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Revision 5933 - (view) (annotate) - [select for diffs]
Modified Wed Feb 17 23:53:30 2016 UTC (21 months, 3 weeks ago) by caltinay
File length: 11255 byte(s)
Diff to previous 5898
sync with trunk.


Revision 5898 - (view) (annotate) - [select for diffs]
Modified Fri Feb 5 03:37:49 2016 UTC (22 months, 1 week ago) by caltinay
File length: 10611 byte(s)
Diff to previous 5863
trilinos playground


Revision 5863 - (view) (annotate) - [select for diffs]
Modified Wed Jan 13 02:25:48 2016 UTC (23 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10611 byte(s)
Diff to previous 5593
Copyright dates updated.
\version for doxygen to read


Revision 5593 - (view) (annotate) - [select for diffs]
Modified Fri Apr 24 01:36:26 2015 UTC (2 years, 7 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10611 byte(s)
Diff to previous 5448
Fixing institution name to comply with policy

Revision 5448 - (view) (annotate) - [select for diffs]
Modified Fri Feb 6 05:31:37 2015 UTC (2 years, 10 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10607 byte(s)
Diff to previous 4934
Updating all the dates

Revision 4934 - (view) (annotate) - [select for diffs]
Modified Tue May 13 00:28:11 2014 UTC (3 years, 7 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10607 byte(s)
Diff to previous 4873
This commit is brought to you by the number 4934 and the tool "meld".
Merge of partially complete split world code from branch.




Revision 4873 - (view) (annotate) - [select for diffs]
Modified Wed Apr 16 06:38:51 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10596 byte(s)
Diff to previous 4869
whitespace only changes.


Revision 4869 - (view) (annotate) - [select for diffs]
Modified Mon Apr 14 10:39:22 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10602 byte(s)
Diff to previous 4849
all of paso now lives in its own namespace.


Revision 4849 - (view) (annotate) - [select for diffs]
Modified Wed Apr 9 02:14:58 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10678 byte(s)
Diff to previous 4846
More vacuuming.


Revision 4846 - (view) (annotate) - [select for diffs]
Modified Tue Apr 8 23:55:38 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10446 byte(s)
Diff to previous 4836
paso::Options.


Revision 4836 - (view) (annotate) - [select for diffs]
Modified Mon Apr 7 05:51:55 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 10451 byte(s)
Diff to previous 4829
"Some" SystemMatrix clean up.....


Revision 4829 - (view) (annotate) - [select for diffs]
Modified Thu Apr 3 04:02:53 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8602 byte(s)
Diff to previous 4819
checkpointing some SparseMatrix cleanup.


Revision 4819 - (view) (annotate) - [select for diffs]
Modified Tue Apr 1 03:50:23 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8650 byte(s)
Diff to previous 4818
Pattern shared ptrs


Revision 4818 - (view) (annotate) - [select for diffs]
Modified Mon Mar 31 00:16:20 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8656 byte(s)
Diff to previous 4817
SystemMatrixPattern shptr


Revision 4817 - (view) (annotate) - [select for diffs]
Modified Fri Mar 28 08:04:09 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8653 byte(s)
Diff to previous 4814
Coupler/Connector shared ptrs.


Revision 4814 - (view) (annotate) - [select for diffs]
Modified Fri Mar 28 04:31:02 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8647 byte(s)
Diff to previous 4801
paso::Distribution instances are now managed by a boost::shared_ptr, methods
are all inline.


Revision 4801 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 03:26:58 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8737 byte(s)
Diff to previous 4800
paso::Coupler and paso::Connector.


Revision 4800 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 01:50:04 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8799 byte(s)
Diff to previous 4797
paso::SystemMatrixPattern


Revision 4797 - (view) (annotate) - [select for diffs]
Modified Mon Mar 24 05:42:42 2014 UTC (3 years, 8 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8797 byte(s)
Diff to previous 4657
put SparseMatrix into paso namespace, accompanied by minor code cleanup.


Revision 4657 - (view) (annotate) - [select for diffs]
Modified Thu Feb 6 06:12:20 2014 UTC (3 years, 10 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8793 byte(s)
Diff to previous 4521
I changed some files.
Updated copyright notices, added GeoComp.




Revision 4521 - (view) (annotate) - [select for diffs]
Modified Mon Aug 26 11:51:30 2013 UTC (4 years, 3 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8725 byte(s)
Diff to previous 4154
Remove bool_t
Part of random.



Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (4 years, 10 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8737 byte(s)
Diff to previous 3981
Round 1 of copyright fixes

Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (5 years, 2 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8737 byte(s)
Diff to previous 3911
First pass of updating copyright notices

Revision 3911 - (view) (annotate) - [select for diffs]
Modified Thu Jun 14 01:01:03 2012 UTC (5 years, 6 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8530 byte(s)
Diff to previous 3827
Copyright changes

Revision 3827 - (view) (annotate) - [select for diffs]
Modified Tue Feb 14 11:42:08 2012 UTC (5 years, 10 months ago) by lgao
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8530 byte(s)
Diff to previous 3642
 Merge branch "amg_from_3530" back into trunk.



