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Revision 5147 - (view) (annotate) - [select for diffs]
Modified Fri Sep 12 00:33:02 2014 UTC (4 years, 8 months ago) by caltinay
File length: 11143 byte(s)
Diff to previous 5136
merge to latest trunk.


Revision 5136 - (view) (annotate) - [select for diffs]
Modified Tue Sep 9 07:13:55 2014 UTC (4 years, 8 months ago) by caltinay
File length: 11134 byte(s)
Diff to previous 5122
ripley now supports paso solvers again and returns an appropriate matrix type
id. Changed the getSystemMatrixTypeId() method to take a full SolverBuddy
instance and made some other simplifications.


Revision 5122 - (view) (annotate) - [select for diffs]
Modified Thu Aug 21 04:32:39 2014 UTC (4 years, 8 months ago) by caltinay
File length: 11136 byte(s)
Diff to previous 4949
Fast-forward to latest trunk to be able to use both Paso or cusp.


Revision 4949 - (view) (annotate) - [select for diffs]
Modified Mon May 19 05:54:58 2014 UTC (5 years ago) by caltinay
File length: 10559 byte(s)
Diff to previous 4941
Fast forward to current trunk rev 4947.
All tests that don't require a direct solver pass without MPI.


Revision 4941 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:49:48 2014 UTC (5 years ago) by caltinay
File length: 10537 byte(s)
Diff to previous 4940
first proof of concept - self-contained ripley system matrix with diagonal
storage, CG solver, no preconditioner, no MPI, no blocks, quite a few
quick'n'dirty hacks.
Solves poisson faster than paso :-)



Revision 4940 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:40:06 2014 UTC (5 years ago) by caltinay
File length: 10971 byte(s)
Diff to previous 4934
A branch to have fun with diagonal storage for ripley.


Revision 4934 - (view) (annotate) - [select for diffs]
Modified Tue May 13 00:28:11 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 10971 byte(s)
Diff to previous 4836
This commit is brought to you by the number 4934 and the tool "meld".
Merge of partially complete split world code from branch.




Revision 4836 - (view) (annotate) - [select for diffs]
Modified Mon Apr 7 05:51:55 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10912 byte(s)
Diff to previous 4818
"Some" SystemMatrix clean up.....


Revision 4818 - (view) (annotate) - [select for diffs]
Modified Mon Mar 31 00:16:20 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10908 byte(s)
Diff to previous 4817
SystemMatrixPattern shptr


Revision 4817 - (view) (annotate) - [select for diffs]
Modified Fri Mar 28 08:04:09 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10895 byte(s)
Diff to previous 4801
Coupler/Connector shared ptrs.


Revision 4801 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 03:26:58 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10907 byte(s)
Diff to previous 4800
paso::Coupler and paso::Connector.


Revision 4800 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 01:50:04 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10889 byte(s)
Diff to previous 4738
paso::SystemMatrixPattern


Revision 4738 - (view) (annotate) - [select for diffs]
Modified Wed Mar 12 01:32:36 2014 UTC (5 years, 2 months ago) by sshaw
Original Path: trunk/ripley/src/Brick.h
File length: 10886 byte(s)
Diff to previous 4712
adding support for reading binary grids from gzip compressed binary files, ripley brick only so far

Revision 4712 - (view) (annotate) - [select for diffs]
Modified Wed Feb 26 04:08:41 2014 UTC (5 years, 2 months ago) by sshaw
Original Path: trunk/ripley/src/Brick.h
File length: 10522 byte(s)
Diff to previous 4687
adding skeleton of fast Lame assemblers
adjusted automatic ripley domain subdivision ( should solve issue #94 )
more tab->space conversions


Revision 4687 - (view) (annotate) - [select for diffs]
Modified Wed Feb 19 00:03:29 2014 UTC (5 years, 3 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 10488 byte(s)
Diff to previous 4657
Remove randomFill python method from ripley domains.
All random data objects (for all domain types) should be generated 
using esys.escript.RandomData()

The only filtered random we have is gaussian on ripley but
it is triggered by passing the tuple as the last arg of RandomData().

While the interface is a bit more complicated (in that you always need
 to pass in shape and functionspace) it does mean we have a 
common interface for all domains. 

Removed randomFill from DataExpanded.
The reasoning behind this is to force domains to call the util function
themselves and enforce whatever consistancy requirements they have.

Added version of blocktools to deal with 2D case in Ripley.
Use blocktools for the 2D transfers [This was cleaner than modifying the
previous implementation to deal with variable shaped points].

Note that under MPI, ripley can not generate random data (even unfiltered)
if any of its per rank dimensions is <4 elements on any side.

Unit tests for these calls are in but some extra checks still needed.




Revision 4657 - (view) (annotate) - [select for diffs]
Modified Thu Feb 6 06:12:20 2014 UTC (5 years, 3 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 10245 byte(s)
Diff to previous 4650
I changed some files.
Updated copyright notices, added GeoComp.




