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revision 602 by gross, Fri Mar 17 06:57:46 2006 UTC revision 995 by ksteube, Sun Feb 25 22:38:18 2007 UTC
# Line 1  Line 1 
1    #!/bin/sh
2    
3    #
4    # Submit a PBS job to run the tests
5    #
6    #   Usage: autotest-scons       # Short testing, only C++ tests
7    #   Usage: autotest-scons run_tests # Short testing, only C++ tests
8    #   Usage: autotest-scons all_tests # Long testing, C++ and python tests
9    #
10    # Copy this somewhere and run it every day via cron
11    #
12    # This file should be maintained in SVN as esys13/trunk/autotest-scons,
13    # be sure to copy it there and commit after modification
14    #
15    
16    # Which tests should we run?
17    target='run_tests'  # Default scons target that runs the tests
18    test "x$1" != "x" && target="$1"
19    requested_cpus=2
20    test "x$target" = "xall_tests" && requested_cpus=4
21    
22    MAIL_RECIPIENTS="l.gross@uq.edu.au matt@esscc.uq.edu.au robert.woodcock@csiro.au Peter.Hornby@csiro.au k.steube@uq.edu.au"
23    # MAIL_RECIPIENTS="k.steube@uq.edu.au"
24    
25    # This time is when the job was submitted. If it waits in the queue it might run on another day.
26    # This date is also used to create the sandbox directory where the tests are run.
27    RunDate=`date '+%Y_%m_%d'`  # Time stamp for log file names
28    
29    WorkDir=/raid3/ksteube/AutoTests
30    cd $WorkDir
31    
32    # Where to put the output of scons run_tests
33    out_file="$WorkDir/Logs/$RunDate.test.output"
34    
35    # Save the name of this script
36    SCRIPT_NAME=$0
37    
38    # Below here \$variable means I want the variable interpreted when PBS runs the job, not when the job is submitted
39    # Similarly for \`...\`
40    
41    # Write the PBS script to run the tests
42    cat << EOF > Logs/$RunDate.pbs.script.sh
43  #!/bin/bash  #!/bin/bash
44    
45  # $Id: autotest-scons 162 2005-11-11 00:09:59Z svn $  #PBS -q q80
46  # An explicit testing script for esys using the scons build system  #PBS -N autotest
47    #PBS -l ncpus=$requested_cpus
48    #PBS -o $RunDate.pbs.stdout
49    #PBS -e $RunDate.pbs.stderr
50    #PBS -W umask=022
51    
52    echo "PBS_JOBNAME       \$PBS_JOBNAME"
53    echo "PBS_JOBID         \$PBS_JOBID"
54    echo "PBS_QUEUE         \$PBS_QUEUE"
55    echo "NCPUS             \$NCPUS"
56    echo "USER              \$USER"
57    echo "PBS_O_HOST        \$PBS_O_HOST"
58    echo "PBS_O_WORKDIR     \$PBS_O_WORKDIR"
59    echo "PBS_O_SHELL       \$PBS_O_SHELL"
60    date
61    echo ""
62    echo ""
63    
 # list of users to email test results to  
 MAIL_RECIPIENTS="jgs@esscc.uq.edu.au gross@esscc.uq.edu.au elspeth@esscc.uq.edu.au matt@esscc.uq.edu.au"  
64    
 # the python tests to run  
 BRUCE_PYTESTS="ImportTest.py BruceTest.py test_utilOnBruce.py"  
 ESCRIPT_PYTESTS="ImportTest.py BinaryOps.py UnaryOps.py SliceGetting.py SliceSetting.py MiscTests.py ArchiveTests.py newEscriptTests.py test_xml.py insituTests.py s2.py"  
 FINLEY_PYTESTS="ImportTest.py finleyTest.py SimpleSolve.py RecTest.py test_linearPDEsOnFinley.py test_generators.py test_visualization_interface.py test_utilOnFinley.py"  
   
 echo "===> cd $1"  
 cd $1  
 if [ $? != 0 ]  
 then  
   echo "couldnt cd $1"  
   echo "couldnt cd $1" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
   exit 1  
 fi  
   
 PWD=`pwd`  
 echo "===> working in: $PWD"  
   
 # define compiler executable and library locations  
 export PATH=/opt/intel/cmplrs/80.058/intel_cc_80/bin:$PATH  
 export LD_LIBRARY_PATH=/opt/intel/cmplrs/80.058/intel_cc_80/lib  
   
 # define python location  
 export PATH=/raid2/tools/python-2.3.4/bin:$PATH  
   
 # set library and python paths  
 export LD_LIBRARY_PATH=$PWD/lib:/raid2/tools/boost/lib:$LD_LIBRARY_PATH  
 export PYTHONPATH=$PWD  
   
