/[escript]/branches/domexper/dudley/src/CPPAdapter/dudleycpp.cpp
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trunk/esys2/finley/src/CPPAdapter/finleycpp.cpp revision 108 by jgs, Thu Jan 27 06:21:59 2005 UTC trunk/finley/src/CPPAdapter/finleycpp.cpp revision 1062 by gross, Mon Mar 26 06:17:53 2007 UTC
# Line 14  Line 14 
14    
15  ******************************************************************************/  ******************************************************************************/
16    
17    #ifdef PASO_MPI
18    #include <mpi.h>
19    #endif
20  extern "C" {  extern "C" {
21  #include "finley/finleyC/Finley.h"  #include "../Finley.h"
22  }  }
 #include "finley/CPPAdapter/MeshAdapter.h"  
 #include "finley/CPPAdapter/MeshAdapterFactory.h"  
 #include "finley/CPPAdapter/SystemMatrixAdapter.h"  
23    
24  #include "esysUtils/EsysException.h"  #include "MeshAdapter.h"
25    #include "MeshAdapterFactory.h"
26    #include "SystemMatrixAdapter.h"
27    
28    #include "FinleyAdapterException.h"
29    // #include "esysUtils/EsysException.h"
30  #include "esysUtils/esysExceptionTranslator.h"  #include "esysUtils/esysExceptionTranslator.h"
31    
32  #include "escript/Data/AbstractContinuousDomain.h"  #include "escript/AbstractContinuousDomain.h"
33    
34  #include <boost/python.hpp>  #include <boost/python.hpp>
35  #include <boost/python/module.hpp>  #include <boost/python/module.hpp>
# Line 34  extern "C" { Line 39  extern "C" {
39  using namespace boost::python;  using namespace boost::python;
40    
41  /**  /**
42     @memo     \page finley Finley
43     finley is the python module name that contains the interfaces     Finley is the python module name that contains the interfaces
44     to the C++ wrapper to finley.     to the C++ wrapper to finley.
45    
46     @version 1.0.0     \version 1.0.0
   
    @doc  
47    
48     Class Description:     \section class_desc Class Description:
49     Data     Data
50    
51     Class Limitations:     \section class_limits Class Limitations:
52     None     None
53    
54     Class Conditions of Use:     \section class_conds Class Conditions of Use:
55     None     None
56    
57     Throws:     \section throws Throws:
58     None     None
59    
60  */  */
# Line 87  BOOST_PYTHON_MODULE(finleycpp) Line 90  BOOST_PYTHON_MODULE(finleycpp)
90    // return pointers.    // return pointers.
91    
92    def("ReadMesh",finley::readMesh,    def("ReadMesh",finley::readMesh,
93        (arg("fileName"),arg("integrationOrder")=-1),        (arg("fileName"),arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimizeLabeling")=true),
94          return_value_policy<manage_new_object>());
95    
96      def("ReadGmsh",finley::readGmsh,
97          (arg("fileName"),arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimizeLabeling")=true),
98        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
99    
100    def ("Brick",finley::brick,    def ("Brick",finley::brick,
# Line 95  BOOST_PYTHON_MODULE(finleycpp) Line 102  BOOST_PYTHON_MODULE(finleycpp)
102        arg("order")=1,        arg("order")=1,
103        arg("l0")=1.0,arg("l1")=1.0,arg("l2")=1.0,        arg("l0")=1.0,arg("l1")=1.0,arg("l2")=1.0,
104        arg("periodic0")=false,arg("periodic1")=false,arg("periodic2")=false,        arg("periodic0")=false,arg("periodic1")=false,arg("periodic2")=false,
105        arg("integrationOrder")=-1,        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,
106        arg("useElementsOnFace")=false),        arg("useElementsOnFace")=false),
107        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
108    
# Line 103  BOOST_PYTHON_MODULE(finleycpp) Line 110  BOOST_PYTHON_MODULE(finleycpp)
110        (arg("n0")=1,arg("n1")=1,arg("order")=1,        (arg("n0")=1,arg("n1")=1,arg("order")=1,
111        arg("l0")=1.0,arg("l1")=1.0,        arg("l0")=1.0,arg("l1")=1.0,
112        arg("periodic0")=false,arg("periodic1")=false,        arg("periodic0")=false,arg("periodic1")=false,