Revision 3642 - (view) (annotate) - [select for diffs]
Modified Thu Oct 27 03:41:51 2011 UTC (6 years, 1 month ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8198 byte(s)
Diff to previous 3594
Assorted spelling/comment fixes in paso.


Revision 3594 - (view) (annotate) - [select for diffs]
Modified Thu Sep 15 00:45:04 2011 UTC (6 years, 3 months ago) by caltinay
Original Path: trunk/paso/src/SystemMatrix.h
File length: 8196 byte(s)
Diff to previous 3508
Added missing declspecs in paso. Thanks Terry.


Revision 3508 - (view) (annotate) - [select for diffs]
Modified Fri May 13 04:15:29 2011 UTC (6 years, 7 months ago) by lgao
Original Path: trunk/paso/src/SystemMatrix.h
File length: 7414 byte(s)
Diff to previous 3482
Add Boomer AMG as a new preconditioner 
Can be used by .setPreconditioner(SolverOptions.BOOMERAMG)
and the following parallel coarsening method can be 
used together with Boomer AMG preconditioner: 
  .setCoarsening(SolverOptions.CIJP_FIXED_RANDOM_COARSENING)
  .setCoarsening(SolverOptions.CIJP_COARSENING)
  .setCoarsening(SolverOptions.FALGOUT_COARSENING)
  .setCoarsening(SolverOptions.PMIS_COARSENING)
  .setCoarsening(SolverOptions.HMIS_COARSENING)

Note that Boomer AMG is only available when MPI is enabled.  



Revision 3482 - (view) (annotate) - [select for diffs]
Modified Wed Mar 23 04:06:52 2011 UTC (6 years, 8 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 6927 byte(s)
Diff to previous 3458
some work on AMG MPI

Revision 3458 - (view) (annotate) - [select for diffs]
Modified Mon Jan 31 07:06:42 2011 UTC (6 years, 10 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 6628 byte(s)
Diff to previous 3445
more on AMG under MPI

Revision 3445 - (view) (annotate) - [select for diffs]
Modified Wed Jan 19 06:02:15 2011 UTC (6 years, 10 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 6424 byte(s)
Diff to previous 3442
more work towards MPI AMG

Revision 3442 - (view) (annotate) - [select for diffs]
Modified Tue Jan 18 01:47:36 2011 UTC (6 years, 10 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 6160 byte(s)
Diff to previous 3369
 emeregncy

Revision 3369 - (view) (annotate) - [select for diffs]
Modified Fri Nov 19 06:26:11 2010 UTC (7 years ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5864 byte(s)
Diff to previous 3303
matrix balance introduced in paso

Revision 3303 - (view) (annotate) - [select for diffs]
Modified Mon Oct 25 04:33:31 2010 UTC (7 years, 1 month ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5461 byte(s)
Diff to previous 3283
more clean up work on the AMG

Revision 3283 - (view) (annotate) - [select for diffs]
Modified Mon Oct 18 22:39:28 2010 UTC (7 years, 1 month ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5649 byte(s)
Diff to previous 3259
AMG reengineered, BUG is Smoother fixed.



Revision 3259 - (view) (annotate) - [select for diffs]
Modified Mon Oct 11 01:48:14 2010 UTC (7 years, 2 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5647 byte(s)
Diff to previous 3120
Merging dudley and scons updates from branches


Revision 3120 - (view) (annotate) - [select for diffs]
Modified Mon Aug 30 10:48:00 2010 UTC (7 years, 3 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5637 byte(s)
Diff to previous 3094
first iteration on Paso code clean up

Revision 3094 - (view) (annotate) - [select for diffs]
Modified Fri Aug 13 08:38:06 2010 UTC (7 years, 4 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5399 byte(s)
Diff to previous 3005
The MPI and sequational GAUSS_SEIDEL have been merged.
The couring and main diagonal pointer is now manged by the patternm which means that they are calculated once only even if the preconditioner is deleted.




Revision 3005 - (view) (annotate) - [select for diffs]
Modified Thu Apr 22 05:59:31 2010 UTC (7 years, 7 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5398 byte(s)
Diff to previous 2970
early call of setPreconditioner in FCT solver removed.