Revision 4650 - (view) (annotate) - [select for diffs]
Modified Wed Feb 5 04:16:01 2014 UTC (5 years, 3 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 10177 byte(s)
Diff to previous 4638
Fixed a spelling error and missing virtual (not sure that one matters).
Added _untested_ 3D gaussian smoothed random data



Revision 4638 - (view) (annotate) - [select for diffs]
Modified Thu Jan 30 06:25:10 2014 UTC (5 years, 3 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 9962 byte(s)
Diff to previous 4629
Fixes necessary to get a clang/macports build working on 10.9

Revision 4629 - (view) (annotate) - [select for diffs]
Modified Fri Jan 24 03:29:25 2014 UTC (5 years, 3 months ago) by sshaw
Original Path: trunk/ripley/src/Brick.h
File length: 10045 byte(s)
Diff to previous 4626
added dirac point interpolation to ripley (and fixed dirac points in Brick)
added fast wave assembler for Brick and minor correction to fast wave assembler for Rectangle


Revision 4626 - (view) (annotate) - [select for diffs]
Modified Wed Jan 22 06:07:34 2014 UTC (5 years, 3 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 9914 byte(s)
Diff to previous 4622
Eliminated all const_cast<Data*> hacks in ripley and finley now that
Data.getSampleDataRO returns a const pointer.


Revision 4622 - (view) (annotate) - [select for diffs]
Modified Fri Jan 17 04:55:41 2014 UTC (5 years, 4 months ago) by sshaw
Original Path: trunk/ripley/src/Brick.h
File length: 9836 byte(s)
Diff to previous 4618
Added dirac support to ripley, added interface for custom assemblers for ripleydomains (also added the custom assembler for 2D VTI waves), changed synthetic_VTI example to use the new, faster custom assembler


Revision 4618 - (view) (annotate) - [select for diffs]
Modified Wed Jan 15 04:35:19 2014 UTC (5 years, 4 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 11125 byte(s)
Diff to previous 4615
Implemented reverse reading of grid data from netcdf files.
Fixes #44.


Revision 4615 - (view) (annotate) - [select for diffs]
Modified Mon Jan 13 05:05:33 2014 UTC (5 years, 4 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 11119 byte(s)
Diff to previous 4495
Step 1 for #31: wrap parameters in an object.


Revision 4495 - (view) (annotate) - [select for diffs]
Modified Fri Jul 5 02:19:47 2013 UTC (5 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 11583 byte(s)
Diff to previous 4357
Added support for more input data types in ER Mapper files.
Tests will follow soon.


Revision 4357 - (view) (annotate) - [select for diffs]
Modified Thu Apr 11 06:07:14 2013 UTC (6 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 11182 byte(s)
Diff to previous 4340
templated writeBinaryGrid and a bit of cleanup.


Revision 4340 - (view) (annotate) - [select for diffs]
Modified Fri Mar 22 04:38:36 2013 UTC (6 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10968 byte(s)
Diff to previous 4334
added ripley method that returns grid parameters as python tuple.


Revision 4334 - (view) (annotate) - [select for diffs]
Modified Thu Mar 21 06:00:14 2013 UTC (6 years, 2 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 10519 byte(s)
Diff to previous 4277
Preparations for Voxet (GOCAD) binary grid output + code clean up.
Changed node id's order to remove code duplication in weipa.
More work to do...


Revision 4277 - (view) (annotate) - [select for diffs]
Modified Wed Mar 6 01:30:41 2013 UTC (6 years, 2 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 9209 byte(s)
Diff to previous 4154
Implemented claimed support for mixing data with different resolutions.


Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (6 years, 3 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 9093 byte(s)
Diff to previous 4013
Round 1 of copyright fixes

Revision 4013 - (view) (annotate) - [select for diffs]
Modified Thu Oct 4 03:13:27 2012 UTC (6 years, 7 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 9093 byte(s)
Diff to previous 3981
Implemented netCDF grid reader analogous to binary grid reader in ripley.


Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (6 years, 7 months ago) by jfenwick
Original Path: trunk/ripley/src/Brick.h
File length: 8889 byte(s)
Diff to previous 3971
First pass of updating copyright notices

Revision 3971 - (view) (annotate) - [select for diffs]
Modified Wed Sep 19 02:55:35 2012 UTC (6 years, 8 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 8770 byte(s)
Diff to previous 3943
Implemented binary grid reader in ripley which is now used in ER Mapper source.
Interface/details likely to change but need to get this running now.


Revision 3943 - (view) (annotate) - [select for diffs]
Modified Thu Aug 9 04:43:24 2012 UTC (6 years, 9 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 8543 byte(s)
Diff to previous 3915
Added heuristics for number of domain subdivisions to ripley so ripley domains
can now be created without specifying the values manually (but a warning will
be printed).


Revision 3915 - (view) (annotate) - [select for diffs]
Modified Mon Jun 25 02:17:58 2012 UTC (6 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 8534 byte(s)
Diff to previous 3792
Added declspecs for all ripley classes.


Revision 3792 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 06:16:25 2012 UTC (7 years, 3 months ago) by caltinay
Original Path: trunk/ripley/src/Brick.h
File length: 8842 byte(s)
Copied from: branches/ripleygmg_from_3668/ripley/src/Brick.h revision 3791
Diff to previous 3781
Merged ripley rectangular domain into trunk.