113        arg("integrationOrder")=-1,        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,
114        arg("useElementsOnFace")=false),        arg("useElementsOnFace")=false),
115        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
116    
117    def("Interval",finley::interval,    def("Interval",finley::interval,
118        (arg("n1")=1,arg("order")=1,        (arg("n1")=1,arg("order")=1,
119        arg("l1")=1.0,arg("periodic0")=false,        arg("l1")=1.0,arg("periodic0")=false,
120        arg("integrationOrder")=-1,        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,
121        arg("useElementsOnFace")=false),        arg("useElementsOnFace")=false),
122        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
123    
124      def("Merge",finley::meshMerge,
125          return_value_policy<manage_new_object>());
126    
127    def("GlueFaces",finley::glueFaces,    def("GlueFaces",finley::glueFaces,
128        (arg("safetyFactor")=0.2,        (arg("safetyFactor")=0.2,
129        arg("tolerance")=std::numeric_limits<double>::epsilon()),        arg("tolerance")=1.e-8,
130          arg("optimizeLabeling")=true),
131        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
132    
133    def("JoinFaces",finley::joinFaces,    def("JoinFaces",finley::joinFaces,
134        (arg("safetyFactor")=0.2,        (arg("safetyFactor")=0.2,
135        arg("tolerance")=std::numeric_limits<double>::epsilon()),        arg("tolerance")=1.e-8,
136          arg("optimizeLabeling")=true),
137        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
138    
139    register_exception_translator<esysUtils::EsysException>(&esysUtils::esysExceptionTranslator);    register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator));
140    
141    class_<finley::MeshAdapter, bases<escript::AbstractContinuousDomain> >    class_<finley::MeshAdapter, bases<escript::AbstractContinuousDomain> >
142        ("MeshAdapter",init<optional <Finley_Mesh*> >())        ("MeshAdapter",init<optional <Finley_Mesh*> >())
# Line 137  BOOST_PYTHON_MODULE(finleycpp) Line 149  BOOST_PYTHON_MODULE(finleycpp)
149        .def("addPDEToRHS",&finley::MeshAdapter::addPDEToRHS)        .def("addPDEToRHS",&finley::MeshAdapter::addPDEToRHS)
150        .def("newOperator",&finley::MeshAdapter::newSystemMatrix)        .def("newOperator",&finley::MeshAdapter::newSystemMatrix)
151        .def("getSystemMatrixTypeId",&finley::MeshAdapter::getSystemMatrixTypeId)        .def("getSystemMatrixTypeId",&finley::MeshAdapter::getSystemMatrixTypeId)
152          .def("setX",&finley::MeshAdapter::setNewX)
153        .def("getX",&finley::MeshAdapter::getX)        .def("getX",&finley::MeshAdapter::getX)
154        .def("getNormal",&finley::MeshAdapter::getNormal)        .def("getNormal",&finley::MeshAdapter::getNormal)
155        .def("getSize",&finley::MeshAdapter::getSize);        .def("getSize",&finley::MeshAdapter::getSize)
156          .def("saveDX",&finley::MeshAdapter::saveDX)
157          .def("saveVTK",&finley::MeshAdapter::saveVTK)
158          .def("setTagMap",&finley::MeshAdapter::setTagMap)
159          .def("getTag",&finley::MeshAdapter::getTag)
160          .def("isValidTagName",&finley::MeshAdapter::isValidTagName)
161          .def("showTagNames",&finley::MeshAdapter::showTagNames);
162    
163    
164    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >
165        ("OperatorAdapter",no_init)        ("OperatorAdapter",no_init)
166        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)
167        .def("setValue",&finley::SystemMatrixAdapter::setValue)        .def("resetValues",&finley::SystemMatrixAdapter::resetValues)
168        .def("resetSolver",&finley::SystemMatrixAdapter::resetSolver)        .def("saveMM",&finley::SystemMatrixAdapter::saveMM)
169        .def("saveMM",&finley::SystemMatrixAdapter::saveMM);        .def("saveHB",&finley::SystemMatrixAdapter::saveHB);
170    
171  }  }

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