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revision 2729 by jfenwick, Thu Oct 22 01:45:28 2009 UTC revision 2924 by trankine, Thu Feb 4 05:30:53 2010 UTC
# Line 1  Line 1 
1    
2  ########################################################  ########################################################
3  #  #
4  # Copyright (c) 2003-2009 by University of Queensland  # Copyright (c) 2003-2010 by University of Queensland
5  # Earth Systems Science Computational Center (ESSCC)  # Earth Systems Science Computational Center (ESSCC)
6  # http://www.uq.edu.au/esscc  # http://www.uq.edu.au/esscc
7  #  #
# Line 86  adder( Line 86  adder(
86    BoolVariable('usedebug', 'Do you want a debug build?', 'no'),    BoolVariable('usedebug', 'Do you want a debug build?', 'no'),
87    BoolVariable('usevtk', 'Do you want to use VTK?', 'yes'),    BoolVariable('usevtk', 'Do you want to use VTK?', 'yes'),
88    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),
89      ('cc', 'path to C compiler', 'DEFAULT'),
90      ('cxx', 'path to C++ compiler', 'DEFAULT'),
91    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),
92    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below
93    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),
# Line 161  adder( Line 163  adder(
163    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),
164    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('blas_lib_path', 'Path to BLAS libs', usr_lib),
165    ('blas_libs', 'BLAS libraries to link with', ['blas']),    ('blas_libs', 'BLAS libraries to link with', ['blas']),
166    #Lapack options
167      BoolVariable('uselapack','switch on/off use of Lapack','no'),
168      ('lapack_path', 'Path to Lapack includes','/usr/include'),
169      ('lapack_lib_path', 'Path to Lapack libs', usr_lib),
170      ('lapack_libs', 'Lapack libraries to link with', []),
171      ('lapack_type', '{clapack,mkl}','clapack'),
172  # An option for specifying the compiler tools set (see windows branch).  # An option for specifying the compiler tools set (see windows branch).
173    ('tools_names', 'allow control over the tools in the env setup', ['intelc']),    ('tools_names', 'allow control over the tools in the env setup', ['intelc']),
174  # finer control over library building, intel aggressive global optimisation  # finer control over library building, intel aggressive global optimisation
175  # works with dynamic libraries on windows.  # works with dynamic libraries on windows.
176    ('share_esysUtils', 'control static or dynamic esysUtils lib', False),    ('share_esysUtils', 'control static or dynamic esysUtils lib', False),
177    ('share_paso', 'control static or dynamic paso lib', False),    ('share_paso', 'control static or dynamic paso lib', False),
178    ('env_export','Environment variables to be passed to children',[])    ('env_export','Environment variables to be passed to children',[]),
179    #To enable passing function pointers through python
180      BoolVariable('iknowwhatimdoing','allow nonstandard C',False)
181  )  )
182    
183    
# Line 190  else: Line 200  else:
200           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)
201     else:     else:
202        env = Environment(tools = ['default'], options = opts)        env = Environment(tools = ['default'], options = opts)
 Help(opts.GenerateHelpText(env))  
203    
204    # Override compiler choice if provided
205    if env['cc'] != 'DEFAULT': env['CC']=env['cc']
206    if env['cxx'] != 'DEFAULT': env['CXX']=env['cxx']
207    
208    Help(opts.GenerateHelpText(env))
209    
210  ############ Make sure target directories exist ################  ############ Make sure target directories exist ################
211    
# Line 218  if env['useMPI']: env['usempi'] = 1 Line 232  if env['useMPI']: env['usempi'] = 1
232    
233  sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.  sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.