 # set openmp settings  
 export OMP_SCHEDULE="dynamic"  
 export OMP_NUM_THREADS=4  
 export OMP_DYNAMIC=TRUE  
 export OMP_NESTED=FALSE  
   
 echo "===> svn update"  
 svn update  
 if [ $? != 0 ]  
 then  
   echo "svn update failed"  
   echo "svn update failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
   exit 2  
 fi  
   
 echo "===> scons building esys"  
 scons  
 if [ $? != 0 ]  
 then  
   echo "scons build failed"  
   echo "scons build failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
   exit 3  
 fi  
   
 echo "===> building unit_tests"  
 scons build_tests  
 if [ $? != 0 ]  
 then  
   echo "unit_test build failed"  
   echo "unit_test build failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
   exit 3  
 fi  
   
 FAIL=0  
   
 echo "===> running unit_tests"  
 scons run_tests  
 if [ $? != 0 ]  
 then  
   echo "unit_testing failed"  
   echo "unit_test failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
   FAIL=1  
 fi  
   
 cd escript/test/python  
 for pytest in $ESCRIPT_PYTESTS  
 do  
   echo "===>running escript python test: $pytest"  
   python $pytest  
   if [ $? != 0 ]  
   then  
     echo "python testing failed for $pytest in module $module"  
     echo "escript py_test: $pytest failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
     FAIL=1  
   fi  
 done  
 cd ../../..  
65    
66  cd finley/test/python  START=\`date '+%Y/%m/%d %H:%M'\`
67  for pytest in $FINLEY_PYTESTS  
68  do  finish () {
69    echo "running finley python test: $pytest"    # state will be 'FAILURE' or 'SUCCESS'
70    python $pytest    state="\$1"
71    if [ $? != 0 ]    date
72    then    # Clean up the sandbox
73      echo "python testing failed for $pytest in module $module"    cd $WorkDir
74      echo "finley py_test: $pytest failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS    /bin/rm -rf sandbox.$RunDate
75      FAIL=1    END=\`date '+%Y/%m/%d %H:%M'\`
76      cat << END_MSG | mail -s "ESYS_TESTS $target $RunDate \$state" $MAIL_RECIPIENTS
77    \$2.
78    The tests ran from \$START to \$END on \$NCPUS CPUs
79    See the log files in $WorkDir/Logs/$RunDate*
80    This mail was sent by $SCRIPT_NAME
81    running as \$USER on \`hostname\`.
82    END_MSG
83      if [ "x\$state" = "xFAILURE" ]; then
84        touch Logs/$RunDate.FAILURE
85        exit 1
86    fi    fi
87  done    exit 0
88  cd ../../..  }
89    
 cd bruce/test/python  
 for pytest in $BRUCE_PYTESTS  
 do  
   echo "running bruce python test: $pytest"  
   python $pytest  
   if [ $? != 0 ]  
   then  
     echo "python testing failed for $pytest in module $module"  
     echo "bruce py_test: $pytest failed" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  
     FAIL=1  
   fi  
 done  
 cd ../../..  
90    
91  if [ $FAIL == 0 ]  cd $WorkDir             || finish FAILURE "Could not cd to WorkDir $WorkDir"
92  then  
93      echo success  # Create an empty out_file
94      echo "success" | mail -s "esys autotest-scons results" $MAIL_RECIPIENTS  cat /dev/null > $out_file       || finish FAILURE "Could not create out_file $out_file"
95  fi  
96  exit 0  umask 022
97    
98    test -d sandbox.$RunDate        && finish FAILURE "Today's sandbox already exists"
99    mkdir sandbox.$RunDate          || finish FAILURE "Could not mkdir sandbox"
100    cd sandbox.$RunDate         || finish FAILURE "Could not cd to sandbox"
101    
102    echo "Checking out esys13/trunk"
103    svn checkout svn+ssh://shake200.esscc.uq.edu.au/home/www_svn/repos/esys13/trunk >> $out_file 2>&1 || finish FAILURE "Could not check out esys13/trunk"
104    
105    # Load modules
106    . /opt/modules/default/init/bash
107    module use /raid2/matt/modules/modulefiles
108    module use /raid2/toolspp4/modulefiles/gcc-3.3.6
109    module use /usr/share/modules/modulefiles
110    module load esys/env    # Recommended modules
111    module load doxygen/1.4.6
112    module load boost/1.33.0/python-2.4.1
113    module load gmsh-1.65.0
114    
115    # How many threads? One per CPU.
116    export OMP_NUM_THREADS=\$NCPUS
117    
118    # Run the tests
119    echo "Running the tests $target"
120    cd trunk                || finish FAILURE "Could not cd to trunk"
121    scons -j \$NCPUS $target >> $out_file 2>&1      || finish FAILURE "Could not run scons $target"
122    
123    echo "Cleaning up after the tests"
124    
125    # Delete files older than 60 days
126    find $WorkDir -atime +60 -exec rm -f {} \;
127    
128    finish SUCCESS "Successfully ran 'scons $target' on \`hostname\`"
129    
130    EOF
131    
132    # cd to the logs area so the PBS logs are deposited there
133    cd $WorkDir/Logs
134    
135    # Submit the job
136    . /opt/modules/default/init/sh
137    module load pbspro
138    
139    # Submit the job
140    qsub -S /bin/bash $RunDate.pbs.script.sh > /dev/null
141    

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