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Revision 5136 - (view) (annotate) - [select for diffs]
Modified Tue Sep 9 07:13:55 2014 UTC (4 years, 5 months ago) by caltinay
File length: 11109 byte(s)
Diff to previous 5122
ripley now supports paso solvers again and returns an appropriate matrix type
id. Changed the getSystemMatrixTypeId() method to take a full SolverBuddy
instance and made some other simplifications.


Revision 5122 - (view) (annotate) - [select for diffs]
Modified Thu Aug 21 04:32:39 2014 UTC (4 years, 6 months ago) by caltinay
File length: 11111 byte(s)
Diff to previous 4949
Fast-forward to latest trunk to be able to use both Paso or cusp.


Revision 4949 - (view) (annotate) - [select for diffs]
Modified Mon May 19 05:54:58 2014 UTC (4 years, 9 months ago) by caltinay
File length: 10592 byte(s)
Diff to previous 4941
Fast forward to current trunk rev 4947.
All tests that don't require a direct solver pass without MPI.


Revision 4941 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:49:48 2014 UTC (4 years, 9 months ago) by caltinay
File length: 10557 byte(s)
Diff to previous 4940
first proof of concept - self-contained ripley system matrix with diagonal
storage, CG solver, no preconditioner, no MPI, no blocks, quite a few
quick'n'dirty hacks.
Solves poisson faster than paso :-)



Revision 4940 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:40:06 2014 UTC (4 years, 9 months ago) by caltinay
File length: 10998 byte(s)
Diff to previous 4934
A branch to have fun with diagonal storage for ripley.


Revision 4934 - (view) (annotate) - [select for diffs]
Modified Tue May 13 00:28:11 2014 UTC (4 years, 9 months ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 10998 byte(s)
Diff to previous 4836
This commit is brought to you by the number 4934 and the tool "meld".
Merge of partially complete split world code from branch.




Revision 4836 - (view) (annotate) - [select for diffs]
Modified Mon Apr 7 05:51:55 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10928 byte(s)
Diff to previous 4818
"Some" SystemMatrix clean up.....


Revision 4818 - (view) (annotate) - [select for diffs]
Modified Mon Mar 31 00:16:20 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10924 byte(s)
Diff to previous 4817
SystemMatrixPattern shptr


Revision 4817 - (view) (annotate) - [select for diffs]
Modified Fri Mar 28 08:04:09 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10907 byte(s)
Diff to previous 4801
Coupler/Connector shared ptrs.


Revision 4801 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 03:26:58 2014 UTC (4 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10920 byte(s)
Diff to previous 4800
paso::Coupler and paso::Connector.


Revision 4800 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 01:50:04 2014 UTC (4 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10901 byte(s)
Diff to previous 4765
paso::SystemMatrixPattern


Revision 4765 - (view) (annotate) - [select for diffs]
Modified Wed Mar 19 00:17:16 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/Rectangle.h
File length: 10898 byte(s)
Diff to previous 4738
added ripley rectangle reading from compressed files, added unit tests for binaryGrid reads and writes (only single ranks for compressed thus far) (#104)

Revision 4738 - (view) (annotate) - [select for diffs]
Modified Wed Mar 12 01:32:36 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/Rectangle.h
File length: 10830 byte(s)
Diff to previous 4712
adding support for reading binary grids from gzip compressed binary files, ripley brick only so far

Revision 4712 - (view) (annotate) - [select for diffs]
Modified Wed Feb 26 04:08:41 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/Rectangle.h
File length: 10533 byte(s)
Diff to previous 4687
adding skeleton of fast Lame assemblers
adjusted automatic ripley domain subdivision ( should solve issue #94 )
more tab->space conversions


Revision 4687 - (view) (annotate) - [select for diffs]
Modified Wed Feb 19 00:03:29 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 10499 byte(s)
Diff to previous 4657
Remove randomFill python method from ripley domains.
All random data objects (for all domain types) should be generated 
using esys.escript.RandomData()

The only filtered random we have is gaussian on ripley but
it is triggered by passing the tuple as the last arg of RandomData().

While the interface is a bit more complicated (in that you always need
 to pass in shape and functionspace) it does mean we have a 
common interface for all domains. 

Removed randomFill from DataExpanded.
The reasoning behind this is to force domains to call the util function
themselves and enforce whatever consistancy requirements they have.

Added version of blocktools to deal with 2D case in Ripley.
Use blocktools for the 2D transfers [This was cleaner than modifying the
previous implementation to deal with variable shaped points].

Note that under MPI, ripley can not generate random data (even unfiltered)
if any of its per rank dimensions is <4 elements on any side.

Unit tests for these calls are in but some extra checks still needed.




Revision 4657 - (view) (annotate) - [select for diffs]
Modified Thu Feb 6 06:12:20 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 10240 byte(s)
Diff to previous 4650
I changed some files.
Updated copyright notices, added GeoComp.