234    
235    cc_flags = ""
236    cc_optim = ""
237    cc_debug = ""
238    omp_optim = ""
239    omp_debug = ""
240    omp_libs = []
241    
242  if env["CC"] == "icc":  if env["CC"] == "icc":
243    # Intel compilers    # Intel compilers
244    cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"    cc_flags      = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
245    cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"    cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"
246    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
247    omp_optim     = "-openmp -openmp_report0"    omp_optim     = "-openmp -openmp_report0"
# Line 229  if env["CC"] == "icc": Line 250  if env["CC"] == "icc":
250    pedantic      = ""    pedantic      = ""
251    fatalwarning      = ""        # Switch to turn warnings into errors    fatalwarning      = ""        # Switch to turn warnings into errors
252    sysheaderopt      = ""    sysheaderopt      = ""
253  elif env["CC"] == "gcc":  elif env["CC"][:3] == "gcc":
254    # GNU C on any system    # GNU C on any system
255    cc_flags      = "-pedantic -Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"    cc_flags      = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"
256  #the long long warning occurs on the Mac  #the long long warning occurs on the Mac
257    cc_optim      = "-O3"    cc_optim      = "-O3"
258    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
# Line 285  if env['forcecollres']    != "leave_alon Line 306  if env['forcecollres']    != "leave_alon
306      env.Append(CPPDEFINES=['FRESCOLLECTOFF'])      env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
307    
308    
309    if env['iknowwhatimdoing']:
310        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
311    
312  # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty
313  if not env["useopenmp"]:  if not env["useopenmp"]:
314    env['omp_optim'] = ""    env['omp_optim'] = ""
# Line 455  conf.env.PrependENVPath(LD_LIBRARY_PATH_ Line 479  conf.env.PrependENVPath(LD_LIBRARY_PATH_
479  conf.env.PrependENVPath('PYTHONPATH', prefix)  conf.env.PrependENVPath('PYTHONPATH', prefix)
480  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])  conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
481    
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
482    
483  if not conf.CheckFunc('PyObject_SetAttr'):  #Yep we still cant figure this one out. - working on it.
484    print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  if not IS_WINDOWS_PLATFORM:
485    sys.exit(1)    if not conf.CheckCXXHeader('boost/python.hpp'):
486        print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])
487        sys.exit(1)
488    
489      if not conf.CheckFunc('PyObject_SetAttr'):
490        print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])
491        sys.exit(1)
492    
493    
494  # Commit changes to environment  # Commit changes to environment
495  env = conf.Finish()  env = conf.Finish()
# Line 543  if env['usemkl']: Line 571  if env['usemkl']:
571  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0
572  if env['usemkl'] and not conf.CheckFunc('pardiso'): env['usemkl'] = 0  if env['usemkl'] and not conf.CheckFunc('pardiso'): env['usemkl'] = 0
573    
574    
575  # Add MKL to environment env if it was found  # Add MKL to environment env if it was found
576  if env['usemkl']:  if env['usemkl']:
577    env = conf.Finish()    env = conf.Finish()
# Line 597  if env['usesilo']: Line 626  if env['usesilo']:
626    
627  # Add the path to Silo to environment env if it was found.  # Add the path to Silo to environment env if it was found.
628  # Note that we do not add the libs since they are only needed for the  # Note that we do not add the libs since they are only needed for the
629  # escriptreader library and tools.  # escriptexport library and tools.
630  if env['usesilo']:  if env['usesilo']:
631    env.AppendUnique(CPPPATH = [env['silo_path']])    env.AppendUnique(CPPPATH = [env['silo_path']])
632    env.AppendUnique(LIBPATH = [env['silo_lib_path']])    env.AppendUnique(LIBPATH = [env['silo_lib_path']])
633    env.Append(CPPDEFINES = ['HAVE_SILO'])  
634    ########### Lapack (optional) ##################################
635    
636    if env['uselapack']:
637        env.AppendUnique(CPPDEFINES='USE_LAPACK')
638        env.AppendUnique(CPPPATH = [env['lapack_path']])
639        env.AppendUnique(LIBPATH =[env['lapack_lib_path']])
640    
641        env.Append(LIBPATH = '/usr/lib/atlas')
642        env.Append(LIBS = [env['lapack_libs']])
643        if env['lapack_type']=='mkl':
644           if not env['usemkl']:
645            env['uselapack']=0
646            print "mkl_lapack requires mkl"
647           else:
648            env.AppendUnique(CPPDEFINES='MKL_LAPACK')
649          
650    
651  ############ Add the compiler flags ############################  ############ Add the compiler flags ############################
652    
# Line 664  else: Line 709  else:
709    
710  env['usempi'] = env_mpi['usempi']  env['usempi'] = env_mpi['usempi']
711    
   
712  ############ ParMETIS (optional) ###############################  ############ ParMETIS (optional) ###############################
713    
714  # Start a new configure environment that reflects what we've already found  # Start a new configure environment that reflects what we've already found
# Line 693  else: Line 737  else:
737    
738  env['useparmetis'] = env_mpi['useparmetis']  env['useparmetis'] = env_mpi['useparmetis']
739    
 ############ Now we switch on Warnings as errors ###############  
   
 #this needs to be done after configuration because the scons test files have warnings in them  
   
 if ((fatalwarning != "") and (env['usewarnings'])):  
   env.Append(CCFLAGS        = fatalwarning)  
   env_mpi.Append(CCFLAGS        = fatalwarning)  
   
740  ############ Summarize our environment #########################  ############ Summarize our environment #########################
741    
742  print ""  print ""
# Line 726  if env['useparmetis']: print " Using Par Line 762  if env['useparmetis']: print " Using Par
762  else: print "   Not using ParMETIS (requires MPI)"  else: print "   Not using ParMETIS (requires MPI)"
763  if env['usepapi']: print "  Using PAPI"  if env['usepapi']: print "  Using PAPI"
764  else: print "   Not using PAPI"  else: print "   Not using PAPI"
765    if env['uselapack']: print "    Using Lapack"
766    else: print "   Not using Lapack"
767  if env['usedebug']: print " Compiling for debug"  if env['usedebug']: print " Compiling for debug"
768  else: print "   Not compiling for debug"  else: print "   Not compiling for debug"
