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revision 1023 by gross, Tue Mar 13 05:43:36 2007 UTC revision 2235 by jfenwick, Tue Feb 3 01:47:47 2009 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  
2  #  ########################################################
 #              http://www.access.edu.au  
 #       Primary Business: Queensland, Australia  
 #  Licensed under the Open Software License version 3.0  
 #     http://www.opensource.org/licenses/osl-3.0.php  
3  #  #
4    # Copyright (c) 2003-2008 by University of Queensland
5    # Earth Systems Science Computational Center (ESSCC)
6    # http://www.uq.edu.au/esscc
7  #  #
8    # Primary Business: Queensland, Australia
9    # Licensed under the Open Software License version 3.0
10    # http://www.opensource.org/licenses/osl-3.0.php
11  #  #
12    ########################################################
13    
14    
 # top-level Scons configuration file for all esys13 modules  
 # Begin initialisation Section  
 # all of this section just intialises default environments and helper  
 # scripts. You shouldn't need to modify this section.  
15  EnsureSConsVersion(0,96,91)  EnsureSConsVersion(0,96,91)
16  EnsurePythonVersion(2,3)  EnsurePythonVersion(2,3)
17    
18  # import tools:  import sys, os, re, socket
19  import glob  
 import sys, os  
 import socket  
20  # Add our extensions  # Add our extensions
21  if sys.path.count('scons')==0: sys.path.append('scons')  if os.path.isdir('scons'): sys.path.append('scons')
22  import scons_extensions  import scons_extensions
23    
24  # check if UMFPACK is installed on the system:  # Use /usr/lib64 if available, else /usr/lib
25  if os.path.isdir('/opt/UMFPACK/Include') and os.path.isdir('/opt/UMFPACK/Lib'):  usr_lib = '/usr/lib'
26     umf_path_default='/opt/UMFPACK/Include'  if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'
27     umf_lib_path_default='/opt/UMFPACK/Lib'  
28     umf_libs_default=['umfpack']  # The string python2.4 or python2.5
29  else:  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])
    umf_path_default=None  
    umf_lib_path_default=None  
    umf_libs_default=None  
   
 if os.path.isdir('/opt/AMD/Include') and os.path.isdir('/opt/AMD/Lib'):  
    amd_path_default='/opt/AMD/Include'  
    amd_lib_path_default='/opt/AMD/Lib'  
    amd_libs_default=['amd']  
 else:  
    amd_path_default=None  
    amd_lib_path_default=None  
    amd_libs_default=None  
   
 if os.path.isdir('/opt/UFconfig'):  
    ufc_path_default='/opt/UFconfig'  
 else:  
    ufc_path_default=None  
   
