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Revision 1998 - Directory Listing
Modified Sat Nov 8 08:47:54 2008 UTC (9 years ago) by phornby
Please ignore the last checkin. A trick I used in
LazyData (which worked) when applied to THROW() failed horribly.
Why it should work in one case and not the other....... who knows?

I have reverted to the THROW_ANY macro for throw().



Revision 1997 - Directory Listing
Modified Sat Nov 8 08:14:12 2008 UTC (9 years ago) by phornby
Eliminated THROW_ANY macro, and replaced it with the usaage
THROW(/**/).

The issue: Windows preprocessor does not like THROW(). If the macro
is defined to have one argument, then windows expects one argument.

Please read the comments in esysUtils/src/system_dep.h,
They are important, as regards the intel compiler and math.h.



Revision 1950 - Directory Listing
Modified Thu Oct 30 00:59:34 2008 UTC (9 years ago) by jfenwick
Branch commit
Brought schroedinger merge upto trunk@1946.


Revision 1948 - Directory Listing
Modified Wed Oct 29 23:44:45 2008 UTC (9 years ago) by jfenwick
Branch commit.
Merge trunk changes upto 1870 (using the moreshared branchs record) to 
schroedinger.



Revision 1947 - Directory Listing
Modified Wed Oct 29 23:19:45 2008 UTC (9 years ago) by jfenwick
This does not actually have the changes in it yet.


Revision 1858 - Directory Listing
Modified Wed Oct 8 00:28:28 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/schroedinger/finley
Branch of branch moreshared_from_1812 at revision 1857.


Revision 1851 - Directory Listing
Modified Mon Oct 6 03:16:43 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branch commit.
Added files while the merge op did not add.
Modified shake59 config for non-ken users.


Revision 1850 - Directory Listing
Modified Mon Oct 6 03:07:02 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branch commit
Merging trunk changes upto and including 1849.


Revision 1822 - Directory Listing
Modified Wed Oct 1 05:42:31 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branch commit
Passes all unit tests.
Still resorting to special python versions of getDomain to get around type conversion.



Revision 1821 - Directory Listing
Modified Wed Oct 1 04:46:59 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branch commit.
Fixed some issues.
runs c++ unit tests and run_simplesolve successfully.



Revision 1820 - Directory Listing
Modified Wed Oct 1 03:48:18 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branch commit.

First experiments with shared_ptr.
There is a crash on exit due to deallocating the NullDomain object twice.
(One from shared_ptr and once in global destructors)



Revision 1813 - Directory Listing
Modified Fri Sep 26 00:58:05 2008 UTC (9 years, 1 month ago) by jfenwick
Original Path: branches/more_shared_ptrs_from_1812/finley
Branching to experiment with proxies and shared pointers.


Revision 1811 - Directory Listing
Modified Thu Sep 25 23:11:13 2008 UTC (9 years, 1 month ago) by ksteube
Original Path: trunk/finley
Copyright updated in all files


Revision 1810 - Directory Listing
Modified Thu Sep 25 06:53:26 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Updated copyright for a few remaining python files


Revision 1809 - Directory Listing
Modified Thu Sep 25 06:43:44 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Copyright updated in all python files


Revision 1807 - Directory Listing
Modified Thu Sep 25 01:04:51 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
The new MPI parallel ReadMesh is now the default after having passed
all tests both with and without MPI.
If you have been using ReadMesh you should notice no difference.
If you were using ReadMeshMPI then change to ReadMesh.


Revision 1805 - Directory Listing
Modified Wed Sep 24 23:39:00 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Added python-level methods getMPISizeWorld() and getMPIRankWorld() for MPI process info.
Test suite run_inputOutput.py runs on any number of cores now, hybrid may still be a problem.


Revision 1804 - Directory Listing
Modified Wed Sep 24 07:52:19 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
a robister version of the upwinding scheme

Revision 1802 - Directory Listing
Modified Tue Sep 23 01:03:29 2008 UTC (9 years, 2 months ago) by jfenwick
Original Path: trunk/finley
Added canTag methods to FunctionSpace and AbstractDomain (and its 
offspring).
This checks to see if the domain supports tags for the given type of 
function space.

Constructors for DataTagged now throw exceptions if you attempt to make 
a DataTagged with a FunctionSpace which does not support tags.
To allow the default constructor to work, NullDomain has a single 
functioncode which "supports" tagging.

Fixed a bug in DataTagged::toString and DataTypes::pointToString.

Added FunctionSpace::getListOfTagsSTL.

algorithm(DataTagged, BinaryFunction) in DataAlgorithm now only 
processes tags known to be in use.
This fixes mantis issue #0000186.

Added comment to Data.h intro warning about holding references if the 
underlying DataAbstract changes.

_python_ unit tests have been updated to test TaggedData with invalid 
FunctionSpaces and to give the correct answers to Lsup etc.



Revision 1801 - Directory Listing
Modified Fri Sep 19 01:37:09 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Fixed serialization of I/O for MPI...code didn't compile without MPI


Revision 1800 - Directory Listing
Modified Thu Sep 18 05:28:20 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Serialized parallel I/O when writing mesh or data to NetCDF file on multiple MPI processors.
Added domain method getMPIComm() to complement getMPISize() and getMPIRank().


Revision 1796 - Directory Listing
Modified Wed Sep 17 01:45:46 2008 UTC (9 years, 2 months ago) by jfenwick
Original Path: trunk/finley
Merged noarrayview branch onto trunk.



Revision 1790 - Directory Listing
Modified Tue Sep 16 07:45:38 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
test is obsolet

Revision 1787 - Directory Listing
Modified Mon Sep 15 01:36:34 2008 UTC (9 years, 2 months ago) by artak
Original Path: trunk/finley
MINRES solver is added to escript. Additional 16 tests are added to run_simplesolve for MINRES and TFQMR solvers

Revision 1777 - Directory Listing
Modified Tue Sep 9 06:39:37 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Implemented Lutz fix for MPI mesh dump/load using NetCDF


Revision 1776 - Directory Listing
Modified Tue Sep 9 06:03:53 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Cleared away some debugging prints


Revision 1774 - Directory Listing
Modified Tue Sep 9 03:50:45 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
bug: unitialized values

Revision 1772 - Directory Listing
Modified Tue Sep 9 00:18:49 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Added tests for reading a finley mesh and comparing it to a newly-created
mesh of the same type

Moved my mesh comparison function to be a class method


Revision 1771 - Directory Listing
Modified Mon Sep 8 22:47:55 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Removed failing test until we fix a bug.
Fixed several compiler warnings.


Revision 1770 - Directory Listing
Modified Mon Sep 8 06:58:47 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Detects an array reference out of bounds when running run_inputOutput.py


Revision 1766 - Directory Listing
Modified Mon Sep 8 02:51:14 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
code formatting

Revision 1765 - Directory Listing
Modified Mon Sep 8 02:49:57 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
some fixes for the case of empty processor

Revision 1764 - Directory Listing
Modified Mon Sep 8 02:48:26 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
type for the non mpi case fixed.

Revision 1763 - Directory Listing
Modified Mon Sep 8 02:47:55 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
more code formatting

Revision 1762 - Directory Listing
Modified Mon Sep 8 02:42:39 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
some formatting

Revision 1760 - Directory Listing
Modified Mon Sep 8 02:35:56 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
some renaming of variables to clarify what is going on

Revision 1755 - Directory Listing
Modified Mon Sep 8 01:34:40 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Added new field to NetCDF dump of mesh


Revision 1754 - Directory Listing
Modified Sun Sep 7 22:07:26 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Added new test suite run_inputOutput.py to systematically test I/O.
Can determine if two domains are same with Fourier analysis.
Added new method getNumDataPointsGlobal to return number of DPs of a distributed mesh.
Reading of tags in ReadMeshMPI failed occasionally, should be more robust now.


Revision 1753 - Directory Listing
Modified Sun Sep 7 22:01:23 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Test suite fails due to missing arg in call to Finley_Mesh_createMappings.
Added NULL arg, but still need to find proper fix as loadMesh does not work.

Adjusted SConstruct to delete pythonMPI if not compiled for MPI.


Revision 1750 - Directory Listing
Modified Wed Sep 3 23:09:29 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
small bug fixed

Revision 1749 - Directory Listing
Modified Wed Sep 3 07:25:01 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
fixes a problem with the saveVTK writing under mpi



Revision 1748 - Directory Listing
Modified Wed Sep 3 06:10:39 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
MPI parallelism for Data().dump and load.  Use multiple NetCDF
files, one file per MPI process


Revision 1745 - Directory Listing
Modified Wed Sep 3 00:41:24 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
MPI mesh_read was crashing if tags not present


Revision 1744 - Directory Listing
Modified Tue Sep 2 07:39:18 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Can now read and MPI distribute a finley mesh including the tags.


Revision 1743 - Directory Listing
Modified Tue Sep 2 00:54:05 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
Avoid crash due to zero-length writes in MPI_File_write_ordered.
Write a space instead of empty string.
The space will be at the end of a line and cause no problem.


Revision 1742 - Directory Listing
Modified Mon Sep 1 05:55:00 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
tests for VTK writer rec9 and Hex27 added

Revision 1741 - Directory Listing
Modified Mon Sep 1 04:06:41 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
VTK writer supports HEX27 and REC9 now.

Revision 1740 - Directory Listing
Modified Fri Aug 29 06:23:11 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
and some fixes for the GMSH reader

Revision 1739 - Directory Listing
Modified Fri Aug 29 06:19:53 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
Fix in the MPI mesh reader: Owner need to be set.



Revision 1738 - Directory Listing
Modified Fri Aug 29 05:06:45 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
some changes improving the robustness for MPI if the elements/processor is small

Revision 1736 - Directory Listing
Modified Fri Aug 29 02:23:16 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
This fixes a problem which is typically arising when using reduced order
with MPI and a "small" number of elements per processor. In this case it
can happen that the couple matrix is not using all entries sent to the
processor. The old implementations assumed that the indices will cover
the entire input. This assumption has been removed.



Revision 1735 - Directory Listing
Modified Fri Aug 29 00:18:26 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
This fixes a bug in the callculation of communication tables in
particular for the data to be send away. The problem was that the
previously used method based on the idea to use the elements stored on a
processor to decide what to send away is not suitable for the reduced
DOF. Now each processor sends a list of the DOFs it is expecting to its
naighbours. 




