers & library (required)
419    
420    #First we check to see if the config file has specified
421    ##Where to find the filae. Ideally, this should be automatic
422    #But we need to deal with the case where python is not in its INSTALL
423    #Directory
424    # Use the python scons is running
425    if env['pythoncmd']=='python':
426        python_inc_path=sysconfig.get_python_inc()
427        if IS_WINDOWS:
428            python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
429        elif env['PLATFORM']=='darwin':
430            python_lib_path=sysconfig.get_config_var('LIBPL')
431        else:
432            python_lib_path=sysconfig.get_config_var('LIBDIR')
433    
434        #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
435        if IS_WINDOWS:
436            python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
437        else:
438            python_libs=['python'+sysconfig.get_python_version()]
439    
440    #if we want to use a python other than the one scons is running
441    else:
442        initstring='from __future__ import print_function;from distutils import sysconfig;'
443        if env['pythonlibname']!='':
444            python_libs=env['pythonlibname']
445        else:   # work it out by calling python    
446            if IS_WINDOWS:
447                cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
448            else:
449                cmd='print("python"+sysconfig.get_python_version())'
450            p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
451            python_libs=p.stdout.readline()
452            if env['usepython3']:       # This is to convert unicode str into py2 string
453                python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought
454            p.wait()
455            python_libs=python_libs.strip()
456    
457      
458        # Now we know whether we are using python3 or not
459        p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
460        python_inc_path=p.stdout.readline()
461        if env['usepython3']:
462             python_inc_path=python_inc_path.encode()
463        p.wait()  
464        python_inc_path=python_inc_path.strip()
465        if IS_WINDOWS:
466            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
467        elif env['PLATFORM']=='darwin':
468            cmd="sysconfig.get_config_var(\"LIBPL\")"
469        else:
470            cmd="sysconfig.get_config_var(\"LIBDIR\")"
471    
472        p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
473        python_lib_path=p.stdout.readline()
474        if env['usepython3']:
475            python_lib_path=python_lib_path.decode()
476        p.wait()
477        python_lib_path=python_lib_path.strip()
478    
479    #Check for an override from the config file.
480    #Ideally, this should be automatic
481    #But we need to deal with the case where python is not in its INSTALL
482    #Directory
483    if env['pythonlibpath']!='':
484        python_lib_path=env['pythonlibpath']
485    
486    if env['pythonincpath']!='':
487        python_inc_path=env['pythonincpath']
488    
489    
490    if sysheaderopt == '':
491        conf.env.AppendUnique(CPPPATH = [python_inc_path])
492    else:
493        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
494    
495    conf.env.AppendUnique(LIBPATH = [python_lib_path])
496    conf.env.AppendUnique(LIBS = python_libs)
497    # The wrapper script needs to find the libs
498    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
499    
500  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
501    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
502    sys.exit(1)      Exit(1)
503  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
504    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
505    sys.exit(1)      Exit(1)
506    
507  ############ boost (required) ##################################  ## reuse conf to check for numpy header (optional)
508    if env['usepython3']:
509  conf.env.AppendUnique(CPPPATH       = [env['boost_path']])      # FIXME: This is until we can work out how to make the checks in python 3
510  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])      conf.env['numpy_h']=False
511  conf.env.AppendUnique(LIBS      = [env['boost_libs']])  else:
512        if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
513  if not conf.CheckCXXHeader('boost/python.hpp'):          conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
514    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])          conf.env['numpy_h']=True
515    sys.exit(1)      else:
516  if not conf.CheckFunc('PyObject_SetAttr'):          conf.env['numpy_h']=False
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
517    
518  # Commit changes to environment  # Commit changes to environment
519  env = conf.Finish()  env = conf.Finish()
520    
521  ############ VTK (optional) ####################################  ######## boost (required)
   
 if env['usevtk']:  
   try:  
     import vtk  
     env['usevtk'] = 1  
   except ImportError:  
     env['usevtk'] = 0  
   
 # Add VTK to environment env if it was found  
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
   
 ############ NetCDF (optional) #################################  
   
 conf = Configure(clone_env(env))  
   
 if env['usenetcdf']:  
   conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
   conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])  
   
 if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
   
 # Add NetCDF to environment env if it was found  
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
 else:  
   conf.Finish()  
   
 ############ PAPI (optional) ###################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usepapi']:  
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   
 if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
   
 # Add PAPI to environment env if it was found  
 if env['usepapi']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['BLOCKPAPI'])  
 else:  
   conf.Finish()  
   