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 if ARGUMENTS.get('options_file',0):  
    options_file = ARGUMENTS.get('options_file',0)  
 else:  
    from string import ascii_letters,digits  
    hostname=""  
    for s in socket.gethostname().split('.')[0]:  
       if s in ascii_letters+digits:  
          hostname+=s  
       else:  
          hostname+="_"  
    options_file = "scons/"+hostname+"_options.py"  
 print "option file is ",options_file  
30    
31    # MS Windows support, many thanks to PH
32    IS_WINDOWS_PLATFORM = (os.name== "nt")
33    
34    prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)
35    
36    # Read configuration options from file scons/<hostname>_options.py
37    hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])
38    tmp = os.path.join("scons",hostname+"_options.py")
39    options_file = ARGUMENTS.get('options_file', tmp)
40    if not os.path.isfile(options_file):
41      options_file = False
42      print "Options file not found (expected '%s')" % tmp
43    else:
44      print "Options file is", options_file
45    
46    # Load options file and command-line arguments
47  opts = Options(options_file, ARGUMENTS)  opts = Options(options_file, ARGUMENTS)
48    
49    ############ Load build options ################################
50    
51  opts.AddOptions(  opts.AddOptions(
52  # Where to install esys stuff  # Where to install esys stuff
53    ('incinstall', 'where the esys headers will be installed', Dir('#.').abspath+'/include'),    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),
54    ('libinstall', 'where the esys libraries will be installed', Dir('#.').abspath+'/lib'),    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),
55    ('pyinstall', 'where the esys python modules will be installed', Dir('#.').abspath),    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),
56    ('src_zipfile', 'the source zip file will be installed.', Dir('#.').abspath+"/release/escript_src.zip"),    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),
57    ('test_zipfile', 'the test zip file will be installed.', Dir('#.').abspath+"/release/escript_tests.zip"),    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),
   ('src_tarfile', 'the source tar file will be installed.', Dir('#.').abspath+"/release/escript_src.tar.gz"),  
   ('test_tarfile', 'the test tar file will be installed.', Dir('#.').abspath+"/release/escript_tests.tar.gz"),  
   ('examples_tarfile', 'the examples tar file will be installed.', Dir('#.').abspath+"/release/doc/escript_examples.tar.gz"),  
   ('examples_zipfile', 'the examples zip file will be installed.', Dir('#.').abspath+"/release/doc/escript_examples.zip"),  
   ('guide_pdf', 'name of the user guide in pdf format', Dir('#.').abspath+"/release/doc/user/guide.pdf"),  
   ('api_epydoc', 'name of the epydoc api docs directory',Dir('#.').abspath+"/release/doc/epydoc"),  
   ('guide_html', 'name of the directory for user guide in html format', Dir('#.').abspath+"/release/doc/user/html"),  
58  # Compilation options  # Compilation options
59    BoolOption('dodebug', 'Do you want a debug build?', 'no'),    BoolOption('dodebug', 'For backwards compatibility', 'no'),
60    ('options_file', "Optional file containing preferred options. Ignored if it doesn't exist (default: scons/hostname_options.py)", options_file),    BoolOption('usedebug', 'Do you want a debug build?', 'no'),
61    ('cc_defines','C/C++ defines to use', None),    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),
62    ('cc_flags','C compiler flags to use (Release build)', '-O3 -std=c99 -ffast-math -fpic -Wno-unknown-pragmas'),    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),
63    ('cc_flags_debug', 'C compiler flags to use (Debug build)', '-g -O0 -ffast-math -std=c99 -fpic -Wno-unknown-pragmas'),    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),
64    ('cxx_flags', 'C++ compiler flags to use (Release build)', '--no-warn -ansi'),    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below
65    ('cxx_flags_debug', 'C++ compiler flags to use (Debug build)', '--no-warn -ansi -DDOASSERT -DDOPROF'),    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),
66    ('cc_flags_MPI','C compiler flags to use (Release MPI build)', '-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -fno-alias -c99 -w1 -fpic -wd161'),    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),
67    ('cc_flags_debug_MPI', 'C compiler flags to use (Debug MPI build)', '-g -O0 -c99 -w1 -fpic -wd161'),    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),
68    ('cxx_flags_MPI', 'C++ compiler flags to use (Release MPI build)', '-ansi -wd1563 -wd161'),    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),
69    ('cxx_flags_debug_MPI', 'C++ compiler flags to use (Debug MPI build)', '-ansi -DDOASSERT -DDOPROF -wd1563 -wd161'),    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),
70    ('ar_flags', 'Static library archiver flags to use', None),    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),
71    ('sys_libs', 'System libraries to link with', None),    ('cc_extra', 'Extra C/C++ flags', ''),
72    ('tar_flags','flags for zip files','-c -z'),    ('ld_extra', 'Extra linker flags', ''),
73  # MKL    ('sys_libs', 'System libraries to link with', []),
74    PathOption('mkl_path', 'Path to MKL includes', None),    ('ar_flags', 'Static library archiver flags to use', ''),
75    PathOption('mkl_lib_path', 'Path to MKL libs', None),    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),
76    ('mkl_libs', 'MKL libraries to link with', None),    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),
77  # SCSL    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),
   PathOption('scsl_path', 'Path to SCSL includes', None),  
   PathOption('scsl_lib_path', 'Path to SCSL libs', None),  
   ('scsl_libs', 'SCSL libraries to link with', None),  
   ('scsl_libs_MPI', 'SCSL libraries to link with for MPI build', None),  
 # UMFPACK  
   PathOption('ufc_path', 'Path to UFconfig includes', ufc_path_default),  