Revision 1733 - Directory Listing
Modified Thu Aug 28 01:46:07 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/finley
bug fix: if the numer of elements to be generated suppose to be zero
still face elements and nodes are generated. this is fixed now.



Revision 1732 - Directory Listing
Modified Wed Aug 27 05:47:03 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
MPI read of finley mesh file working except for a bug related to mesh_prepare


Revision 1725 - Directory Listing
Modified Tue Aug 26 03:31:49 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/finley
MPI read of .fly mesh file: fixed bug in message size while fanning out elements


Revision 1723 - Directory Listing
Modified Fri Aug 22 04:24:19 2008 UTC (9 years, 3 months ago) by gross
Original Path: trunk/finley
some unnecessary code removed.

Revision 1722 - Directory Listing
Modified Fri Aug 22 04:20:30 2008 UTC (9 years, 3 months ago) by gross
Original Path: trunk/finley
The CSR matrix patters handed ober to ParMetis may not containn the main diagonal entry. 
This revisison is fixing the problem.



Revision 1720 - Directory Listing
Modified Fri Aug 22 00:24:35 2008 UTC (9 years, 3 months ago) by gross
Original Path: trunk/finley
PARAMETIS macro renamed to USE_PARAMETIS as set by scons

Revision 1716 - Directory Listing
Modified Thu Aug 21 05:03:49 2008 UTC (9 years, 3 months ago) by gross
Original Path: trunk/finley
getListOfTags method added to FunctionSpace class

Revision 1713 - Directory Listing
Modified Wed Aug 20 07:03:45 2008 UTC (9 years, 3 months ago) by ksteube
Original Path: trunk/finley
MPI read of mesh.fly: reduced memory requirements


Revision 1707 - Directory Listing
Modified Thu Aug 14 06:38:14 2008 UTC (9 years, 3 months ago) by ksteube
Original Path: trunk/finley
Fixed nightly tests for savanna (no longer running in PBS cause can't
compile on compute node).
Modified domain.print_mesh_info() to tell how many elements are owned by
a node and how many are in the overlap.
Instrumented the preconditioner step.


Revision 1705 - Directory Listing
Modified Thu Aug 14 05:56:40 2008 UTC (9 years, 3 months ago) by ksteube
Original Path: trunk/finley
Branch scons-dev is hereby closed.
Some parts of scons scripts have been re-written.


Revision 1703 - Directory Listing
Modified Thu Aug 14 05:34:25 2008 UTC (9 years, 3 months ago) by artak
Original Path: trunk/finley
TFQMR solver is added to PASO solver. It is not parallelised yet.

Revision 1694 - Directory Listing
Modified Fri Aug 8 04:27:46 2008 UTC (9 years, 3 months ago) by artak
Original Path: trunk/finley
test_NoPDE_vector_variable is changed to avoid 0/0 division

Revision 1677 - Directory Listing
Modified Mon Jul 28 06:36:19 2008 UTC (9 years, 3 months ago) by gross
Original Path: trunk/finley
bug in the MPI version of saveVTK fixed

Revision 1674 - Directory Listing
Modified Fri Jul 25 00:47:16 2008 UTC (9 years, 4 months ago) by artak
Original Path: trunk/finley
Command line options (-e NE and -s solver ) are added

Revision 1669 - Directory Listing
Modified Thu Jul 24 01:10:04 2008 UTC (9 years, 4 months ago) by gross
Original Path: trunk/finley
A problem with VTK writer and MPI is fixed: Apparently MPI_file_open does not "delete" the file  which has the effect that 
if less date are written into the file as the file contained when opened bits of the previous containt remains in the file. This problem is fixed
by deleting the file if it exists before open it with MPI. The additional function Paso_existFile needed to be added as there is no standart C 
function to test the exists of a file.



Revision 1665 - Directory Listing
Modified Wed Jul 23 03:23:03 2008 UTC (9 years, 4 months ago) by gross
Original Path: trunk/finley
bug in the MPI version of saveVTK fixed

Revision 1664 - Directory Listing
Modified Tue Jul 22 03:41:38 2008 UTC (9 years, 4 months ago) by ksteube
Original Path: trunk/finley
Install() on Mac OS was naming shared libs file.dylib...not OK for our
libraries for python calling C++ (escriptcpp.so and finleycpp.so).
This is because python's dlopen() calls only look for .so files.


Revision 1660 - Directory Listing
Modified Mon Jul 21 03:23:46 2008 UTC (9 years, 4 months ago) by ksteube
Original Path: trunk/finley
Some variables were not declared as a result of recent cleanup


Revision 1659 - Directory Listing
Modified Fri Jul 18 02:28:13 2008 UTC (9 years, 4 months ago) by gross
Original Path: trunk/finley
some first version of a robust level set

Revision 1650 - Directory Listing
Modified Tue Jul 15 08:58:22 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley
more care with m_t and diagS needed in the pragmas.

Revision 1649 - Directory Listing
Modified Tue Jul 15 08:41:02 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley
Make operator=() on exception non-virtual. Should silence the Altix compiler.
However, if an exception is cast to another parent type, and
operator=() is called when the exception so cast is an l-value in the assignment,
an "incomplete" assignment will occur, copying only the parent class members of the 
l-value in the assignmnet.

Revision 1646 - Directory Listing
Modified Tue Jul 15 05:27:39 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley
Unused vars due to the #if 0's in the code.

Revision 1645 - Directory Listing
Modified Tue Jul 15 05:26:38 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley
unused vars.

Revision 1639 - Directory Listing
Modified Mon Jul 14 08:55:25 2008 UTC (9 years, 4 months ago) by gross
Original Path: trunk/finley


Revision 1637 - Directory Listing
Modified Mon Jul 14 05:34:59 2008 UTC (9 years, 4 months ago) by ksteube
Original Path: trunk/finley
Resolved some compiler warnings
Changed blocktimer to not use strdup, intead malloc and strcpy


Revision 1634 - Directory Listing
Modified Sat Jul 12 09:08:33 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley
linux_gcc_eg_options.py:
remove the std99 option, it is no longer needed as the code compiles without
C 1999 extension (need for these extensions elinminated in windows port).
Turn on all warnings except unknown pragmas. Should catch a lot of stuff.

SConstruct:
Impassioned plea

system_dep.h:
Add the standard incantation for dealing with const declarations
in C code called from C and C++

blocktimer:
Get the calling interface right for C code called from C and C++
and use __const as defined in system_dep.h
(Should be re-factored into compiler_dep.h file).

MeshAdapterFactory.cpp:
Since we have (effectively) no control over netCDF policy,
cast const char *'s to char *'s



Revision 1632 - Directory Listing
Modified Sat Jul 12 07:17:50 2008 UTC (9 years, 4 months ago) by trankine
Original Path: trunk/finley
compiling with netcdf on revealed an unused var.

Revision 1628 - Directory Listing
Modified Fri Jul 11 13:12:46 2008 UTC (9 years, 4 months ago) by phornby
Original Path: trunk/finley

Merge in /branches/windows_from_1456_trunk_1620_merged_in branch.

You will find a preserved pre-merge trunk in tags under tags/trunk_at_1625.
That will be useful for diffing & checking on my stupidity.

Here is a list of the conflicts and their resolution at this
point in time.


=================================================================================
(LLWS == looks like white space).

finley/src/Assemble_addToSystemMatrix.c - resolve to branch - unused var. may be wrong.....
finley/src/CPPAdapter/SystemMatrixAdapter.cpp - resolve to branch - LLWS
finley/src/CPPAdapter/MeshAdapter.cpp - resolve to branch - LLWS
paso/src/PCG.c - resolve to branch - unused var fixes.
paso/src/SolverFCT.c - resolve to branch - LLWS
paso/src/FGMRES.c - resolve to branch - LLWS
paso/src/Common.h - resolve to trunk version. It's omp.h's include... not sure it's needed,
but for the sake of saftey.....
paso/src/Functions.c - resolve to branch version, indentation/tab removal and return error
on bad unimplemented Paso_FunctionCall.
paso/src/SolverFCT_solve.c - resolve to branch version, unused vars
paso/src/SparseMatrix_MatrixVector.c - resolve to branch version, unused vars.
escript/src/Utils.cpp - resloved to branch, needs WinSock2.h
escript/src/DataExpanded.cpp - resolved to branch version - LLWS
escript/src/DataFactory.cpp - resolve to branch version
=================================================================================

This currently passes tests on linux (debian), but is not checked on windows or Altix yet.

This checkin is to make a trunk I can check out for windows to do tests on it.

Known outstanding problem is in the operator=() method of exceptions
causing warning messages on the intel compilers.

May the God of doughnuts have mercy on my soul.



Revision 1574 - Directory Listing
Modified Mon May 26 13:59:58 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some modifications that may help to speed up compilation

Revision 1573 - Directory Listing
Modified Mon May 26 13:01:31 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some modifications to run less tests


Revision 1572 - Directory Listing
Modified Mon May 26 12:50:56 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some openmp problems in PCG fixed.

Revision 1570 - Directory Listing
Modified Sat May 24 21:31:04 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
modifications to PCG to support dynamic scheduling

Revision 1568 - Directory Listing
Modified Sat May 24 03:15:08 2008 UTC (9 years, 6 months ago) by ksteube
Original Path: trunk/finley
Some testing on ac.apac.edu.au, more work needed
New pyvisi example offscreen.py for offscreen rendering


Revision 1567 - Directory Listing
Modified Thu May 22 22:52:41 2008 UTC (9 years, 6 months ago) by ksteube
Original Path: trunk/finley
scons all_tests passes on Savanna with OMP=1 and OMP=4.
New boost for Savanna.
A few more cases of #s -> %s.


Revision 1566 - Directory Listing
Modified Thu May 22 12:07:35 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some changes to chunk test

Revision 1565 - Directory Listing
Modified Thu May 22 10:19:47 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some small fixes for openmp

Revision 1564 - Directory Listing
Modified Thu May 22 09:31:33 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some openmp dynamic scheduling for MVM.

Revision 1562 - Directory Listing
Modified Wed May 21 13:04:40 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
The algebraic upwinding with MPI. The case of boundary constraint needs still some attention. 



Revision 1556 - Directory Listing
Modified Mon May 12 00:54:58 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
Modification to allow mixed mode execution. 
In order to keep the code portable accross platform all MPI calls within
parallel regions have been moved. 



