Log of /release/3.4.2
Directory Listing
Revision
4925 -
Directory Listing
Modified
Thu May 1 02:15:06 2014 UTC
(8 years ago)
by
jfenwick
Fixed revision on user guide
Revision
4924 -
Directory Listing
Modified
Wed Apr 30 23:27:04 2014 UTC
(8 years ago)
by
sshaw
disabling release use of fast assemblers by default
Revision
4923 -
Directory Listing
Modified
Wed Apr 30 23:10:27 2014 UTC
(8 years ago)
by
caltinay
3.4.1 -> 3.4.2
Revision
4922 -
Directory Listing
Modified
Wed Apr 30 23:06:46 2014 UTC
(8 years ago)
by
sshaw
updating release docs to show release
Revision
4919 -
Directory Listing
Modified
Wed Apr 30 06:25:55 2014 UTC
(8 years ago)
by
jfenwick
Copied from:
trunk revision 4918
Because we've got to!
Revision
4918 -
Directory Listing
Modified
Wed Apr 30 06:20:47 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
instructions for FreeBSD 10.0
Revision
4917 -
Directory Listing
Modified
Wed Apr 30 05:58:08 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
export LD_PRELOAD for tests.
added freebsd 10.0 options file.
Revision
4916 -
Directory Listing
Modified
Wed Apr 30 05:30:36 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
updating deb changelog
Revision
4915 -
Directory Listing
Modified
Wed Apr 30 05:29:23 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Fixes for macports
Revision
4914 -
Directory Listing
Modified
Wed Apr 30 04:58:45 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
removing spare 'as'
Revision
4913 -
Directory Listing
Modified
Wed Apr 30 04:57:21 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Reorder homebrew install
Revision
4912 -
Directory Listing
Modified
Wed Apr 30 04:57:01 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
update to comments and fixing of docstring
Revision
4911 -
Directory Listing
Modified
Wed Apr 30 04:43:23 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
fix unused var
Revision
4910 -
Directory Listing
Modified
Wed Apr 30 02:21:59 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
fix docstring error
Revision
4909 -
Directory Listing
Modified
Wed Apr 30 01:20:22 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
Fixed Wunused-functions picked up by g++ 4.9
Revision
4908 -
Directory Listing
Modified
Wed Apr 30 00:24:38 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
removing runmodel from /bin given it doesn't have x-permissions
Revision
4907 -
Directory Listing
Modified
Tue Apr 29 12:58:43 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
fix docstring indentation isssue for accousticwaveform
Revision
4906 -
Directory Listing
Modified
Tue Apr 29 05:27:34 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
restoring lost changes
Revision
4905 -
Directory Listing
Modified
Tue Apr 29 05:16:13 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
updated install doc
Revision
4904 -
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Modified
Tue Apr 29 04:40:30 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
removing test print
Revision
4903 -
Directory Listing
Modified
Tue Apr 29 04:12:59 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
updates for centos 6.5 install instructions
Revision
4902 -
Directory Listing
Modified
Tue Apr 29 04:07:28 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
add centos 6.5 scons option file.
Revision
4901 -
Directory Listing
Modified
Tue Apr 29 03:55:00 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Updated info about macos commandline tools to note existance of xcodebuild command.
Revision
4900 -
Directory Listing
Modified
Tue Apr 29 01:44:02 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
update sympy version check
Revision
4899 -
Directory Listing
Modified
Tue Apr 29 01:42:23 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
sympy version check
Revision
4898 -
Directory Listing
Modified
Tue Apr 29 01:03:58 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
sympy version check
Revision
4897 -
Directory Listing
Modified
Tue Apr 29 00:43:58 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
sympy version check
Revision
4896 -
Directory Listing
Modified
Tue Apr 29 00:35:22 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Added missing backslash
Corrected spelling mistake
Revision
4895 -
Directory Listing
Modified
Tue Apr 29 00:21:43 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
affected tests now skipped if pyproj not installed
Revision
4894 -
Directory Listing
Modified
Mon Apr 28 04:28:28 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
adding options for fedora 20, only changes boost_python-mt for now
Revision
4892 -
Directory Listing
Modified
Mon Apr 28 03:30:29 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
scaled down grav_netcdf test...
Revision
4891 -
Directory Listing
Modified
Mon Apr 28 03:20:38 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
some changes to user guide.
Revision
4890 -
Directory Listing
Modified
Mon Apr 28 01:24:21 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
added suggestion to copy options file from os directory.
Revision
4889 -
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Modified
Mon Apr 28 01:17:41 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
Updated warning message when no options file is provided
Revision
4888 -
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Modified
Mon Apr 28 00:52:20 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Removing manual pagebreaks
Revision
4887 -
Directory Listing
Modified
Mon Apr 28 00:34:35 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
Minor updates
Revision
4886 -
Directory Listing
Modified
Sun Apr 27 13:12:23 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
rewording and checking
Revision
4885 -
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Modified
Sun Apr 27 11:48:36 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
Small changes
Revision
4884 -
Directory Listing
Modified
Thu Apr 24 04:47:39 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
this file is added so that we can import Symbolic by doing:
import esys.escript.symbolic as symb instead of
import esys.escriptcore.symbolic as symb
the one line containined in the file is on line five for reasons prettiness
Revision
4883 -
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Modified
Thu Apr 24 00:00:33 2014 UTC
(8 years ago)
by
jfenwick
Original Path:
trunk
Updated changes list and sorted dev lists
Revision
4882 -
Directory Listing
Modified
Wed Apr 23 14:54:26 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
fixing small errors
Revision
4881 -
Directory Listing
Modified
Wed Apr 23 14:20:28 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
grammar, spelling and formating changes.
Revision
4880 -
Directory Listing
Modified
Wed Apr 23 06:10:16 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
added sympy to bib and making small grammar, spelling and style changes.
Revision
4879 -
Directory Listing
Modified
Wed Apr 23 00:50:36 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
symbolic part of user guide nearly complete
Revision
4878 -
Directory Listing
Modified
Wed Apr 23 00:49:10 2014 UTC
(8 years ago)
by
jduplessis
Original Path:
trunk
adding figures for symbolic part of user guide.
Revision
4877 -
Directory Listing
Modified
Tue Apr 22 07:24:32 2014 UTC
(8 years ago)
by
caltinay
Original Path:
trunk
new intel cc,mkl & mpi on savanna.
Revision
4876 -
Directory Listing
Modified
Tue Apr 22 05:43:36 2014 UTC
(8 years ago)
by
sshaw
Original Path:
trunk
fixing package requirements for ubuntu trusty packages
Revision
4875 -
Directory Listing
Modified
Thu Apr 17 06:14:54 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Updated changelog
Revision
4874 -
Directory Listing
Modified
Thu Apr 17 01:13:10 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
fixed ripley dirac test for multiple ranks and added protections against MPI causing problems due to premature exits by some ranks
Revision
4873 -
Directory Listing
Modified
Wed Apr 16 06:38:51 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
whitespace only changes.
Revision
4872 -
Directory Listing
Modified
Wed Apr 16 06:08:06 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
adding dirac point interpolation tests for ripley, all ranks will be used in subdividing each axis in turn
Revision
4871 -
Directory Listing
Modified
Wed Apr 16 05:28:27 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
changed symconsts to symconsts to fit the rest of escript
Revision
4870 -
Directory Listing
Modified
Mon Apr 14 10:50:41 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Q: ...so what does this papi flag do?
A: darn, you got me.
[now it prints errors with the papi version shipped with debian, hooray]
Revision
4869 -
Directory Listing
Modified
Mon Apr 14 10:39:22 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
all of paso now lives in its own namespace.
Revision
4868 -
Directory Listing
Modified
Sat Apr 12 01:50:15 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
don't report an error when there isn't one.....
Revision
4867 -
Directory Listing
Modified
Fri Apr 11 12:29:49 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso: starting to polish
Revision
4866 -
Directory Listing
Modified
Fri Apr 11 03:28:35 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Remove reference to epydoc documentation from doxygen (since our debian doc package uses sphinx).
Revision
4865 -
Directory Listing
Modified
Fri Apr 11 02:38:11 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
bringing doxygen reported version number up to date
Revision
4864 -
Directory Listing
Modified
Fri Apr 11 02:04:18 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
fixing mkl build.
Revision
4863 -
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Modified
Thu Apr 10 06:24:55 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
cleansing
Revision
4862 -
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Modified
Thu Apr 10 05:35:56 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
removing leftover debug prints
Revision
4861 -
Directory Listing
Modified
Thu Apr 10 05:17:47 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
added exception for domain sizes that cause integer overflows
Revision
4860 -
Directory Listing
Modified
Thu Apr 10 04:08:42 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
wrapping resize exceptions for overly large domains (previous message to user was: 'RuntimeError: vector::_M_fill_insert')
Revision
4859 -
Directory Listing
Modified
Thu Apr 10 00:23:29 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Avoid division by zero
Revision
4858 -
Directory Listing
Modified
Wed Apr 9 23:34:17 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
skipping multirank segywriter tests now that multirank writes throw exceptions
Revision
4857 -
Directory Listing
Modified
Wed Apr 9 06:54:59 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
modified atoms code that when type is set to escript.Symbol, sympy.symbol get added to the type list. This is because escript.symbols are represented by sympy symbols in the _arr list
Revision
4856 -
Directory Listing
Modified
Wed Apr 9 06:46:55 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
some mopping in paso
Revision
4855 -
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Modified
Wed Apr 9 06:19:59 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
removing leftover python solveroptions
Revision
4854 -
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Modified
Wed Apr 9 06:17:09 2014 UTC
(8 years, 1 month ago)
by
gross
Original Path:
trunk
FWI is running
Revision
4853 -
Directory Listing
Modified
Wed Apr 9 05:41:57 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Added import division and changed a few / to //
Revision
4852 -
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Modified
Wed Apr 9 03:58:08 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso util sweep
Revision
4851 -
Directory Listing
Modified
Wed Apr 9 03:30:36 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
added exceptions to ripley for more informative deaths to negative element counts
Revision
4850 -
Directory Listing
Modified
Wed Apr 9 02:26:22 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
adding exception for multi-rank segy write instead of failing to write correctly and reporting success
Revision
4849 -
Directory Listing
Modified
Wed Apr 9 02:14:58 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
More vacuuming.
Revision
4848 -
Directory Listing
Modified
Wed Apr 9 00:26:32 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
lots of future print_function
Revision
4847 -
Directory Listing
Modified
Wed Apr 9 00:11:55 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
fixed awkard integer division in LinearMapping (py3 unaffected)
Revision
4846 -
Directory Listing
Modified
Tue Apr 8 23:55:38 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso::Options.
Revision
4845 -
Directory Listing
Modified
Tue Apr 8 11:35:27 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
I fink I broke it - now I thixed it.
Revision
4844 -
Directory Listing
Modified
Tue Apr 8 07:56:52 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Removing MPIInfo from pythonMPI
Revision
4843 -
Directory Listing
Modified
Tue Apr 8 05:32:07 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
checkpointing paso::Preconditioner.
Revision
4842 -
Directory Listing
Modified
Tue Apr 8 04:50:05 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
Removing variational problem as it will not be part of the release
Revision
4841 -
Directory Listing
Modified
Tue Apr 8 03:49:18 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
keeping older compilers happy
Revision
4840 -
Directory Listing
Modified
Tue Apr 8 03:24:47 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
scons options for trusty
Revision
4839 -
Directory Listing
Modified
Tue Apr 8 03:14:23 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Adding initial support for ubuntu trusty
Revision
4838 -
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Modified
Mon Apr 7 10:16:21 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Fixing non-mpi build.
Revision
4837 -
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Modified
Mon Apr 7 05:59:24 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
added test for evalf
Revision
4836 -
Directory Listing
Modified
Mon Apr 7 05:51:55 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
"Some" SystemMatrix clean up.....
Revision
4835 -
Directory Listing
Modified
Mon Apr 7 04:29:20 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
removing unused MIS
Revision
4834 -
Directory Listing
Modified
Mon Apr 7 00:32:14 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Added Jaco
Revision
4833 -
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Modified
Sun Apr 6 23:30:34 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Adding missing names.
Revision
4832 -
Directory Listing
Modified
Fri Apr 4 05:03:45 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
some incredibly long lines are now much, much nicer to read/wrap
Revision
4831 -
Directory Listing
Modified
Fri Apr 4 02:42:52 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
fixing MKL compile.
Revision
4830 -
Directory Listing
Modified
Thu Apr 3 04:45:06 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Removed obsolete file, reverted verbosity of test and a bit more cleanup.
Revision
4829 -
Directory Listing
Modified
Thu Apr 3 04:02:53 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
checkpointing some SparseMatrix cleanup.
Revision
4828 -
Directory Listing
Modified
Wed Apr 2 07:01:38 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
more tightly constrained checks on types and lengths of dirac points and tags in ripley python constructors
Revision
4827 -
Directory Listing
Modified
Wed Apr 2 07:00:15 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
dropping out of domain dirac points for ripley Brick as well
Revision
4826 -
Directory Listing
Modified
Wed Apr 2 03:54:18 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
changing ripley to drop dirac points outside domain rather than try to map them, matches finley behaviour
Revision
4825 -
Directory Listing
Modified
Wed Apr 2 03:53:23 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Addresses issue 241
Revision
4824 -
Directory Listing
Modified
Tue Apr 1 06:40:19 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
fixed sillyness with serial builds reporting as MPI
Revision
4823 -
Directory Listing
Modified
Tue Apr 1 05:46:07 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
SolverBuddy documentation changes from old python docstrings to doxygen format
Revision
4822 -
Directory Listing
Modified
Tue Apr 1 05:05:45 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
now with all required files at no extra cost
Revision
4821 -
Directory Listing
Modified
Tue Apr 1 04:58:33 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
moved SolverOptions to c++, split into SolverOptions for the options and SolverBuddy as the state as a precursor to per-pde solving... does break some use cases (e.g. pde.getSolverOptions().DIRECT will now fail, new value access is with SolverOptions.DIRECT), examples and documentation updated to match
Revision
4820 -
Directory Listing
Modified
Tue Apr 1 04:55:49 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
allowing for larger amounts of variable tracking with debug=true (mostly for escriptcpp.cpp)
Revision
4819 -
Directory Listing
Modified
Tue Apr 1 03:50:23 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Pattern shared ptrs
Revision
4818 -
Directory Listing
Modified
Mon Mar 31 00:16:20 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
SystemMatrixPattern shptr
Revision
4817 -
Directory Listing
Modified
Fri Mar 28 08:04:09 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Coupler/Connector shared ptrs.
Revision
4816 -
Directory Listing
Modified
Fri Mar 28 06:16:02 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso::SharedComponents now header-only and shared ptr managed.