   PathOption('umf_path', 'Path to UMFPACK includes', umf_path_default),  
   PathOption('umf_lib_path', 'Path to UMFPACK libs', umf_lib_path_default),  
   ('umf_libs', 'UMFPACK libraries to link with', umf_libs_default),  
 # AMD (used by UMFPACK)  
   PathOption('amd_path', 'Path to AMD includes', amd_path_default),  
   PathOption('amd_lib_path', 'Path to AMD libs', amd_lib_path_default),  
   ('amd_libs', 'AMD libraries to link with', amd_libs_default),  
 # BLAS  
   PathOption('blas_path', 'Path to BLAS includes', None),  
   PathOption('blas_lib_path', 'Path to BLAS libs', None),  
   ('blas_libs', 'BLAS libraries to link with', None),  
 # netCDF  
   ('useNetCDF', 'switch on/off the usage of netCDF', 'yes'),  
   PathOption('netCDF_path', 'Path to netCDF includes', '/usr/local/include'),  
   PathOption('netCDF_lib_path', 'Path to netCDF libs', '/usr/local/lib'),  
   ('netCDF_libs_cxx', 'netCDF C++ libraries to link with', [ 'netcdf_c++', 'netcdf'] ),  
78  # Python  # Python
79  # locations of include files for python    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),
80    PathOption('python_path', 'Path to Python includes', '/usr/include/python%s.%s'%(sys.version_info[0],sys.version_info[1])),    ('python_lib_path', 'Path to Python libs', usr_lib),
81    PathOption('python_lib_path', 'Path to Python libs', '/usr/lib'),    ('python_libs', 'Python libraries to link with', [python_version]),
82    ('python_lib', 'Python libraries to link with', ["python%s.%s"%(sys.version_info[0],sys.version_info[1]),]),    ('python_cmd', 'Python command', 'python'),
83  # Boost  # Boost
84    PathOption('boost_path', 'Path to Boost includes', '/usr/include'),    ('boost_path', 'Path to Boost includes', '/usr/include'),
85    PathOption('boost_lib_path', 'Path to Boost libs', '/usr/lib'),    ('boost_lib_path', 'Path to Boost libs', usr_lib),
86    ('boost_lib', 'Boost libraries to link with', ['boost_python',]),    ('boost_libs', 'Boost libraries to link with', ['boost_python']),
87  # Doc building  # NetCDF
88  #  PathOption('doxygen_path', 'Path to Doxygen executable', None),    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),
89  #  PathOption('epydoc_path', 'Path to Epydoc executable', None),    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),
90  # PAPI    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),
91    PathOption('papi_path', 'Path to PAPI includes', None),    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),
   PathOption('papi_lib_path', 'Path to PAPI libs', None),  
   ('papi_libs', 'PAPI libraries to link with', None),  
92  # MPI  # MPI
93    BoolOption('useMPI', 'Compile parallel version using MPI', 'no'),    BoolOption('useMPI', 'For backwards compatibility', 'no'),
94      BoolOption('usempi', 'Compile parallel version using MPI', 'no'),
95      ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),
96      ('mpi_path', 'Path to MPI includes', '/usr/include'),
97      ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),
98      ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),
99      ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),
100    # ParMETIS
101      BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),
102      ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),
103      ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),
104      ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),
105    # PAPI
106      BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),
107      ('papi_path', 'Path to PAPI includes', '/usr/include'),
108      ('papi_lib_path', 'Path to PAPI libs', usr_lib),
109      ('papi_libs', 'PAPI libraries to link with', ['papi']),
110      BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),
111    # MKL
112      BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),
113      ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),
114      ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),
115      ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),
116    # UMFPACK
117      BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),
118      ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),
119      ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),
120      ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),
121      ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),
122    # Silo
123      BoolOption('usesilo', 'switch on/off the usage of Silo', 'yes'),
124      ('silo_path', 'Path to Silo includes', '/usr/include'),
125      ('silo_lib_path', 'Path to Silo libs', usr_lib),
126      ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
127    # AMD (used by UMFPACK)
128      ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),
129      ('amd_lib_path', 'Path to AMD libs', usr_lib),
130      ('amd_libs', 'AMD libraries to link with', ['amd']),
131    # BLAS (used by UMFPACK)
132      ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),
133      ('blas_lib_path', 'Path to BLAS libs', usr_lib),
134      ('blas_libs', 'BLAS libraries to link with', ['blas']),
135    # An option for specifying the compiler tools set (see windows branch).
136      ('tools_names', 'allow control over the tools in the env setup', ['intelc']),
137    # finer control over library building, intel aggressive global optimisation
138    # works with dynamic libraries on windows.
139      ('share_esysUtils', 'control static or dynamic esysUtils lib', False),
140      ('share_paso', 'control static or dynamic paso lib', False)
141  )  )
142    
143  # Initialise Scons Build Environment  ############ Specify which compilers to use ####################
 # check for user environment variables we are interested in  
 try:  
    python_path = os.environ['PYTHONPATH']  
 except KeyError:  
    python_path = ''  
 try:  
    path = os.environ['PATH']  
 except KeyError:  
    path = ''  
 try:  
    ld_library_path = os.environ['LD_LIBRARY_PATH']  
 except KeyError:  
    ld_library_path = ''  
   