Revision 1555 - Directory Listing
Modified Mon May 12 00:32:08 2008 UTC (9 years, 6 months ago) by ksteube
Original Path: trunk/finley
Adjusted vantage point


Revision 1553 - Directory Listing
Modified Thu May 8 09:38:07 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some small bugs fixed to get MPI going with the modification. MPI version of BiCGStab added.

Revision 1552 - Directory Listing
Modified Thu May 8 08:52:41 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/finley
some changes to make the implementatiopn of a upwind MPI version easier

Revision 1543 - Directory Listing
Modified Wed Apr 30 23:21:27 2008 UTC (9 years, 6 months ago) by ksteube
Original Path: trunk/finley
Create an MPEG movie from the state.N.vtu files of convection.py using pyvisi


Revision 1518 - Directory Listing
Modified Fri Apr 18 05:47:52 2008 UTC (9 years, 7 months ago) by artak
Original Path: trunk/finley
Test are created for MINRES and TFQMR methods

Revision 1516 - Directory Listing
Modified Fri Apr 18 01:02:25 2008 UTC (9 years, 7 months ago) by ksteube
Original Path: trunk/finley
Reduced L and changed Arenious from 22.0 to 0.0


Revision 1515 - Directory Listing
Modified Thu Apr 17 23:36:31 2008 UTC (9 years, 7 months ago) by ksteube
Original Path: trunk/finley
Change to 3-D and change viscosity


Revision 1514 - Directory Listing
Modified Wed Apr 16 00:15:44 2008 UTC (9 years, 7 months ago) by artak
Original Path: trunk/finley
default input parameter iter_restart for GMRES is set to 20

Revision 1513 - Directory Listing
Modified Tue Apr 15 08:47:57 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
pragma ivdep removed. icc produced wrong code.

Revision 1512 - Directory Listing
Modified Tue Apr 15 00:54:25 2008 UTC (9 years, 7 months ago) by ksteube
Original Path: trunk/finley
Some typos


Revision 1494 - Directory Listing
Modified Mon Apr 14 06:53:28 2008 UTC (9 years, 7 months ago) by phornby
Original Path: trunk/finley
Make this exactly the same as the run_linearPDEsOnFinley.py.trunk_version on the windows
port branch.
Makes merge easier later.



Revision 1488 - Directory Listing
Modified Fri Apr 11 00:22:31 2008 UTC (9 years, 7 months ago) by artak
Original Path: trunk/finley
restart parameter is changed in GMRES(m)

Revision 1483 - Directory Listing
Modified Wed Apr 9 03:20:00 2008 UTC (9 years, 7 months ago) by artak
Original Path: trunk/finley
command line input parameters manipulation and execution time calculation are added

Revision 1476 - Directory Listing
Modified Mon Apr 7 23:38:50 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
Jacobian-free Newton method added to Paso

Revision 1474 - Directory Listing
Modified Mon Apr 7 01:27:01 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
restart is supported now.

Revision 1472 - Directory Listing
Modified Thu Apr 3 09:07:07 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
some first steps towards restart added

Revision 1471 - Directory Listing
Modified Thu Apr 3 05:19:06 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
test for GMRES solver for Stokes problem added

Revision 1466 - Directory Listing
Modified Wed Apr 2 03:33:43 2008 UTC (9 years, 7 months ago) by artak
Original Path: trunk/finley


Revision 1464 - Directory Listing
Modified Tue Apr 1 23:27:09 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
bug for interpoltion from reduced solution to elements in MPI fixed.

Revision 1463 - Directory Listing
Modified Tue Apr 1 05:20:57 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/finley
a better convection code

Revision 1459 - Directory Listing
Modified Thu Mar 27 01:49:10 2008 UTC (9 years, 7 months ago) by ksteube
Original Path: trunk/finley
Implemented ParMETIS for mesh partition optimization under MPI.
Documented optimize=True in User Guide for Brick() and Rectangle().


Revision 1456 - Directory Listing
Modified Thu Feb 28 17:20:49 2008 UTC (9 years, 8 months ago) by phornby
Original Path: trunk/finley
Clean up some debugging files from the branch merge.



Revision 1455 - Directory Listing
Modified Thu Feb 28 17:19:44 2008 UTC (9 years, 8 months ago) by phornby
Original Path: trunk/finley
Merge of branches/windows_from_1431_trunk.

Revamp of the exception system.
Fix unused vars and signed/unsigned comparisons.
defined a macro THROW(ARG) in the system_dep.h's to
deal with the expectations of declarations on different architectures.

Details in the logs of branches/windows_from_1431_trunk.

pre-merge snapshot of the trunk in tags/trunk_at_1452



Revision 1428 - Directory Listing
Modified Wed Feb 27 08:07:11 2008 UTC (9 years, 8 months ago) by trankine
Original Path: trunk/finley
Merge changes from windows port branch to test build on *nix not broken.

Revision 1425 - Directory Listing
Modified Wed Feb 27 06:12:04 2008 UTC (9 years, 8 months ago) by artak
Original Path: trunk/finley
Added new test for BiCGStab in run_simplesolve.py
algorithmic change in BICGSTAB: from r=r-wt to r=s-wt


Revision 1417 - Directory Listing
Modified Mon Feb 25 04:45:48 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/finley
some more work on the transport solver.

Revision 1414 - Directory Listing
Modified Thu Feb 14 10:01:43 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/finley
a first verion of a Stokes solver

Revision 1411 - Directory Listing
Modified Thu Feb 7 08:09:15 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/finley
second test for upwinding added

Revision 1410 - Directory Listing
Modified Thu Feb 7 04:24:00 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/finley
a new version of the algebric upwinding a. flux limiter

Revision 1407 - Directory Listing
Modified Mon Feb 4 06:45:48 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/finley
new upwinding algorithm (still fails)

Revision 1402 - Directory Listing
Modified Thu Jan 31 00:17:49 2008 UTC (9 years, 9 months ago) by ksteube
Original Path: trunk/finley
now implemented to read/fan out elements


Revision 1401 - Directory Listing
Modified Fri Jan 25 04:31:18 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
rewrite antidiffusion calculation to avoid coloring for OPENMP parallelization

Revision 1400 - Directory Listing
Modified Thu Jan 24 06:04:31 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
better test example for upwinding added

Revision 1393 - Directory Listing
Modified Mon Jan 21 06:21:14 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
axissymmetric collaps added.

Revision 1392 - Directory Listing
Modified Mon Jan 21 06:20:54 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
axissymmetric collaps added.

Revision 1388 - Directory Listing
Modified Fri Jan 11 07:45:58 2008 UTC (9 years, 10 months ago) by trankine
Original Path: trunk/finley
And get the *(&(*&(* name right

Revision 1387 - Directory Listing
Modified Fri Jan 11 07:45:26 2008 UTC (9 years, 10 months ago) by trankine
Original Path: temp/finley
Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

Revision 1384 - Directory Listing
Modified Fri Jan 11 02:29:38 2008 UTC (9 years, 10 months ago) by phornby
Original Path: temp_trunk_copy/finley
Make a temp copy of the trunk before checking in the windows changes



Revision 1382 - Directory Listing
Modified Thu Jan 10 00:21:22 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
some tests got deactivated. they are back now.

Revision 1379 - Directory Listing
Modified Wed Jan 9 04:17:03 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
this seems to work on the cognac@ivec.org

Revision 1378 - Directory Listing
Modified Wed Jan 9 03:53:38 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
new reference files considering the change in quadrature schemes



Revision 1377 - Directory Listing
Modified Wed Jan 9 03:45:59 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
Some code was moved around to slow down the bustling intel compiler v10.



Revision 1376 - Directory Listing
Modified Wed Jan 9 01:38:18 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
inserted sys.exit(1) into the tests so scons can detect the failure of the test. 
A similar statement has been removed from an earlier as it produces problems on 64bit Linux. Previously exit(0) was called in case of success but now this is not done in order to avoid a fatal end of the program. in the case of an error in the test there could be a fatal error so but I guess that this not really a problem.

PS: the fact that signal 0 was returned even for the case of an error lead to the illusion that all tests have been completed successfully.



Revision 1375 - Directory Listing
Modified Wed Jan 9 00:15:05 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
bug in interpolation at reduced face elements fixed.

Revision 1374 - Directory Listing
Modified Tue Jan 8 09:37:55 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
some changes to get things going on the cognac.ivec.org.

Revision 1371 - Directory Listing
Modified Thu Jan 3 06:11:21 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
some bugs in the updwing scheme but there are still problem with the cross wind direction.

Revision 1370 - Directory Listing
Modified Wed Jan 2 09:21:43 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/finley
explicit upwinding scheme added.

Revision 1368 - Directory Listing
Modified Wed Dec 19 03:45:20 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
very first step towards a pythn wrapper for the transport problem.

Revision 1367 - Directory Listing
Modified Wed Dec 19 02:45:07 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
finley can now assemble a transport problem.

Revision 1366 - Directory Listing
Modified Tue Dec 18 05:49:17 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
finley can create a TransportProblem now

Revision 1365 - Directory Listing
Modified Mon Dec 17 07:28:23 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
some cosmetics.

Revision 1364 - Directory Listing
Modified Mon Dec 17 07:22:45 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
finley interface to paso's transport solver added.

Revision 1361 - Directory Listing
Modified Fri Dec 14 09:26:51 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
first steps towards a flux controlled transport solver.

Revision 1360 - Directory Listing
Modified Thu Dec 13 05:05:00 2007 UTC (9 years, 11 months ago) by ksteube
Original Path: trunk/finley
Partial implementation of ReadMeshMPI.
Will eventually replace ReadMesh but for now has a different name.


Revision 1359 - Directory Listing
Modified Wed Dec 5 03:42:09 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
debug print removed.

Revision 1358 - Directory Listing
Modified Wed Dec 5 03:41:06 2007 UTC (9 years, 11 months ago) by gross
Original Path: trunk/finley
setTaggedValue works now for expanded data.

Revision 1353 - Directory Listing
Modified Thu Nov 22 06:05:35 2007 UTC (10 years ago) by matt
Original Path: trunk/finley
Reversed the removal of blocktimer code. This needs to be fixed properly for
the Windows stuff to work.



Revision 1352 - Directory Listing
Modified Thu Nov 22 03:43:28 2007 UTC (10 years ago) by matt
Original Path: trunk/finley
Removed blocktimer code from Finley_Assemble_PDE().