769  print " Installing in", prefix  print " Installing in", prefix
# Line 745  if not env['usempi']: Execute(Delete(os. Line 783  if not env['usempi']: Execute(Delete(os.
783    
784  ############ Build the subdirectories ##########################  ############ Build the subdirectories ##########################
785    
786    if env['usepedantic']: env_mpi.Append(CCFLAGS = pedantic)
787    
788    
789  from grouptest import *  from grouptest import *
790    
791  TestGroups=[]  TestGroups=[]
792    
793    dodgy_env=clone_env(env_mpi)    # Environment without pedantic options
794    
795    ############ Now we switch on Warnings as errors ###############
796    
797    #this needs to be done after configuration because the scons test files have warnings in them
798    
799    if ((fatalwarning != "") and (env['usewarnings'])):
800      env.Append(CCFLAGS        = fatalwarning)
801      env_mpi.Append(CCFLAGS        = fatalwarning)
802    
803    
804  Export(  Export(
805    ["env",    ["env",
806     "env_mpi",     "env_mpi",
807     "clone_env",     "clone_env",
808       "dodgy_env",
809     "IS_WINDOWS_PLATFORM",     "IS_WINDOWS_PLATFORM",
810     "TestGroups"     "TestGroups"
811     ]     ]
812    )    )
813    
814  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)
815  env.SConscript(dirs = ['tools/libescriptreader/src'], build_dir='build/$PLATFORM/tools/libescriptreader', duplicate=0)  env.SConscript(dirs = ['tools/escriptconvert'], build_dir='build/$PLATFORM/tools/escriptconvert', duplicate=0)
816  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)
817    env.SConscript(dirs = ['dataexporter/src'], build_dir='build/$PLATFORM/dataexporter', duplicate=0)
818  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)
819  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)
820  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)
# Line 792  env.Alias('remember_options', remember_l Line 846  env.Alias('remember_options', remember_l
846  ############### Record python interpreter version ##############  ############### Record python interpreter version ##############
847    
848  if not IS_WINDOWS_PLATFORM:  if not IS_WINDOWS_PLATFORM:
849    
850    versionstring="Python "+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])    versionstring="Python "+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])
851      if sys.version_info[4] >0 : versionstring+="rc%s"%sys.version_info[4]
852    os.system("echo "+versionstring+" > "+os.path.join(env['libinstall'],"pyversion"))    os.system("echo "+versionstring+" > "+os.path.join(env['libinstall'],"pyversion"))
853    
854  ############## Populate the buildvars file #####################  ############## Populate the buildvars file #####################
# Line 829  else: Line 885  else:
885      out+="n"      out+="n"
886  buildvars.write(out+"\n")  buildvars.write(out+"\n")
887  buildvars.write("mpi_flavour="+env['mpi_flavour']+'\n')  buildvars.write("mpi_flavour="+env['mpi_flavour']+'\n')
888    out="lapack="
889    if env['uselapack']:
890       out+="y"
891    else:
892       out+="n"
893    out+="\nsilo="
894    if env['usesilo']:
895       out+="y"
896    else:
897       out+="n"
898    buildvars.write(out+"\n")
899  buildvars.close()  buildvars.close()
900    
901    
# Line 845  env.Alias('install_esysUtils', ['build_e Line 911  env.Alias('install_esysUtils', ['build_e
911  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])
912  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])
913    
914    env.Alias('build_dataexporter', ['target_install_escriptexport_headers', 'target_escriptexport_so', 'target_escriptexportcpp_so'])
915    env.Alias('install_dataexporter', ['build_dataexporter', 'target_install_escriptexport_so', 'target_install_escriptexportcpp_so', 'target_install_dataexporter_py'])
916    
917    env.Alias('build_escriptreader', ['target_install_escriptexport_headers', 'target_escriptreader_a'])
918    env.Alias('install_escriptreader', ['build_escriptreader', 'target_install_escriptreader_a'])
919    
920  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])
921  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])
922    
# Line 855  env.Alias('install_finley', ['build_finl Line 927  env.Alias('install_finley', ['build_finl
927  build_all_list = []  build_all_list = []