 # Note: On the Altix the intel compilers are not automatically  
 # detected by scons intelc.py script. The Altix has a different directory  
 # path and in some locations the "modules" facility is used to support  
 # multiple compiler versions. This forces the need to import the users PATH  
 # environment which isn't the "scons way"  
 # This doesn't impact linux and windows which will use the default compiler (g++ or msvc, or the intel compiler if it is installed on both platforms)  
 # FIXME: Perhaps a modification to intelc.py will allow better support for ia64 on altix  
   
 if os.name != "nt" and os.uname()[4]=='ia64':  
    env = Environment(ENV = {'PATH':path}, tools = ['default', 'intelc'], options = opts)  
    env['ENV']['PATH'] = path  
    env['ENV']['LD_LIBRARY_PATH'] = ld_library_path  
    env['ENV']['PYTHONPATH'] = python_path  
    if env['CXX'] == 'icpc':  
       env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not). FIXME: this behaviour could be directly incorporated into scons intelc.py  
 elif os.name == "nt":  
    env = Environment(tools = ['default', 'intelc'], options = opts)  
    env['ENV']['PYTHONPATH'] = python_path  
 else:  
    env = Environment(tools = ['default'], options = opts)  
    env['ENV']['PATH'] = path  
    env['ENV']['LD_LIBRARY_PATH'] = ld_library_path  
    env['ENV']['PYTHONPATH'] = python_path  
144    
145  # Setup help for options  # intelc uses regular expressions improperly and emits a warning about
146    # failing to find the compilers.  This warning can be safely ignored.
147    
148    if IS_WINDOWS_PLATFORM:
149          env = Environment(options = opts)
150          env = Environment(tools = ['default'] + env['tools_names'],
151                            options = opts)
152    else:
153       if socket.gethostname().split('.')[0] == 'service0':
154          env = Environment(tools = ['default', 'intelc'], options = opts)
155       elif os.uname()[4]=='ia64':
156          env = Environment(tools = ['default', 'intelc'], options = opts)
157          if env['CXX'] == 'icpc':
158             env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)
159       else:
160          env = Environment(tools = ['default'], options = opts)
161  Help(opts.GenerateHelpText(env))  Help(opts.GenerateHelpText(env))
162    
163  # Add some customer builders  ############ Fill in compiler options if not set above #########
 py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  
 env.Append(BUILDERS = {'PyCompile' : py_builder});  
164    
165  if env['PLATFORM'] == "win32":  # Backwards compatibility: allow dodebug=yes and useMPI=yes
166     runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix='.exe', single_source=True)  if env['dodebug']: env['usedebug'] = 1
167  else:  if env['useMPI']: env['usempi'] = 1
    runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', single_source=True)  
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
168    
169  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  # Default compiler options (override allowed in hostname_options.py, but should not be necessary)
170  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  # For both C and C++ you get: cc_flags and either the optim flags or debug flags
171    
172  # Convert the options which are held in environment variable into python variables for ease of handling and configure compilation options  sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.
 try:  
    incinstall = env['incinstall']  
    env.Append(CPPPATH = [incinstall,])  
 except KeyError:  
    incinstall = None  
 try:  
    libinstall = env['libinstall']  
    env.Append(LIBPATH = [libinstall,])  
    env.PrependENVPath('LD_LIBRARY_PATH', libinstall)  
    if env['PLATFORM'] == "win32":  
       env.PrependENVPath('PATH', libinstall)  
       env.PrependENVPath('PATH', env['boost_lib_path'])  
 except KeyError:  
    libinstall = None  
 try:  
    pyinstall = env['pyinstall']+'/esys' # all targets will install into pyinstall/esys but PYTHONPATH points at straight pyinstall so you go import esys.escript etc  
    env.PrependENVPath('PYTHONPATH', env['pyinstall'])  
 except KeyError:  
    pyinstall = None  
 try:  
    dodebug = env['dodebug']  
 except KeyError:  
    dodebug = None  
 try:  
    useMPI = env['useMPI']  
 except KeyError:  
    useMPI = None  
 try:  
    cc_defines = env['cc_defines']  
    env.Append(CPPDEFINES = cc_defines)  
 except KeyError:  
    pass  
   