Revision 1347 - Directory Listing
Modified Fri Nov 16 05:37:07 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
Completed mesh.dump(file) and mesh=LoadMesh(file) by adding TagMap and
implementing MPI parallelism.
Now allocating ElementFile for ContactElements even if there are none.
Removed file Mesh_dump.c since dump/loadMesh are in CPPAdapter/MeshAdapter*.cpp.


Revision 1346 - Directory Listing
Modified Wed Nov 14 22:48:12 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
dump/LoadMesh methods work except for TagMap, Point elements probably OK but are untested.


Revision 1345 - Directory Listing
Modified Wed Nov 14 07:53:34 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
Created LoadMesh to read a mesh from a distributed NetCDF file.
Can read nodes but not elements yet.


Revision 1344 - Directory Listing
Modified Wed Nov 14 04:28:25 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
Now using TMPMEMFREE but still thrashes memory for very large mesh.
Future solution will be to use NetCDF subsetting and less temp memory.


Revision 1343 - Directory Listing
Modified Wed Nov 14 02:48:02 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
First cut implementation of mesh.dump() using NetCDF.  TagMap not
saved yet.  The code for Points probably works but has not been tested.


Revision 1342 - Directory Listing
Modified Thu Nov 8 23:56:58 2007 UTC (10 years ago) by gross
Original Path: trunk/finley
improvements on integration schemes for tets and tris: double precision (not all), higher orders

Revision 1341 - Directory Listing
Modified Thu Nov 8 23:55:20 2007 UTC (10 years ago) by gross
Original Path: trunk/finley
tests for numerical integration added.

Revision 1340 - Directory Listing
Modified Thu Nov 8 06:24:43 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
Fixed create a local labeling of the DOFs


Revision 1339 - Directory Listing
Modified Wed Nov 7 01:53:12 2007 UTC (10 years ago) by ksteube
Original Path: trunk/finley
Modified scons target release_src to include lib/ and include/ since
their presence is required for a build.  Modified
mydomain.print_mesh_info(True) to include more useful info about a
distributed domain.  Added mypde.getOperator().print_matrix_info(True)
to tell about a distributed matrix.



Revision 1338 - Directory Listing
Modified Mon Nov 5 06:32:29 2007 UTC (10 years ago) by gross
Original Path: trunk/finley
bug in the selection of the order of the output mesh fixed.

Revision 1335 - Directory Listing
Modified Fri Nov 2 05:54:25 2007 UTC (10 years ago) by gross
Original Path: trunk/finley
color ranges were not initialized.

Revision 1326 - Directory Listing
Modified Mon Oct 1 08:10:41 2007 UTC (10 years, 1 month ago) by ksteube
Original Path: trunk/finley
Implemented domain.print_mesh_info() so we can see the distribution of elements & nodes.
Implemented -DBOUNDS_CHECK to catch an error with periodicN=True.


Revision 1322 - Directory Listing
Modified Thu Sep 27 04:40:43 2007 UTC (10 years, 1 month ago) by ksteube
Original Path: trunk/finley
Code now compiles and runs on cyclone.hpcu.uq.edu.au.
Had to remove intelc from the SConstruct, but didn't commit that change.
Changed a couple C++ comments to C comments.


Revision 1317 - Directory Listing
Modified Tue Sep 25 03:41:48 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/finley
yet another file copied from MPI branch to trunk


Revision 1315 - Directory Listing
Modified Tue Sep 25 02:41:13 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/finley
Copied more files from MPI branch to trunk


Revision 1313 - Directory Listing
Modified Tue Sep 25 01:44:26 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/finley
Copied a handful of files from trunk-mpi-branch into trunk


Revision 1312 - Directory Listing
Modified Mon Sep 24 06:18:44 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/finley
The MPI branch is hereby closed. All future work should be in trunk.

Previously in revision 1295 I merged the latest changes to trunk into trunk-mpi-branch.
In this revision I copied all files from trunk-mpi-branch over the corresponding
trunk files. I did not use 'svn merge', it was a copy.


Revision 1310 - Directory Listing
Modified Mon Sep 24 04:00:47 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/finley
A few additions to make trunk match trunk-mpi-branch


Revision 1235 - Directory Listing
Modified Mon Aug 13 00:25:29 2007 UTC (10 years, 3 months ago) by phornby
Original Path: trunk/finley
Started the removal of IS_WINDOWS_PLATFORM, and now insis that the windows options file be kept up to date, and be complete.

boost_libs -> boost_lib.

Revision 1221 - Directory Listing
Modified Fri Aug 3 00:27:20 2007 UTC (10 years, 3 months ago) by ksteube
Original Path: trunk/finley
Disabled HRZ lumping until the tests pass


Revision 1220 - Directory Listing
Modified Thu Aug 2 04:46:20 2007 UTC (10 years, 3 months ago) by btully
Original Path: trunk/finley
Included HRZ lumping scheme for the LUMPED solver.


Revision 1204 - Directory Listing
Modified Sat Jun 23 11:43:12 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
a frame for an improved lumping procedure added.

Revision 1198 - Directory Listing
Modified Tue Jun 19 00:24:29 2007 UTC (10 years, 5 months ago) by btully
Original Path: trunk/finley
Updated Rec9 Shape Functions.
Included a new definition for Hex27 Reference Element and associated Shape Functions.


Revision 1185 - Directory Listing
Modified Thu May 31 04:33:31 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
once again: some changes to get the tests passed on windows.

Revision 1181 - Directory Listing
Modified Wed May 30 06:08:44 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
some more test for vtk interface

Revision 1180 - Directory Listing
Modified Wed May 30 05:53:38 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
some new test data

Revision 1179 - Directory Listing
Modified Wed May 30 05:10:02 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
some debug print outs removed.

Revision 1178 - Directory Listing
Modified Wed May 30 05:03:17 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
bug in visualization interface test fixed.

Revision 1177 - Directory Listing
Modified Wed May 30 05:01:29 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
debug print out removed.

Revision 1174 - Directory Listing
Modified Tue May 29 07:05:59 2007 UTC (10 years, 5 months ago) by gross
Original Path: trunk/finley
more modifications to the test rquired by the new intergartion schemes

Revision 1173 - Directory Listing
Modified Mon May 28 03:29:57 2007 UTC (10 years, 5 months ago) by ksteube
Original Path: trunk/finley
Reverted to revision 1170, update in 1171 was a mistake


Revision 1171 - Directory Listing
Modified Fri May 25 06:55:05 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
some modifications to the tests to consider the new integration schemes for tri and tet

Revision 1170 - Directory Listing
Modified Fri May 25 05:24:57 2007 UTC (10 years, 6 months ago) by btully
Original Path: trunk/finley
Added new methods for integration of Tri's and Tet's For Order 2 and 3.
NB: There is a conflict in the testing of the getNormal() function. On consultation with Lutz, we have concluded this is an issue with the test rather than the new methods.


Revision 1163 - Directory Listing
Modified Wed May 23 23:56:39 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
import of DISPLAY environment variable into scons ENV added. This is required to run pyvisi tests under XGL

Revision 1157 - Directory Listing
Modified Mon May 21 06:45:52 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
ops, wrong name

Revision 1156 - Directory Listing
Modified Mon May 21 06:45:14 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
node label optimization

Revision 1149 - Directory Listing
Modified Thu May 17 00:30:15 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
some fixes from the windows version

Revision 1141 - Directory Listing
Modified Tue May 15 04:24:51 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
Some changes to make things run on windows. There is still a problem with netcdf an long file names on windows but there is the suspicion that this is a bigger problem related to boost (compiler options). In fact runs with large numbers of iteration/time steps tend to create seg faults. 

Revision 1139 - Directory Listing
Modified Mon May 14 05:12:53 2007 UTC (10 years, 6 months ago) by ksteube
Original Path: trunk/finley
Finished renaming of boost_lib to boost_libs and boost_lib_path to boost_libs_path.


Revision 1137 - Directory Listing
Modified Thu May 10 08:11:31 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
This version passes the tests on windows except for 

   * vtk
   * netCDF

The version needs to be tested on altix and linux

Revision 1135 - Directory Listing
Modified Wed May 9 01:58:32 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
These are still modifications for windows.

The run_generators.py and run_visualization_interface.py pass now. There is no need for the win32 reference directory. 

Revision 1134 - Directory Listing
Modified Wed May 9 01:44:04 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
fixed a bag in the extra bits to make the ordering unique. This does not effect the correctness of the result but makes sure that the results are independent from the sorting algorithm.

Revision 1133 - Directory Listing
Modified Tue May 8 07:19:33 2007 UTC (10 years, 6 months ago) by gross
Original Path: trunk/finley
Changes needed for windows. This still does not work on and has not run on linux and the altix. 
 
There are a few changes in names in the scons script, in particular _libs is used rather than _lib and _libs is always a list. By default on windows MSVC is used. The location of python is at C:\Program Files\python<version>, boost at C:\Program Files\boost and netcdf at C:\Program Files\netcdf. 

 

Revision 1116 - Directory Listing
Modified Mon Apr 23 03:36:34 2007 UTC (10 years, 7 months ago) by gross
Original Path: trunk/finley
Interporpolation from full to reduced integration order added.



Revision 1107 - Directory Listing
Modified Thu Apr 19 02:14:18 2007 UTC (10 years, 7 months ago) by gross
Original Path: trunk/finley
Small bug in ReadMeh call fixed.
Test for typ of verbose argument in pdetools.SaddlePointSolver added.



Revision 1092 - Directory Listing
Modified Fri Apr 13 03:39:49 2007 UTC (10 years, 7 months ago) by gross
Original Path: trunk/finley
the useless profilinf for data.cpp removed (doDebug=yes should work again)
and a small bug in the gmsh reader fixed.


Revision 1080 - Directory Listing
Modified Wed Apr 11 06:07:30 2007 UTC (10 years, 7 months ago) by gross
Original Path: trunk/finley
small typo fixed.

Revision 1072 - Directory Listing
Modified Thu Mar 29 06:44:30 2007 UTC (10 years, 7 months ago) by gross
Original Path: trunk/finley
PDE assemblage for reduced integration order + tests added.



Revision 1065 - Directory Listing
Modified Tue Mar 27 09:04:56 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
tests VTK + DX files for reduced integration order added. Tests pass.

Revision 1064 - Directory Listing
Modified Tue Mar 27 06:21:02 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
test for reduced integration order for grad, interpolate and integrate added.
Bug shown by the tests have been fixed.