 ############ MKL (optional) ####################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usemkl']:  
   conf.env.AppendUnique(CPPPATH = [env['mkl_path']])  
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   
 if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
522    
523  # Add MKL to environment env if it was found  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
524  if env['usemkl']:  if sysheaderopt == '':
525    env = conf.Finish()      env.AppendUnique(CPPPATH = [boost_inc_path])
526    env.Append(CPPDEFINES = ['MKL'])  else:
527  else:      # This is required because we can't -isystem /usr/include since it breaks
528    conf.Finish()      # std includes
529        if os.path.normpath(boost_inc_path) == '/usr/include':
530  ############ UMFPACK (optional) ################################          conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
531        else:
532  # Start a new configure environment that reflects what we've already found          env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
533  conf = Configure(clone_env(env))  
534    env.AppendUnique(LIBPATH = [boost_lib_path])
535    env.AppendUnique(LIBS = env['boost_libs'])
536    env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
537    
538    ######## numpy (required)
539    
540    if not detectModule(env, 'numpy'):
541        print("Cannot import numpy. If it is installed try setting your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
542        Exit(1)
543    
544  if env['useumfpack']:  ######## CppUnit (required for tests)
   conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
545    
546  if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  try:
547  if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
548        env.AppendUnique(CPPPATH = [cppunit_inc_path])
549  # Add UMFPACK to environment env if it was found      env.AppendUnique(LIBPATH = [cppunit_lib_path])
550  if env['useumfpack']:      env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
551    env = conf.Finish()      env['cppunit']=True
552    env.Append(CPPDEFINES = ['UMFPACK'])  except:
553  else:      env['cppunit']=False
   conf.Finish()  
554    
555  ############ Add the compiler flags ############################  ######## sympy (optional)
556    
557  # Enable debug by choosing either cc_debug or cc_optim  if detectModule(env, 'sympy'):
558  if env['usedebug']:      env['sympy'] = True
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
559  else:  else:
560    env.Append(CCFLAGS        = env['cc_optim'])      print("Cannot import sympy. Symbolic toolbox and nonlinear PDEs will not be available.")
561    env.Append(CCFLAGS        = env['omp_optim'])      env['sympy'] = False
562    
563  # Always use cc_flags  ######## netCDF (optional)
564  env.Append(CCFLAGS      = env['cc_flags'])  
565  env.Append(LIBS         = [env['omp_libs']])  netcdf_inc_path=''
566    netcdf_lib_path=''
567  ############ MPI (optional) ####################################  if env['netcdf']:
568        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
569  # Create a modified environment for MPI programs (identical to env if usempi=no)      env.AppendUnique(CPPPATH = [netcdf_inc_path])
570  env_mpi = clone_env(env)      env.AppendUnique(LIBPATH = [netcdf_lib_path])
571        env.AppendUnique(LIBS = env['netcdf_libs'])
572  # Start a new configure environment that reflects what we've already found      env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
573  conf = Configure(clone_env(env_mpi))      env.Append(CPPDEFINES = ['USE_NETCDF'])
574    
575  if env_mpi['usempi']:  ######## PAPI (optional)
576    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  
577    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  papi_inc_path=''
578    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  papi_lib_path=''
579    if env['papi']:
580        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
581        env.AppendUnique(CPPPATH = [papi_inc_path])
582        env.AppendUnique(LIBPATH = [papi_lib_path])
583        env.AppendUnique(LIBS = env['papi_libs'])
584        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
585        env.Append(CPPDEFINES = ['BLOCKPAPI'])
586    
587    ######## MKL (optional)
588    
589    mkl_inc_path=''
590    mkl_lib_path=''
591    if env['mkl']:
592        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
593        env.AppendUnique(CPPPATH = [mkl_inc_path])
594        env.AppendUnique(LIBPATH = [mkl_lib_path])
595        env.AppendUnique(LIBS = env['mkl_libs'])
596        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
597        env.Append(CPPDEFINES = ['MKL'])
598    
599    ######## UMFPACK (optional)
600    
601    umfpack_inc_path=''
602    umfpack_lib_path=''
603    if env['umfpack']:
604        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
605        env.AppendUnique(CPPPATH = [umfpack_inc_path])
606        env.AppendUnique(LIBPATH = [umfpack_lib_path])
607        env.AppendUnique(LIBS = env['umfpack_libs'])
608        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
609        env.Append(CPPDEFINES = ['UMFPACK'])
610    
611    ######## LAPACK (optional)
612    
613    if env['lapack']=='mkl' and not env['mkl']:
614        print("mkl_lapack requires MKL!")
615        Exit(1)
616    
617    env['uselapack'] = env['lapack']!='none'
618    lapack_inc_path=''
619    lapack_lib_path=''
620    if env['uselapack']:
621        header='clapack.h'
622        if env['lapack']=='mkl':
623            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
624            header='mkl_lapack.h'
625        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
626        env.AppendUnique(CPPPATH = [lapack_inc_path])
627        env.AppendUnique(LIBPATH = [lapack_lib_path])
628        env.AppendUnique(LIBS = env['lapack_libs'])
629        env.Append(CPPDEFINES = ['USE_LAPACK'])
630    
631    ######## Silo (optional)
632    
633    silo_inc_path=''
634    silo_lib_path=''
635    if env['silo']:
636        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
637        env.AppendUnique(CPPPATH = [silo_inc_path])
638        env.AppendUnique(LIBPATH = [silo_lib_path])
639        # Note that we do not add the libs since they are only needed for the
640        # weipa library and tools.
641        #env.AppendUnique(LIBS = [env['silo_libs']])
642    
643    ######## VSL random numbers (optional)
644    if env['vsl_random']:
645        env.Append(CPPDEFINES = ['MKLRANDOM'])
646    
647    ######## VisIt (optional)
648    
649    visit_inc_path=''
650    visit_lib_path=''
651    if env['visit']:
652        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
653        env.AppendUnique(CPPPATH = [visit_inc_path])
654        env.AppendUnique(LIBPATH = [visit_lib_path])
655    
656    ######## MPI (optional)
657    
658    if env['mpi']=='no':
659        env['mpi']='none'
660    
661    env['usempi'] = env['mpi']!='none'
662    mpi_inc_path=''
663    mpi_lib_path=''
664    if env['usempi']:
665        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
666        env.AppendUnique(CPPPATH = [mpi_inc_path])
667        env.AppendUnique(LIBPATH = [mpi_lib_path])
668        env.AppendUnique(LIBS = env['mpi_libs'])
669        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
670        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
671        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
672        # On the other hand MPT and OpenMPI don't define the latter so we have to
673        # do that here
674        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
675            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
676    
677    ######## BOOMERAMG (optional)
678    
679    if env['mpi'] == 'none': env['boomeramg'] = False
680    
681    boomeramg_inc_path=''
682    boomeramg_lib_path=''
683    if env['boomeramg']:
684        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
685        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
686        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
687        env.AppendUnique(LIBS = env['boomeramg_libs'])
688        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
689        env.Append(CPPDEFINES = ['BOOMERAMG'])
690    
691    ######## ParMETIS (optional)
692    
693    if not env['usempi']: env['parmetis'] = False
694    
695    parmetis_inc_path=''
696    parmetis_lib_path=''
697    if env['parmetis']:
698        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
699        env.AppendUnique(CPPPATH = [parmetis_inc_path])
700        env.AppendUnique(LIBPATH = [parmetis_lib_path])
701        env.AppendUnique(LIBS = env['parmetis_libs'])
702        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
703        env.Append(CPPDEFINES = ['USE_PARMETIS'])
704    
705  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  ######## gmsh (optional, for tests)
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
706    
707  # Add MPI to environment env_mpi if it was found  try:
708  if env_mpi['usempi']:      p=Popen(['gmsh', '-info'], stderr=PIPE)
709    env_mpi = conf.Finish()      _,e=p.communicate()
710    env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])      if e.split().count("MPI"):
711            env['gmsh']='m'
712        else:
713            env['gmsh']='s'
714    except OSError:
715        env['gmsh']=False
716    
717    ######## PDFLaTeX (for documentation)
718    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
719        env['pdflatex']=True
720  else:  else:
721    conf.Finish()      env['pdflatex']=False
   