 if 'shake71' == socket.gethostname().split('.')[0]:  
   if useMPI:  
     env['CC'] = 'mpicc'  
     env['CXX'] = 'mpiCC'  
   
 if dodebug:  
   if useMPI:  
     try:  
       flags = env['cc_flags_debug_MPI']  
       env.Append(CCFLAGS = flags)  
     except KeyError:  
       pass  
   else:  
     try:  
       flags = env['cc_flags_debug']  
       env.Append(CCFLAGS = flags)  
     except KeyError:  
       pass  
 else:  
   if useMPI:  
    try:  
      flags = env['cc_flags_MPI']  
      env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
   else:  
    try:  
       flags = env['cc_flags']  
       env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
 if dodebug:  
    if useMPI:  
      try:  
         flags = env['cxx_flags_debug_MPI']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
    else:  
      try:  
         flags = env['cxx_flags_debug']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 else:  
    if useMPI:  
      try:  
         flags = env['cxx_flags_MPI']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
    else:  
      try:  
         flags = env['cxx_flags']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 try:  
    flags = env['ar_flags']  
    env.Append(ARFLAGS = flags)  
 except KeyError:  
    ar_flags = None  
 try:  
    sys_libs = env['sys_libs']  
 except KeyError:  
    sys_libs = ''  
173    
174  try:  if env["CC"] == "icc":
175     tar_flags = env['tar_flags']    # Intel compilers
176     env.Replace(TARFLAGS = tar_flags)    cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
177  except KeyError:    cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"
178     pass    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
179      omp_optim     = "-openmp -openmp_report0"
180      omp_debug     = "-openmp -openmp_report0"
181      omp_libs      = ['guide', 'pthread']
182      pedantic      = ""
183      fatalwarning      = ""        # Switch to turn warnings into errors
184      sysheaderopt      = ""
185    elif env["CC"] == "gcc":
186      # GNU C on any system
187      cc_flags      = "-pedantic -Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"
188    #the long long warning occurs on the Mac
189      cc_optim      = "-O3"
190      cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
191      omp_optim     = ""
192      omp_debug     = ""
193      omp_libs      = []
194      pedantic      = "-pedantic-errors -Wno-long-long"
195      fatalwarning      = "-Werror"
196      sysheaderopt      = "-isystem "
197    elif env["CC"] == "cl":
198      # Microsoft Visual C on Windows
199      cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"
200      cc_optim      = "/O2 /Op /MT /W3"
201      cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"
202      omp_optim     = ""
203      omp_debug     = ""
204      omp_libs      = []
205      pedantic      = ""
206      fatalwarning      = ""
207      sysheaderopt      = ""
208    elif env["CC"] == "icl":
209      # intel C on Windows, see windows_intelc_options.py for a start
210      pedantic      = ""
211      fatalwarning      = ""
212      sysheaderopt      = ""
213    
 try:  
    includes = env['mkl_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
214    
215  try:  # If not specified in hostname_options.py then set them here
216     lib_path = env['mkl_lib_path']  if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags
217     env.Append(LIBPATH = [lib_path,])  if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim
218  except KeyError:  if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug
219     pass  if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim
220    if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug
221    if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs
222    
223  if useMPI:  # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty
224     mkl_libs = ''  if not env["useopenmp"]:
225  else:    env['omp_optim'] = ""
226     try:    env['omp_debug'] = ""
227        mkl_libs = env['mkl_libs']    env['omp_libs'] = []
    except KeyError:  
       mkl_libs = ''  
228    
229  try:  if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0
    includes = env['scsl_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
230    
231  try:  ############ Copy environment variables into scons env #########
    lib_path = env['scsl_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
232    
233  if useMPI:  try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']
234    try:  except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1
235      scsl_libs = env['scsl_libs_MPI']  
236    except KeyError:  try: env['ENV']['PATH'] = os.environ['PATH']
237      scsl_libs = ''  except KeyError: pass
238  else:  
239    try:  try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
240      scsl_libs = env['scsl_libs']  except KeyError: pass
241    except KeyError:  
242      scsl_libs = ''  try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']
243    except KeyError: pass
244    
245    try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']
246    except KeyError: pass
247    
248    try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']
249    except KeyError: pass
250    
251    try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']
252    except KeyError: pass
253    
254    try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']
255    except KeyError: pass
256    
257    try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']
258    except KeyError: pass
259    
260    try: env['ENV']['HOME'] = os.environ['HOME']
261    except KeyError: pass
262    
263    # Configure for test suite
264    env.PrependENVPath('PYTHONPATH', prefix)
265    env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
266    
267    env['ENV']['ESCRIPT_ROOT'] = prefix
268    
269    ############ Set up paths for Configure() ######################
270    
271    # Make a copy of an environment
272    # Use env.Clone if available, but fall back on env.Copy for older version of scons
273    def clone_env(env):
274      if 'Clone' in dir(env): return env.Clone()    # scons-0.98
275      else:                   return env.Copy() # scons-0.96
276    
277    # Add cc option -I<Escript>/trunk/include
278    env.Append(CPPPATH      = [Dir('include')])
279    
280    # Add cc option -L<Escript>/trunk/lib
281    env.Append(LIBPATH      = [Dir(env['libinstall'])])
282    
283    if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])
284    if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])
285    
286    if env['usepedantic']: env.Append(CCFLAGS = pedantic)
287    
288    # MS Windows
289    if IS_WINDOWS_PLATFORM:
290      env.PrependENVPath('PATH',    [env['boost_lib_path']])
291      env.PrependENVPath('PATH',    [env['libinstall']])
292      if not env['share_esysUtils'] :
293        env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
294      if not env['share_paso'] :
295        env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
296    
297      if env['usenetcdf']:
298        env.PrependENVPath('PATH',  [env['netCDF_lib_path']])
299    
300    env.Append(ARFLAGS = env['ar_flags'])
301    
302    # Get the global Subversion revision number for getVersion() method
303  try:  try:
304     includes = env['umf_path']     global_revision = os.popen("svnversion -n .").read()
305     env.Append(CPPPATH = [includes,])     global_revision = re.sub(":.*", "", global_revision)
306  except KeyError:     global_revision = re.sub("[^0-9]", "", global_revision)
307     pass  except:
308       global_revision="-1"
309    if global_revision == "": global_revision="-2"
310    env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])
311    
312    ############ numarray (required) ###############################
313    
314  try:  try:
315     lib_path = env['umf_lib_path']    from numarray import identity
316     env.Append(LIBPATH = [lib_path,])  except ImportError:
317  except KeyError:    print "Cannot import numarray, you need to set your PYTHONPATH"
318     pass    sys.exit(1)
319    
320  if useMPI:  ############ C compiler (required) #############################
321      umf_libs = ''  
322    # Create a Configure() environment for checking existence of required libraries and headers
323    conf = Configure(clone_env(env))
324    
325    # Test that the compiler is working
326    if not conf.CheckFunc('printf'):
327      print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])
328      sys.exit(1)
329    
330    if conf.CheckFunc('gethostname'):
331      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
332    
333    ############ python libraries (required) #######################
334    
335    
336    if not sysheaderopt =="":
337      conf.env.Append(CCFLAGS=sysheaderopt+env['python_path'])
338  else:  else:
339     try:    conf.env.AppendUnique(CPPPATH     = [env['python_path']])
       umf_libs = env['umf_libs']  
    except KeyError:  
       umf_libs = ''  
340    
341  try:  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])
342     includes = env['ufc_path']  conf.env.AppendUnique(LIBS      = [env['python_libs']])
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
343    
344  try:  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs
    includes = env['amd_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
345    
346  try:  if not conf.CheckCHeader('Python.h'):
347     lib_path = env['amd_lib_path']    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])
348     env.Append(LIBPATH = [lib_path,])    sys.exit(1)
349  except KeyError:  if not conf.CheckFunc('Py_Main'):
350     pass    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])
351      sys.exit(1)
352    
353  if useMPI:  ############ boost (required) ##################################
354      amd_libs = ''  
355    if not sysheaderopt =="":
356      conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path']+'boost')
357  else:  else:
358     try:    conf.env.AppendUnique(CPPPATH     = [env['boost_path']])
       amd_libs = env['amd_libs']  
    except KeyError:  
       amd_libs = ''  
359    
360  try:  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])
361     includes = env['blas_path']  conf.env.AppendUnique(LIBS      = [env['boost_libs']])
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
362    
363  try:  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs
    lib_path = env['blas_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
364    
365  try:  if not conf.CheckCXXHeader('boost/python.hpp'):
366     blas_libs = env['blas_libs']    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])
367  except KeyError:    sys.exit(1)
368     blas_libs = ''  if not conf.CheckFunc('PyObject_SetAttr'):
369      print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])
370      sys.exit(1)
371    
372  try:  # Commit changes to environment
373     useNetCDF = env['useNetCDF']  env = conf.Finish()
 except KeyError:  
    useNetCDF = 'yes'  
    pass  
   
 if not useNetCDF == 'yes':  
    print "Warning: Installation is not configured with netCDF. Some I/O function may not be available."  
     