Revision
4815 -
Directory Listing
Modified
Fri Mar 28 05:25:56 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
replacing awful config file debugthing
Revision
4814 -
Directory Listing
Modified
Fri Mar 28 04:31:02 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso::Distribution instances are now managed by a boost::shared_ptr, methods
are all inline.
Revision
4811 -
Directory Listing
Modified
Thu Mar 27 07:00:46 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
moving away from shared pointers in domain components
Revision
4810 -
Directory Listing
Modified
Thu Mar 27 07:00:30 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Removed some obsolete checkPtr's. More to come...
Revision
4809 -
Directory Listing
Modified
Thu Mar 27 05:52:41 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Removed code duplication and moved IndexList to esysUtils header only.
Renamed AML.cpp which is old,unused code.
Revision
4807 -
Directory Listing
Modified
Thu Mar 27 04:49:38 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
2 fixes to dirac points which fixes #240.
Revision
4806 -
Directory Listing
Modified
Thu Mar 27 03:03:13 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
fixed fetch error in type collation for lame assembler
Revision
4805 -
Directory Listing
Modified
Thu Mar 27 01:31:59 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
changing 2D wave assembler to use shared domain pointer
Revision
4803 -
Directory Listing
Modified
Wed Mar 26 06:52:28 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
Removed obsolete wrappers for malloc and friends.
Paso_Pattern -> paso::Pattern
Revision
4801 -
Directory Listing
Modified
Wed Mar 26 03:26:58 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso::Coupler and paso::Connector.
Revision
4800 -
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Modified
Wed Mar 26 01:50:04 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
paso::SystemMatrixPattern
Revision
4799 -
Directory Listing
Modified
Wed Mar 26 00:37:59 2014 UTC
(8 years, 1 month ago)
by
sshaw
Original Path:
trunk
storing the code generators for the relevant chunks of the lame assembler
Revision
4798 -
Directory Listing
Modified
Tue Mar 25 22:08:30 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
added missing const.
Revision
4797 -
Directory Listing
Modified
Mon Mar 24 05:42:42 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
put SparseMatrix into paso namespace, accompanied by minor code cleanup.
Revision
4795 -
Directory Listing
Modified
Mon Mar 24 01:50:32 2014 UTC
(8 years, 1 month ago)
by
caltinay
Original Path:
trunk
code cleanup of paso::SparseMatrix_MatrixVector and variants.
Mostly a no-op.
Revision
4794 -
Directory Listing
Modified
Mon Mar 24 01:01:30 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
adding symbolic to user guide, work in progress
Revision
4793 -
Directory Listing
Modified
Fri Mar 21 06:44:26 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
changed 'dict_keys' object to list so that it can be indexed
Revision
4792 -
Directory Listing
Modified
Fri Mar 21 05:06:11 2014 UTC
(8 years, 1 month ago)
by
jfenwick
Original Path:
trunk
make escriptcore/ visible
Revision
4791 -
Directory Listing
Modified
Fri Mar 21 03:32:56 2014 UTC
(8 years, 1 month ago)
by
jduplessis
Original Path:
trunk
changed has_key to in for python 3
Revision
4789 -
Directory Listing
Modified
Fri Mar 21 00:30:32 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
changing more awkward logic into more obvious (and correct, though i doubt a negative length ever happens) logic
Revision
4788 -
Directory Listing
Modified
Fri Mar 21 00:11:09 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed a broken numerical comparison
Revision
4787 -
Directory Listing
Modified
Fri Mar 21 00:08:15 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
changed header guard definition to match header guard check
Revision
4786 -
Directory Listing
Modified
Thu Mar 20 23:53:44 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed silly naming issue
Revision
4783 -
Directory Listing
Modified
Thu Mar 20 06:23:23 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
refactored linearPDE tests (removing repetition)
Revision
4782 -
Directory Listing
Modified
Thu Mar 20 05:16:16 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
cleaned up and simplified run_seismic tests, including specific checking for obspy not being installed
Revision
4781 -
Directory Listing
Modified
Thu Mar 20 04:57:07 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
added test for preservation of data substitutions
Revision
4780 -
Directory Listing
Modified
Thu Mar 20 03:19:54 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixing a race condition in file tests
Revision
4779 -
Directory Listing
Modified
Thu Mar 20 01:52:49 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Temporarily adjusting magic numbers
Revision
4778 -
Directory Listing
Modified
Thu Mar 20 00:41:58 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
python3ified tests using deprecated test methods ( #89 and #106 ), added run_seismic into downunder tests (with skips if obspy/segywriters fail to write)
Revision
4777 -
Directory Listing
Modified
Wed Mar 19 23:52:36 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
replacing xrange with range for python3 compatibility, refs #106
Revision
4776 -
Directory Listing
Modified
Wed Mar 19 23:31:00 2014 UTC
(8 years, 2 months ago)
by
caltinay
Original Path:
trunk
Removed some superfluous checks and typos.
Revision
4775 -
Directory Listing
Modified
Wed Mar 19 23:12:53 2014 UTC
(8 years, 2 months ago)
by
caltinay
Original Path:
trunk
Moved matrix format exception further up the stack which fixes #109.
Also, removed default defines CORE_ID1 and BLOCKTIMER, added the former to
savanna's options.
Revision
4772 -
Directory Listing
Modified
Wed Mar 19 04:28:53 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
removing ridiculous remaining return
Revision
4771 -
Directory Listing
Modified
Wed Mar 19 04:22:37 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed multiple ranks trying to unlink tempfiles
Revision
4770 -
Directory Listing
Modified
Wed Mar 19 03:48:43 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
relevant tests skipped if not built with USE_BOOSTIO
Revision
4769 -
Directory Listing
Modified
Wed Mar 19 03:43:52 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added missing ifdefs for library presence
Revision
4768 -
Directory Listing
Modified
Wed Mar 19 02:51:33 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Removed commented for loops
Revision
4767 -
Directory Listing
Modified
Wed Mar 19 02:48:33 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Major issues with subs and data objects have been rectified. subs was also not working properly for symbol to symbol substitutions this has been rectified.
Revision
4766 -
Directory Listing
Modified
Wed Mar 19 00:57:21 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
allowed custom assemblers a value tolerance in tests (for case of 0 to 1 in objects, tolerance of 1e-8)
Revision
4765 -
Directory Listing
Modified
Wed Mar 19 00:17:16 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added ripley rectangle reading from compressed files, added unit tests for binaryGrid reads and writes (only single ranks for compressed thus far) (#104)
Revision
4764 -
Directory Listing
Modified
Tue Mar 18 15:58:21 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
mapping test fixed
Revision
4761 -
Directory Listing
Modified
Tue Mar 18 00:25:55 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed partially overridden class warnings with intel compiler
Revision
4760 -
Directory Listing
Modified
Mon Mar 17 23:48:37 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
moved functionspace type collation from RipleyDomain into custom assemblers, refs #102
Revision
4759 -
Directory Listing
Modified
Mon Mar 17 07:52:26 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Throw TypeError on any attempt to use relational ops on Data, FunctionSpace and Domain. Also fixes a type error in run_mappings.py but the test still fails.
Revision
4758 -
Directory Listing
Modified
Mon Mar 17 05:00:27 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed classname typo for AcousticVelocityMapping, added exceptions for ordered comparisons with Data objects from python (#107)
Revision
4755 -
Directory Listing
Modified
Mon Mar 17 02:58:52 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added conflict test for ripley Brick
Revision
4754 -
Directory Listing
Modified
Mon Mar 17 02:51:12 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
now with 0% missing files!
Revision
4753 -
Directory Listing
Modified
Mon Mar 17 02:39:44 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added exceptions for conflicting assembler types, added tests for lame assemblers
Revision
4751 -
Directory Listing
Modified
Fri Mar 14 06:49:06 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
completed LameAssemblers
Revision
4749 -
Directory Listing
Modified
Fri Mar 14 03:05:07 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
making inversioncostfunctions python3 compatible
Revision
4748 -
Directory Listing
Modified
Fri Mar 14 00:30:51 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
adjusted InversionCostFunction tests to run on arbitrary numbers of ranks
Revision
4744 -
Directory Listing
Modified
Wed Mar 12 21:30:10 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
first version of a FWI
Revision
4743 -
Directory Listing
Modified
Wed Mar 12 21:09:20 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
mapping for FWI added
Revision
4742 -
Directory Listing
Modified
Wed Mar 12 07:21:24 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
updated setitem and getitem to preserve data substitutions
Revision
4741 -
Directory Listing
Modified
Wed Mar 12 03:31:10 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix scoping because my compiler complained. g++4.8 thing?
Revision
4740 -
Directory Listing
Modified
Wed Mar 12 03:26:13 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
exporting compression support to buildvars
Revision
4739 -
Directory Listing
Modified
Wed Mar 12 03:25:32 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixing test file filename mismatch
Revision
4738 -
Directory Listing
Modified
Wed Mar 12 01:32:36 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
adding support for reading binary grids from gzip compressed binary files, ripley brick only so far
Revision
4737 -
Directory Listing
Modified
Tue Mar 11 13:23:21 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
missing file
Revision
4735 -
Directory Listing
Modified
Mon Mar 10 07:44:58 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixing/completing 2D lame assembler
Revision
4733 -
Directory Listing
Modified
Mon Mar 10 05:57:11 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
added a check to only get data substitutions on symbols
Revision
4729 -
Directory Listing
Modified
Sat Mar 8 00:56:37 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
a more general for of the inversioncostfunction has required for waveform inversin
Revision
4728 -
Directory Listing
Modified
Fri Mar 7 05:29:06 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
renamed
Revision
4727 -
Directory Listing
Modified
Fri Mar 7 05:28:12 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
added an optional evalf input to the evaluator, without this constants such as pi etc wont get evaluated. and renamed constants symconstants
Revision
4726 -
Directory Listing
Modified
Fri Mar 7 00:23:44 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
Added a success/fail line below config in build process ( redmine #26 )
Revision
4723 -
Directory Listing
Modified
Wed Mar 5 05:40:25 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
fixed presenservation of data objects(data substitutions) when subs is called on a symbol
Revision
4722 -
Directory Listing
Modified
Wed Mar 5 05:29:25 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
vastly decreased ripley domain setup time under MPI (approximately from O(n*m) to O(n+m), n being shared nodes, m being the rank DOF)
Revision
4721 -
Directory Listing
Modified
Fri Feb 28 03:51:07 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixing strange casts.
Removed old methods.
Revision
4720 -
Directory Listing
Modified
Fri Feb 28 01:38:09 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
ripley now tested with lame, helmholtz and nolumping linear PDEs
Revision
4719 -
Directory Listing
Modified
Fri Feb 28 00:27:29 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Modify run_forward test to account for small negative results.
Revision
4718 -
Directory Listing
Modified
Thu Feb 27 23:43:12 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
Added a missed include guard
Revision
4717 -
Directory Listing
Modified
Thu Feb 27 12:30:04 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix copy error from 3d down to 2d.
Revision
4716 -
Directory Listing
Modified
Thu Feb 27 11:02:55 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixed some bad indenting.
Skip non-linear tests if sympy is not available.
Revision
4715 -
Directory Listing
Modified
Thu Feb 27 07:57:45 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixing print statement
Revision
4714 -
Directory Listing
Modified
Thu Feb 27 05:04:15 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
made non-linearPDE tests on ripley work with any number of ranks
Revision
4713 -
Directory Listing
Modified
Thu Feb 27 02:00:15 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Added a temporay fix to get some of the unit tests passing again.
This mechanism will be removed before the release so don't get used to it.
Revision
4712 -
Directory Listing
Modified
Wed Feb 26 04:08:41 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
adding skeleton of fast Lame assemblers
adjusted automatic ripley domain subdivision ( should solve issue #94 )
more tab->space conversions
Revision
4711 -
Directory Listing
Modified
Tue Feb 25 00:04:04 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Another try at this test.
Revision
4710 -
Directory Listing
Modified
Mon Feb 24 03:41:06 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixing not enough elements for small numbers of ranks in test
Revision
4709 -
Directory Listing
Modified
Mon Feb 24 01:31:00 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Failed to take ripley padding into account when constructing tests.
Revision
4708 -
Directory Listing
Modified
Fri Feb 21 03:08:05 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Removed rotation from ydirection test
Revision
4707 -
Directory Listing
Modified
Fri Feb 21 03:07:09 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Modified domain in tests
Revision
4706 -
Directory Listing
Modified
Fri Feb 21 02:39:58 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Some additional cleanup I missed
Revision
4705 -
Directory Listing
Modified
Fri Feb 21 02:36:15 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Set the randomfill back to generating randoms and updated doco to tell people how to use it.
Revision
4704 -
Directory Listing
Modified
Fri Feb 21 01:11:30 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
added modification
double *F_p=NULL;
if(!p.F.isEmpty()) {
p.F.requireWrite();
F_p=p.F.getSampleDataRW(0);
}
to all files such they will not operate on an empty F.
Revision
4703 -
Directory Listing
Modified
Fri Feb 21 00:55:31 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
This version has been tested in some detail. It does not actually do randoms though (since that wrecks the testing). In will do a commit soon which puts the randomness back
Revision
4702 -
Directory Listing
Modified
Thu Feb 20 06:36:00 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
updated test_yDirection fixed a couple of small bugs
Revision
4701 -
Directory Listing
Modified
Thu Feb 20 06:32:12 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Put in a check to make sure F is not used when empty. This prevents an exception.
Revision
4700 -
Directory Listing
Modified
Thu Feb 20 03:57:17 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
some more work toward seismic data
Revision
4699 -
Directory Listing
Modified
Wed Feb 19 09:31:45 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
Added test when adding incorrect Dim And Shape, for tryin to set Unknown Perameter and a test to make sure the definition of y is correct
Revision
4698 -
Directory Listing
Modified
Wed Feb 19 08:10:12 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
data sources support tags now
Revision
4697 -
Directory Listing
Modified
Wed Feb 19 08:03:56 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
data sources support tags now
Revision
4696 -
Directory Listing
Modified
Wed Feb 19 07:29:50 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Correcting python libname for sage.
Fixing bug where the number of values in the shape was not considered for buffer and message size.
