/[escript]/branches/domexper/dudley/src/CPPAdapter/finleycpp.cpp
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revision 1204 by gross, Sat Jun 23 11:43:12 2007 UTC revision 1345 by ksteube, Wed Nov 14 07:53:34 2007 UTC
# Line 1  Line 1 
1  // $Id$  
2  /*  /* $Id$ */
3   ******************************************************************************  
4   *                                                                            *  /*******************************************************
5   *       COPYRIGHT ACcESS 2004 -  All Rights Reserved                         *   *
6   *                                                                            *   *           Copyright 2003-2007 by ACceSS MNRF
7   * This software is the property of ACcESS.  No part of this code             *   *       Copyright 2007 by University of Queensland
8   * may be copied in any form or by any means without the expressed written    *   *
9   * consent of ACcESS.  Copying, use or modification of this software          *   *                http://esscc.uq.edu.au
10   * by any unauthorised person is illegal unless that                          *   *        Primary Business: Queensland, Australia
11   * person has a software license agreement with ACcESS.                       *   *  Licensed under the Open Software License version 3.0
12   *                                                                            *   *     http://www.opensource.org/licenses/osl-3.0.php
13   ******************************************************************************   *
14     *******************************************************/
 ******************************************************************************/  
15    
16  #ifdef PASO_MPI  #ifdef PASO_MPI
17  #include <mpi.h>  #include <mpi.h>
# Line 89  BOOST_PYTHON_MODULE(finleycpp) Line 88  BOOST_PYTHON_MODULE(finleycpp)
88    // NOTE: The return_value_policy is necessary for functions that    // NOTE: The return_value_policy is necessary for functions that
89    // return pointers.    // return pointers.
90    
91      def("LoadMesh",finley::loadMesh,
92          (arg("fileName")="file.nc"),
93          return_value_policy<manage_new_object>());
94    def("ReadMesh",finley::readMesh,    def("ReadMesh",finley::readMesh,
95        (arg("fileName")="file.fly",arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimizeLabeling")=true),        (arg("fileName")="file.fly",arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimize")=true),
96        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
97    
98    def("ReadGmsh",finley::readGmsh,    def("ReadGmsh",finley::readGmsh,
99        (arg("fileName")="file.msh",arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimizeLabeling")=true),        (arg("fileName")="file.msh",arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimize")=true),
100        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
101    
102    def ("Brick",finley::brick,    def ("Brick",finley::brick,
# Line 103  BOOST_PYTHON_MODULE(finleycpp) Line 105  BOOST_PYTHON_MODULE(finleycpp)
105        arg("l0")=1.0,arg("l1")=1.0,arg("l2")=1.0,        arg("l0")=1.0,arg("l1")=1.0,arg("l2")=1.0,
106        arg("periodic0")=false,arg("periodic1")=false,arg("periodic2")=false,        arg("periodic0")=false,arg("periodic1")=false,arg("periodic2")=false,
107        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,
108        arg("useElementsOnFace")=false),        arg("useElementsOnFace")=false,
109          arg("useFullElementOrder")=false,
110          arg("optimize")=false),
111        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
112    
113    def ("Rectangle",finley::rectangle,    def ("Rectangle",finley::rectangle,
# Line 111  BOOST_PYTHON_MODULE(finleycpp) Line 115  BOOST_PYTHON_MODULE(finleycpp)
115        arg("l0")=1.0,arg("l1")=1.0,        arg("l0")=1.0,arg("l1")=1.0,
116        arg("periodic0")=false,arg("periodic1")=false,        arg("periodic0")=false,arg("periodic1")=false,
117        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,        arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,
118        arg("useElementsOnFace")=false),        arg("useElementsOnFace")=false,
119        return_value_policy<manage_new_object>());        arg("useFullElementOrder")=false,
120          arg("optimize")=false),
   def("Interval",finley::interval,  
       (arg("n1")=1,arg("order")=1,  
       arg("l1")=1.0,arg("periodic0")=false,  
       arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  
       arg("useElementsOnFace")=false),  
121        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
122    
123    def("Merge",finley::meshMerge,    def("Merge",finley::meshMerge,
# Line 127  BOOST_PYTHON_MODULE(finleycpp) Line 126  BOOST_PYTHON_MODULE(finleycpp)
126    def("GlueFaces",finley::glueFaces,    def("GlueFaces",finley::glueFaces,
127        (arg("safetyFactor")=0.2,        (arg("safetyFactor")=0.2,
128        arg("tolerance")=1.e-8,        arg("tolerance")=1.e-8,
129        arg("optimizeLabeling")=true),        arg("optimize")=true),
130        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
131    
132    def("JoinFaces",finley::joinFaces,    def("JoinFaces",finley::joinFaces,
133        (arg("safetyFactor")=0.2,        (arg("safetyFactor")=0.2,
134        arg("tolerance")=1.e-8,        arg("tolerance")=1.e-8,
135        arg("optimizeLabeling")=true),        arg("optimize")=true),
136        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
137    
138    register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator));    register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator));
# Line 142  BOOST_PYTHON_MODULE(finleycpp) Line 141  BOOST_PYTHON_MODULE(finleycpp)
141        ("MeshAdapter",init<optional <Finley_Mesh*> >())        ("MeshAdapter",init<optional <Finley_Mesh*> >())
142        .def(init<const finley::MeshAdapter&>())        .def(init<const finley::MeshAdapter&>())
143        .def("write",&finley::MeshAdapter::write)        .def("write",&finley::MeshAdapter::write)
144          .def("print_mesh_info",&finley::MeshAdapter::Print_Mesh_Info,(arg("full")=false))
145          .def("dump",&finley::MeshAdapter::dump)
146        .def("getDescription",&finley::MeshAdapter::getDescription)        .def("getDescription",&finley::MeshAdapter::getDescription)
147        .def("getDim",&finley::MeshAdapter::getDim)        .def("getDim",&finley::MeshAdapter::getDim)
148        .def("getDataShape",&finley::MeshAdapter::getDataShape)        .def("getDataShape",&finley::MeshAdapter::getDataShape)
# Line 159  BOOST_PYTHON_MODULE(finleycpp) Line 160  BOOST_PYTHON_MODULE(finleycpp)
160        .def("setTagMap",&finley::MeshAdapter::setTagMap)        .def("setTagMap",&finley::MeshAdapter::setTagMap)
161        .def("getTag",&finley::MeshAdapter::getTag)        .def("getTag",&finley::MeshAdapter::getTag)
162        .def("isValidTagName",&finley::MeshAdapter::isValidTagName)        .def("isValidTagName",&finley::MeshAdapter::isValidTagName)
163        .def("showTagNames",&finley::MeshAdapter::showTagNames);        .def("showTagNames",&finley::MeshAdapter::showTagNames)
164          .def("getMPISize",&finley::MeshAdapter::getMPISize)
165          .def("getMPIRank",&finley::MeshAdapter::getMPIRank);
166    
167    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >
168        ("OperatorAdapter",no_init)        ("OperatorAdapter",no_init)
169          .def("print_matrix_info",&finley::SystemMatrixAdapter::Print_Matrix_Info,(arg("full")=false))
170        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)
171        .def("resetValues",&finley::SystemMatrixAdapter::resetValues)        .def("resetValues",&finley::SystemMatrixAdapter::resetValues)
172        .def("saveMM",&finley::SystemMatrixAdapter::saveMM)        .def("saveMM",&finley::SystemMatrixAdapter::saveMM)

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