 if useNetCDF == 'yes':  
    try:  
       includes = env['netCDF_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
374    
375     try:  ############ VTK (optional) ####################################
       lib_path = env['netCDF_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
376    
377     try:  if env['usevtk']:
378        netCDF_libs_cxx = env['netCDF_libs_cxx']    try:
379     except KeyError:      import vtk
380        netCDF_libs_cxx = [ ]      env['usevtk'] = 1
381  else:    except ImportError:
382     netCDF_libs_cxx=[ ]      env['usevtk'] = 0
383    
384    # Add VTK to environment env if it was found
385    if env['usevtk']:
386      env.Append(CPPDEFINES = ['USE_VTK'])
387    
388    ############ NetCDF (optional) #################################
389    
390    conf = Configure(clone_env(env))
391    
392    if env['usenetcdf']:
393      conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])
394      conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])
395      conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])
396      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs
397    
398    if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0
399    if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0
400    
401    # Add NetCDF to environment env if it was found
402    if env['usenetcdf']:
403      env = conf.Finish()
404      env.Append(CPPDEFINES = ['USE_NETCDF'])
405    else:
406      conf.Finish()
407    
408    ############ PAPI (optional) ###################################
409    
410    # Start a new configure environment that reflects what we've already found
411    conf = Configure(clone_env(env))
412    
413    if env['usepapi']:
414      conf.env.AppendUnique(CPPPATH = [env['papi_path']])
415      conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])
416      conf.env.AppendUnique(LIBS    = [env['papi_libs']])
417      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs
418    
419    if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0
420    if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0
421    
422    # Add PAPI to environment env if it was found
423    if env['usepapi']:
424      env = conf.Finish()
425      env.Append(CPPDEFINES = ['BLOCKPAPI'])
426    else:
427      conf.Finish()
428    
429    ############ MKL (optional) ####################################
430    
431    # Start a new configure environment that reflects what we've already found
432    conf = Configure(clone_env(env))
433    
434    if env['usemkl']:
435      conf.env.AppendUnique(CPPPATH = [env['mkl_path']])
436      conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])
437      conf.env.AppendUnique(LIBS    = [env['mkl_libs']])
438      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs
439    
440    if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0
441    if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0
442    
443    # Add MKL to environment env if it was found
444    if env['usemkl']:
445      env = conf.Finish()
446      env.Append(CPPDEFINES = ['MKL'])
447    else:
448      conf.Finish()
449    
450    ############ UMFPACK (optional) ################################
451    
452    # Start a new configure environment that reflects what we've already found
453    conf = Configure(clone_env(env))
454    
455    if env['useumfpack']:
456      conf.env.AppendUnique(CPPPATH = [env['ufc_path']])
457      conf.env.AppendUnique(CPPPATH = [env['umf_path']])
458      conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])
459      conf.env.AppendUnique(LIBS    = [env['umf_libs']])
460      conf.env.AppendUnique(CPPPATH = [env['amd_path']])
461      conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])
462      conf.env.AppendUnique(LIBS    = [env['amd_libs']])
463      conf.env.AppendUnique(CPPPATH = [env['blas_path']])
464      conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])
465      conf.env.AppendUnique(LIBS    = [env['blas_libs']])
466      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs
467      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs
468      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs
469    
470    if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0
471    if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0
472    if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?
473    
474    # Add UMFPACK to environment env if it was found
475    if env['useumfpack']:
476      env = conf.Finish()
477      env.Append(CPPDEFINES = ['UMFPACK'])
478    else:
479      conf.Finish()
480    
481    ############ Silo (optional) ###################################
482    
483    if env['usesilo']:
484      conf = Configure(clone_env(env))
485      conf.env.AppendUnique(CPPPATH = [env['silo_path']])
486      conf.env.AppendUnique(LIBPATH = [env['silo_lib_path']])
487      conf.env.AppendUnique(LIBS = [env['silo_libs']])
488      if not conf.CheckCHeader('silo.h'): env['usesilo'] = 0
489      if not conf.CheckFunc('DBMkDir'): env['usesilo'] = 0
490      conf.Finish()
491    
492    # Add the path to Silo to environment env if it was found.
493    # Note that we do not add the libs since they are only needed for the
494    # escriptreader library and tools.
495    if env['usesilo']:
496      env.AppendUnique(CPPPATH = [env['silo_path']])
497      env.AppendUnique(LIBPATH = [env['silo_lib_path']])
498      env.Append(CPPDEFINES = ['HAVE_SILO'])
499    
500    ############ Add the compiler flags ############################
501    
502    # Enable debug by choosing either cc_debug or cc_optim
503    if env['usedebug']:
504      env.Append(CCFLAGS        = env['cc_debug'])
505      env.Append(CCFLAGS        = env['omp_debug'])
506    else:
507      env.Append(CCFLAGS        = env['cc_optim'])
508      env.Append(CCFLAGS        = env['omp_optim'])
509    
510    # Always use cc_flags
511    env.Append(CCFLAGS      = env['cc_flags'])
512    env.Append(LIBS         = [env['omp_libs']])
513    
 try:  
    includes = env['boost_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['boost_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    boost_lib = env['boost_lib']  