Revision 2970 - (view) (annotate) - [select for diffs]
Modified Wed Mar 3 05:23:50 2010 UTC (7 years, 9 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5037 byte(s)
Diff to previous 2881
Fix out of date comment


Revision 2881 - (view) (annotate) - [select for diffs]
Modified Thu Jan 28 02:03:15 2010 UTC (7 years, 10 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5071 byte(s)
Diff to previous 2608
Don't panic.
Updating copyright stamps


Revision 2608 - (view) (annotate) - [select for diffs]
Modified Tue Aug 18 01:25:18 2009 UTC (8 years, 3 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5071 byte(s)
Diff to previous 2551
Updating Lutz' email


Revision 2551 - (view) (annotate) - [select for diffs]
Modified Thu Jul 23 09:19:15 2009 UTC (8 years, 4 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5061 byte(s)
Diff to previous 2548
a problem with the sparse matrix unrolling fixed.

Revision 2548 - (view) (annotate) - [select for diffs]
Modified Mon Jul 20 06:20:06 2009 UTC (8 years, 4 months ago) by jfenwick
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5054 byte(s)
Diff to previous 2315
Updating copyright notices

Revision 2315 - (view) (annotate) - [select for diffs]
Modified Wed Mar 18 00:38:48 2009 UTC (8 years, 9 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5054 byte(s)
Diff to previous 2168
fixes for MPI

Revision 2168 - (view) (annotate) - [select for diffs]
Modified Wed Dec 17 00:50:37 2008 UTC (9 years ago) by artak
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5030 byte(s)
Diff to previous 2107
methods are added for loading right-hand-side from MM format

Revision 2107 - (view) (annotate) - [select for diffs]
Modified Fri Nov 28 04:39:07 2008 UTC (9 years ago) by artak
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4960 byte(s)
Diff to previous 2072
Current version of AMG uses ILU for relaxation, however it is not stable when schur matrix becames more denser. For example it is not stable for -e paramenter is more 400 in 2D for convection problem 

Revision 2072 - (view) (annotate) - [select for diffs]
Modified Thu Nov 20 10:40:19 2008 UTC (9 years ago) by phornby
Original Path: trunk/paso/src/SystemMatrix.h
File length: 5394 byte(s)
Diff to previous 1859
More PASO_DLL_API declarations for externally called routines.



Revision 1859 - (view) (annotate) - [select for diffs]
Modified Wed Oct 8 03:03:37 2008 UTC (9 years, 2 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4960 byte(s)
Diff to previous 1811
first version of testing for transport solver.

Revision 1811 - (view) (annotate) - [select for diffs]
Modified Thu Sep 25 23:11:13 2008 UTC (9 years, 2 months ago) by ksteube
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4912 byte(s)
Diff to previous 1639
Copyright updated in all files


Revision 1639 - (view) (annotate) - [select for diffs]
Modified Mon Jul 14 08:55:25 2008 UTC (9 years, 5 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4947 byte(s)
Diff to previous 1562


Revision 1562 - (view) (annotate) - [select for diffs]
Modified Wed May 21 13:04:40 2008 UTC (9 years, 6 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4899 byte(s)
Diff to previous 1552
The algebraic upwinding with MPI. The case of boundary constraint needs still some attention. 



Revision 1552 - (view) (annotate) - [select for diffs]
Modified Thu May 8 08:52:41 2008 UTC (9 years, 7 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4916 byte(s)
Diff to previous 1425
some changes to make the implementatiopn of a upwind MPI version easier

Revision 1425 - (view) (annotate) - [select for diffs]
Modified Wed Feb 27 06:12:04 2008 UTC (9 years, 9 months ago) by artak
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4403 byte(s)
Diff to previous 1417
Added new test for BiCGStab in run_simplesolve.py
algorithmic change in BICGSTAB: from r=r-wt to r=s-wt


Revision 1417 - (view) (annotate) - [select for diffs]
Modified Mon Feb 25 04:45:48 2008 UTC (9 years, 9 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4326 byte(s)
Diff to previous 1407
some more work on the transport solver.

Revision 1407 - (view) (annotate) - [select for diffs]
Modified Mon Feb 4 06:45:48 2008 UTC (9 years, 10 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4222 byte(s)
Diff to previous 1388
new upwinding algorithm (still fails)

Revision 1388 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:58 2008 UTC (9 years, 11 months ago) by trankine
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4204 byte(s)
Diff to previous 1387
And get the *(&(*&(* name right

Revision 1387 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:26 2008 UTC (9 years, 11 months ago) by trankine
Original Path: temp/paso/src/SystemMatrix.h
File length: 4204 byte(s)
Diff to previous 1384
Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

Revision 1384 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 02:29:38 2008 UTC (9 years, 11 months ago) by phornby
Original Path: temp_trunk_copy/paso/src/SystemMatrix.h
File length: 4204 byte(s)
Diff to previous 1363
Make a temp copy of the trunk before checking in the windows changes



Revision 1363 - (view) (annotate) - [select for diffs]
Modified Mon Dec 17 03:42:03 2007 UTC (10 years ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4204 byte(s)
Diff to previous 1361
initialization for FCT solver added.