Revision 4650 - (view) (annotate) - [select for diffs]
Modified Wed Feb 5 04:16:01 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 10172 byte(s)
Diff to previous 4638
Fixed a spelling error and missing virtual (not sure that one matters).
Added _untested_ 3D gaussian smoothed random data



Revision 4638 - (view) (annotate) - [select for diffs]
Modified Thu Jan 30 06:25:10 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 10164 byte(s)
Diff to previous 4626
Fixes necessary to get a clang/macports build working on 10.9

Revision 4626 - (view) (annotate) - [select for diffs]
Modified Wed Jan 22 06:07:34 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10247 byte(s)
Diff to previous 4622
Eliminated all const_cast<Data*> hacks in ripley and finley now that
Data.getSampleDataRO returns a const pointer.


Revision 4622 - (view) (annotate) - [select for diffs]
Modified Fri Jan 17 04:55:41 2014 UTC (5 years, 1 month ago) by sshaw
Original Path: trunk/ripley/src/Rectangle.h
File length: 10100 byte(s)
Diff to previous 4618
Added dirac support to ripley, added interface for custom assemblers for ripleydomains (also added the custom assembler for 2D VTI waves), changed synthetic_VTI example to use the new, faster custom assembler


Revision 4618 - (view) (annotate) - [select for diffs]
Modified Wed Jan 15 04:35:19 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 11162 byte(s)
Diff to previous 4615
Implemented reverse reading of grid data from netcdf files.
Fixes #44.


Revision 4615 - (view) (annotate) - [select for diffs]
Modified Mon Jan 13 05:05:33 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 11156 byte(s)
Diff to previous 4521
Step 1 for #31: wrap parameters in an object.


Revision 4521 - (view) (annotate) - [select for diffs]
Modified Mon Aug 26 11:51:30 2013 UTC (5 years, 5 months ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 11620 byte(s)
Diff to previous 4495
Remove bool_t
Part of random.



Revision 4495 - (view) (annotate) - [select for diffs]
Modified Fri Jul 5 02:19:47 2013 UTC (5 years, 7 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 11418 byte(s)
Diff to previous 4357
Added support for more input data types in ER Mapper files.
Tests will follow soon.


Revision 4357 - (view) (annotate) - [select for diffs]
Modified Thu Apr 11 06:07:14 2013 UTC (5 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 11017 byte(s)
Diff to previous 4340
templated writeBinaryGrid and a bit of cleanup.


Revision 4340 - (view) (annotate) - [select for diffs]
Modified Fri Mar 22 04:38:36 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10803 byte(s)
Diff to previous 4334
added ripley method that returns grid parameters as python tuple.


Revision 4334 - (view) (annotate) - [select for diffs]
Modified Thu Mar 21 06:00:14 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 10382 byte(s)
Diff to previous 4277
Preparations for Voxet (GOCAD) binary grid output + code clean up.
Changed node id's order to remove code duplication in weipa.
More work to do...


Revision 4277 - (view) (annotate) - [select for diffs]
Modified Wed Mar 6 01:30:41 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 9081 byte(s)
Diff to previous 4154
Implemented claimed support for mixing data with different resolutions.


Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (6 years, 1 month ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 8965 byte(s)
Diff to previous 4013
Round 1 of copyright fixes

Revision 4013 - (view) (annotate) - [select for diffs]
Modified Thu Oct 4 03:13:27 2012 UTC (6 years, 4 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 8965 byte(s)
Diff to previous 3981
Implemented netCDF grid reader analogous to binary grid reader in ripley.


Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (6 years, 5 months ago) by jfenwick
Original Path: trunk/ripley/src/Rectangle.h
File length: 8761 byte(s)
Diff to previous 3971
First pass of updating copyright notices

Revision 3971 - (view) (annotate) - [select for diffs]
Modified Wed Sep 19 02:55:35 2012 UTC (6 years, 5 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 8642 byte(s)
Diff to previous 3943
Implemented binary grid reader in ripley which is now used in ER Mapper source.
Interface/details likely to change but need to get this running now.


Revision 3943 - (view) (annotate) - [select for diffs]
Modified Thu Aug 9 04:43:24 2012 UTC (6 years, 6 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 8415 byte(s)
Diff to previous 3915
Added heuristics for number of domain subdivisions to ripley so ripley domains
can now be created without specifying the values manually (but a warning will
be printed).


Revision 3915 - (view) (annotate) - [select for diffs]
Modified Mon Jun 25 02:17:58 2012 UTC (6 years, 8 months ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 8395 byte(s)
Diff to previous 3792
Added declspecs for all ripley classes.


Revision 3792 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 06:16:25 2012 UTC (7 years ago) by caltinay
Original Path: trunk/ripley/src/Rectangle.h
File length: 8703 byte(s)
Copied from: branches/ripleygmg_from_3668/ripley/src/Rectangle.h revision 3791
Diff to previous 3781
Merged ripley rectangular domain into trunk.