Revision
4695 -
Directory Listing
Modified
Wed Feb 19 06:58:41 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added warning output when saving as silo but not built with silo support (redmine #87 )
Revision
4694 -
Directory Listing
Modified
Wed Feb 19 06:25:55 2014 UTC
(8 years, 2 months ago)
by
jduplessis
Original Path:
trunk
fixed __getitem__ such that the symbol it return will have the same dimentionality as its parent symbol
Revision
4693 -
Directory Listing
Modified
Wed Feb 19 06:04:28 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
adding HTI support to 3D wave assembler
Revision
4692 -
Directory Listing
Modified
Wed Feb 19 05:26:55 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
fixed duplication for 2D constant data in wave assembler
Revision
4691 -
Directory Listing
Modified
Wed Feb 19 05:23:17 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
added support for HTI waves to the fast wave assembler
Revision
4690 -
Directory Listing
Modified
Wed Feb 19 05:22:16 2014 UTC
(8 years, 2 months ago)
by
sshaw
Original Path:
trunk
adjusting porcupine config to use MPI by default
Revision
4689 -
Directory Listing
Modified
Wed Feb 19 05:13:17 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Give the unit test enough room
Revision
4688 -
Directory Listing
Modified
Wed Feb 19 03:18:58 2014 UTC
(8 years, 2 months ago)
by
gross
Original Path:
trunk
acoustic forward problem + testing add
Revision
4687 -
Directory Listing
Modified
Wed Feb 19 00:03:29 2014 UTC
(8 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Remove randomFill python method from ripley domains.
All random data objects (for all domain types) should be generated
using esys.escript.RandomData()
The only filtered random we have is gaussian on ripley but
it is triggered by passing the tuple as the last arg of RandomData().
While the interface is a bit more complicated (in that you always need
to pass in shape and functionspace) it does mean we have a
common interface for all domains.
Removed randomFill from DataExpanded.
The reasoning behind this is to force domains to call the util function
themselves and enforce whatever consistancy requirements they have.
Added version of blocktools to deal with 2D case in Ripley.
Use blocktools for the 2D transfers [This was cleaner than modifying the
previous implementation to deal with variable shaped points].
Note that under MPI, ripley can not generate random data (even unfiltered)
if any of its per rank dimensions is <4 elements on any side.
Unit tests for these calls are in but some extra checks still needed.
Revision
4686 -
Directory Listing
Modified
Tue Feb 18 06:04:13 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
modified nonlinearPDE to be compatible with python 3.
Revision
4685 -
Directory Listing
Modified
Tue Feb 18 04:19:27 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Replaced python dictionary iteritems with item for python 3.0 compatibility
Revision
4684 -
Directory Listing
Modified
Tue Feb 18 01:17:02 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Removing Finley mesh import which was copied from run_linearPdeOnFinley... as it is not used.
Revision
4683 -
Directory Listing
Modified
Mon Feb 17 07:03:40 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
adding nonlinearpde test for ripley.
Revision
4682 -
Directory Listing
Modified
Mon Feb 17 05:24:14 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Revision
4681 -
Directory Listing
Modified
Mon Feb 17 04:05:11 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Revision
4680 -
Directory Listing
Modified
Mon Feb 17 04:04:40 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
changed name
Revision
4679 -
Directory Listing
Modified
Mon Feb 17 04:02:56 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Changed name
Revision
4678 -
Directory Listing
Modified
Mon Feb 17 03:35:08 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
adding ripley test for nlpde
Revision
4677 -
Directory Listing
Modified
Mon Feb 17 02:49:59 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
adding nlpde tests
Revision
4676 -
Directory Listing
Modified
Mon Feb 17 02:41:15 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Unit test for nonlinear pde.
test that it can generate a solution without error and that the appropriate coefficients are generated when setValue is called.
Revision
4675 -
Directory Listing
Modified
Mon Feb 17 01:07:12 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
expanded tab chars for consistentcy and removed trailing whitespace
Revision
4674 -
Directory Listing
Modified
Thu Feb 13 23:47:04 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Not using GNU only getopt arguments
Revision
4673 -
Directory Listing
Modified
Thu Feb 13 08:14:11 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Ammended install doco for OSX
Revision
4672 -
Directory Listing
Modified
Thu Feb 13 01:10:29 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
compacted older style C comparison structure
Revision
4671 -
Directory Listing
Modified
Thu Feb 13 00:18:10 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixed another comparator which wasn't strict
Revision
4670 -
Directory Listing
Modified
Wed Feb 12 08:24:31 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Correcting comparator function so it acts as < rather than <=
Revision
4669 -
Directory Listing
Modified
Tue Feb 11 06:10:27 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Replacing .eps figures in user guide with their pdf versions.
If you are creating new figures, then please don't use .eps
Revision
4668 -
Directory Listing
Modified
Tue Feb 11 03:44:10 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Improvements but still needs more validation
Revision
4667 -
Directory Listing
Modified
Tue Feb 11 00:47:26 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
adjusted launcher to run efficiently/properly on raijin
Revision
4666 -
Directory Listing
Modified
Mon Feb 10 03:33:51 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
check in util no longer necassary due to wrappings in contants.py
Revision
4665 -
Directory Listing
Modified
Mon Feb 10 03:29:02 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
This should help running on raijin without damaging anything.
Revision
4664 -
Directory Listing
Modified
Mon Feb 10 01:57:11 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Trying to make the shell on osx happy.
Revision
4663 -
Directory Listing
Modified
Mon Feb 10 00:48:49 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Adding wrapper for Symbolic constants such as pi
usage:
symconsts.pi ---> gives escript Symbol(sympy.pi)
Revision
4662 -
Directory Listing
Modified
Sun Feb 9 23:03:45 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Cater for changed interface in sympy 0.7.2.
Also silenced a harmless warning.
Revision
4661 -
Directory Listing
Modified
Fri Feb 7 03:10:15 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
more informative exception for unsupported error message
Revision
4660 -
Directory Listing
Modified
Fri Feb 7 03:08:49 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed dirac point->node mapping issues in ripley when using mpi
Revision
4659 -
Directory Listing
Modified
Fri Feb 7 00:13:47 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
New solution to cos(sympy.pi). This solution help to keep sympy optional in escript and provides the desired functionality.
Revision
4658 -
Directory Listing
Modified
Thu Feb 6 13:28:56 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
This seems to fix #65 but is a bit scary.
netcdf and gdal (and others?) seem to return bytearrays instead of strings in
py3, which when fed back into a library function caused a segfault.
Not sure if I caught every case and whether this is actually a bug in the lib...
Revision
4657 -
Directory Listing
Modified
Thu Feb 6 06:12:20 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
I changed some files.
Updated copyright notices, added GeoComp.
Revision
4656 -
Directory Listing
Modified
Thu Feb 6 05:12:01 2014 UTC
(8 years, 3 months ago)
by
gross
Original Path:
trunk
removed unwanted table
Revision
4654 -
Directory Listing
Modified
Wed Feb 5 06:55:35 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Modified some of the util function so that they will operate with general sympy objects such as pi.
This is usefull when you want to do
sin(pi) or cos(pi) for example
where pi is a sympy object.
Revision
4653 -
Directory Listing
Modified
Wed Feb 5 05:20:41 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Made index chars unsigned to prevent warnings
Revision
4652 -
Directory Listing
Modified
Wed Feb 5 05:15:07 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Made index chars unsigned to prevent warnings
Revision
4651 -
Directory Listing
Modified
Wed Feb 5 05:00:34 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixed missing include
Revision
4650 -
Directory Listing
Modified
Wed Feb 5 04:16:01 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixed a spelling error and missing virtual (not sure that one matters).
Added _untested_ 3D gaussian smoothed random data
Revision
4649 -
Directory Listing
Modified
Wed Feb 5 02:09:21 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Forgot something...
Revision
4648 -
Directory Listing
Modified
Wed Feb 5 02:03:08 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fix segfault reported in #57.
Revision
4647 -
Directory Listing
Modified
Mon Feb 3 03:29:43 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Commiting to make sure line 309 doesn't contain print len(u_syms)\n
Revision
4646 -
Directory Listing
Modified
Mon Feb 3 00:25:58 2014 UTC
(8 years, 3 months ago)
by
gross
Original Path:
trunk
some extensions to synthetic_sonicHTI.py
Revision
4645 -
Directory Listing
Modified
Mon Feb 3 00:06:24 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
further optimisation of wave assemblers, added support for constant data
Revision
4644 -
Directory Listing
Modified
Mon Feb 3 00:03:52 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed indent errors in coalgas, added future print import to seismic_wave, since it was using py3 style prints
Revision
4643 -
Directory Listing
Modified
Sun Feb 2 23:52:38 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed some error message formatting interpreting tuples badly
Revision
4642 -
Directory Listing
Modified
Fri Jan 31 02:16:45 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Renamed the default options file to make it clear that it was used for g++.
There is now no default mole options file.
This is deliberate. You need to configure your environment based on the compiler you wish to use. (See scripts in /usr/local/env).
If you are doing a lot of building, symlink your chosen file to scons/mole_options.py. DO NOT COMMIT it though.
Revision
4641 -
Directory Listing
Modified
Fri Jan 31 02:13:47 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
line 966
"if not args.has_key(n): args[n]=Data()" was changed to "if not args.has_key(n) and not constants.has_key(n): args[n]=Data()".
also added:
args=dict(args.items()+constants.items())
to merge the two dictionaries.
Revision
4640 -
Directory Listing
Modified
Fri Jan 31 00:56:51 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Ensure that DYLD_LIBRARY_PATH is passed into scons.
Update mole_options to work with g++
(To get this to work, you will need to set up your env vars).
Revision
4639 -
Directory Listing
Modified
Thu Jan 30 06:43:03 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
They should be equivalent but just in case ! == is treated differently to !=
Revision
4638 -
Directory Listing
Modified
Thu Jan 30 06:25:10 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixes necessary to get a clang/macports build working on 10.9
Revision
4637 -
Directory Listing
Modified
Thu Jan 30 00:01:47 2014 UTC
(8 years, 3 months ago)
by
gross
Original Path:
trunk
TTI fixes
Revision
4636 -
Directory Listing
Modified
Tue Jan 28 04:24:30 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed more whitespace issues
Revision
4635 -
Directory Listing
Modified
Tue Jan 28 03:34:04 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed mixed tabs/spaces for python 3 compatibility
Revision
4634 -
Directory Listing
Modified
Tue Jan 28 03:33:03 2014 UTC
(8 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixes to keep clang happy
Revision
4633 -
Directory Listing
Modified
Tue Jan 28 01:04:17 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed failure for lazy data when interpolating.
Revision
4632 -
Directory Listing
Modified
Tue Jan 28 00:22:53 2014 UTC
(8 years, 3 months ago)
by
gross
Original Path:
trunk
missing file
Revision
4631 -
Directory Listing
Modified
Fri Jan 24 04:13:56 2014 UTC
(8 years, 3 months ago)
by
gross
Original Path:
trunk
2d TTI added
Revision
4630 -
Directory Listing
Modified
Fri Jan 24 03:32:11 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
fixed a leftover from testin gin seismic, changed synthetic_VTI example back to original large 2D problem
Revision
4629 -
Directory Listing
Modified
Fri Jan 24 03:29:25 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
added dirac point interpolation to ripley (and fixed dirac points in Brick)
added fast wave assembler for Brick and minor correction to fast wave assembler for Rectangle
Revision
4628 -
Directory Listing
Modified
Fri Jan 24 02:09:19 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
Modifying nonlinearPDE.py comments to make the meaning clearer
Revision
4627 -
Directory Listing
Modified
Fri Jan 24 01:53:33 2014 UTC
(8 years, 3 months ago)
by
jduplessis
Original Path:
trunk
fixing error in comment
Revision
4626 -
Directory Listing
Modified
Wed Jan 22 06:07:34 2014 UTC
(8 years, 3 months ago)
by
caltinay
Original Path:
trunk
Eliminated all const_cast<Data*> hacks in ripley and finley now that
Data.getSampleDataRO returns a const pointer.
Revision
4625 -
Directory Listing
Modified
Mon Jan 20 03:42:55 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
amalgamated waveassembler constant construction into the one place
Revision
4624 -
Directory Listing
Modified
Sun Jan 19 23:03:59 2014 UTC
(8 years, 3 months ago)
by
sshaw
Original Path:
trunk
removed some leftover debug prints
Revision
4623 -
Directory Listing
Modified
Fri Jan 17 05:53:17 2014 UTC
(8 years, 4 months ago)
by
sshaw
Original Path:
trunk
added missing files and a spare missing comma, also the ability for finley VTIWaves to not crash
Revision
4622 -
Directory Listing
Modified
Fri Jan 17 04:55:41 2014 UTC
(8 years, 4 months ago)
by
sshaw
Original Path:
trunk
Added dirac support to ripley, added interface for custom assemblers for ripleydomains (also added the custom assembler for 2D VTI waves), changed synthetic_VTI example to use the new, faster custom assembler
Revision
4621 -
Directory Listing
Modified
Thu Jan 16 10:07:44 2014 UTC
(8 years, 4 months ago)
by
jfenwick
Original Path:
trunk
getSampleDataRO is now const
Revision
4620 -
Directory Listing
Modified
Thu Jan 16 03:17:20 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
py3 RuntimeError does not have 'message' member.
Revision
4619 -
Directory Listing
Modified
Thu Jan 16 02:10:26 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
updated gp py3 options.
Revision
4618 -
Directory Listing
Modified
Wed Jan 15 04:35:19 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
Implemented reverse reading of grid data from netcdf files.
Fixes #44.
Revision
4617 -
Directory Listing
Modified
Wed Jan 15 03:49:19 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
new name for boost library on guineapig
Revision
4616 -
Directory Listing
Modified
Tue Jan 14 22:57:47 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
- Fixed unit test failure by populating missing parts of the struct
- prepared for reversing read order from grids
- worked around a segfault caused by python version in jessie (2.7.6) in
combination with gdal,pyproj and RTLD_GLOBAL in dlopen flags.
Revision
4615 -
Directory Listing
Modified
Mon Jan 13 05:05:33 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
Step 1 for #31: wrap parameters in an object.
Revision
4614 -
Directory Listing
Modified
Mon Jan 13 02:44:07 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
Corrected a faulty test.
Revision
4613 -
Directory Listing
Modified
Mon Jan 13 01:09:01 2014 UTC
(8 years, 4 months ago)
by
caltinay
Original Path:
trunk
Addresses #43 - altitude is now scaled according to reference system height
unit.
Also separated out UTM zone determination from the actual projection code
to silence bogus output.
Revision
4612 -
Directory Listing
Modified
Thu Jan 9 05:30:27 2014 UTC
(8 years, 4 months ago)
by
gross
Original Path:
trunk
modifications to sonic seismic
Revision
4611 -
Directory Listing
Modified
Mon Dec 23 04:03:00 2013 UTC
(8 years, 4 months ago)
by
gross
Original Path:
trunk
scaling corrected
Revision
4610 -
Directory Listing
Modified
Mon Dec 23 00:01:23 2013 UTC
(8 years, 4 months ago)
by
gross
Original Path:
trunk
exposed createAbsorbtionLayerFunction
Revision
4609 -
Directory Listing
Modified
Fri Dec 20 07:56:56 2013 UTC
(8 years, 4 months ago)
by
gross
Original Path:
trunk
fix to deal with empty right hand side vector F.