928  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
929  build_all_list += ['build_paso']  build_all_list += ['build_paso']
930    build_all_list += ['build_dataexporter']
931  build_all_list += ['build_escript']  build_all_list += ['build_escript']
932  build_all_list += ['build_finley']  build_all_list += ['build_finley']
933  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']
934  #if not IS_WINDOWS_PLATFORM:    build_all_list += ['target_escript_wrapper']  #if not IS_WINDOWS_PLATFORM:    build_all_list += ['target_escript_wrapper']
935  if env['usesilo']:  build_all_list += ['target_escript2silo']  if env['usesilo']:  build_all_list += ['target_escriptconvert']
936  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
937    
938  install_all_list = []  install_all_list = []
939  install_all_list += ['target_init']  install_all_list += ['target_init']
940  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
941  install_all_list += ['install_paso']  install_all_list += ['install_paso']
942    install_all_list += ['install_dataexporter']
943  install_all_list += ['install_escript']  install_all_list += ['install_escript']
944  install_all_list += ['install_finley']  install_all_list += ['install_finley']
945  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['target_install_pyvisi_py']
# Line 873  install_all_list += ['target_install_mod Line 947  install_all_list += ['target_install_mod
947  install_all_list += ['target_install_pycad_py']  install_all_list += ['target_install_pycad_py']
948  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']
949  #if not IS_WINDOWS_PLATFORM:    install_all_list += ['target_install_escript_wrapper']  #if not IS_WINDOWS_PLATFORM:    install_all_list += ['target_install_escript_wrapper']
950  if env['usesilo']:  install_all_list += ['target_install_escript2silo']  if env['usesilo']:  install_all_list += ['target_install_escriptconvert']
951  install_all_list += ['remember_options']  install_all_list += ['remember_options']
952  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
953    
# Line 888  env.Alias('run_tests', ['install_all', ' Line 962  env.Alias('run_tests', ['install_all', '
962  env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])
963  env.Alias('build_full',['install_all','build_tests','build_py_tests'])  env.Alias('build_full',['install_all','build_tests','build_py_tests'])
964    
965    
966  ############ Targets to build the documentation ################  ############ Targets to build the documentation ################
967    
968  env.Alias('api_epydoc','install_all')  env.Alias('api_epydoc','install_all')
969    
970  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html','install_pdf'])  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html','install_pdf', 'cookbook_pdf'])
971    
972    build_platform=os.name
973    
974  if not IS_WINDOWS_PLATFORM:  if not IS_WINDOWS_PLATFORM:
975     try:     try:
976      utest=open("utest.sh","w")      utest=open("utest.sh","w")
977      build_platform=os.name      #Sometimes Mac python says it is posix      #Sometimes Mac python says it is posix
978      if (build_platform=='posix') and platform.system()=="Darwin":      if (build_platform=='posix') and platform.system()=="Darwin":
979          build_platform='darwin'          build_platform='darwin'
980      utest.write(GroupTest.makeHeader(build_platform))      utest.write(GroupTest.makeHeader(build_platform))
# Line 914  if not IS_WINDOWS_PLATFORM: Line 991  if not IS_WINDOWS_PLATFORM:
991     if not os.path.isfile(os.path.join(env['bininstall'],'escript')):     if not os.path.isfile(os.path.join(env['bininstall'],'escript')):
992         print "Copying escript wrapper"         print "Copying escript wrapper"
993         shutil.copy("bin/escript",os.path.join(env['bininstall'],'escript'))         shutil.copy("bin/escript",os.path.join(env['bininstall'],'escript'))
994    
995    ############ Targets to build PasoTests suite ################
996    
997    env.Alias('build_PasoTests','build/'+build_platform+'/paso/profiling/PasoTests')
998    
999    env.Alias('release_prep', ['docs', 'install_all'])

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