Revision 1063 - Directory Listing
Modified Mon Mar 26 08:29:18 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
test for creation of reduced function spaces added.
tests for dumping data on reduced function spaces added.
This showed a small bug with compilation setting for compilation with netCDF which is fixed



Revision 1062 - Directory Listing
Modified Mon Mar 26 06:17:53 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
reduced integration schemes are implemented now for grad, integrate, etc. Tests still to be added.

Revision 1059 - Directory Listing
Modified Fri Mar 23 11:01:53 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
first steps toward reduced element integration order. The escript bit is done but the finley part still needs work.

Revision 1049 - Directory Listing
Modified Tue Mar 20 03:00:18 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
bandwidth optimizer has been moved back (Lutz: switch on your brain.
)

Revision 1048 - Directory Listing
Modified Tue Mar 20 02:59:14 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
bandwidth optimizer has been moved.

Revision 1047 - Directory Listing
Modified Tue Mar 20 02:54:09 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
some clean-up

Revision 1046 - Directory Listing
Modified Tue Mar 20 02:52:24 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
the finley benchmarks have been moved into a seperate directory to get keep them out off the building process.

Revision 1044 - Directory Listing
Modified Mon Mar 19 07:29:31 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
clear name tagging is supported now.

Revision 1030 - Directory Listing
Modified Wed Mar 14 05:14:44 2007 UTC (10 years, 8 months ago) by phornby
Original Path: trunk/finley
Assemble_CopyElementData.c - resolve with my local edits.
Mesh_saveVTK.c - remove debug print.
DataArrayView.h - remove dllim/export declarations on template functions.



Revision 1028 - Directory Listing
Modified Wed Mar 14 00:15:24 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
modifications to be compliant with _WIN32. The substitutes for asinh, acosh, atanh are still missing (erf will through an exception)

Revision 1022 - Directory Listing
Modified Tue Mar 13 02:25:53 2007 UTC (10 years, 8 months ago) by phornby
Original Path: trunk/finley
Now define the destructors for all the Exceptions (sorry guys & gals).



Revision 1020 - Directory Listing
Modified Mon Mar 12 10:12:36 2007 UTC (10 years, 8 months ago) by phornby
Original Path: trunk/finley
Added explicit destructors to all Exception classes.

Fixed an ifdef in TestCase.cpp

Made the conditional definition of M_PI in LocalOps.h
depend only on M_PI being undefined.

Replace dynamically dimensioned arrays in DataFactory & DataTagged with malloc.

sort() method of list does not take a named argument
(despite the manual's claims to the contary).



Revision 1003 - Directory Listing
Modified Thu Mar 1 01:53:37 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
small fix on the finley gmsh reader for the case of no face elements.

Revision 997 - Directory Listing
Modified Mon Feb 26 06:31:45 2007 UTC (10 years, 8 months ago) by gross
Original Path: trunk/finley
small small fixes in modellib

Revision 990 - Directory Listing
Modified Wed Feb 21 04:27:52 2007 UTC (10 years, 9 months ago) by ksteube
Original Path: trunk/finley
Cleaned up the python in-line doc to make epydoc work better

Configured for shake71 to find NetCDF libraries


Revision 983 - Directory Listing
Modified Tue Feb 20 02:49:08 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
full Data object dump and load now available. Tests added.

Revision 982 - Directory Listing
Modified Mon Feb 19 23:55:52 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
data object load checks for sample  ordering now.

Revision 971 - Directory Listing
Modified Wed Feb 14 04:40:49 2007 UTC (10 years, 9 months ago) by ksteube
Original Path: trunk/finley
Had to undo commit to new MPI branch. The changes went into the original and
not the branch. The files committed here are exactly the same as revision 969.



Revision 969 - Directory Listing
Modified Tue Feb 13 23:02:23 2007 UTC (10 years, 9 months ago) by ksteube
Original Path: trunk/finley
Parallelization using MPI for solution of implicit problems.

Parallelization for explicit problems has already been accomplished in
the main SVN branch.

This is incomplete and is not ready for use.



Revision 967 - Directory Listing
Modified Tue Feb 13 09:40:12 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
dump and load of expanded data via netCDF added. some test are still missing.

Revision 965 - Directory Listing
Modified Tue Feb 13 05:38:45 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
johns local setting removed.

Revision 964 - Directory Listing
Modified Tue Feb 13 05:10:26 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
The set/getRefVal functions of Data objects have been removed (mainly to avoid later problems with MPI).
Moreover, a faster access to the reference id of samples has been introduced. I don't think that anybody will
profit form this at this stage but it will allow a faster dump of data objects.



Revision 960 - Directory Listing
Modified Tue Feb 13 01:39:05 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
typo in file name fixed

Revision 959 - Directory Listing
Modified Tue Feb 13 01:38:39 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
typo in file name fixed

Revision 950 - Directory Listing
Modified Tue Feb 6 07:01:11 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
escript data objects can now be saved to netCDF files, see http://www.unidata.ucar.edu/software/netcdf/.
Currently only constant data are implemented with expanded and tagged data to follow.
There are two new functions to dump a data object

   s=Data(...)
   s.dump(<filename>)

and to recover it

   s=load(<filename>, domain)

Notice that the function space of s is recovered but domain is still need. 

dump and load will replace archive and extract.

The installation needs now the netCDF installed. 



Revision 944 - Directory Listing
Modified Tue Jan 30 08:57:37 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
PropertySet added

Revision 940 - Directory Listing
Modified Mon Jan 29 00:09:08 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/finley
ivdep removed as it produces wrong results with OPenMP

Revision 939 - Directory Listing
Modified Thu Jan 25 04:23:38 2007 UTC (10 years, 10 months ago) by gross
Original Path: trunk/finley
bug in finley mesh reader fixed

Revision 935 - Directory Listing
Modified Tue Jan 23 09:53:10 2007 UTC (10 years, 10 months ago) by gross
Original Path: trunk/finley
a missing file

Revision 934 - Directory Listing
Modified Tue Jan 23 09:52:45 2007 UTC (10 years, 10 months ago) by gross
Original Path: trunk/finley
gmsh file reader for finley

Revision 929 - Directory Listing
Modified Wed Jan 17 07:41:13 2007 UTC (10 years, 10 months ago) by gross
Original Path: trunk/finley
reverse orientation added but does not work for 2D yet.

Revision 903 - Directory Listing
Modified Fri Nov 17 01:59:49 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
bug with tagged data in vtk and dx writer fixed

Revision 897 - Directory Listing
Modified Thu Nov 9 07:37:40 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
cfs added

Revision 896 - Directory Listing
Modified Thu Nov 9 05:46:31 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
a new version

Revision 895 - Directory Listing
Modified Thu Nov 9 05:45:55 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
moved to make plave for better version

Revision 894 - Directory Listing
Modified Thu Nov 9 05:45:22 2006 UTC (11 years ago) by gross
Original Path: trunk/finley


Revision 893 - Directory Listing
Modified Wed Nov 8 08:20:19 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
small bug fixed

Revision 892 - Directory Listing
Modified Wed Nov 8 06:14:29 2006 UTC (11 years ago) by gross
Original Path: trunk/finley


Revision 888 - Directory Listing
Modified Tue Nov 7 08:31:26 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
Problem in Mesh_findMatchingFaces.c fixed:
default tolerance in python interface was set too tight.




Revision 887 - Directory Listing
Modified Thu Nov 2 07:17:07 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
some more work on the slip distribution

Revision 884 - Directory Listing
Modified Mon Oct 30 06:37:30 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
simple mesh generator for slip_stress

Revision 883 - Directory Listing
Modified Mon Oct 30 06:12:54 2006 UTC (11 years ago) by gross
Original Path: trunk/finley
new example added

Revision 878 - Directory Listing
Modified Wed Oct 25 03:42:56 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
bigger mesh

Revision 877 - Directory Listing
Modified Wed Oct 25 03:06:58 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
backtraking in the saddlepoint problem (not perfect yet)

Revision 873 - Directory Listing
Modified Mon Oct 16 04:07:33 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
uszawa scheme runs with variable viscosity

Revision 868 - Directory Listing
Modified Tue Oct 10 22:32:13 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
new benchmark problem

Revision 866 - Directory Listing
Modified Mon Oct 9 03:50:20 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
now GEAR scheme is used

Revision 865 - Directory Listing
Modified Fri Oct 6 10:02:18 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
some functions for minimizing a function added. there is still some work required but successfully applied in an aplication

Revision 862 - Directory Listing
Modified Tue Oct 3 06:01:30 2006 UTC (11 years, 1 month ago) by gross
Original Path: trunk/finley
bug in mesh generator fixed.

Revision 859 - Directory Listing
Modified Tue Sep 26 02:19:18 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
tests for order2 tetrahedron elements added


Revision 858 - Directory Listing
Modified Tue Sep 26 01:01:39 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
typo fixed

Revision 857 - Directory Listing
Modified Tue Sep 26 01:00:45 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
tests for order1 tetrahedron elements added

Revision 855 - Directory Listing
Modified Fri Sep 22 09:30:06 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
some tests for triangle meshes added

Revision 853 - Directory Listing
Modified Wed Sep 20 05:56:36 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
some performance problems wit openmp fixed.

Revision 850 - Directory Listing
Modified Sun Sep 17 23:27:00 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
some problems with vtk writer fixed

Revision 844 - Directory Listing
Modified Thu Sep 7 08:32:01 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
with better  mesh

Revision 843 - Directory Listing
Modified Thu Sep 7 05:55:12 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
some timing added

Revision 842 - Directory Listing
Modified Thu Sep 7 05:40:22 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
a little wave propagation simulation

Revision 820 - Directory Listing
Modified Mon Aug 28 06:55:36 2006 UTC (11 years, 2 months ago) by gross
Original Path: trunk/finley
make the modelframe test run

Revision 818 - Directory Listing
Modified Sun Aug 27 11:10:34 2006 UTC (11 years, 2 months ago) by dhawcroft
Original Path: trunk/finley
saveVTK fixes



Revision 817 - Directory Listing
Modified Sat Aug 26 03:08:52 2006 UTC (11 years, 3 months ago) by ksteube
Original Path: trunk/finley
Can now compile and run with MPI on shake71



Revision 815 - Directory Listing
Modified Wed Aug 23 09:31:50 2006 UTC (11 years, 3 months ago) by gross
Original Path: trunk/finley
ops! wrong file has been sent

Revision 814 - Directory Listing
Modified Wed Aug 23 09:31:10 2006 UTC (11 years, 3 months ago) by gross
Original Path: trunk/finley
small bug in general tensor propduct fixed

Revision 812 - Directory Listing
Modified Thu Aug 17 05:49:59 2006 UTC (11 years, 3 months ago) by dhawcroft
Original Path: trunk/finley


Revision 808 - Directory Listing
Modified Fri Aug 11 01:25:16 2006 UTC (11 years, 3 months ago) by ksteube
Original Path: trunk/finley
Can now build escript and use doxygen on shake71



Revision 806 - Directory Listing
Modified Thu Aug 10 11:58:52 2006 UTC (11 years, 3 months ago) by gross
Original Path: trunk/finley
Interface to the direct solver library UMLPACK is no implemented.