Revision
4608 -
Directory Listing
Modified
Fri Dec 20 01:53:04 2013 UTC
(8 years, 4 months ago)
by
sshaw
Original Path:
trunk
tiny grammar fix in user guide
Revision
4607 -
Directory Listing
Modified
Wed Dec 18 09:46:16 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
include cmath in all cases rather than math.h - the mathinf for intel on windows is still there (in part because we have no way to test if it is still relevant)
Revision
4606 -
Directory Listing
Modified
Wed Dec 18 08:21:25 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Updating run_models to not call the old DarcyFlow methods
Revision
4605 -
Directory Listing
Modified
Wed Dec 18 06:05:43 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Mantis issue #675 said
Cihan:
while merging symbolic into trunk I noticed that most dudley tests are
disabled. This happened in revision 3261 where you wrote:
"Disable some unit tests for dudley until I can fix MPI failures"
Is that fixed?
=== I'm renabling most of the test (which pass without difficulty).
But one of them appears to be out of date or something.
More investigation required.
Revision
4604 -
Directory Listing
Modified
Wed Dec 18 03:29:26 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
fixed tabs/space mix for python3
Revision
4603 -
Directory Listing
Modified
Wed Dec 18 02:24:32 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Added boost::noncopyable to remaining abstract base classes in the module file.
ie escriptcpp.cpp
Note I have not altered the c++ inheritance (this just just for the boost::python import)
Revision
4602 -
Directory Listing
Modified
Wed Dec 18 01:15:22 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixed missing \
Revision
4601 -
Directory Listing
Modified
Tue Dec 17 23:37:08 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
downunder: self-demagnetization added as forward model.
Revision
4600 -
Directory Listing
Modified
Tue Dec 17 04:28:40 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Using section: science in debian/control instead of main.
This new value for section has the virtue of actually existing
Revision
4599 -
Directory Listing
Modified
Sun Dec 15 23:51:13 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
merged 3.4.1 release changes into trunk
Revision
4598 -
Directory Listing
Modified
Sun Dec 15 23:39:16 2013 UTC
(8 years, 5 months ago)
by
rschaa
Original Path:
trunk
Minor change to figure.
Replaced .pdf with .png
Revision
4597 -
Directory Listing
Modified
Sun Dec 15 22:36:24 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
unused variable fixed
Revision
4586 -
Directory Listing
Modified
Wed Dec 11 06:03:27 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
2D guassian smoothing of random data done.
Added more memory non-leaks to the supp file
Revision
4585 -
Directory Listing
Modified
Wed Dec 11 04:39:54 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
uint -> unsigned int
Revision
4584 -
Directory Listing
Modified
Wed Dec 11 04:24:15 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
more buildbot commit testing
Revision
4583 -
Directory Listing
Modified
Wed Dec 11 02:09:19 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
deliberate error to test buildbot
Revision
4582 -
Directory Listing
Modified
Wed Dec 11 02:08:41 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Added libpython version of suppressions to the aggressive file.
Rectangle now passes correct values around.
Random still to come.
Revision
4581 -
Directory Listing
Modified
Tue Dec 10 09:32:50 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Some more work on random
Added a more agressive (And smaller) supressions file for python
Revision
4580 -
Directory Listing
Modified
Tue Dec 10 06:10:44 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
fixed doc building relying on potentially missing python package installs (bug #739)
Revision
4579 -
Directory Listing
Modified
Tue Dec 10 04:08:20 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
adding porcupine's scons options file
Revision
4578 -
Directory Listing
Modified
Tue Dec 10 04:07:51 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
fixed gmsh Design deconstructor attempting to access non-existing members or files that were never created
also fixed a loose (non-)integer division for python3
Revision
4577 -
Directory Listing
Modified
Tue Dec 10 00:50:55 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
Undoing unintended commit of omp wrapper removal
Revision
4576 -
Directory Listing
Modified
Mon Dec 9 23:35:30 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
python3ified things, replaced mixed whitespace and xrange calls
Revision
4575 -
Directory Listing
Modified
Mon Dec 9 22:59:31 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Some more work on this
Revision
4574 -
Directory Listing
Modified
Mon Dec 9 04:29:44 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
some corrections
Revision
4573 -
Directory Listing
Modified
Mon Dec 9 03:42:50 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
HTI added
Revision
4572 -
Directory Listing
Modified
Sun Dec 8 00:54:37 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Some work on rectangle random MPI
Revision
4571 -
Directory Listing
Modified
Fri Dec 6 02:47:14 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
replaced a deliberate NULL dereference with abort() to satisfy lion-clang
Revision
4570 -
Directory Listing
Modified
Fri Dec 6 02:22:37 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
strain convention corrected.
Revision
4569 -
Directory Listing
Modified
Fri Dec 6 02:21:12 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
some update
Revision
4568 -
Directory Listing
Modified
Thu Dec 5 23:13:26 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Package building files for saucy
Revision
4567 -
Directory Listing
Modified
Thu Dec 5 09:00:23 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Options file for ubuntu 13.10
Revision
4566 -
Directory Listing
Modified
Thu Dec 5 01:02:47 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
fixed Dudley saveVTK crash on world size > 6 (mantis bug #738)
Revision
4565 -
Directory Listing
Modified
Wed Dec 4 06:42:30 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
and another typo fixed.
Revision
4564 -
Directory Listing
Modified
Wed Dec 4 06:34:14 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
VTI wave added
Revision
4563 -
Directory Listing
Modified
Wed Dec 4 06:30:59 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
4562 -
Directory Listing
Modified
Wed Dec 4 05:41:10 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
VTI wave added
Revision
4561 -
Directory Listing
Modified
Wed Dec 4 05:19:32 2013 UTC
(8 years, 5 months ago)
by
caltinay
Original Path:
trunk
Removed spurious print and some minor changes in inversion example.
Revision
4560 -
Directory Listing
Modified
Wed Dec 4 03:43:57 2013 UTC
(8 years, 5 months ago)
by
rschaa
Original Path:
trunk
Options file for ferret
Revision
4559 -
Directory Listing
Modified
Wed Dec 4 02:05:34 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
renamed design.Design to design.AbstractDesign as a more explicit/descriptive name, this will break any existing custom implementation until changed to match
updated gmsh.Design docstring to match that of the code
Revision
4558 -
Directory Listing
Modified
Tue Dec 3 22:37:38 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Moving MeshAdapter constructor call out of smartptr constructor. I think a throw in there would lead to undefined behaviour
Revision
4557 -
Directory Listing
Modified
Tue Dec 3 12:53:38 2013 UTC
(8 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed boost/intel issue in dudley and synced options file with module on
savanna.
Revision
4556 -
Directory Listing
Modified
Tue Dec 3 05:40:53 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
fixed mixed tabs/spaces and py2 prints breaking the python3 compiler
Revision
4555 -
Directory Listing
Modified
Tue Dec 3 03:54:20 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
updated doc install instructions to match that required
Revision
4554 -
Directory Listing
Modified
Tue Dec 3 03:45:56 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
documentation spelling and whitespace corrections, added some Design.setOptions params that were missing from the userguide
Revision
4553 -
Directory Listing
Modified
Mon Dec 2 07:18:02 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
clarification on receiver array
Revision
4552 -
Directory Listing
Modified
Mon Dec 2 06:13:47 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
Replaced non-visible (when built) unicode endash with single dash in user guide source
Revision
4551 -
Directory Listing
Modified
Mon Dec 2 03:32:23 2013 UTC
(8 years, 5 months ago)
by
sshaw
Original Path:
trunk
Fixed missing install keyword in instructions
Revision
4550 -
Directory Listing
Modified
Fri Nov 29 07:44:37 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
some modifications
Revision
4549 -
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Modified
Fri Nov 29 05:24:40 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
argument for lumping added.
Revision
4548 -
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Modified
Fri Nov 29 04:39:15 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
renamed file
Revision
4547 -
Directory Listing
Modified
Thu Nov 28 23:47:27 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Added msec unit
Revision
4546 -
Directory Listing
Modified
Thu Nov 28 05:30:48 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
sonic wave propagation added
Revision
4545 -
Directory Listing
Modified
Thu Nov 28 05:02:43 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
wave simulator base added
Revision
4544 -
Directory Listing
Modified
Thu Nov 28 04:01:46 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
wave simulator base added
Revision
4543 -
Directory Listing
Modified
Thu Nov 28 03:42:10 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
missing retirn statement added
Revision
4542 -
Directory Listing
Modified
Thu Nov 28 01:33:22 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Moving to new icc and associated modules.
Revision
4541 -
Directory Listing
Modified
Thu Nov 28 01:17:19 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
Ricker wavelet added
Revision
4540 -
Directory Listing
Modified
Thu Nov 28 01:06:10 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
segy writer added
Revision
4539 -
Directory Listing
Modified
Thu Nov 28 00:38:10 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
segy writer test added.
Revision
4538 -
Directory Listing
Modified
Thu Nov 28 00:37:48 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
segy writer added
Revision
4537 -
Directory Listing
Modified
Mon Nov 25 06:44:46 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
missing references and double labeling fixed.
Revision
4536 -
Directory Listing
Modified
Thu Nov 21 07:58:32 2013 UTC
(8 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Working around intelcc s seeming dislike of boost smart pointers
Revision
4535 -
Directory Listing
Modified
Wed Nov 20 06:37:53 2013 UTC
(8 years, 5 months ago)
by
gross
Original Path:
trunk
strong correlation joint inversion fixed.
Revision
4534 -
Directory Listing
Modified
Thu Nov 7 08:17:02 2013 UTC
(8 years, 6 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
4533 -
Directory Listing
Modified
Thu Nov 7 04:56:11 2013 UTC
(8 years, 6 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
4532 -
Directory Listing
Modified
Thu Nov 7 04:54:56 2013 UTC
(8 years, 6 months ago)
by
gross
Original Path:
trunk
strongly coupled joint inversion added
Revision
4531 -
Directory Listing
Modified
Mon Nov 4 02:09:05 2013 UTC
(8 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Removed strange looking dead code to resolve issue #710
Revision
4530 -
Directory Listing
Modified
Wed Oct 30 04:34:21 2013 UTC
(8 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fix in finley loadMesh which needs to call updateTagList() for all ranks, even
if a rank has no elements.
Revision
4529 -
Directory Listing
Modified
Fri Oct 25 01:23:27 2013 UTC
(8 years, 6 months ago)
by
caltinay
Original Path:
trunk
Ripley can now read grids in non-native byte order. This is in preparation for
Gocad Voxet import.
Revision
4528 -
Directory Listing
Modified
Sun Sep 29 23:12:19 2013 UTC
(8 years, 7 months ago)
by
caltinay
Original Path:
trunk
Added timeStepFormat option to saveESD (mantis 723).
Revision
4527 -
Directory Listing
Modified
Mon Sep 2 21:54:35 2013 UTC
(8 years, 8 months ago)
by
jfenwick
Original Path:
trunk
use enums
Revision
4526 -
Directory Listing
Modified
Mon Sep 2 06:34:25 2013 UTC
(8 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Single rank rectangle randoms.
Revision
4525 -
Directory Listing
Modified
Fri Aug 30 09:14:35 2013 UTC
(8 years, 8 months ago)
by
jfenwick
Original Path:
trunk
try this
Revision
4524 -
Directory Listing
Modified
Tue Aug 27 01:32:10 2013 UTC
(8 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Steube!!!!!
Revision
4523 -
Directory Listing
Modified
Mon Aug 26 23:04:07 2013 UTC
(8 years, 8 months ago)
by
caltinay
Original Path:
trunk
New working raijin options.
Revision
4522 -
Directory Listing
Modified
Mon Aug 26 22:15:26 2013 UTC
(8 years, 8 months ago)
by
caltinay
Original Path:
trunk
Newer versions of proj require specifying ellipsoid parameter.
Revision
4521 -
Directory Listing
Modified
Mon Aug 26 11:51:30 2013 UTC
(8 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Remove bool_t
Part of random.
Revision
4520 -
Directory Listing
Modified
Thu Aug 22 06:42:57 2013 UTC
(8 years, 8 months ago)
by
caltinay
Original Path:
trunk
Removing spurious usage of C compiler:
-Changed all scons tests to use C++ compiler
-Renamed paso profiling files (unused)
-Updated most options files (removal of options and updated comments)
Revision
4519 -
Directory Listing
Modified
Mon Aug 19 05:56:22 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Initial raijin options file.
Revision
4518 -
Directory Listing
Modified
Tue Aug 13 01:49:59 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
The line search step length caching should only be used within esys.downunder
inversions where the inverse Hessian approximation is not very good at the
moment.
Revision
4517 -
Directory Listing
Modified
Mon Aug 12 05:56:54 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Implemented caching (and relaxation) of line search step size alpha.
Experiments show a significant decrease in the number of iterations required
to converge with this change.
Revision
4516 -
Directory Listing
Modified
Thu Aug 8 05:41:49 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Implemented more CF conventions for the netCDF datasource.
Also added a check to LatLonToUTM to pass through coordinates that are already
projected.
Data gridded by GDAL is now understood.
Revision
4515 -
Directory Listing
Modified
Mon Aug 5 06:09:01 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Intel compiler mutter grumble
Revision
4514 -
Directory Listing
Modified
Mon Aug 5 03:28:44 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Look at the MPI
Revision
4513 -
Directory Listing
Modified
Mon Aug 5 00:57:34 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Dropping VSL random. Random data now uses more general routine.
Revision
4512 -
Directory Listing
Modified
Mon Jul 29 05:27:16 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
With current Intel compiler (13.5.192) on savanna any build with OMP and without MPI
will segfault in AbstractDomain->getPtr() for unknown reasons.
Trying a workaround for finley which can be adapted to dudley and ripley if it works.
Revision
4511 -
Directory Listing
Modified
Thu Jul 25 04:51:02 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Print a warning on savanna if dev-deps is not loaded when building and add
debug symbols by default.
Revision
4510 -
Directory Listing
Modified
Thu Jul 25 04:02:07 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Fixed a path which should fix unit tests.
Revision
4509 -
Directory Listing
Modified
Wed Jul 24 08:37:29 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fixed paths for utest.sh
Revision
4508 -
Directory Listing
Modified
Wed Jul 24 04:23:22 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Moving to escriptcore
Revision
4507 -
Directory Listing
Modified
Wed Jul 24 02:50:22 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
It begins
Revision
4506 -
Directory Listing
Modified
Wed Jul 24 01:28:42 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
run-escript -m now takes an optional argument to allow for different valgrind
tools (callgrind & memcheck supported at the moment).
