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Revision 5136 - (view) (annotate) - [select for diffs]
Modified Tue Sep 9 07:13:55 2014 UTC (4 years, 5 months ago) by caltinay
File length: 25338 byte(s)
Diff to previous 5122
ripley now supports paso solvers again and returns an appropriate matrix type
id. Changed the getSystemMatrixTypeId() method to take a full SolverBuddy
instance and made some other simplifications.


Revision 5122 - (view) (annotate) - [select for diffs]
Modified Thu Aug 21 04:32:39 2014 UTC (4 years, 5 months ago) by caltinay
File length: 25565 byte(s)
Diff to previous 4988
Fast-forward to latest trunk to be able to use both Paso or cusp.


Revision 4988 - (view) (annotate) - [select for diffs]
Modified Wed Jun 4 01:15:10 2014 UTC (4 years, 8 months ago) by caltinay
File length: 24111 byte(s)
Diff to previous 4949
merge to current trunk


Revision 4949 - (view) (annotate) - [select for diffs]
Modified Mon May 19 05:54:58 2014 UTC (4 years, 8 months ago) by caltinay
File length: 24040 byte(s)
Diff to previous 4941
Fast forward to current trunk rev 4947.
All tests that don't require a direct solver pass without MPI.


Revision 4941 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:49:48 2014 UTC (4 years, 9 months ago) by caltinay
File length: 24727 byte(s)
Diff to previous 4940
first proof of concept - self-contained ripley system matrix with diagonal
storage, CG solver, no preconditioner, no MPI, no blocks, quite a few
quick'n'dirty hacks.
Solves poisson faster than paso :-)



Revision 4940 - (view) (annotate) - [select for diffs]
Modified Thu May 15 01:40:06 2014 UTC (4 years, 9 months ago) by caltinay
File length: 26073 byte(s)
Diff to previous 4934
A branch to have fun with diagonal storage for ripley.


Revision 4934 - (view) (annotate) - [select for diffs]
Modified Tue May 13 00:28:11 2014 UTC (4 years, 9 months ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 26073 byte(s)
Diff to previous 4836
This commit is brought to you by the number 4934 and the tool "meld".
Merge of partially complete split world code from branch.




Revision 4836 - (view) (annotate) - [select for diffs]
Modified Mon Apr 7 05:51:55 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25992 byte(s)
Diff to previous 4819
"Some" SystemMatrix clean up.....


Revision 4819 - (view) (annotate) - [select for diffs]
Modified Tue Apr 1 03:50:23 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25998 byte(s)
Diff to previous 4818
Pattern shared ptrs


Revision 4818 - (view) (annotate) - [select for diffs]
Modified Mon Mar 31 00:16:20 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 26026 byte(s)
Diff to previous 4803
SystemMatrixPattern shptr


Revision 4803 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 06:52:28 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 26016 byte(s)
Diff to previous 4800
Removed obsolete wrappers for malloc and friends.
Paso_Pattern -> paso::Pattern


Revision 4800 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 01:50:04 2014 UTC (4 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 26013 byte(s)
Diff to previous 4753
paso::SystemMatrixPattern


Revision 4753 - (view) (annotate) - [select for diffs]
Modified Mon Mar 17 02:39:44 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25993 byte(s)
Diff to previous 4738
added exceptions for conflicting assembler types, added tests for lame assemblers

Revision 4738 - (view) (annotate) - [select for diffs]
Modified Wed Mar 12 01:32:36 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25876 byte(s)
Diff to previous 4722
adding support for reading binary grids from gzip compressed binary files, ripley brick only so far

Revision 4722 - (view) (annotate) - [select for diffs]
Modified Wed Mar 5 05:29:25 2014 UTC (4 years, 11 months ago) by sshaw
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25691 byte(s)
Diff to previous 4721
vastly decreased ripley domain setup time under MPI (approximately from O(n*m) to O(n+m), n being shared nodes, m being the rank DOF)

Revision 4721 - (view) (annotate) - [select for diffs]
Modified Fri Feb 28 03:51:07 2014 UTC (4 years, 11 months ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25617 byte(s)
Diff to previous 4657
Fixing strange casts.
Removed old methods.


Revision 4657 - (view) (annotate) - [select for diffs]
Modified Thu Feb 6 06:12:20 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25778 byte(s)
Diff to previous 4638
I changed some files.
Updated copyright notices, added GeoComp.




Revision 4638 - (view) (annotate) - [select for diffs]
Modified Thu Jan 30 06:25:10 2014 UTC (5 years ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25710 byte(s)
Diff to previous 4629
Fixes necessary to get a clang/macports build working on 10.9

Revision 4629 - (view) (annotate) - [select for diffs]
Modified Fri Jan 24 03:29:25 2014 UTC (5 years ago) by sshaw
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25154 byte(s)
Diff to previous 4626
added dirac point interpolation to ripley (and fixed dirac points in Brick)
added fast wave assembler for Brick and minor correction to fast wave assembler for Rectangle


Revision 4626 - (view) (annotate) - [select for diffs]
Modified Wed Jan 22 06:07:34 2014 UTC (5 years ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25087 byte(s)
Diff to previous 4622
Eliminated all const_cast<Data*> hacks in ripley and finley now that
Data.getSampleDataRO returns a const pointer.