Revision 799 - Directory Listing
Modified Mon Aug 7 23:30:53 2006 UTC (11 years, 3 months ago) by ksteube
Original Path: trunk/finley
Moved a #pragma to modify the appropriate line


Revision 798 - Directory Listing
Modified Fri Aug 4 01:05:36 2006 UTC (11 years, 3 months ago) by gross
Original Path: trunk/finley
Reimplementation of the assemblage with persistent jacobeans.
There are also a few changes to the tests which has now
dramatically reduced the memory demand.



Revision 796 - Directory Listing
Modified Mon Jul 31 06:16:17 2006 UTC (11 years, 3 months ago) by dhawcroft
Original Path: trunk/finley
much faster parallel saveVTK
needs testers, don't be shy


Revision 794 - Directory Listing
Modified Sun Jul 30 03:45:01 2006 UTC (11 years, 3 months ago) by dhawcroft
Original Path: trunk/finley


Revision 793 - Directory Listing
Modified Sat Jul 29 19:40:22 2006 UTC (11 years, 3 months ago) by dhawcroft
Original Path: trunk/finley
Preliminary MPI version of saveVTK. Needs testers. Works for point data and should work for cell centered data.

Revision 788 - Directory Listing
Modified Wed Jul 26 05:12:15 2006 UTC (11 years, 4 months ago) by bcumming
Original Path: trunk/finley
small corrections to code in previous commit, and some header files that
should have been included in the last commit.



Revision 787 - Directory Listing
Modified Wed Jul 26 01:46:45 2006 UTC (11 years, 4 months ago) by bcumming
Original Path: trunk/finley
MPI update
Each element (normal elements, faceElements, ContactElements and points)
are now assigned a unique global id to streamline per-element
calculations and file IO of element data.




Revision 783 - Directory Listing
Modified Tue Jul 18 01:32:50 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
coordinates, element size and normals returned by corresponding
FunctionSpace mesthods are now protected against updates. So 
+=, -=, *=, /=, setTaggedValue, fillFromNumArray will through an
excpetion.

The FunctionSpace class does nut buffer the oordinates, element size and
normals yet.



Revision 782 - Directory Listing
Modified Tue Jul 18 00:47:47 2006 UTC (11 years, 4 months ago) by bcumming
Original Path: trunk/finley
Large number of changes to Finley for meshing in MPI.

- optimisation and neatening up of rectcanglular mesh generation code
- first and second order 1D, 2D and 3D rectangular meshes are now
  available in finley and escript using MPI.
- reduced meshes now generated in MPI, and interpolation to and from 
  reduced data types now supported.  


Revision 781 - Directory Listing
Modified Fri Jul 14 08:47:38 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
grad functions linked into the persistent jacobean scheme

Revision 779 - Directory Listing
Modified Fri Jul 14 07:41:31 2006 UTC (11 years, 4 months ago) by woo409
Original Path: trunk/finley
+ Updated compilation options for Cognac to squeeze out a bit more performance
+ Now compiles using the Intel Math headers (mathimf.h) rather than plain math.h on both Win32 and Linux platforms when using the Intel compiler. Gives a small boost to performance on Altix and is essential on Windows



Revision 778 - Directory Listing
Modified Thu Jul 13 02:27:45 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
add a switch to stop calls of external solver libraries

Revision 777 - Directory Listing
Modified Wed Jul 12 08:54:45 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
integration with persistent jacobeans is running now

Revision 776 - Directory Listing
Modified Wed Jul 12 00:07:31 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
basic code for persistence of jacobeans added. routines are not called yet

Revision 773 - Directory Listing
Modified Fri Jul 7 10:10:00 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
assemblage tests added

Revision 769 - Directory Listing
Modified Sun Jul 2 23:58:22 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
A bit more tests are generated now. Ther is still a problem with the slection of the solution order.



Revision 768 - Directory Listing
Modified Fri Jun 30 09:26:16 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
and the generation of tests for contact elements works now.

Revision 767 - Directory Listing
Modified Fri Jun 30 07:29:08 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
new FunctionSpace method setTags added

Revision 766 - Directory Listing
Modified Fri Jun 30 06:44:14 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
modified version of a test generator (private use)

Revision 765 - Directory Listing
Modified Fri Jun 30 06:37:11 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
The test for the contact normal has been modified to take in cosideration the fact that the normal is unique up to the factor +/-1. 
Now the test checks the kllength of the normal for 1 and the angle to the reference normal.



Revision 763 - Directory Listing
Modified Fri Jun 30 05:52:31 2006 UTC (11 years, 4 months ago) by gross
Original Path: trunk/finley
some modification in the element reordering which should solve some problems 
caused by the fact that qsort may handels == items differently on different platform.



Revision 759 - Directory Listing
Modified Thu Jun 29 01:53:23 2006 UTC (11 years, 4 months ago) by bcumming
Original Path: trunk/finley
- added directory pythonMPI to the source tree. this directory contains
  the c++ wrapper that is used to run python scripts in parallel for the
  MPI version of escript/finley
- updated the SConstruct and ./scons/ess_options.py for conditional MPI
  compilation. To compile the MPI version on ESS uncomment the #define
  PASO_MPI in ./paso/src/Paso.h and add the command line option
  useMPI=yes when running scons.
- fixed a compile time error in the MPI build in  
  finley/src/CPPAdapter/MeshAdapterFactory.cpp 
     


Revision 757 - Directory Listing
Modified Mon Jun 26 13:12:56 2006 UTC (11 years, 5 months ago) by woo409
Original Path: trunk/finley
+ Merge of intelc_win32 branch (revision 741:755) with trunk. Tested on iVEC altix (run_tests and py_tests all pass)


Revision 751 - Directory Listing
Modified Mon Jun 26 01:46:34 2006 UTC (11 years, 5 months ago) by bcumming
Original Path: trunk/finley
Changes relating to the MPI version of escript
The standard OpenMP version of escript is unchanged

- updated data types (Finley_Mesh, Finley_NodeFile, etc) to store meshes
  over multiple MPI processes.
- added CommBuffer code in Paso for communication of Data associated
  with distributed meshes
- updates in Finley and Escript to support distributed data and operations
  on distributed data (such as interpolation).
- construction of RHS in MPI, so that simple explicit schemes (such as
  /docs/examples/wave.py without IO and the Locator) can run in MPI.
- updated mesh generation for first order line, rectangle and brick
  meshes and second order line meshes in MPI.        
- small changes to trunk/SConstruct and trunk/scons/ess_options.py to
  build the MPI version, these changes are turned off by default.


Revision 731 - Directory Listing
Modified Mon May 15 04:09:52 2006 UTC (11 years, 6 months ago) by bcumming
Original Path: trunk/finley


Revision 730 - Directory Listing
Modified Mon May 15 04:03:49 2006 UTC (11 years, 6 months ago) by bcumming
Original Path: trunk/finley


Revision 727 - Directory Listing
Modified Fri May 12 06:31:06 2006 UTC (11 years, 6 months ago) by gross
Original Path: trunk/finley
In case of an error in paso a seg fault occured. this was caused by
inproper deallocation of memory in this case. this problem is fixed now.



Revision 720 - Directory Listing
Modified Thu Apr 27 10:16:05 2006 UTC (11 years, 6 months ago) by gross
Original Path: trunk/finley
formatting errors in epydoc tags fixed

Revision 714 - Directory Listing
Modified Thu Apr 27 05:42:33 2006 UTC (11 years, 6 months ago) by elspeth
Original Path: trunk/finley
Fixed python test

Revision 709 - Directory Listing
Modified Wed Apr 26 06:35:36 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
fixes to get scons py_tests going: mainly fixes in the pathes

Revision 707 - Directory Listing
Modified Wed Apr 12 23:58:02 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
latex build documentation is working now

Revision 706 - Directory Listing
Modified Sat Apr 8 16:13:02 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
python tests compile and run but there is still a problem with dependencies'


Revision 705 - Directory Listing
Modified Fri Apr 7 17:57:37 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
python tests are allmost working

Revision 703 - Directory Listing
Modified Thu Apr 6 02:20:47 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
some missing files

Revision 700 - Directory Listing
Modified Thu Apr 6 00:13:40 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
A few changes in the build mechanism and the file structure so scons can build release tar files:

  * paso/src/Solver has been moved to paso/src 
  * all test_.py are now run_.py files and are assumed to be passing python tests. they can run by 
    scons py_tests and are part of the release test set
  * escript/py_src/test_ are moved to escript/test/python and are installed in to the build directory 
    (rather then the PYTHONPATH).
  * all py files in test/python which don't start with run_ or test_ are now 'local_py_tests'. they are installed i
    by not run automatically.
  * CppUnitTest is now treated as a escript module (against previous decisions).
  * scons realse builds nor tar/zip files with relvant source code (src and tests in seperate files)

the python tests don't pass yet due to path problems.



Revision 699 - Directory Listing
Modified Fri Mar 31 06:27:56 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
now float**Data is running

Revision 698 - Directory Listing
Modified Fri Mar 31 04:52:55 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
test with tagged data pass now

Revision 692 - Directory Listing
Modified Thu Mar 30 08:05:02 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
test with tagged data still fail and switched off

Revision 690 - Directory Listing
Modified Tue Mar 28 07:18:51 2006 UTC (11 years, 7 months ago) by robwdcock
Original Path: trunk/finley
+ Added basic_py_tests target which will run the basic set of python tests. The list of python tests was taken from autoscons


Revision 687 - Directory Listing
Modified Mon Mar 27 22:17:32 2006 UTC (11 years, 7 months ago) by gross
Original Path: trunk/finley
small fixes

Revision 682 - Directory Listing
Modified Mon Mar 27 02:43:09 2006 UTC (11 years, 8 months ago) by robwdcock
Original Path: trunk/finley
+ NEW BUILD SYSTEM

This commit contains the new build system with cross-platform support.
Most things work are before though you can have more control.