Revision
4505 -
Directory Listing
Modified
Tue Jul 23 02:09:45 2013 UTC
(8 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Hopefully addresses mantis721
Revision
4504 -
Directory Listing
Modified
Mon Jul 22 02:04:34 2013 UTC
(8 years, 9 months ago)
by
caltinay
Original Path:
trunk
Fix to verbose parameter reporting in linear pdes
Revision
4503 -
Directory Listing
Modified
Wed Jul 17 05:27:36 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Skip new test with >1 rank.
Revision
4502 -
Directory Listing
Modified
Wed Jul 17 03:12:28 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Test reading IEEE8ByteReal data from ER Mapper files.
Revision
4501 -
Directory Listing
Modified
Wed Jul 17 00:02:26 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
This time I fixed the comment instead of the code for this special case.
Revision
4500 -
Directory Listing
Modified
Tue Jul 16 05:47:11 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
updated scons script
Revision
4499 -
Directory Listing
Modified
Tue Jul 16 05:42:19 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
finley: mainly const'ness fixes, some formatting.
Revision
4498 -
Directory Listing
Modified
Tue Jul 16 01:56:37 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Another special case fix.
Revision
4497 -
Directory Listing
Modified
Mon Jul 15 23:32:28 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Small fix for non-mpi build.
Revision
4496 -
Directory Listing
Modified
Mon Jul 15 06:53:44 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
finley (WIP):
-moved all of finley into its namespace
-introduced some shared pointers
-Mesh is now a class
-other bits and pieces...
Revision
4495 -
Directory Listing
Modified
Fri Jul 5 02:19:47 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Added support for more input data types in ER Mapper files.
Tests will follow soon.
Revision
4494 -
Directory Listing
Modified
Thu Jul 4 02:53:47 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Suppressions for savanna runs.
Revision
4493 -
Directory Listing
Modified
Wed Jul 3 06:32:11 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Fixed omp typo - gcc didn't pick it up...
Revision
4492 -
Directory Listing
Modified
Tue Jul 2 01:44:11 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Finley changes that were held back while in release mode - moved more stuff
into finley namespace.
Revision
4491 -
Directory Listing
Modified
Tue Jul 2 01:10:41 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Reintegrating changes from 3.4 branch (with changes).
Revision
4490 -
Directory Listing
Modified
Tue Jul 2 00:38:44 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
More python suppressions from savanna.
Revision
4489 -
Directory Listing
Modified
Fri Jun 28 00:05:31 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Moved to update 5 of intel libraries/compiler on savanna.
Revision
4483 -
Directory Listing
Modified
Wed Jun 26 02:36:15 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Added option to easily run escript with valgrind memcheck.
Revision
4482 -
Directory Listing
Modified
Tue Jun 25 05:20:01 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
More leak fixes and suppression file additions.
Revision
4481 -
Directory Listing
Modified
Mon Jun 24 06:22:27 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Hmm. That's a nasty undocumented "feature"...
Revision
4480 -
Directory Listing
Modified
Mon Jun 24 05:09:52 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
More valgrind suppressions and memory leak fixes identified in various places.
Revision
4479 -
Directory Listing
Modified
Thu Jun 20 10:54:09 2013 UTC
(8 years, 10 months ago)
by
caltinay
Original Path:
trunk
Missed a subtle fact about the stringstream constructor...
Revision
4478 -
Directory Listing
Modified
Thu Jun 20 06:34:02 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Moved appendRankToFilename to header within namespace to remove code duplication
and fixed memory leaks this way.
Revision
4477 -
Directory Listing
Modified
Thu Jun 20 02:41:28 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
escript: use scoped_array instead of scoped_ptr
ripley: netcdf returns a copy of an array so use scoped_array
downunder: s/Sperical/Spherical/
scripts: added a few more suppressions
Revision
4476 -
Directory Listing
Modified
Thu Jun 20 00:05:53 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Revised valgrind suppressions file with more generic Python & OpenMPI
suppressions.
Revision
4474 -
Directory Listing
Modified
Wed Jun 19 06:44:47 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Brought over leak fix, gcc 4.8 fix and mismatched new[]/delete fix from release
branch.
Revision
4465 -
Directory Listing
Modified
Mon Jun 17 06:49:39 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Remove superfluous \label
Revision
4463 -
Directory Listing
Modified
Mon Jun 17 06:11:32 2013 UTC
(8 years, 11 months ago)
by
gross
Original Path:
trunk
missing file
Revision
4462 -
Directory Listing
Modified
Mon Jun 17 04:12:06 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Raise exception if background magnetic field has not been set but is required.
Revision
4461 -
Directory Listing
Modified
Sun Jun 16 23:39:31 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
small py3 fix.
Revision
4455 -
Directory Listing
Modified
Thu Jun 13 03:13:36 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Removed \LG etc. from inversion document.
Documented new GOCAD Voxet writer. Needs to be mentioned in 'changes' too.
Revision
4454 -
Directory Listing
Modified
Thu Jun 13 03:12:17 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
More "delete test output files after checking"
Revision
4451 -
Directory Listing
Modified
Thu Jun 13 01:38:56 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
some pending changes on badger
Revision
4450 -
Directory Listing
Modified
Thu Jun 13 00:45:59 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
install docs - still waiting on Mac. Removing debug output.
Revision
4449 -
Directory Listing
Modified
Thu Jun 13 00:24:00 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Finishing off this end.
Revision
4448 -
Directory Listing
Modified
Wed Jun 12 23:05:12 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Only one rank should delete file in tests.
Revision
4447 -
Directory Listing
Modified
Wed Jun 12 13:55:53 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Clean up some generated test files.
Revision
4446 -
Directory Listing
Modified
Tue Jun 11 04:00:15 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
This should fix the py3 error...
Revision
4445 -
Directory Listing
Modified
Tue Jun 11 03:35:55 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Apply weight rescaling to input weights before the coordinate scaling.
Also skipping a check when more than 1 rank is used.
Revision
4444 -
Directory Listing
Modified
Mon Jun 10 07:55:05 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Converted IndexList to a std::list.
Revision
4443 -
Directory Listing
Modified
Mon Jun 10 04:50:27 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Update test to take into account changed height scale.
Revision
4442 -
Directory Listing
Modified
Fri Jun 7 07:04:44 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
cosmetic changes.
Revision
4441 -
Directory Listing
Modified
Fri Jun 7 02:23:49 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
finley now uses Data objects directly instead of going through the C wrapper.
Revision
4440 -
Directory Listing
Modified
Wed Jun 5 05:22:20 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
options files changes and install changes
Revision
4439 -
Directory Listing
Modified
Wed Jun 5 02:09:35 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
some work on install doco
Revision
4438 -
Directory Listing
Modified
Tue Jun 4 09:00:50 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Some changes to packaging
Revision
4437 -
Directory Listing
Modified
Tue Jun 4 05:37:18 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
finley:
-Removed obsolete reference files (OpenDX)
-Converted tag map to a std::map
-loosened tests to ignore tag order in file
-added some decorators for test skips
Revision
4436 -
Directory Listing
Modified
Mon Jun 3 05:37:31 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Tweak.
Revision
4435 -
Directory Listing
Modified
Mon Jun 3 04:27:57 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fixed a few scaling problems for non-cartesian coordinates in domainbuilder.
Revision
4434 -
Directory Listing
Modified
Mon Jun 3 00:43:29 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
tab-fixes and an indexing fix.
Revision
4433 -
Directory Listing
Modified
Fri May 31 12:09:58 2013 UTC
(8 years, 11 months ago)
by
gross
Original Path:
trunk
some clarifications on geodetic coordinates.
order of background magnetic flux density component has been corrected: input is now B_east, B_north, B_vertical.
Revision
4432 -
Directory Listing
Modified
Fri May 31 07:13:38 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
updated sconscript file
Revision
4431 -
Directory Listing
Modified
Fri May 31 07:09:03 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
finley ElementFile is now a class...
Revision
4430 -
Directory Listing
Modified
Fri May 31 00:38:42 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Don't panic - just forgot some brackets... D'oh!
Revision
4429 -
Directory Listing
Modified
Thu May 30 13:52:01 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Okay I now know that std::vector<bool> is evil, but WTF happens in this context???
It only crashes with more than one thread and more than one MPI process.
Revision
4428 -
Directory Listing
Modified
Thu May 30 06:39:10 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
finley's NodeFile is now a class.
Associated changes:
- use of some C++ constructs/functions/types (1st pass)
- removal of obsolete pointer check
- merging of some duplicated code
- ...
Revision
4426 -
Directory Listing
Modified
Mon May 27 06:14:19 2013 UTC
(8 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Testing commit
Revision
4425 -
Directory Listing
Modified
Mon May 27 05:44:28 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
svn server test and finley stuff.
Revision
4424 -
Directory Listing
Modified
Mon May 27 04:48:31 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
SVN server test.
Revision
4423 -
Directory Listing
Modified
Mon May 27 04:38:59 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
finley bits.
Revision
4422 -
Directory Listing
Modified
Fri May 24 04:42:29 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
s/jacobeans/jacobians and other bits and pieces.
Revision
4421 -
Directory Listing
Modified
Tue May 21 05:16:39 2013 UTC
(8 years, 11 months ago)
by
caltinay
Original Path:
trunk
Finley... there were actually some long-standing errors in the checks.
Revision
4420 -
Directory Listing
Modified
Mon May 20 07:12:15 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Enabled metis on guineapig.
Revision
4419 -
Directory Listing
Modified
Mon May 20 05:03:35 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Fixed a typo.
Revision
4417 -
Directory Listing
Modified
Mon May 20 02:15:47 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Retab regularizations.
Revision
4416 -
Directory Listing
Modified
Fri May 17 02:32:33 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Renaming a thing and adding some doco.
Revision
4415 -
Directory Listing
Modified
Fri May 17 00:33:02 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Commented unused var to make compiler happy.
Revision
4414 -
Directory Listing
Modified
Thu May 16 05:37:32 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Few more bits and pieces in finley.
Revision
4410 -
Directory Listing
Modified
Tue May 14 11:29:23 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Oops, I saw this coming.
Revision
4408 -
Directory Listing
Modified
Tue May 14 06:58:43 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Mostly no-op - trying to get some consistency in style while going through a
few files.
Also some minor changes related to C->C++ (e.g. no need to copy vector to pass
to functions etc.)
Revision
4407 -
Directory Listing
Modified
Tue May 14 05:17:24 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Added output function to arithmetic tuple
Revision
4406 -
Directory Listing
Modified
Tue May 14 02:54:09 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Removed references to pyvisi which disappeared a few releases ago...
Revision
4405 -
Directory Listing
Modified
Sun May 12 23:27:33 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Once again..
Revision
4404 -
Directory Listing
Modified
Sun May 12 23:25:10 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Retab forwardmodels
Revision
4400 -
Directory Listing
Modified
Fri May 10 04:05:00 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Uaaargh - the minimizer ate my files! Fixed reporting of iteration number in
callback.
Revision
4399 -
Directory Listing
Modified
Thu May 9 10:46:41 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
just fiddling
Revision
4398 -
Directory Listing
Modified
Thu May 9 08:42:44 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
support for supressing doco subpackages. fiddling with one of the imports to try to reduce the number of places where Data appears. Seriously it looks like we have 8 different Data classes
Revision
4397 -
Directory Listing
Modified
Thu May 9 06:17:15 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Added some doco to make it a little easier to work out what is going on.
Cleaned up some reST ugliness
Revision
4396 -
Directory Listing
Modified
Wed May 8 09:27:10 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
fix extraction script to pick up more classes. Stop models from importing escript into its namespace
Revision
4395 -
Directory Listing
Modified
Wed May 8 03:05:05 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Changed trade-off factors for example to avoid unit test failures due to
scaling issues.
Revision
4394 -
Directory Listing
Modified
Tue May 7 04:56:59 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Fixed rounding with lat/lon coordinates and removed stray print statements.
Revision
4393 -
Directory Listing
Modified
Mon May 6 03:35:48 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Correct indexing of forward models.
Revision
4392 -
Directory Listing
Modified
Mon May 6 02:18:33 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
More saveSilo checks.
Revision
4391 -
Directory Listing
Modified
Mon May 6 02:15:48 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Do not claim success when saving silo without silo support.
Revision
4390 -
Directory Listing
Modified
Mon May 6 01:59:34 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Fixed advertising of NetCdfData availability.
Revision
4389 -
Directory Listing
Modified
Mon May 6 01:52:05 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
retab coordinates.py
Revision
4387 -
Directory Listing
Modified
Thu May 2 00:46:49 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
The future is now
Revision
4386 -
Directory Listing
Modified
Tue Apr 30 02:58:02 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Add missing [0]
Revision
4385 -
Directory Listing
Modified
Mon Apr 29 06:03:30 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
It was bugging me
Revision
4384 -
Directory Listing
Modified
Sat Apr 27 05:09:37 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Partially complete new install instructions
Revision
4383 -
Directory Listing
Modified
Fri Apr 26 06:13:12 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Changes to install doco
Revision
4382 -
Directory Listing
Modified
Thu Apr 25 04:44:14 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Finalised ripley PDE assembly optimisation work.
Stats (combined Rectangle & Brick):
rev.4369: 7440 constants, 16985 lines, ~17m to compile w/ icc
NOW: 4038 constants, 13579 lines, ~6.5m to compile w/ icc
Runtime of unit tests a few seconds shorter as well :-)
Revision
4381 -
Directory Listing
Modified
Thu Apr 25 01:57:54 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
Prescribe data scale in tests to silence message.
Revision
4380 -
Directory Listing
Modified
Wed Apr 24 23:59:49 2013 UTC
(9 years ago)
by
jfenwick
Original Path:
trunk
Attempt to help windows
Revision
4379 -
Directory Listing
Modified
Wed Apr 24 20:31:19 2013 UTC
(9 years ago)
by
gross
Original Path:
trunk
more documentation on geodetic coordinates.
Revision
4378 -
Directory Listing
Modified
Wed Apr 24 06:21:42 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
ripley work: Almost done - one more round in Brick left....
Revision
4377 -
Directory Listing
Modified
Tue Apr 23 05:30:02 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
More work on ripley - Brick is under 10000 lines now.
Revision
4376 -
Directory Listing
Modified
Mon Apr 22 08:44:45 2013 UTC
(9 years ago)
by
gross
Original Path:
trunk
domumentation update on coordinate systems - part I
Revision
4375 -
Directory Listing
Modified
Mon Apr 22 05:35:52 2013 UTC
(9 years ago)
by
caltinay
Original Path:
trunk
More ripley code cleaning/optimisation.
Revision
4374 -
Directory Listing
Modified
Mon Apr 22 03:21:48 2013 UTC
(9 years ago)
by
gross
Original Path:
trunk
some typo fixed.