Revision 3781 - (view) (annotate) - [select for diffs]
Modified Mon Jan 23 22:18:49 2012 UTC (7 years, 3 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 8842 byte(s)
Diff to previous 3777
Since setX() is not supported the constructors now take location and extent.
Python wrapper allows construction the old way with l0,l1 or with
tuples (x0,x1),(y0,y1).


Revision 3777 - (view) (annotate) - [select for diffs]
Modified Thu Jan 19 06:17:38 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 8728 byte(s)
Diff to previous 3769
3D tests pass, yeah :-)


Revision 3769 - (view) (annotate) - [select for diffs]
Modified Tue Jan 17 04:09:55 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 8496 byte(s)
Diff to previous 3766
Preparations for PDE boundary element assembly.
Removed some code that slipped in before.


Revision 3766 - (view) (annotate) - [select for diffs]
Modified Thu Jan 12 08:17:49 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 8058 byte(s)
Diff to previous 3764
Checkpoint. Getting weipa to like ripley again.


Revision 3764 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 06:31:15 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 7883 byte(s)
Diff to previous 3762
Fixed integration now that elements overlap + code cleanup.


Revision 3762 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 00:01:45 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 8177 byte(s)
Diff to previous 3761
PDE assemblage with reduced order done.


Revision 3761 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 06:50:33 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 7511 byte(s)
Diff to previous 3760
Can solve full order systems of PDEs in 2D and 3D now.


Revision 3760 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 05:21:18 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 7185 byte(s)
Diff to previous 3757
-implemented addPDEToRHS() and setToSize()
-added a few missing calls to requireWrite()
-added assemblePDESystem() to Rectangle but haven't tested yet


Revision 3757 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 04:48:27 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6931 byte(s)
Diff to previous 3756
Implemented ownSample() for DOF and Elements.


Revision 3756 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 02:35:19 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6932 byte(s)
Diff to previous 3755
Fixed interpolation from DOF to nodes and moved common code to the base class.


Revision 3755 - (view) (annotate) - [select for diffs]
Modified Thu Jan 5 06:51:31 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6868 byte(s)
Diff to previous 3754
Made element IDs globally unique so ownSample can work (to be implemented).
Fixed couple block in 3D so PDEs seem to work now with MPI :-)


Revision 3754 - (view) (annotate) - [select for diffs]
Modified Wed Jan 4 07:07:37 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6794 byte(s)
Diff to previous 3753
checkpoint. 3D single PDEs almost working


Revision 3753 - (view) (annotate) - [select for diffs]
Modified Tue Jan 3 09:01:49 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6102 byte(s)
Diff to previous 3750
Took over Node->DOF interpolation to Brick and parallelised some loops.


Revision 3750 - (view) (annotate) - [select for diffs]
Modified Fri Dec 23 01:20:34 2011 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6003 byte(s)
Diff to previous 3746
Checkpoint - reinstated DOF FS and tried to fix couple blocks...


Revision 3746 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 00:02:22 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5966 byte(s)
Diff to previous 3744
In Ripley Solution==ContinuousFunction and ReducedSolution==ReducedCF now.
Removed a test in escript that relied on failure when trying to tag Data on
Solution/ReducedSolution.


Revision 3744 - (view) (annotate) - [select for diffs]
Modified Tue Dec 13 06:41:54 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 6003 byte(s)
Diff to previous 3722
Implemented (Face)Elements->Reduced(Face)Elements interpolation and started
separating DOF and nodes.
Also, implemented operator==() so that a==b for different domain objects a and
b which are in the same state.


Revision 3722 - (view) (annotate) - [select for diffs]
Modified Wed Dec 7 05:53:22 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5966 byte(s)
Diff to previous 3713
All "util on ripley" tests pass now :-)
-added support for node/element/face tags
-implemented setToNormal()
-added a bunch of omp nowait


Revision 3713 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 04:43:29 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5688 byte(s)
Diff to previous 3711
Integrals in 2D and 3D for rectangle & brick elements & face elements in
regular and reduced orders.


Revision 3711 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 00:24:43 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5422 byte(s)
Diff to previous 3704
Interpolation & Gradient for reduced elements & faces.


Revision 3704 - (view) (annotate) - [select for diffs]
Modified Mon Dec 5 01:59:08 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5314 byte(s)
Diff to previous 3703
Interpolation on faces.


Revision 3703 - (view) (annotate) - [select for diffs]
Modified Sun Dec 4 23:42:52 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 5107 byte(s)
Diff to previous 3702
Gradient and interpolation on elements for Brick domain.


Revision 3702 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 06:12:32 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 4607 byte(s)
Diff to previous 3698
Gradient for Rectangle elements.


Revision 3698 - (view) (annotate) - [select for diffs]
Modified Tue Nov 29 00:47:29 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 4872 byte(s)
Diff to previous 3691
[x] Rectangle...
[x] Brick node id's and weipa compatibility



Revision 3691 - (view) (annotate) - [select for diffs]
Added Wed Nov 23 23:07:37 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Brick.h
File length: 3820 byte(s)
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