Revision 4622 - (view) (annotate) - [select for diffs]
Modified Fri Jan 17 04:55:41 2014 UTC (5 years, 1 month ago) by sshaw
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24912 byte(s)
Diff to previous 4618
Added dirac support to ripley, added interface for custom assemblers for ripleydomains (also added the custom assembler for 2D VTI waves), changed synthetic_VTI example to use the new, faster custom assembler


Revision 4618 - (view) (annotate) - [select for diffs]
Modified Wed Jan 15 04:35:19 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25851 byte(s)
Diff to previous 4615
Implemented reverse reading of grid data from netcdf files.
Fixes #44.


Revision 4615 - (view) (annotate) - [select for diffs]
Modified Mon Jan 13 05:05:33 2014 UTC (5 years, 1 month ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25836 byte(s)
Diff to previous 4521
Step 1 for #31: wrap parameters in an object.


Revision 4521 - (view) (annotate) - [select for diffs]
Modified Mon Aug 26 11:51:30 2013 UTC (5 years, 5 months ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25447 byte(s)
Diff to previous 4495
Remove bool_t
Part of random.



Revision 4495 - (view) (annotate) - [select for diffs]
Modified Fri Jul 5 02:19:47 2013 UTC (5 years, 7 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25104 byte(s)
Diff to previous 4357
Added support for more input data types in ER Mapper files.
Tests will follow soon.


Revision 4357 - (view) (annotate) - [select for diffs]
Modified Thu Apr 11 06:07:14 2013 UTC (5 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25076 byte(s)
Diff to previous 4340
templated writeBinaryGrid and a bit of cleanup.


Revision 4340 - (view) (annotate) - [select for diffs]
Modified Fri Mar 22 04:38:36 2013 UTC (5 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25029 byte(s)
Diff to previous 4334
added ripley method that returns grid parameters as python tuple.


Revision 4334 - (view) (annotate) - [select for diffs]
Modified Thu Mar 21 06:00:14 2013 UTC (5 years, 10 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24858 byte(s)
Diff to previous 4284
Preparations for Voxet (GOCAD) binary grid output + code clean up.
Changed node id's order to remove code duplication in weipa.
More work to do...


Revision 4284 - (view) (annotate) - [select for diffs]
Modified Thu Mar 7 00:43:48 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24745 byte(s)
Diff to previous 4277
Replaced dummy implementations by pure virtual methods.


Revision 4277 - (view) (annotate) - [select for diffs]
Modified Wed Mar 6 01:30:41 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24887 byte(s)
Diff to previous 4255
Implemented claimed support for mixing data with different resolutions.


Revision 4255 - (view) (annotate) - [select for diffs]
Modified Wed Feb 27 03:06:21 2013 UTC (5 years, 11 months ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24731 byte(s)
Diff to previous 4211
Hopefully, this will address the interpolation problems.

New canInterpolate() function exposed to python which calls probeInterpolation

AbstractDomain now has an additional virtual.
preferredIntrpolationOnDomain()

This will return 0 if interpolation is impossible, 1 if possible and preferred.
It will return -1 if interpolation is possible and preferred in the 
oposite direction.

A value of -1 does not say that the proposed interpolation is possible or not.
Rather it indicates "please use the other way".
If you really _need_ to test it that way, use probeInterpolationOnDomain 



Revision 4211 - (view) (annotate) - [select for diffs]
Modified Mon Feb 18 23:54:46 2013 UTC (5 years, 11 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24349 byte(s)
Diff to previous 4154
Implemented interpolation from Reduced[Face]Elements to [Face]Elements and
changed regularization to compute gradient on Function instead of
ReducedFunction. Results differ slightly so this should help with the accuracy.


Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (6 years ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24210 byte(s)
Diff to previous 4013
Round 1 of copyright fixes

Revision 4013 - (view) (annotate) - [select for diffs]
Modified Thu Oct 4 03:13:27 2012 UTC (6 years, 4 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24210 byte(s)
Diff to previous 3981
Implemented netCDF grid reader analogous to binary grid reader in ripley.


Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (6 years, 4 months ago) by jfenwick
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24006 byte(s)
Diff to previous 3971
First pass of updating copyright notices

Revision 3971 - (view) (annotate) - [select for diffs]
Modified Wed Sep 19 02:55:35 2012 UTC (6 years, 4 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 23887 byte(s)
Diff to previous 3915
Implemented binary grid reader in ripley which is now used in ER Mapper source.
Interface/details likely to change but need to get this running now.


Revision 3915 - (view) (annotate) - [select for diffs]
Modified Mon Jun 25 02:17:58 2012 UTC (6 years, 7 months ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 23700 byte(s)
Diff to previous 3836
Added declspecs for all ripley classes.


Revision 3836 - (view) (annotate) - [select for diffs]
Modified Thu Feb 16 03:17:18 2012 UTC (7 years ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 25110 byte(s)
Diff to previous 3793
Transport problem support for ripley.