ENVIRONMENT settings have changed:
+ You no longer require LD_LIBRARY_PATH or PYTHONPATH to point to the
esysroot for building and testing performed via scons
+ ACcESS altix users: It is recommended you change your modules to load
the latest intel compiler and other libraries required by boost to match
the setup in svn (you can override). The correct modules are as follows

module load intel_cc.9.0.026
export
MODULEPATH=${MODULEPATH}:/data/raid2/toolspp4/modulefiles/gcc-3.3.6
module load boost/1.33.0/python-2.4.1
module load python/2.4.1
module load numarray/1.3.3



Revision 643 - Directory Listing
Modified Fri Mar 24 00:28:41 2006 UTC (11 years, 8 months ago) by elspeth
Original Path: trunk/finley
More copyright info added.


Revision 637 - Directory Listing
Modified Thu Mar 23 10:55:31 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
more copyright statements added

Revision 626 - Directory Listing
Modified Thu Mar 23 02:16:36 2006 UTC (11 years, 8 months ago) by elspeth
Original Path: trunk/finley
Copyright information inserted


Revision 620 - Directory Listing
Modified Wed Mar 22 07:43:42 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
problem with tagged data isolated

Revision 618 - Directory Listing
Modified Wed Mar 22 04:02:38 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
mmio moced to paso

Revision 617 - Directory Listing
Modified Wed Mar 22 02:58:17 2006 UTC (11 years, 8 months ago) by elspeth
Original Path: trunk/finley
More copyright.


Revision 616 - Directory Listing
Modified Wed Mar 22 02:46:56 2006 UTC (11 years, 8 months ago) by elspeth
Original Path: trunk/finley
Copyright added to more source files.


Revision 602 - Directory Listing
Modified Fri Mar 17 06:57:46 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
more work on pyvisi integration

Revision 595 - Directory Listing
Modified Tue Mar 14 23:52:45 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
test_utilOnFinley fixed (did run the tests that still fail)

Revision 590 - Directory Listing
Modified Fri Mar 10 06:29:14 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
all tests activated

Revision 589 - Directory Listing
Modified Fri Mar 10 06:28:35 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
my little test generator

Revision 584 - Directory Listing
Modified Thu Mar 9 23:03:38 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
eigenvalues: compiles and passes tests on altix now

Revision 580 - Directory Listing
Modified Wed Mar 8 05:45:51 2006 UTC (11 years, 8 months ago) by gross
Original Path: trunk/finley
faster version of the local eigenvalue calculation

Revision 558 - Directory Listing
Modified Thu Feb 23 01:02:31 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
switch back to test on no tagged data

Revision 553 - Directory Listing
Modified Wed Feb 22 04:01:21 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
tests for tagged data

Revision 552 - Directory Listing
Modified Wed Feb 22 03:18:07 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
and more work on saving the element jacobians (please don;t look at the code)

Revision 550 - Directory Listing
Modified Wed Feb 22 02:14:38 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
more tests on slicing

Revision 547 - Directory Listing
Modified Tue Feb 21 06:10:54 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
solution and reduced solution can have reference numbers now!

Revision 532 - Directory Listing
Modified Wed Feb 15 09:45:53 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
first steps towards the reuse of the element jacobians

Revision 526 - Directory Listing
Modified Tue Feb 14 06:56:33 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
pdetools test added

Revision 521 - Directory Listing
Modified Tue Feb 14 05:50:56 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
now done test_utilOnFinley.py

Revision 491 - Directory Listing
Modified Thu Feb 2 08:21:10 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
small  bug fixed

Revision 484 - Directory Listing
Modified Thu Feb 2 02:12:08 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
add remainder of includes to SConscript includes install

Revision 481 - Directory Listing
Modified Wed Feb 1 05:57:50 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
add mechanism to install .h files to inc directories
(still need to specify full lists of .h files to install)


Revision 480 - Directory Listing
Modified Wed Feb 1 05:15:12 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
rationalise #includes and forward declarations


Revision 479 - Directory Listing
Modified Wed Feb 1 04:36:53 2006 UTC (11 years, 9 months ago) by gross
Original Path: trunk/finley
a few more benchmarks added

Revision 474 - Directory Listing
Modified Mon Jan 30 04:23:44 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
restructure escript source tree
move src/Data/* -> src
remove inc
modify #includes and cpppath settings accordingly


Revision 473 - Directory Listing
Modified Fri Jan 27 01:59:09 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
make adjustments to allow for new source tree structure


Revision 472 - Directory Listing
Modified Fri Jan 27 01:50:59 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
rationalise all #includes


Revision 471 - Directory Listing
Modified Fri Jan 27 01:33:02 2006 UTC (11 years, 9 months ago) by jgs
Original Path: trunk/finley
reorganise finley src tree to remove inc dir and src/finley directory


Revision 468 - Directory Listing
Modified Wed Jan 25 06:50:39 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
reorganised esysUtils to remove inc directory

Revision 467 - Directory Listing
Modified Wed Jan 25 05:43:46 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
adjustments to includes to allow for new paso src tree structure

Revision 464 - Directory Listing
Modified Wed Jan 25 00:42:41 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
typo fixed: the anisotropic problems are returneing the correct answer now.

Revision 461 - Directory Listing
Modified Wed Jan 25 00:01:12 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
systems benchmarks run now

Revision 460 - Directory Listing
Modified Tue Jan 24 07:53:39 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
some mopre problems added

Revision 459 - Directory Listing
Modified Tue Jan 24 07:51:02 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
some mopre problems added

Revision 457 - Directory Listing
Modified Tue Jan 24 06:13:03 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
fix installation to directories specified by pyinstall and libinstall


Revision 455 - Directory Listing
Modified Tue Jan 24 04:36:54 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
minor comment and formatting changes


Revision 454 - Directory Listing
Modified Tue Jan 24 01:34:31 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
replace libdir default settings - SConstruct was broken without them


Revision 453 - Directory Listing
Modified Tue Jan 24 01:23:28 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
reset the solver

Revision 452 - Directory Listing
Modified Mon Jan 23 23:48:50 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
iter_max increased

Revision 450 - Directory Listing
Modified Mon Jan 23 05:04:45 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
remove old make based build system


Revision 449 - Directory Listing
Modified Mon Jan 23 03:48:51 2006 UTC (11 years, 10 months ago) by jgs
Original Path: trunk/finley
finley source directories now merged into one directory: src/finley


Revision 448 - Directory Listing
Modified Mon Jan 23 03:04:06 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
small typy fixed

Revision 447 - Directory Listing
Modified Mon Jan 23 02:59:59 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
a simple linear elastic solver

Revision 446 - Directory Listing
Modified Mon Jan 23 00:36:07 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
typo fixed

Revision 443 - Directory Listing
Modified Fri Jan 20 06:22:38 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
L2 function added

Revision 442 - Directory Listing
Modified Fri Jan 20 04:39:43 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
kronecker (and relatives) take now a FunctionSpace as argument and return a Data object in tthis functionspace

Revision 437 - Directory Listing
Modified Fri Jan 20 00:16:58 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
comprehensive testing for integrate function added. tests for grad will be added in the next check in. GradTest is obsolete now.

Revision 435 - Directory Listing
Modified Thu Jan 19 03:57:30 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
minor change

Revision 432 - Directory Listing
Modified Fri Jan 13 07:38:54 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
some fixes for openmp

Revision 431 - Directory Listing
Modified Fri Jan 13 05:07:10 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
new implementation of ILU0

Revision 430 - Directory Listing
Modified Wed Jan 11 06:40:50 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
ILU has been replicated is called RILU (recursive ILU) now. ILU will now be reimplemented.

Revision 428 - Directory Listing
Modified Wed Jan 11 01:38:16 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
interplotared is changed from method to function call

Revision 425 - Directory Listing
Modified Tue Jan 10 04:10:39 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
The sparse solver can be called by paso now. 

the building has been change to reduce some code redundancy:
now all scons SCscripts are importing scons/esys_options.py which
imports platform specific settings. 




Revision 423 - Directory Listing
Modified Fri Jan 6 08:09:43 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
some modifications in visualization to get equidistant output

Revision 416 - Directory Listing
Modified Wed Jan 4 05:38:35 2006 UTC (11 years, 10 months ago) by gross
Original Path: trunk/finley
changes in Paso have been worked in

Revision 404 - Directory Listing
Modified Thu Dec 22 23:04:55 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
direct solver works for symmetry flag now

Revision 402 - Directory Listing
Modified Thu Dec 22 22:46:54 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
cut of for small values

Revision 399 - Directory Listing
Modified Wed Dec 21 22:43:48 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
frame to run a single test out of the test_util suite

Revision 389 - Directory Listing
Modified Tue Dec 20 03:17:28 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
Laplace benchmarks added

Revision 388 - Directory Listing
Modified Tue Dec 20 03:13:17 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
laplace benchmarks added

Revision 384 - Directory Listing
Modified Mon Dec 19 06:11:32 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
finleybench is build now

Revision 383 - Directory Listing
Modified Mon Dec 19 06:10:45 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
Finley options added plus some other stuff

Revision 382 - Directory Listing
Modified Mon Dec 19 06:09:49 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
run finley benchmark

Revision 381 - Directory Listing
Modified Mon Dec 19 03:15:44 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
first version of a finley benchmark suite for test the paso solver

Revision 362 - Directory Listing
Modified Thu Dec 15 02:07:55 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
removed unit-test runner scripts as unit-tests now run from scons

Revision 360 - Directory Listing
Modified Thu Dec 15 01:52:16 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
add target to run all unit tests, the build will fail
for this target if any unit test fails


Revision 355 - Directory Listing
Modified Wed Dec 14 05:05:31 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
add explicit target for building of unit tests


Revision 352 - Directory Listing
Modified Wed Dec 14 02:21:37 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
turns out Install() targets should also be made Default()
targets if you want them to actually reliably work!


Revision 340 - Directory Listing
Modified Mon Dec 12 05:10:45 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
pass in pyinstall value from top-level scons script and add
correct suffix in module level scons scipr


Revision 325 - Directory Listing
Modified Wed Dec 7 02:08:17 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
now determine hostname via socket.gethostname() as HOSTNAME
environment variable is apparently not set on all platforms


Revision 324 - Directory Listing
Modified Wed Dec 7 01:10:36 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
add symlinks to include files - previously added by hand as cvs couldn't
handle them


Revision 320 - Directory Listing
Modified Tue Dec 6 04:35:27 2005 UTC (11 years, 11 months ago) by svn
Original Path: trunk/finley
unit tests now run ok

Revision 319 - Directory Listing
Modified Tue Dec 6 04:25:37 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
temporary unit tests scripts

Revision 309 - Directory Listing
Modified Mon Dec 5 01:59:58 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
now load default options - by default!