Revision
4373 -
Directory Listing
Modified
Mon Apr 22 03:16:24 2013 UTC
(9 years ago)
by
gross
Original Path:
trunk
more on geodetic coordinates
Revision
4371 -
Directory Listing
Modified
Fri Apr 19 08:47:57 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
As far as I can tell, passes unit tests on freebsd with non-default compiler==gcc46
Revision
4370 -
Directory Listing
Modified
Fri Apr 19 06:15:24 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
WIP: ripley hand-optimisation & further rules to generator
-> drastically reduced number of constants
-> compile time of Brick.cpp less than half of what it was on savanna
-> additional runtime savings
-> to be continued...
Revision
4369 -
Directory Listing
Modified
Fri Apr 19 02:32:34 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
fix problems revealed on freebsd
Revision
4368 -
Directory Listing
Modified
Thu Apr 18 02:26:35 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
put back std::
Revision
4367 -
Directory Listing
Modified
Wed Apr 17 09:55:25 2013 UTC
(9 years, 1 month ago)
by
plaub
Original Path:
trunk
Allow access to the individual components of the weighted sum cost function.
Revision
4366 -
Directory Listing
Modified
Wed Apr 17 04:41:16 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Be more careful with namespace & includes.
Revision
4365 -
Directory Listing
Modified
Wed Apr 17 03:46:22 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Skip tests for #ranks > 1 again.
Revision
4364 -
Directory Listing
Modified
Wed Apr 17 01:56:00 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Decorated some test cases.
Revision
4363 -
Directory Listing
Modified
Wed Apr 17 01:07:38 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
retab coordinates.py.
Revision
4362 -
Directory Listing
Modified
Tue Apr 16 04:37:13 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Implemented NumpyData downunder source (w/ tests).
Added check of data dimensionality to domainbuilder since data_dim must equal
domain_dim-1 at the moment.
Revision
4361 -
Directory Listing
Modified
Mon Apr 15 04:43:19 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
beginnings of an option file for macports
Revision
4360 -
Directory Listing
Modified
Mon Apr 15 02:41:42 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
some mismatched memory ops
Revision
4359 -
Directory Listing
Modified
Fri Apr 12 04:54:20 2013 UTC
(9 years, 1 month ago)
by
gross
Original Path:
trunk
more on coordinate systems
Revision
4358 -
Directory Listing
Modified
Fri Apr 12 04:54:00 2013 UTC
(9 years, 1 month ago)
by
gross
Original Path:
trunk
more on coordinate systems
Revision
4357 -
Directory Listing
Modified
Thu Apr 11 06:07:14 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
templated writeBinaryGrid and a bit of cleanup.
Revision
4356 -
Directory Listing
Modified
Tue Apr 9 00:15:59 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Retabbed file for py3 pleasure.
Revision
4355 -
Directory Listing
Modified
Fri Apr 5 07:25:02 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
start install guide overhall
Revision
4354 -
Directory Listing
Modified
Fri Apr 5 03:55:03 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
adding option files for distros
Revision
4353 -
Directory Listing
Modified
Fri Apr 5 00:14:35 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
For some reason std::isnan<float> is not available on NCI so changed this
to ::isnan. Added options file for NCI vayu.
Revision
4349 -
Directory Listing
Modified
Wed Apr 3 09:37:54 2013 UTC
(9 years, 1 month ago)
by
gross
Original Path:
trunk
first contributions for geodeic coordinates
Revision
4348 -
Directory Listing
Modified
Tue Apr 2 07:15:43 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Reapply some of the spelling fixes that got lost....
Revision
4347 -
Directory Listing
Modified
Tue Apr 2 04:58:44 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Fixed some const char* conversions
Revision
4346 -
Directory Listing
Modified
Tue Apr 2 04:46:45 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Bringing the changes from doubleplusgood branch.
Can't merge directly because svn doesn't transfer changes to renamed files (mutter grumble).
Revision
4344 -
Directory Listing
Modified
Wed Mar 27 07:58:34 2013 UTC
(9 years, 1 month ago)
by
gross
Original Path:
trunk
fix potential at botttom added.
Revision
4342 -
Directory Listing
Modified
Tue Mar 26 02:31:41 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
get rid of the escript link that snuck in somehow. deal with cases where the root of the install is in a path with spaces in it.
Revision
4341 -
Directory Listing
Modified
Mon Mar 25 04:01:25 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
GOCAD Voxet writer in weipa.
Revision
4340 -
Directory Listing
Modified
Fri Mar 22 04:38:36 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
added ripley method that returns grid parameters as python tuple.
Revision
4339 -
Directory Listing
Modified
Fri Mar 22 02:25:37 2013 UTC
(9 years, 1 month ago)
by
jfenwick
Original Path:
trunk
options file for all standalone builds
Revision
4337 -
Directory Listing
Modified
Fri Mar 22 00:05:25 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Detect a few more byte swap/endianness headers and silence output from
'detectModule' scons helper
Revision
4334 -
Directory Listing
Modified
Thu Mar 21 06:00:14 2013 UTC
(9 years, 1 month ago)
by
caltinay
Original Path:
trunk
Preparations for Voxet (GOCAD) binary grid output + code clean up.
Changed node id's order to remove code duplication in weipa.
More work to do...
Revision
4326 -
Directory Listing
Modified
Wed Mar 20 02:50:46 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Removed stray print statement.
Revision
4323 -
Directory Listing
Modified
Tue Mar 19 00:17:36 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Bringing across changes from release3.3.1. (Version names are set back to Development).
Revision
4322 -
Directory Listing
Modified
Mon Mar 18 00:09:02 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Test for calling I/O redirect or not was wrong... fixed.
Revision
4320 -
Directory Listing
Modified
Fri Mar 15 02:57:15 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Moved file writer helper class to esysUtils and made it header-only. It will
be used by ripley writer methods.
Revision
4311 -
Directory Listing
Modified
Tue Mar 12 04:26:24 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
gracefully end if pyproj is not installed
Revision
4310 -
Directory Listing
Modified
Tue Mar 12 03:23:26 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
examples don't FAIL if tool is not installed
Revision
4309 -
Directory Listing
Modified
Mon Mar 11 05:07:39 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Temporary workaround for sys.exit() causing unclean exit with MPI.
Revision
4308 -
Directory Listing
Modified
Mon Mar 11 02:47:59 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Added missing import.
Revision
4307 -
Directory Listing
Modified
Mon Mar 11 02:46:17 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
shake29->weasel
Revision
4306 -
Directory Listing
Modified
Mon Mar 11 02:36:55 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
python 3 compat.
Revision
4303 -
Directory Listing
Modified
Mon Mar 11 01:17:39 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Enabled index in inversion doc. Eliminated some typos.
Revision
4301 -
Directory Listing
Modified
Mon Mar 11 00:52:31 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Updated copyright on doco that has not existed all the way back to 2003.
Added Azadeh and Vince to credits
Revision
4300 -
Directory Listing
Modified
Mon Mar 11 00:50:19 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Always invoke external python to check for modules. For some reason scipy
detection did not work properly using the old way.
Revision
4299 -
Directory Listing
Modified
Mon Mar 11 00:40:09 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Exit with a warning in example files that require unavailable scipy.
bollide->hamster
added warnings to scons for scipy and gdal
Revision
4298 -
Directory Listing
Modified
Mon Mar 11 00:03:22 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
changing Magnetic Images
Revision
4297 -
Directory Listing
Modified
Fri Mar 8 06:14:17 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Removing the sphinx spelling checker since it breaks my build. Updated the genrst script so that non-package modules still show up in the doco. Still needs a bit of a tweak in the long term
Revision
4296 -
Directory Listing
Modified
Fri Mar 8 05:37:44 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Oopsie
Revision
4295 -
Directory Listing
Modified
Fri Mar 8 04:42:01 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
de-cluttered sconstruct a bit and fixed a script.
Revision
4294 -
Directory Listing
Modified
Fri Mar 8 03:37:10 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
text for magnetic inversion tutorial added.
Revision
4293 -
Directory Listing
Modified
Fri Mar 8 00:07:07 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
fixing sneaky bug in grouptest
Revision
4292 -
Directory Listing
Modified
Thu Mar 7 22:39:32 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Broken? It ain't broken ;-) Sorry Joel.
Revision
4290 -
Directory Listing
Modified
Thu Mar 7 07:04:29 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Ignore __pycache__ when generating sphinx docs
Revision
4289 -
Directory Listing
Modified
Thu Mar 7 07:02:59 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
including inversion examples in bundles and tests
Revision
4288 -
Directory Listing
Modified
Thu Mar 7 06:35:14 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
some modifications clarifying the B field orientation
Revision
4287 -
Directory Listing
Modified
Thu Mar 7 05:26:44 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Removed simpleGeoMagnetic field function from doco and example source.
Revision
4286 -
Directory Listing
Modified
Thu Mar 7 04:28:11 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Assorted spelling fixes.
Revision
4285 -
Directory Listing
Modified
Thu Mar 7 01:08:43 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Corrected some spelling.
Revision
4284 -
Directory Listing
Modified
Thu Mar 7 00:43:48 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Replaced dummy implementations by pure virtual methods.
Revision
4283 -
Directory Listing
Modified
Thu Mar 7 00:11:36 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Minor epydoc fixes.
Revision
4282 -
Directory Listing
Modified
Wed Mar 6 08:33:59 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
first contribution for the magnetic cookbook.
Revision
4281 -
Directory Listing
Modified
Wed Mar 6 07:08:36 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
typo - sorry
Revision
4279 -
Directory Listing
Modified
Wed Mar 6 05:10:44 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Update to API doco and separate section for multiple data sets.
Revision
4278 -
Directory Listing
Modified
Wed Mar 6 04:45:40 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
joint inversion chapter in part I replaced by announcment
Revision
4277 -
Directory Listing
Modified
Wed Mar 6 01:30:41 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Implemented claimed support for mixing data with different resolutions.
Revision
4274 -
Directory Listing
Modified
Tue Mar 5 06:10:17 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Small fix to example file.
Revision
4273 -
Directory Listing
Modified
Tue Mar 5 04:14:44 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
More doco updates and change to the return value of minimizers.
Revision
4272 -
Directory Listing
Modified
Tue Mar 5 01:06:45 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Finished gravity part in cookbook. Started review of class descriptions.
Revision
4271 -
Directory Listing
Modified
Mon Mar 4 05:59:59 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Finished data-with-holes section and added a few more notes about optional
arguments further up. Changed example scripts to show usage of special
features.
Revision
4270 -
Directory Listing
Modified
Mon Mar 4 04:01:28 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Corrected test for modified handling of ER Mapper origin.
Revision
4269 -
Directory Listing
Modified
Mon Mar 4 00:54:29 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Some more work.
Revision
4268 -
Directory Listing
Modified
Mon Mar 4 00:41:08 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
some citation fixed.
Revision
4267 -
Directory Listing
Modified
Fri Mar 1 04:50:54 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Updated inversion example scripts, added ER Mapper data, checked results
and corrected some issues. Cookbook does not reflect the changes yet.
Revision
4266 -
Directory Listing
Modified
Fri Mar 1 01:37:41 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Deleted old data files.
Revision
4265 -
Directory Listing
Modified
Fri Mar 1 00:52:30 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
because we arent using python 2.5 anymore
Revision
4264 -
Directory Listing
Modified
Thu Feb 28 11:32:57 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Trying
Revision
4263 -
Directory Listing
Modified
Thu Feb 28 05:59:04 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
No more xrange in downunder.
Revision
4262 -
Directory Listing
Modified
Thu Feb 28 05:49:11 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
removed use of xrange and hack.
Revision
4260 -
Directory Listing
Modified
Wed Feb 27 04:58:47 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
adding gravity and magnetic data files which used for inversions
Revision
4259 -
Directory Listing
Modified
Wed Feb 27 03:52:35 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
cookmagnetic
Revision
4258 -
Directory Listing
Modified
Wed Feb 27 03:50:08 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
cookmagnetic
Revision
4256 -
Directory Listing
Modified
Wed Feb 27 03:25:05 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
changing some magnetic result image names
Revision
4255 -
Directory Listing
Modified
Wed Feb 27 03:06:21 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Hopefully, this will address the interpolation problems.
New canInterpolate() function exposed to python which calls probeInterpolation
AbstractDomain now has an additional virtual.
preferredIntrpolationOnDomain()
This will return 0 if interpolation is impossible, 1 if possible and preferred.
It will return -1 if interpolation is possible and preferred in the
oposite direction.
A value of -1 does not say that the proposed interpolation is possible or not.
Rather it indicates "please use the other way".
If you really _need_ to test it that way, use probeInterpolationOnDomain
Revision
4254 -
Directory Listing
Modified
Wed Feb 27 02:59:29 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
added joint result
Revision
4253 -
Directory Listing
Modified
Wed Feb 27 02:55:32 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
removed joint result
Revision
4252 -
Directory Listing
Modified
Wed Feb 27 02:49:06 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
added magnetic inversion results
Revision
4251 -
Directory Listing
Modified
Wed Feb 27 02:47:10 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
removed old magnetic images
This line, and those below, will be ignored--
D QLDMagMu10Contour.png
D QLDMagMu01Slice.png
D QLDMagMu1Contour.png
D QLDMagMu100Slice.png
D QLDMagMu01Contour.png
D QLDMagMu10Slice.png
D QLDMagMu100Contour.png
D QLDMagMu1Slice.png
Revision
4250 -
Directory Listing
Modified
Wed Feb 27 00:26:12 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Fix for joint example.
Revision
4249 -
Directory Listing
Modified
Tue Feb 26 01:01:59 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
s/shake75/bollide. Made build_full succeed without cppunit.
Revision
4248 -
Directory Listing
Modified
Mon Feb 25 05:53:55 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
This should not trigger the build
Revision
4246 -
Directory Listing
Modified
Mon Feb 25 05:49:49 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
still testing
Revision
4245 -
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Modified
Mon Feb 25 05:45:06 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
again
Revision
4244 -
Directory Listing
Modified
Mon Feb 25 05:37:50 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
More testing and a target in scons for the pdf docs
Revision
4243 -
Directory Listing
Modified
Mon Feb 25 05:33:01 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
For testing buildbot
Revision
4242 -
Directory Listing
Modified
Mon Feb 25 03:16:14 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Allow pure virtual classes to be exported to python.
Temporary fix for a ripley interpolation issue
Revision
4241 -
Directory Listing
Modified
Fri Feb 22 11:35:11 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Added py3 config
Revision
4240 -
Directory Listing
Modified
Fri Feb 22 01:51:19 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
options file for a clang buildbot
Revision
4239 -
Directory Listing
Modified
Fri Feb 22 00:35:01 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
initialize utm zone in er mapper reader.
Revision
4238 -
Directory Listing
Modified
Thu Feb 21 09:58:49 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
fixed some relative imports and uses of xrange
Revision
4237 -
Directory Listing
Modified
Thu Feb 21 07:27:36 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixed bad tabbing so this revision works with python3 or clang.