Revision 1361 - (view) (annotate) - [select for diffs]
Modified Fri Dec 14 09:26:51 2007 UTC (10 years ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4134 byte(s)
Diff to previous 1312
first steps towards a flux controlled transport solver.

Revision 1312 - (view) (annotate) - [select for diffs]
Modified Mon Sep 24 06:18:44 2007 UTC (10 years, 2 months ago) by ksteube
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4075 byte(s)
Diff to previous 1028
The MPI branch is hereby closed. All future work should be in trunk.

Previously in revision 1295 I merged the latest changes to trunk into trunk-mpi-branch.
In this revision I copied all files from trunk-mpi-branch over the corresponding
trunk files. I did not use 'svn merge', it was a copy.


Revision 1028 - (view) (annotate) - [select for diffs]
Modified Wed Mar 14 00:15:24 2007 UTC (10 years, 9 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4469 byte(s)
Diff to previous 971
modifications to be compliant with _WIN32. The substitutes for asinh, acosh, atanh are still missing (erf will through an exception)

Revision 971 - (view) (annotate) - [select for diffs]
Modified Wed Feb 14 04:40:49 2007 UTC (10 years, 10 months ago) by ksteube
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4520 byte(s)
Diff to previous 969
Had to undo commit to new MPI branch. The changes went into the original and
not the branch. The files committed here are exactly the same as revision 969.



Revision 969 - (view) (annotate) - [select for diffs]
Modified Tue Feb 13 23:02:23 2007 UTC (10 years, 10 months ago) by ksteube
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4426 byte(s)
Diff to previous 790
Parallelization using MPI for solution of implicit problems.

Parallelization for explicit problems has already been accomplished in
the main SVN branch.

This is incomplete and is not ready for use.



Revision 790 - (view) (annotate) - [select for diffs]
Modified Wed Jul 26 23:12:34 2006 UTC (11 years, 4 months ago) by bcumming
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4520 byte(s)
Diff to previous 633
changes to escript/py_src/pdetools.py and /escript/src/Data.h/.cpp to
make the Locator work in MPI. escript::Data::mindp now returns a 3 tuple,
with the MPI rank of the process on which the minimum value occurs
included. escript::Data::convertToNumArrayFromDPNo also takes the ProcNo
to perform the MPI reduction.

This had to be implemented in both the MPI and non-MPI versions to allow
the necesary changes to the Python code in pdetools.py. In the non-MPI
version ProcNo is set to 0. This works for the explicit scripts tested
thus far, however if it causes problems in your scripts contact Ben or
Lutz, or revert the three files (pdetools.py, Data.h and Data.cpp) to
the previous version.  



Revision 633 - (view) (annotate) - [select for diffs]
Modified Thu Mar 23 05:37:00 2006 UTC (11 years, 8 months ago) by dhawcroft
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4290 byte(s)
Diff to previous 631


Revision 631 - (view) (annotate) - [select for diffs]
Modified Thu Mar 23 04:27:32 2006 UTC (11 years, 8 months ago) by dhawcroft
Original Path: trunk/paso/src/SystemMatrix.h
File length: 4290 byte(s)
Diff to previous 425
Prepended all paso source files with new Copyright notice

Revision 425 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 04:10:39 2006 UTC (11 years, 11 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 3644 byte(s)
Diff to previous 415
The sparse solver can be called by paso now. 

the building has been change to reduce some code redundancy:
now all scons SCscripts are importing scons/esys_options.py which
imports platform specific settings. 




Revision 415 - (view) (annotate) - [select for diffs]
Modified Wed Jan 4 05:37:33 2006 UTC (11 years, 11 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 3654 byte(s)
Diff to previous 412
a better way of representing the matrix format type is introduced. this is needed for the Paradiso and UMFPACK interface

Revision 412 - (view) (annotate) - [select for diffs]
Modified Tue Jan 3 00:41:56 2006 UTC (11 years, 11 months ago) by gross
Original Path: trunk/paso/src/SystemMatrix.h
File length: 3455 byte(s)
Diff to previous 155
nicer wahy of representing the natrix format is introduced

Revision 155 - (view) (annotate) - [select for diffs]
Modified Wed Nov 9 02:02:19 2005 UTC (12 years, 1 month ago) by jgs
Original Path: trunk/paso/src/SystemMatrix.h
File length: 3231 byte(s)
Diff to previous 150
move all directories from trunk/esys2 into trunk and remove esys2


Revision 150 - (view) (annotate) - [select for diffs]
Added Thu Sep 15 03:44:45 2005 UTC (12 years, 3 months ago) by jgs
Original Path: trunk/esys2/paso/src/SystemMatrix.h
File length: 3231 byte(s)
Merge of development branch dev-02 back to main trunk on 2005-09-15


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