Revision 3781 - (view) (annotate) - [select for diffs]
Modified Mon Jan 23 22:18:49 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8703 byte(s)
Diff to previous 3776
Since setX() is not supported the constructors now take location and extent.
Python wrapper allows construction the old way with l0,l1 or with
tuples (x0,x1),(y0,y1).


Revision 3776 - (view) (annotate) - [select for diffs]
Modified Thu Jan 19 03:48:35 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8606 byte(s)
Diff to previous 3773
Finished 2D - all 2D PDE (non-lumped) tests pass now


Revision 3773 - (view) (annotate) - [select for diffs]
Modified Wed Jan 18 04:27:53 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8807 byte(s)
Diff to previous 3769
Adjusted interface for boundary conditions.


Revision 3769 - (view) (annotate) - [select for diffs]
Modified Tue Jan 17 04:09:55 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8375 byte(s)
Diff to previous 3766
Preparations for PDE boundary element assembly.
Removed some code that slipped in before.


Revision 3766 - (view) (annotate) - [select for diffs]
Modified Thu Jan 12 08:17:49 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8055 byte(s)
Diff to previous 3764
Checkpoint. Getting weipa to like ripley again.


Revision 3764 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 06:31:15 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 7762 byte(s)
Diff to previous 3762
Fixed integration now that elements overlap + code cleanup.


Revision 3762 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 00:01:45 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 8067 byte(s)
Diff to previous 3760
PDE assemblage with reduced order done.


Revision 3760 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 05:21:18 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 7401 byte(s)
Diff to previous 3756
-implemented addPDEToRHS() and setToSize()
-added a few missing calls to requireWrite()
-added assemblePDESystem() to Rectangle but haven't tested yet


Revision 3756 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 02:35:19 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 7157 byte(s)
Diff to previous 3755
Fixed interpolation from DOF to nodes and moved common code to the base class.


Revision 3755 - (view) (annotate) - [select for diffs]
Modified Thu Jan 5 06:51:31 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 7093 byte(s)
Diff to previous 3752
Made element IDs globally unique so ownSample can work (to be implemented).
Fixed couple block in 3D so PDEs seem to work now with MPI :-)


Revision 3752 - (view) (annotate) - [select for diffs]
Modified Tue Jan 3 08:06:36 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 7019 byte(s)
Diff to previous 3750
can solve PDEs in 2D with MPI now, boundary conditions still missing.


Revision 3750 - (view) (annotate) - [select for diffs]
Modified Fri Dec 23 01:20:34 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6922 byte(s)
Diff to previous 3748
Checkpoint - reinstated DOF FS and tried to fix couple blocks...


Revision 3748 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 07:36:19 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6978 byte(s)
Diff to previous 3746
PDE assembly in serial and 2D seems to be doing what it's supposed to when
boundary elements are not involved.


Revision 3746 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 00:02:22 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6655 byte(s)
Diff to previous 3744
In Ripley Solution==ContinuousFunction and ReducedSolution==ReducedCF now.
Removed a test in escript that relied on failure when trying to tag Data on
Solution/ReducedSolution.


Revision 3744 - (view) (annotate) - [select for diffs]
Modified Tue Dec 13 06:41:54 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6717 byte(s)
Diff to previous 3722
Implemented (Face)Elements->Reduced(Face)Elements interpolation and started
separating DOF and nodes.
Also, implemented operator==() so that a==b for different domain objects a and
b which are in the same state.


Revision 3722 - (view) (annotate) - [select for diffs]
Modified Wed Dec 7 05:53:22 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6655 byte(s)
Diff to previous 3713
All "util on ripley" tests pass now :-)
-added support for node/element/face tags
-implemented setToNormal()
-added a bunch of omp nowait


Revision 3713 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 04:43:29 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6377 byte(s)
Diff to previous 3711
Integrals in 2D and 3D for rectangle & brick elements & face elements in
regular and reduced orders.


Revision 3711 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 00:24:43 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6111 byte(s)
Diff to previous 3704
Interpolation & Gradient for reduced elements & faces.


Revision 3704 - (view) (annotate) - [select for diffs]
Modified Mon Dec 5 01:59:08 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 6003 byte(s)
Diff to previous 3702
Interpolation on faces.


Revision 3702 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 06:12:32 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 5821 byte(s)
Diff to previous 3701
Gradient for Rectangle elements.


Revision 3701 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 02:04:58 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 5498 byte(s)
Diff to previous 3699
Prepared interpolation methods.


Revision 3699 - (view) (annotate) - [select for diffs]
Modified Thu Dec 1 22:59:42 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 4998 byte(s)
Diff to previous 3697
getPattern() for Rectangle. Couple node numbering is likely to change once
we get to the PDE assembly.


Revision 3697 - (view) (annotate) - [select for diffs]
Modified Mon Nov 28 04:52:00 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 4785 byte(s)
Diff to previous 3691
[x] Rectangle node id's and weipa compatibility
[ ] Brick...


Revision 3691 - (view) (annotate) - [select for diffs]
Added Wed Nov 23 23:07:37 2011 UTC (7 years, 3 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.h
File length: 3733 byte(s)
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