 except KeyError:  
    boost_lib = None  
 try:  
    includes = env['python_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['python_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    python_lib = env['python_lib']  
 except KeyError:  
    python_lib = None  
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
514    
515    ############ Add some custom builders ##########################
516    
517  try:  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
518     src_zipfile = env.File(env['src_zipfile'])  env.Append(BUILDERS = {'PyCompile' : py_builder});
 except KeyError:  
    src_zipfile = None  
 try:  
    test_zipfile = env.File(env['test_zipfile'])  
 except KeyError:  
    test_zipfile = None  
 try:  
    examples_zipfile = env.File(env['examples_zipfile'])  
 except KeyError:  
    examples_zipfile = None  
519    
520  try:  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
521     src_tarfile = env.File(env['src_tarfile'])  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
 except KeyError:  
    src_tarfile = None  
 try:  
    test_tarfile = env.File(env['test_tarfile'])  
 except KeyError:  
    test_tarfile = None  
 try:  
    examples_tarfile = env.File(env['examples_tarfile'])  
 except KeyError:  
    examples_tarfile = None  
522    
523  try:  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
524     guide_pdf = env.File(env['guide_pdf'])  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
 except KeyError:  
    guide_pdf = None  
525    
526  try:  ############ MPI (optional) ####################################
527     guide_html_index = env.File('index.htm',env['guide_html'])  
528  except KeyError:  # Create a modified environment for MPI programs (identical to env if usempi=no)
529     guide_html_index = None  env_mpi = clone_env(env)
530    
531    # Start a new configure environment that reflects what we've already found
532    conf = Configure(clone_env(env_mpi))
533    
534    if env_mpi['usempi']:
535      conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])
536      conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])
537      conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])
538      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs
539    
540    if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0
541    if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0
542    
543    # Add MPI to environment env_mpi if it was found
544    if env_mpi['usempi']:
545      env_mpi = conf.Finish()
546      env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])
547    else:
548      conf.Finish()
549    
550    env['usempi'] = env_mpi['usempi']
551    
552    ############ ParMETIS (optional) ###############################
553    
554    # Start a new configure environment that reflects what we've already found
555    conf = Configure(clone_env(env_mpi))
556    
557    if not env_mpi['usempi']: env_mpi['useparmetis'] = 0
558    
559    if env_mpi['useparmetis']:
560      conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])
561      conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])
562      conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])
563      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs
564    
565    if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0
566    if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0
567    
568    # Add ParMETIS to environment env_mpi if it was found
569    if env_mpi['useparmetis']:
570      env_mpi = conf.Finish()
571      env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])
572    else:
573      conf.Finish()
574    
575    env['useparmetis'] = env_mpi['useparmetis']
576    
577    ############ Now we switch on Warnings as errors ###############
578    
579    #this needs to be done after configuration because the scons test files have warnings in them
580    
581    if ((fatalwarning != "") and (env['usewarnings'])):
582      env.Append(CCFLAGS        = fatalwarning)
583      env_mpi.Append(CCFLAGS        = fatalwarning)
584    
585    ############ Summarize our environment #########################
586    
587    print ""
588    print "Summary of configuration (see ./config.log for information)"
589    print " Using python libraries"
590    print " Using numarray"
591    print " Using boost"
592    if env['usenetcdf']: print "    Using NetCDF"
593    else: print "   Not using NetCDF"
594    if env['usevtk']: print "   Using VTK"
595    else: print "   Not using VTK"
596    if env['usemkl']: print "   Using MKL"
597    else: print "   Not using MKL"
598    if env['useumfpack']: print "   Using UMFPACK"
599    else: print "   Not using UMFPACK"
600    if env['usesilo']: print "  Using Silo"
601    else: print "   Not using Silo"
602    if env['useopenmp']: print "    Using OpenMP"
603    else: print "   Not using OpenMP"
604    if env['usempi']: print "   Using MPI"
605    else: print "   Not using MPI"
606    if env['useparmetis']: print "  Using ParMETIS"
607    else: print "   Not using ParMETIS (requires MPI)"
608    if env['usepapi']: print "  Using PAPI"
609    else: print "   Not using PAPI"
610    if env['usedebug']: print " Compiling for debug"
611    else: print "   Not compiling for debug"
612    print " Installing in", prefix
613    if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"
614    else: print "   Not treating warnings as errors"
615    print ""
616    
617    ############ Delete option-dependent files #####################
618    
619    Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))
620    Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))
621    Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))
622    if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))
623    
624    
625    ############ Build the subdirectories ##########################
626    
627    from grouptest import *
628    
629    TestGroups=[]
630    
631    Export(
632      ["env",
633       "env_mpi",
634       "clone_env",
635       "IS_WINDOWS_PLATFORM",
636       "TestGroups"
637       ]
638      )
639    
 try:  
    api_epydoc = env.Dir(env['api_epydoc'])  
 except KeyError:  
    api_epydoc = None  
   