 env['usempi'] = env_mpi['usempi']  
   
 ############ ParMETIS (optional) ###############################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
722    
723  if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  ######################## Summarize our environment ###########################
724    
725  if env_mpi['useparmetis']:  # keep some of our install paths first in the list for the unit tests
726    conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
727    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  env.PrependENVPath('PYTHONPATH', prefix)
728    conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  env['ENV']['ESCRIPT_ROOT'] = prefix
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
729    
730  # Add ParMETIS to environment env_mpi if it was found  if not env['verbose']:
731  if env_mpi['useparmetis']:      env['CCCOMSTR'] = "Compiling $TARGET"
732    env_mpi = conf.Finish()      env['CXXCOMSTR'] = "Compiling $TARGET"
733    env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])      env['SHCCCOMSTR'] = "Compiling $TARGET"
734        env['SHCXXCOMSTR'] = "Compiling $TARGET"
735        env['ARCOMSTR'] = "Linking $TARGET"
736        env['LINKCOMSTR'] = "Linking $TARGET"
737        env['SHLINKCOMSTR'] = "Linking $TARGET"
738        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
739        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
740        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
741        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
742        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
743    
744    print("")
745    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
746    print("Escript/Finley revision %s"%global_revision)
747    print("  Install prefix:  %s"%env['prefix'])
748    print("          Python:  %s"%sysconfig.PREFIX)
749    print("           boost:  %s"%env['boost_prefix'])
750    print("           numpy:  YES")
751    if env['usempi']:
752        print("             MPI:  YES (flavour: %s)"%env['mpi'])
753  else:  else:
754    conf.Finish()      print("             MPI:  DISABLED")
755    if env['uselapack']:
756  env['useparmetis'] = env_mpi['useparmetis']      print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
757    else:
758  ############ Summarize our environment #########################      print("          LAPACK:  DISABLED")
759    d_list=[]
760  print ""  e_list=[]
761  print "Summary of configuration (see ./config.log for information)"  for i in 'debug','openmp','boomeramg','mkl','netcdf','papi','parmetis','silo','sympy','umfpack','visit','vsl_random':
762  print " Using python libraries"      if env[i]: e_list.append(i)
763  print " Using numarray"      else: d_list.append(i)
764  print " Using boost"  for i in e_list:
765  if env['usenetcdf']: print "    Using NetCDF"      print("%16s:  YES"%i)
766  else: print "   Not using NetCDF"  for i in d_list:
767  if env['usevtk']: print "   Using VTK"      print("%16s:  DISABLED"%i)
768  else: print "   Not using VTK"  if env['cppunit']:
769  if env['usemkl']: print "   Using MKL"      print("         CppUnit:  FOUND")
770  else: print "   Not using MKL"  else:
771  if env['useumfpack']: print "   Using UMFPACK"      print("         CppUnit:  NOT FOUND")
772  else: print "   Not using UMFPACK"  if env['gmsh']=='m':
773  if env['useopenmp']: print "    Using OpenMP"      print("            gmsh:  FOUND, MPI-ENABLED")
774  else: print "   Not using OpenMP"  elif env['gmsh']=='s':
775  if env['usempi']: print "   Using MPI"      print("            gmsh:  FOUND")
776  else: print "   Not using MPI"  else:
777  if env['useparmetis']: print "  Using ParMETIS"      print("            gmsh:  NOT FOUND")
778  else: print "   Not using ParMETIS (requires MPI)"  if env['numpy_h']:
779  if env['usepapi']: print "  Using PAPI"      print("   numpy headers:  FOUND")
780  else: print "   Not using PAPI"  else:
781  if env['usedebug']: print " Compiling for debug"      print("   numpy headers:  NOT FOUND")
782  else: print "   Not compiling for debug"  print("   vsl_random:  %s"%env['vsl_random'])
783  print " Installing in", prefix      
784  print ""  if ((fatalwarning != '') and (env['werror'])):
785        print("  Treating warnings as errors")
786  ############ Add some custom builders ##########################  else:
787        print("  NOT treating warnings as errors")
788  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  print("")
789  env.Append(BUILDERS = {'PyCompile' : py_builder});  
790    ####################### Configure the subdirectories #########################
791  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  
792  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  from grouptest import *
793    
794  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  TestGroups=[]
795  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
796    # keep an environment without warnings-as-errors
797  ############ Build the desired subdirectories ##################  dodgy_env=env.Clone()
798    
799  Export(["env", "env_mpi", "clone_env"])  # now add warnings-as-errors flags. This needs to be done after configuration
800    # because the scons test files have warnings in them
801  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  if ((fatalwarning != '') and (env['werror'])):
802  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)      env.Append(CCFLAGS = fatalwarning)
803  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
804  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  Export(
805  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)    ['env',
806  env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)     'dodgy_env',
807  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)     'IS_WINDOWS',
808  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)     'TestGroups'
809  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)    ]
810  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  )
811    
812  ############ Remember what optimizations we used ###############  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
813    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
814    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
815    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
816    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
817    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
818    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
819    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
820    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
821    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
822    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
823    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
824    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
825    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
826    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
827    
828    
829    ######################## Populate the buildvars file #########################
830    
831    # remove obsolete file
832    if not env['usempi']:
833        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
834        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
835    
836    # Try to extract the boost version from version.hpp
837    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
838    boostversion='unknown'
839    try:
840        for line in boosthpp:
841            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
842            if ver:
843                boostversion=ver.group(1)
844    except StopIteration:
845        pass
846    boosthpp.close()
847    
848    
849    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
850    buildvars.write("svn_revision="+str(global_revision)+"\n")
851    buildvars.write("prefix="+prefix+"\n")
852    buildvars.write("cc="+env['CC']+"\n")
853    buildvars.write("cxx="+env['CXX']+"\n")
854    if env['pythoncmd']=='python':
855        buildvars.write("python="+sys.executable+"\n")
856        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
857    else:
858        buildvars.write("python="+env['pythoncmd']+"\n")
859        p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)
860        verstring=p.stdout.readline().strip()
861        p.wait()
862        buildvars.write("python_version="+verstring+"\n")
863    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
864    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
865    buildvars.write("boost_version="+boostversion+"\n")
866    buildvars.write("debug=%d\n"%int(env['debug']))
867    buildvars.write("openmp=%d\n"%int(env['openmp']))
868    buildvars.write("mpi=%s\n"%env['mpi'])
869    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
870    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
871    buildvars.write("lapack=%s\n"%env['lapack'])
872    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
873    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
874        buildvars.write("%s=%d\n"%(i, int(env[i])))
875        if env[i]:
876            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
877            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
878    buildvars.close()
879    
880  remember_list = []  ################### Targets to build and install libraries ###################
881    
882  if env['usedebug']:  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
883    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  env.Alias('target_init', [target_init])
884  else:  # delete buildvars upon cleanup
885    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Delete('$TARGET'))  env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
886    
887  if env['usempi']:  # The headers have to be installed prior to build in order to satisfy
888    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  # #include <paso/Common.h>
889  else:  env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
890    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Delete('$TARGET'))  env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
891    
892  if env['omp_optim'] != '':  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
893    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
 else:  
   remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Delete('$TARGET'))  
894    
895  env.Alias('remember_options', remember_list)  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
896    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
897    
898  ############ Targets to build and install libraries ############  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
899    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
900    
901  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
902  env.Alias('target_init', [target_init])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
903    
904  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
905  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
906    
907  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
908  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
909    
910  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
911  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
912    
913  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
914  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
915    
916  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
917  build_all_list = []  build_all_list = []
918  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
919  build_all_list += ['build_paso']  build_all_list += ['build_paso']
920  build_all_list += ['build_escript']  build_all_list += ['build_escript']
921    build_all_list += ['build_pasowrap']
922    build_all_list += ['build_dudley']
923  build_all_list += ['build_finley']  build_all_list += ['build_finley']
924  if env['usempi']: build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
925    build_all_list += ['build_weipa']
926    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
927    if env['usempi']:   build_all_list += ['build_pythonMPI']
928    build_all_list += ['build_escriptconvert']
929  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
930    
931  install_all_list = []  install_all_list = []
# Line 580  install_all_list += ['target_init'] Line 933  install_all_list += ['target_init']
933  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
934  install_all_list += ['install_paso']  install_all_list += ['install_paso']
935  install_all_list += ['install_escript']  install_all_list += ['install_escript']
936    install_all_list += ['install_pasowrap']
937    install_all_list += ['install_dudley']
938  install_all_list += ['install_finley']  install_all_list += ['install_finley']
939  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
940  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
941  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
942  if env['usempi']: install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_downunder_py']
943  install_all_list += ['remember_options']  install_all_list += ['install_modellib_py']
944    install_all_list += ['install_pycad_py']
945    if env['usempi']:   install_all_list += ['install_pythonMPI']
946    install_all_list += ['install_escriptconvert']
947  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
948    
949  # Default target is install  # Default target is install
950  env.Default('install_all')  env.Default('install_all')
951    
952  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
953    
954  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  if not env['cppunit']:
955        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
956        env.Alias('run_tests', test_msg)
957    env.Alias('run_tests', ['install_all'])
958    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
959    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
960    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
961    
962    ##################### Targets to build the documentation #####################
963    
964    env.Alias('api_epydoc','install_all')
965    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
966    env.Alias('release_prep', ['docs', 'install_all'])
967    
968    if not IS_WINDOWS:
969        try:
970            utest=open('utest.sh','w')
971            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix))
972            for tests in TestGroups:
973                utest.write(tests.makeString())
974            utest.close()
975            Execute(Chmod('utest.sh', 0o755))
976            print("Generated utest.sh.")
977        except IOError:
978            print("Error attempting to write unittests file.")
979            Exit(1)
980    
981        # delete utest.sh upon cleanup
982        env.Clean('target_init', 'utest.sh')
983    
984        # Make sure that the escript wrapper is in place
985        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
986            print("Copying escript wrapper.")
987            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
988    

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