(clang at least up to the tests which need pyproj)
Revision
4236 -
Directory Listing
Modified
Thu Feb 21 05:05:05 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Noted that saveDX and saveVTK have been removed.
Revision
4235 -
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Modified
Thu Feb 21 04:05:53 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
small fix.
Revision
4234 -
Directory Listing
Modified
Thu Feb 21 04:00:31 2013 UTC
(9 years, 2 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
4233 -
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Modified
Thu Feb 21 02:00:09 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
updated content file (wishlist). Added byte swapping to plotter.
Revision
4232 -
Directory Listing
Modified
Wed Feb 20 08:31:31 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixed the WrappedArray class so it doesn't generate warnings
Revision
4231 -
Directory Listing
Modified
Wed Feb 20 07:41:52 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Updating doco for pyproj and a few other minor inconsistancies. The inversion doco still needs to mention them.
Revision
4230 -
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Modified
Wed Feb 20 03:57:37 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Removed some superfluous files.
Revision
4229 -
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Modified
Wed Feb 20 03:39:46 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
cookgravity
Revision
4228 -
Directory Listing
Modified
Wed Feb 20 03:34:07 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Tweak & fix for data plotters
Revision
4227 -
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Modified
Wed Feb 20 03:10:50 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
ER Mapper data source updates.
Revision
4226 -
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Modified
Wed Feb 20 03:07:36 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
typo.
Revision
4225 -
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Modified
Wed Feb 20 02:45:09 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
moving images to figures folder
Revision
4224 -
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Modified
Wed Feb 20 02:34:18 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
changing images in cook gravity
Revision
4223 -
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Modified
Wed Feb 20 01:47:26 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
$#@%%^@(!
Revision
4222 -
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Modified
Wed Feb 20 01:27:40 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Disabled docs about NonlinearPDE and removed inversion from user's guide.
Revision
4221 -
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Modified
Wed Feb 20 01:24:29 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
The numpy 1.7 macro does not help since the new style API/macros are not
present in 1.6. So when compiling with numpy 1.7 werror needs to be set to
False.
Revision
4220 -
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Modified
Wed Feb 20 01:17:30 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
adding gravity images with color bar in a folder
Revision
4219 -
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Modified
Wed Feb 20 00:26:19 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Not sure why, but this fixes all failures in the linearPDE tests with ripley.
Revision
4218 -
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Modified
Tue Feb 19 06:11:35 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Added gravity data in ER Mapper format and inversion script for it.
Revision
4217 -
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Modified
Tue Feb 19 06:09:51 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
numpy 1.7 introduced a warning for deprecation of certain APIs. We have to
acknowledge that to get rid of the warning...
Revision
4216 -
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Modified
Tue Feb 19 05:15:38 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Report if pyproj is available.
Revision
4215 -
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Modified
Tue Feb 19 02:52:40 2013 UTC
(9 years, 2 months ago)
by
azadeh
Original Path:
trunk
adding gravity coarse data
Revision
4214 -
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Modified
Tue Feb 19 02:42:43 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Added capstartfalse/true to escript cookbook figures with no caption so
the build succeeds with the hypcap package enabled.
Revision
4213 -
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Modified
Tue Feb 19 01:16:29 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Some cleanup and more consistent logging.
Revision
4212 -
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Modified
Tue Feb 19 00:11:28 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Even friendlier message when pyproj is not installed but required.
Revision
4211 -
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Modified
Mon Feb 18 23:54:46 2013 UTC
(9 years, 2 months ago)
by
caltinay
Original Path:
trunk
Implemented interpolation from Reduced[Face]Elements to [Face]Elements and
changed regularization to compute gradient on Function instead of
ReducedFunction. Results differ slightly so this should help with the accuracy.
Revision
4210 -
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Modified
Mon Feb 18 23:47:09 2013 UTC
(9 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Added suggests for new libraries used by downunder.
Revision
4209 -
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Modified
Mon Feb 18 06:00:56 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed joint example file, added ER Mapper plot script, updated content file.
Revision
4208 -
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Modified
Mon Feb 18 05:02:28 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
rename so the poor case-sensitive mac can checkout
Revision
4207 -
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Modified
Mon Feb 18 03:17:11 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
adding bar for gravity image
Revision
4206 -
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Modified
Sun Feb 17 23:32:07 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Import minimizers by default so the exception classes are exposed.
Revision
4205 -
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Modified
Fri Feb 15 06:02:07 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Work on inversion cookbook. Also tweak to hyperref and a few more references.
Revision
4204 -
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Modified
Thu Feb 14 08:06:26 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
more on gravity and cleaning up file names
Revision
4203 -
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Modified
Thu Feb 14 07:05:58 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
Clarification of file names.
Revision
4202 -
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Modified
Thu Feb 14 06:53:41 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
Some adjustments to the sturture and naming
Revision
4201 -
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Modified
Thu Feb 14 06:40:01 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
DomainBuilder now ensures all data is in same UTM zone (with test).
Revision
4200 -
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Modified
Thu Feb 14 04:35:38 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
adding content folder to show input files
Revision
4199 -
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Modified
Wed Feb 13 08:39:05 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
more in the inversion cook-book
Revision
4198 -
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Modified
Wed Feb 13 06:49:10 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
name adjustments and remove unused files
Revision
4197 -
Directory Listing
Modified
Wed Feb 13 05:53:19 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Changes to netCDF data source:
-removed assumptions
-added parameters to override data/error variable names, scale factor and null
value.
Revision
4196 -
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Modified
Wed Feb 13 00:58:37 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Small fix so ERS files with DOS newline are parsed correctly.
Revision
4195 -
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Modified
Tue Feb 12 04:08:19 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Fixing case mismatch that was preventing bibtex from building
Revision
4194 -
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Modified
Tue Feb 12 03:04:17 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
Fixing some naming clashes
Revision
4193 -
Directory Listing
Modified
Tue Feb 12 00:59:49 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
reference
Revision
4192 -
Directory Listing
Modified
Tue Feb 12 00:28:47 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
problem with nc reader for dudley and finley fixed: the reader builds now the taginuse lists.
Revision
4191 -
Directory Listing
Modified
Mon Feb 11 08:22:47 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
more on gravity cook book
Revision
4190 -
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Modified
Mon Feb 11 05:10:00 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
unit gal added
Revision
4189 -
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Modified
Mon Feb 11 04:17:00 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
some images added
Revision
4188 -
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Modified
Mon Feb 11 01:51:22 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Removed unneeded (large) result files.
Revision
4187 -
Directory Listing
Modified
Mon Feb 11 01:05:10 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
adding gravity magnetic and joint inversion files in netcdf format
Revision
4186 -
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Modified
Mon Feb 11 00:47:34 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
adding gravity plots with different Mu
Revision
4185 -
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Modified
Fri Feb 8 09:06:21 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
modifications to cookbook
Revision
4184 -
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Modified
Fri Feb 8 04:33:48 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
new images in cookgravity
Revision
4183 -
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Modified
Mon Feb 4 02:58:02 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
joint result image updated
Revision
4182 -
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Modified
Fri Feb 1 02:29:53 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Revised Intro/Overview text.
Revision
4181 -
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Modified
Fri Feb 1 02:16:56 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
cook joint
Revision
4180 -
Directory Listing
Modified
Thu Jan 31 04:58:16 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
updating
Revision
4179 -
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Modified
Thu Jan 31 04:30:50 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
More doco.
Revision
4178 -
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Modified
Thu Jan 31 03:18:56 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Some more doco.
Revision
4177 -
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Modified
Thu Jan 31 02:23:02 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
cook joint and magnetic
Revision
4176 -
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Modified
Wed Jan 30 05:30:30 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Removed tests that are known not to work.
Revision
4175 -
Directory Listing
Modified
Wed Jan 30 05:01:50 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
joint netcdf example and some minor fixes to other example/test case.
Revision
4174 -
Directory Listing
Modified
Wed Jan 30 03:21:27 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
ripley's readBinaryGrid and readNcGrid now filter out NaN leaving the relevant
destination data points untouched.
Revision
4173 -
Directory Listing
Modified
Wed Jan 30 03:05:01 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Do not use -ffast-math by default (see mantis 691).
Revision
4172 -
Directory Listing
Modified
Wed Jan 30 01:24:03 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
cookjoint
--This line, and those below, will be ignored
M CookJoint.tex
Revision
4168 -
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Modified
Fri Jan 25 07:31:47 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Release title and dep fix
Revision
4167 -
Directory Listing
Modified
Fri Jan 25 05:21:30 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
fixes for doco for earlier releases
Revision
4166 -
Directory Listing
Modified
Fri Jan 25 04:18:45 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
gravity
Revision
4165 -
Directory Listing
Modified
Fri Jan 25 01:07:57 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
joint
Revision
4164 -
Directory Listing
Modified
Thu Jan 24 05:34:13 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
netcdf data source description.
Revision
4163 -
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Modified
Thu Jan 24 05:03:48 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
changing
Revision
4162 -
Directory Listing
Modified
Thu Jan 24 03:53:19 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added missing example file to display netcdf data.
Revision
4161 -
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Modified
Thu Jan 24 03:22:38 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
modifying
Revision
4160 -
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Modified
Thu Jan 24 00:13:32 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Moved figures to subdir and added more DataSource doco.
Revision
4159 -
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Modified
Thu Jan 24 00:05:28 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
dding magnetic images
Revision
4158 -
Directory Listing
Modified
Wed Jan 23 07:02:21 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Write output even when max iterations reached.
Revision
4157 -
Directory Listing
Modified
Wed Jan 23 03:52:07 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
added magnetic netcdf example (no data yet).
Revision
4156 -
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Modified
Wed Jan 23 03:45:14 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
changes in document
Revision
4155 -
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Modified
Wed Jan 23 00:05:03 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Removed some incorrect ACcESS copyright attributions [2010 or later] since ACcESS did not exist at that point. Also added 2013 to a couple of files which I missed.
Revision
4154 -
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Modified
Tue Jan 22 09:30:23 2013 UTC
(9 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Round 1 of copyright fixes
Revision
4153 -
Directory Listing
Modified
Tue Jan 22 01:57:50 2013 UTC
(9 years, 3 months ago)
by
gross
Original Path:
trunk
no driver example added. Doe not work yet.
Revision
4152 -
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Modified
Tue Jan 22 00:29:03 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Moved figures to subdirectory.
Revision
4151 -
Directory Listing
Modified
Tue Jan 22 00:23:39 2013 UTC
(9 years, 3 months ago)
by
azadeh
Original Path:
trunk
update joint and magnetic cookbook.
Revision
4150 -
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Modified
Mon Jan 21 04:14:24 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Raise an exception if some methods are called after domain creation.
Revision
4149 -
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Modified
Mon Jan 21 02:03:31 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Checkpoint - DomainBuilder documented.
Revision
4148 -
Directory Listing
Modified
Mon Jan 21 01:04:20 2013 UTC
(9 years, 3 months ago)
by
caltinay
Original Path:
trunk
Updated netcdf gravity inversion example.
Revision
4147 -
Directory Listing
Modified
Fri Jan 18 03:35:15 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
added some words in the overview and clean-up of bib.
Revision
4146 -
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Modified
Fri Jan 18 01:36:49 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
some remarks on the class dependency added.
Revision
4145 -
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Modified
Fri Jan 18 00:51:49 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Checkpoint.
Revision
4144 -
Directory Listing
Modified
Fri Jan 18 00:34:21 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
new diagrams
Revision
4143 -
Directory Listing
Modified
Thu Jan 17 08:48:47 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
documentation of minimizer update plus clarification of notations on the code
Revision
4142 -
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Modified
Tue Jan 15 09:06:06 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
documentation of inversion cost function added
Revision
4141 -
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Modified
Tue Jan 15 04:11:12 2013 UTC
(9 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Fixed to scripts to allow doco to build in pbuilder.
Looking for libraries in the place they were built is a good I've found.
Revision
4140 -
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Modified
Tue Jan 15 02:34:41 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Updated example inversion files.
Revision
4139 -
Directory Listing
Modified
Tue Jan 15 00:13:28 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Added L-BFGS reference and some minor changes.
Revision
4138 -
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Modified
Mon Jan 14 23:57:00 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
some rearrangement of part II
Revision
4137 -
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Modified
Mon Jan 14 22:59:13 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Disabled another test.
Revision
4136 -
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Modified
Mon Jan 14 05:20:34 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
clarifications about cartesian domain
Revision
4135 -
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Modified
Mon Jan 14 04:54:14 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Fixed test file.
Revision
4134 -
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Modified
Sun Jan 13 23:24:35 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Removed failing test.
Revision
4133 -
Directory Listing
Modified
Fri Jan 11 06:41:10 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
some documentation on Inversion Cost function added.
Revision
4132 -
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Modified
Fri Jan 11 05:46:49 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Range of epydoc fixes.
Revision
4131 -
Directory Listing
Modified
Fri Jan 11 03:54:16 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
documentaion of inversion driver API added.
Revision
4130 -
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Modified
Thu Jan 10 03:38:17 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Do not end document after chapter :-)
Revision
4129 -
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Modified
Thu Jan 10 03:30:45 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Fixed small typo
Revision
4128 -
Directory Listing
Modified
Thu Jan 10 02:04:08 2013 UTC
(9 years, 4 months ago)
by
caltinay
Original Path:
trunk
Use fixed low number of iterations for the callback test.
Revision
4127 -
Directory Listing
Modified
Thu Jan 10 00:46:56 2013 UTC
(9 years, 4 months ago)
by
azadeh
Original Path:
trunk
add documentation for gravity.
Revision
4126 -
Directory Listing
Modified
Tue Jan 8 02:37:48 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
some work on the level set class. no testing yet.
Revision
4125 -
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Modified
Wed Jan 2 06:15:00 2013 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
some fixes in the inversion set-up
Revision
4124 -
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Modified
Fri Dec 21 01:35:43 2012 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
joint inversion added
Revision
4123 -
Directory Listing
Modified
Thu Dec 20 23:47:55 2012 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
small fix
Revision
4122 -
Directory Listing
Modified
Thu Dec 20 05:42:35 2012 UTC
(9 years, 4 months ago)
by
gross
Original Path:
trunk
More work towards joint inversion. There is now one class for inversion cost function which can handle all relevant cases
for a single model inversion, cross gradient case and functional dependence of physical parameters.
Revision
4121 -
Directory Listing
Modified
Wed Dec 19 00:24:50 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
changes to the boundary conditions.
Revision
4120 -
Directory Listing
Modified
Tue Dec 18 04:49:37 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
some improvements to the robutness of the minimizer:
a break down in the orthogonalization is hnadles via a restart.
a restart can now be set manually
the iteration throughs now an exception in case of failure.
It is also possible to set the density anomaly to zero for regions below a certain depth.