Revision 303 - Directory Listing
Modified Fri Dec 2 05:54:01 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
is now in modellib

Revision 302 - Directory Listing
Modified Fri Dec 2 05:51:51 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
runs again

Revision 301 - Directory Listing
Modified Fri Dec 2 05:49:29 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
runs again

Revision 300 - Directory Listing
Modified Fri Dec 2 05:47:17 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
runs again

Revision 299 - Directory Listing
Modified Fri Dec 2 05:45:38 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
runs again

Revision 298 - Directory Listing
Modified Fri Dec 2 05:42:11 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
runs again

Revision 296 - Directory Listing
Modified Fri Dec 2 03:55:36 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
test passes now

Revision 294 - Directory Listing
Modified Fri Dec 2 03:47:30 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
test of symbols.py with python

Revision 288 - Directory Listing
Modified Fri Dec 2 01:55:04 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
now automatically build unit tests as required based on dependencies
between unit tests and libraries


Revision 284 - Directory Listing
Modified Thu Dec 1 06:39:23 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
test are passed now

Revision 277 - Directory Listing
Modified Wed Nov 30 04:52:39 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
explicitly define dependencies between modules


Revision 273 - Directory Listing
Modified Wed Nov 30 03:30:40 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
cast to float added. this avoids problems with very small values

Revision 272 - Directory Listing
Modified Wed Nov 30 03:30:30 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
cast to float added. this avoids problems with very small coodinates.

Revision 271 - Directory Listing
Modified Wed Nov 30 03:27:30 2005 UTC (11 years, 11 months ago) by gross
Original Path: trunk/finley
cast to float added. this avoids problems with very small values

Revision 268 - Directory Listing
Modified Wed Nov 30 01:39:47 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
setup scons configuration to make and install python code


Revision 255 - Directory Listing
Modified Tue Nov 29 06:13:22 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
pass in solver libraries to link with via options files now

Revision 252 - Directory Listing
Modified Tue Nov 29 05:58:03 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
pass in platform specific libraries via options files now


Revision 249 - Directory Listing
Modified Tue Nov 29 05:29:09 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
fix compiler options to enable compilation on gcc platforms

Revision 248 - Directory Listing
Modified Tue Nov 29 04:58:23 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
add top level scons config files to allow building
of all unit tests for each module at once


Revision 246 - Directory Listing
Modified Tue Nov 29 04:27:00 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
allow compile options to be loaded from a config
file specified on the command line to scons


Revision 241 - Directory Listing
Modified Mon Nov 28 06:14:47 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
if usegcc=1 is set on command line, load compiler options
fropm scons/gcc_options.py


Revision 239 - Directory Listing
Modified Mon Nov 28 05:49:32 2005 UTC (11 years, 11 months ago) by jgs
Original Path: trunk/finley
read names of python and boost libraries from config file now


Revision 228 - Directory Listing
Modified Fri Nov 25 02:01:14 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
now read compile options from options file


Revision 224 - Directory Listing
Modified Fri Nov 25 00:33:27 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
implement switching of debug compiler options based on command line flag 'debug'

Revision 223 - Directory Listing
Modified Thu Nov 24 23:12:13 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
pass in cc/cxx settings from config file

Revision 217 - Directory Listing
Modified Thu Nov 24 06:48:50 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
import sys

Revision 216 - Directory Listing
Modified Thu Nov 24 06:35:14 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
first pass at importing compile options from an external file'


Revision 214 - Directory Listing
Modified Thu Nov 24 05:15:26 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
collect all information needed to determine build
configuration (ie: debug/nodebug, host, platform etc)


Revision 211 - Directory Listing
Modified Thu Nov 24 00:29:23 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
removed


Revision 208 - Directory Listing
Modified Wed Nov 23 05:08:45 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
?


Revision 206 - Directory Listing
Modified Wed Nov 23 05:03:42 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
remove MeshAdapter test for now - will only work with scons build system


Revision 205 - Directory Listing
Modified Wed Nov 23 05:02:59 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
fix settings to account for new finley source tree structure


Revision 204 - Directory Listing
Modified Wed Nov 23 04:43:51 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
revised scons files to account for new finley source tree structure


Revision 203 - Directory Listing
Modified Wed Nov 23 04:36:15 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
adjust include file names to allow for new finley source tree structure


Revision 202 - Directory Listing
Modified Wed Nov 23 04:18:39 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
scons builds will now take place in parallel "finley" src dir


Revision 201 - Directory Listing
Modified Wed Nov 23 04:10:21 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
copy finleyC and CPPAdapter to finley and finley/CPPAdapter to
facilitate scons builds


Revision 192 - Directory Listing
Modified Mon Nov 21 04:52:14 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
pass in top level install directory for finley/escript/bruce/paso
libraries when building via top level scons script


Revision 191 - Directory Listing
Modified Mon Nov 21 04:10:12 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
push platform dependent compiler flags and include directories up to library level scons files - these will eventually be brought in from external config files

Revision 190 - Directory Listing
Modified Mon Nov 21 03:27:42 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
pass in value for esysroot and use this to determine include file locations

Revision 188 - Directory Listing
Modified Mon Nov 21 01:20:26 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
explicitly add -fpic option to all compiler options lists
to ensure relocatable code is generated


Revision 183 - Directory Listing
Modified Fri Nov 18 05:24:37 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
can now build finleyC/finleycpp concurrently


Revision 182 - Directory Listing
Modified Fri Nov 18 05:07:36 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
first draft of config/construct files for finleyC/finleycpp libraries


Revision 155 - Directory Listing
Modified Wed Nov 9 02:02:19 2005 UTC (12 years ago) by jgs
Original Path: trunk/finley
Copied from: trunk/esys2/finley revision 154
move all directories from trunk/esys2 into trunk and remove esys2


Revision 154 - Directory Listing
Modified Mon Nov 7 05:51:17 2005 UTC (12 years ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-11-07


Revision 153 - Directory Listing
Modified Tue Oct 25 01:51:20 2005 UTC (12 years, 1 month ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-10-25


Revision 152 - Directory Listing
Modified Fri Oct 21 08:32:21 2005 UTC (12 years, 1 month ago) by phornby
Original Path: trunk/esys2/finley
DataConstantTestCase.cpp, DataExpandedTestCase.cpp:

Replace

DataExpanded testData1(FunctionSpace(),....)

with

FunctionSpace tmp_fns;
DataExpanded testData1(tmp_fns,shape,data);

for GCC's sake.




Added some profiling to PoissonSolverTest.py.


Revision 151 - Directory Listing
Modified Thu Sep 22 01:55:00 2005 UTC (12 years, 2 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-09-22


Revision 150 - Directory Listing
Modified Thu Sep 15 03:44:45 2005 UTC (12 years, 2 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-09-15


Revision 149 - Directory Listing
Modified Thu Sep 1 03:31:39 2005 UTC (12 years, 2 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-09-01


Revision 148 - Directory Listing
Modified Tue Aug 23 01:24:31 2005 UTC (12 years, 3 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch dev-02 back to main trunk on 2005-08-23


Revision 147 - Directory Listing
Modified Fri Aug 12 01:45:47 2005 UTC (12 years, 3 months ago) by jgs
Original Path: trunk/esys2/finley
erge of development branch dev-02 back to main trunk on 2005-08-12


Revision 146 - Directory Listing
Modified Fri Jul 29 01:44:29 2005 UTC (12 years, 3 months ago) by jgs
Original Path: trunk/esys2/finley
First merge of development branch dev-02 back to main trunk on 2005-07-29


Revision 141 - Directory Listing
Modified Mon Jul 25 05:15:41 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
fixed to work with new python source/install directory structure


Revision 140 - Directory Listing
Modified Mon Jul 25 00:08:42 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
add __init__.pyc to install list


Revision 139 - Directory Listing
Modified Mon Jul 25 00:05:12 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
python init file for finley module


Revision 137 - Directory Listing
Modified Fri Jul 22 07:07:20 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
removed all references to modellib module


Revision 126 - Directory Listing
Modified Fri Jul 22 03:53:08 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch back to main trunk on 2005-07-22


Revision 123 - Directory Listing
Modified Fri Jul 8 04:08:13 2005 UTC (12 years, 4 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch back to main trunk on 2005-07-08


Revision 122 - Directory Listing
Modified Thu Jun 9 05:38:05 2005 UTC (12 years, 5 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch back to main trunk on 2005-06-09


Revision 121 - Directory Listing
Modified Fri May 6 04:26:16 2005 UTC (12 years, 6 months ago) by jgs
Original Path: trunk/esys2/finley
Merge of development branch back to main trunk on 2005-05-06


Revision 119 - Directory Listing
Modified Tue Apr 12 04:45:05 2005 UTC (12 years, 7 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 117 - Directory Listing
Modified Fri Apr 1 05:48:57 2005 UTC (12 years, 7 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 115 - Directory Listing
Modified Fri Mar 4 07:12:47 2005 UTC (12 years, 8 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 113 - Directory Listing
Modified Mon Feb 28 07:06:33 2005 UTC (12 years, 8 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 110 - Directory Listing
Modified Mon Feb 14 04:14:42 2005 UTC (12 years, 9 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 108 - Directory Listing
Modified Thu Jan 27 06:21:59 2005 UTC (12 years, 9 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 104 - Directory Listing
Modified Fri Dec 17 07:43:12 2004 UTC (12 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 102 - Directory Listing
Modified Wed Dec 15 07:08:39 2004 UTC (12 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 100 - Directory Listing
Modified Wed Dec 15 03:48:48 2004 UTC (12 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 97 - Directory Listing
Modified Tue Dec 14 05:39:33 2004 UTC (12 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 84 - Directory Listing
Modified Tue Oct 26 23:51:56 2004 UTC (13 years ago) by jgs
Original Path: trunk/esys2/finley
*** empty log message ***


Revision 82 - Directory Listing
Added Tue Oct 26 06:53:54 2004 UTC (13 years, 1 month ago) by jgs
Original Path: trunk/esys2/finley
Initial revision


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