Revision 3793 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 07:39:43 2012 UTC (7 years ago) by gross
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24510 byte(s)
Diff to previous 3792
new implementation of FCT solver with some modifications to the python interface

Revision 3792 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 06:16:25 2012 UTC (7 years ago) by caltinay
Original Path: trunk/ripley/src/RipleyDomain.h
File length: 24538 byte(s)
Copied from: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h revision 3791
Diff to previous 3791
Merged ripley rectangular domain into trunk.


Revision 3791 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 05:10:22 2012 UTC (7 years ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 24538 byte(s)
Diff to previous 3780
Getting ready to merge with trunk.


Revision 3780 - (view) (annotate) - [select for diffs]
Modified Mon Jan 23 06:26:40 2012 UTC (7 years ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 24540 byte(s)
Diff to previous 3776
Removed addPDEToLumpedSystem() as it is handled at python level.
Ensured tests for setX() don't fail if unsupported.


Revision 3776 - (view) (annotate) - [select for diffs]
Modified Thu Jan 19 03:48:35 2012 UTC (7 years ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 24830 byte(s)
Diff to previous 3773
Finished 2D - all 2D PDE (non-lumped) tests pass now


Revision 3773 - (view) (annotate) - [select for diffs]
Modified Wed Jan 18 04:27:53 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 25261 byte(s)
Diff to previous 3769
Adjusted interface for boundary conditions.


Revision 3769 - (view) (annotate) - [select for diffs]
Modified Tue Jan 17 04:09:55 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 24830 byte(s)
Diff to previous 3766
Preparations for PDE boundary element assembly.
Removed some code that slipped in before.


Revision 3766 - (view) (annotate) - [select for diffs]
Modified Thu Jan 12 08:17:49 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 23981 byte(s)
Diff to previous 3764
Checkpoint. Getting weipa to like ripley again.


Revision 3764 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 06:31:15 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 23683 byte(s)
Diff to previous 3761
Fixed integration now that elements overlap + code cleanup.


Revision 3761 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 06:50:33 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 23361 byte(s)
Diff to previous 3756
Can solve full order systems of PDEs in 2D and 3D now.


Revision 3756 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 02:35:19 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 22455 byte(s)
Diff to previous 3754
Fixed interpolation from DOF to nodes and moved common code to the base class.


Revision 3754 - (view) (annotate) - [select for diffs]
Modified Wed Jan 4 07:07:37 2012 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 20988 byte(s)
Diff to previous 3750
checkpoint. 3D single PDEs almost working


Revision 3750 - (view) (annotate) - [select for diffs]
Modified Fri Dec 23 01:20:34 2011 UTC (7 years, 1 month ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 20843 byte(s)
Diff to previous 3748
Checkpoint - reinstated DOF FS and tried to fix couple blocks...


Revision 3748 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 07:36:19 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 20576 byte(s)
Diff to previous 3746
PDE assembly in serial and 2D seems to be doing what it's supposed to when
boundary elements are not involved.


Revision 3746 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 00:02:22 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19896 byte(s)
Diff to previous 3744
In Ripley Solution==ContinuousFunction and ReducedSolution==ReducedCF now.
Removed a test in escript that relied on failure when trying to tag Data on
Solution/ReducedSolution.


Revision 3744 - (view) (annotate) - [select for diffs]
Modified Tue Dec 13 06:41:54 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 20018 byte(s)
Diff to previous 3733
Implemented (Face)Elements->Reduced(Face)Elements interpolation and started
separating DOF and nodes.
Also, implemented operator==() so that a==b for different domain objects a and
b which are in the same state.


Revision 3733 - (view) (annotate) - [select for diffs]
Modified Fri Dec 9 04:02:56 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19755 byte(s)
Diff to previous 3722
escript on ripley tests pass. However, returning 0 for number of point elements
and DOF id's are bogus.


Revision 3722 - (view) (annotate) - [select for diffs]
Modified Wed Dec 7 05:53:22 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19606 byte(s)
Diff to previous 3711
All "util on ripley" tests pass now :-)
-added support for node/element/face tags
-implemented setToNormal()
-added a bunch of omp nowait


Revision 3711 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 00:24:43 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19209 byte(s)
Diff to previous 3702
Interpolation & Gradient for reduced elements & faces.


Revision 3702 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 06:12:32 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19081 byte(s)
Diff to previous 3701
Gradient for Rectangle elements.


Revision 3701 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 02:04:58 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 19079 byte(s)
Diff to previous 3697
Prepared interpolation methods.


Revision 3697 - (view) (annotate) - [select for diffs]
Modified Mon Nov 28 04:52:00 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 18764 byte(s)
Diff to previous 3691
[x] Rectangle node id's and weipa compatibility
[ ] Brick...


Revision 3691 - (view) (annotate) - [select for diffs]
Modified Wed Nov 23 23:07:37 2011 UTC (7 years, 2 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 17812 byte(s)
Diff to previous 3670
Next iteration


Revision 3670 - (view) (annotate) - [select for diffs]
Added Wed Nov 16 02:21:18 2011 UTC (7 years, 3 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/RipleyDomain.h
File length: 20517 byte(s)
First steps...


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