 # Zipgets  
   
 env.Default(libinstall)  
 env.Default(incinstall)  
 env.Default(pyinstall)  
 env.Alias('release_src',[ src_zipfile, src_tarfile ])  
 env.Alias('release_tests',[ test_zipfile, test_tarfile])  
 env.Alias('release_examples',[ examples_zipfile, examples_tarfile])  
 env.Alias('api_epydoc',api_epydoc)  
 env.Alias('guide_pdf', guide_pdf)  
 env.Alias('docs',[ 'release_examples', 'guide_pdf', guide_html_index, api_epydoc])  
 env.Alias('release', ['release_src', 'release_tests', 'docs'])  
 env.Alias('build_tests')    # target to build all C++ tests  
 env.Alias('build_py_tests') # target to build all python tests  
 env.Alias('build_all_tests', [ 'build_tests', 'build_py_tests' ] ) # target to build all python tests  
 env.Alias('run_tests', 'build_tests')   # target to run all C++ test  
 env.Alias('py_tests', 'build_py_tests') # taget to run all released python tests  
 env.Alias('all_tests', ['run_tests', 'py_tests']) # target to run all C++ and released python tests  
   
 # Python install - esys __init__.py  
 init_target = env.Command(pyinstall+'/__init__.py', None, Touch('$TARGET'))  
 env.Alias(init_target)  
   
 # Allow sconscripts to see the env  
 Export(["env", "incinstall", "libinstall", "pyinstall", "dodebug", "mkl_libs", "scsl_libs", "umf_libs", "amd_libs", "blas_libs", "netCDF_libs_cxx", "useNetCDF",  
     "boost_lib", "python_lib", "doxygen_path", "epydoc_path", "papi_libs",  
         "sys_libs", "test_zipfile", "src_zipfile", "test_tarfile", "src_tarfile", "examples_tarfile", "examples_zipfile",  
         "guide_pdf", "guide_html_index", "api_epydoc", "useMPI"])  
   
 # End initialisation section  
 # Begin configuration section  
 # adds this file and the scons option directore to the source tar  
 release_srcfiles=[env.File('SConstruct'),]+[ env.File(x) for x in glob.glob('scons/*.py') ]  
 release_testfiles=[env.File('README_TESTS'),]  
 env.Zip(src_zipfile, release_srcfiles)  
 env.Zip(test_zipfile, release_testfiles)  
 env.Tar(src_tarfile, release_srcfiles)  
 env.Tar(test_tarfile, release_testfiles)  
   
 # Insert new components to be build here  
 # FIXME: might be nice to replace this verbosity with a list of targets and some  
 # FIXME: nifty python to create the lengthy but very similar env.Sconscript lines  
 # Third Party libraries  
640  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)
641  # C/C++ Libraries  env.SConscript(dirs = ['tools/libescriptreader/src'], build_dir='build/$PLATFORM/tools/libescriptreader', duplicate=0)
642  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)
 # bruce is removed for now as it doesn't really do anything  
 # env.SConscript(dirs = ['bruce/src'], build_dir='build/$PLATFORM/bruce', duplicate=0)  
643  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)
644  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)
645  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)
# Line 586  env.SConscript(dirs = ['modellib/py_src' Line 647  env.SConscript(dirs = ['modellib/py_src'
647  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)
648  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)
649  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)
   
 # added by Ben Cumming  
650  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)
651  #env.SConscript(dirs = ['../test'], build_dir='../test/build', duplicate=0)  env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)
652    env.SConscript(dirs = ['paso/profiling'], build_dir='build/$PLATFORM/paso/profiling', duplicate=0)
653    
654    
655    ############ Remember what optimizations we used ###############
656    
657    remember_list = []
658    
659    if env['usedebug']:
660      remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))
661    
662    if env['usempi']:
663      remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))
664    
665    if env['omp_optim'] != '':
666      remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))
667    
668    env.Alias('remember_options', remember_list)
669    
670    ############ Targets to build and install libraries ############
671    
672    target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))
673    env.Alias('target_init', [target_init])
674    
675    # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>
676    env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])
677    env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])
678    
679    env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])
680    env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])
681    
682    env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])
683    env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])
684    
685    env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])
686    env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])
687    
688    # Now gather all the above into a couple easy targets: build_all and install_all
689    build_all_list = []
690    build_all_list += ['build_esysUtils']
691    build_all_list += ['build_paso']
692    build_all_list += ['build_escript']
693    build_all_list += ['build_finley']
694    if env['usempi']:       build_all_list += ['target_pythonMPI_exe']
695    if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']
696    if env['usesilo']:  build_all_list += ['target_escript2silo']
697    env.Alias('build_all', build_all_list)
698    
699    install_all_list = []
700    install_all_list += ['target_init']
701    install_all_list += ['install_esysUtils']
702    install_all_list += ['install_paso']
703    install_all_list += ['install_escript']
704    install_all_list += ['install_finley']
705    install_all_list += ['target_install_pyvisi_py']
706    install_all_list += ['target_install_modellib_py']
707    install_all_list += ['target_install_pycad_py']
708    if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']
709    if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']
710    if env['usesilo']:  install_all_list += ['target_install_escript2silo']
711    install_all_list += ['remember_options']
712    env.Alias('install_all', install_all_list)
713    
714    # Default target is install
715    env.Default('install_all')
716    
717    ############ Targets to build and run the test suite ###########
718    
719    env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])
720    env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])
721    env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])
722    env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])
723    
724    ############ Targets to build the documentation ################
725    
726    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])
727    
728    if not IS_WINDOWS_PLATFORM:
729       try:
730        utest=open("utest.sh","w")
731        utest.write(makeHeader())
732        for tests in TestGroups:
733            utest.write(tests.makeString())
734        utest.close()
735        print "utest.sh written"
736       except IOError:
737        print "Error attempting to write unittests file."
738        sys.exit(1)
739    

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