Revision
4119 -
Directory Listing
Modified
Mon Dec 17 04:53:15 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
some adjustments to the documentation
Revision
4118 -
Directory Listing
Modified
Mon Dec 17 00:50:47 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Some tweaks for auto building - need more though
Revision
4117 -
Directory Listing
Modified
Fri Dec 14 07:29:35 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
some adjustments with names
Revision
4116 -
Directory Listing
Modified
Fri Dec 14 07:21:14 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
tests for oscillatory data added.
Revision
4115 -
Directory Listing
Modified
Fri Dec 14 04:48:48 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
terminolgy for magnetic flux density clarified. clean up on synthetic data
Revision
4114 -
Directory Listing
Modified
Fri Dec 14 04:24:46 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Time to remove deprecated saveVTK/DX methods from Data and Domain.
Revision
4113 -
Directory Listing
Modified
Fri Dec 14 01:54:53 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
shake29 options file.
Revision
4112 -
Directory Listing
Modified
Fri Dec 14 01:51:30 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added simple gravity inversion example to be included in cookbook.
Revision
4111 -
Directory Listing
Modified
Fri Dec 14 01:46:13 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixed the genrst script to be executable
Revision
4110 -
Directory Listing
Modified
Fri Dec 14 01:21:33 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixed to use whatever python is leading the path.
Disabled epydoc
Revision
4109 -
Directory Listing
Modified
Fri Dec 14 01:08:52 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed tests.
Revision
4108 -
Directory Listing
Modified
Thu Dec 13 06:38:11 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Changed methods to add padding areas.
Revision
4107 -
Directory Listing
Modified
Thu Dec 13 05:54:03 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Now building doc using sphinx. Doc builds will fail until I get stuff installed on savanna
Revision
4106 -
Directory Listing
Modified
Thu Dec 13 05:08:44 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
some clarification on how to handle back ground magnetic field plus renaming of SyntheticData
Revision
4105 -
Directory Listing
Modified
Thu Dec 13 04:11:59 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Updated test to reflect interface changes.
Revision
4104 -
Directory Listing
Modified
Thu Dec 13 03:30:23 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Ensuring we are using new-style classes
This may not be strictly necessary since our code does not depend on the difference.
Revision
4103 -
Directory Listing
Modified
Wed Dec 12 07:03:02 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Got rid of some unwanted sidebar elts. Correctly detect standalone functions exposed by boost
Revision
4102 -
Directory Listing
Modified
Wed Dec 12 06:17:03 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
more improvements on rescaling of weights. We now try to balance the gradients rather than the values.
Revision
4101 -
Directory Listing
Modified
Wed Dec 12 04:22:58 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
First attempt at a sphinx generated API docs
In the project root:
mkdir doctest
python doc/sphinx_api/genrst.py
cd doctest
make html
should do
Revision
4100 -
Directory Listing
Modified
Tue Dec 11 06:55:20 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
minimizer uses now a relative change to solution to terminate iteration. Gravity still has problems
Revision
4099 -
Directory Listing
Modified
Tue Dec 11 04:04:47 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
Clarification of terminology and scaling.
Joint inversion is not working yet.
Revision
4098 -
Directory Listing
Modified
Fri Dec 7 03:45:20 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Unbroke my breakage.
Revision
4097 -
Directory Listing
Modified
Fri Dec 7 01:18:35 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Minor edits.
Revision
4096 -
Directory Listing
Modified
Thu Dec 6 04:05:29 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
temporary doc fixes and moving tsunami out of the way
Revision
4095 -
Directory Listing
Modified
Wed Dec 5 05:32:22 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
A bit of doco cleanup.
Revision
4094 -
Directory Listing
Modified
Mon Dec 3 23:28:38 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed typo.
Revision
4093 -
Directory Listing
Modified
Fri Nov 30 04:52:01 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
There is now a coherent implementation of gravity and magnetic forward model including an update of the user's guide.
Revision
4092 -
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Modified
Thu Nov 29 10:42:39 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Minor change. Test commit.
Revision
4091 -
Directory Listing
Modified
Mon Nov 26 10:27:29 2012 UTC
(9 years, 5 months ago)
by
gross
Original Path:
trunk
Some terminology introduced and magnetic inversion corrected.
Revision
4090 -
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Modified
Mon Nov 26 03:51:04 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Savanna tweaks.
Revision
4089 -
Directory Listing
Modified
Fri Nov 23 04:41:54 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Switch to new toolchain on Savanna.
Revision
4088 -
Directory Listing
Modified
Thu Nov 22 23:31:37 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Use kronecker, not numpy's identity in wave (why do these issues come up now?)
Revision
4087 -
Directory Listing
Modified
Thu Nov 22 22:28:01 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
Moved matplotlib imports in test scripts before escript since there is an
import chain which pulls it so the use() function has no effect.
Revision
4086 -
Directory Listing
Modified
Wed Nov 21 02:48:12 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Doco for 1D interpolation [resolves #631]
Revision
4085 -
Directory Listing
Modified
Tue Nov 20 07:04:11 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
nonuniformInterolate and Slope added.
Doco later
Revision
4084 -
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Modified
Tue Nov 20 06:22:07 2012 UTC
(9 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Adding some linebreaks
Revision
4083 -
Directory Listing
Modified
Mon Nov 19 22:19:42 2012 UTC
(9 years, 5 months ago)
by
caltinay
Original Path:
trunk
removed manually set weights from scripts.
Revision
4082 -
Directory Listing
Modified
Mon Nov 19 06:16:06 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Minor changes to install doco
Revision
4081 -
Directory Listing
Modified
Mon Nov 19 02:35:18 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Updated unit test to test LinearMapping instead of old ScalingMapping
Revision
4080 -
Directory Listing
Modified
Mon Nov 19 01:45:38 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Epydoc fixes
Revision
4079 -
Directory Listing
Modified
Fri Nov 16 07:59:01 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
some modifications to scaling in downunder. still not perfect.
Revision
4078 -
Directory Listing
Modified
Fri Nov 16 07:50:49 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Unit tests for binary install with no scons and no source tree.
Script for installing and testing a .deb within a chroot.
Revision
4077 -
Directory Listing
Modified
Fri Nov 16 04:31:02 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Minor change.
Revision
4076 -
Directory Listing
Modified
Thu Nov 15 03:45:24 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
def getDirectionalDerivative(self, m, d, grad_m):
Revision
4075 -
Directory Listing
Modified
Thu Nov 15 03:31:37 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
missing latex files
Revision
4074 -
Directory Listing
Modified
Thu Nov 15 03:30:59 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
this will break the downundermodule: major revision of the classes.
Revision
4073 -
Directory Listing
Modified
Thu Nov 15 03:28:33 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixing doco build error
Revision
4072 -
Directory Listing
Modified
Thu Nov 15 01:58:35 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fix to prevent escript from segfaulting on quantal
Revision
4071 -
Directory Listing
Modified
Tue Nov 13 21:43:11 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
small fix
Revision
4070 -
Directory Listing
Modified
Tue Nov 13 07:55:22 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
File for quantal. Now to work out why on earth quantal manages to make epydoc segfault
Revision
4069 -
Directory Listing
Modified
Tue Nov 13 07:47:16 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
ArithmeticTuple supports empty data object as components now.
Revision
4068 -
Directory Listing
Modified
Tue Nov 13 04:42:08 2012 UTC
(9 years, 6 months ago)
by
vboros
Original Path:
trunk
Small corrections to the magnetic forward model
Revision
4067 -
Directory Listing
Modified
Mon Nov 12 07:35:14 2012 UTC
(9 years, 6 months ago)
by
vboros
Original Path:
trunk
Magnetostatics background added
Revision
4066 -
Directory Listing
Modified
Mon Nov 12 06:18:47 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
renaming wheezyoptions file
Revision
4065 -
Directory Listing
Modified
Mon Nov 12 04:47:32 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Trying without uml
Revision
4064 -
Directory Listing
Modified
Fri Nov 9 07:25:14 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Tweaks
Revision
4063 -
Directory Listing
Modified
Fri Nov 9 06:15:00 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed a typo in method description.
Revision
4062 -
Directory Listing
Modified
Fri Nov 9 04:53:08 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Start of module reference section in inversion guide.
Revision
4061 -
Directory Listing
Modified
Fri Nov 9 04:05:28 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Updated data source test cases.
Revision
4060 -
Directory Listing
Modified
Fri Nov 9 03:50:19 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
-Overhaul of inversion data sources. Domain is now generated and managed by separate class.
-Removed UBCDataSource which was only used for testing.
-Updated example scripts.
Revision
4059 -
Directory Listing
Modified
Fri Nov 9 03:20:23 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Start of substitution for rules
Revision
4058 -
Directory Listing
Modified
Fri Nov 2 06:47:06 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
-Ripley now checks for input fs when calling gradient
-interactive mode works again when filename is supplied (typo)
-forward model PDE sets symmetry on now
Revision
4057 -
Directory Listing
Modified
Fri Nov 2 04:15:09 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
toc/hyperref fixes for inversion pdf.
Revision
4056 -
Directory Listing
Modified
Thu Nov 1 07:20:38 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Allow doxygen to build in another target
Debian build stuff begins
Revision
4055 -
Directory Listing
Modified
Thu Nov 1 00:22:01 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
Renaming of filenames
Revision
4054 -
Directory Listing
Modified
Wed Oct 31 23:27:57 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
prilimary checkin
Revision
4053 -
Directory Listing
Modified
Wed Oct 31 07:27:35 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Do not fix potential on sides of domain by default.
Revision
4052 -
Directory Listing
Modified
Wed Oct 31 05:50:35 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
missing references added (mantis id=683)
Revision
4051 -
Directory Listing
Modified
Wed Oct 31 03:40:47 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Split inversion cookbook into two parts...
Revision
4050 -
Directory Listing
Modified
Wed Oct 31 01:01:24 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Changed initial Hessian in magnetic test and removed some debug output.
Revision
4049 -
Directory Listing
Modified
Wed Oct 31 00:50:50 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed typos.
Revision
4048 -
Directory Listing
Modified
Tue Oct 30 21:54:15 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
fixed modification in the DataSource creator
Revision
4047 -
Directory Listing
Modified
Tue Oct 30 09:10:07 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
More on magnetic inversion
Revision
4046 -
Directory Listing
Modified
Tue Oct 30 04:43:25 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Deprecated saveDX and made sure DeprecationWarnings are shown (py2.7 disabled
those). Also a fix to $BUILD_DIR being non-absolute.
Revision
4045 -
Directory Listing
Modified
Tue Oct 30 03:57:22 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Imported inversion cookbook.
Revision
4044 -
Directory Listing
Modified
Tue Oct 30 03:35:17 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Some doco fixes for downunder.
Revision
4043 -
Directory Listing
Modified
Tue Oct 30 03:34:43 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Compile fixes for install guide.
Revision
4042 -
Directory Listing
Modified
Mon Oct 29 05:55:58 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
New SaveSilo tests (only run if Silo module available and MPI size=1).
Tests are somewhat limited due to missing functionality in Silo module (devs
contacted about that).
Revision
4041 -
Directory Listing
Modified
Sun Oct 28 23:42:35 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed a typo
Revision
4040 -
Directory Listing
Modified
Sun Oct 28 22:37:45 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Some py3 changes that didn't get committed for some reason
Revision
4039 -
Directory Listing
Modified
Fri Oct 26 07:34:06 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
magnetic inversion added
Revision
4038 -
Directory Listing
Modified
Fri Oct 26 04:47:25 2012 UTC
(9 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Minor fix to control file
Revision
4037 -
Directory Listing
Modified
Fri Oct 26 03:04:30 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
some modifictaions to make implementation for magnetic inversion easier
Revision
4036 -
Directory Listing
Modified
Thu Oct 25 06:21:03 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Added saveVTK tests for ripley domains.
Revision
4035 -
Directory Listing
Modified
Thu Oct 25 03:10:14 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Tweaked scons files so tests work even when specifying non-absolute build_dir.
Revision
4034 -
Directory Listing
Modified
Thu Oct 25 02:54:01 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixes to inversion. Using resetRightHandSideCoefficients() now.
Revision
4033 -
Directory Listing
Modified
Wed Oct 24 08:14:41 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
some typos fixed.
Revision
4032 -
Directory Listing
Modified
Wed Oct 24 08:06:15 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
Gravity inversion is disconnect from DataSource objects now in order to allow for more flexibility
when it comes to the definition of of Mapping and Regulariztion. GravityInversion does not hold a reference to the datasource object anymore.
use inv=GravityInversion()
inv.setUp(datasource)
rather than inv.setDataSource(datasource); inv.setUp()
Revision
4031 -
Directory Listing
Modified
Wed Oct 24 03:36:37 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Added option -x to run xterm to run-escript and replaced a few bashims.
Revision
4030 -
Directory Listing
Modified
Wed Oct 24 00:57:36 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Silenced the no-visit-in-path warning and fixed not-in-path run-escript in
utest.sh.
Revision
4029 -
Directory Listing
Modified
Wed Oct 24 00:29:15 2012 UTC
(9 years, 6 months ago)
by
caltinay
Original Path:
trunk
Reapplied changes from rev. 3853 which got lost in a merge...
Revision
4028 -
Directory Listing
Modified
Tue Oct 23 05:16:38 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
changes in pycad to address feature request 0000661
Revision
4027 -
Directory Listing
Modified
Tue Oct 23 04:56:33 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
setting a constant value to the initial solution of the Transport problem
had a problem. initial data object needs to be expanded before copied to the
paso transport object.
Revision
4026 -
Directory Listing
Modified
Tue Oct 23 03:12:50 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
missing file
Revision
4025 -
Directory Listing
Modified
Mon Oct 22 08:18:47 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
linearPDE.resetRightHandSideCoefficients has been implemented and tested.
Revision
4024 -
Directory Listing
Modified
Mon Oct 22 06:11:29 2012 UTC
(9 years, 6 months ago)
by
gross
Original Path:
trunk
tag testing for finley and dudley files added.
Revision
4023 -
Directory Listing
Modified
Tue Oct 16 04:17:48 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Another fix to the PDE assembly logic in ripley.
Revision
4022 -
Directory Listing
Modified
Mon Oct 15 23:52:24 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed checks in ripley::addPDEToRHS().
Revision
4021 -
Directory Listing
Modified
Mon Oct 15 02:31:00 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Doco fixes.
Unit test fix for sys.version_info type change
Revision
4020 -
Directory Listing
Modified
Thu Oct 11 22:27:33 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Removed print() that slipped in in last commit.
Revision
4019 -
Directory Listing
Modified
Thu Oct 11 08:12:55 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
More tabbing errors,
range/xrange
...
Revision
4018 -
Directory Listing
Modified
Thu Oct 11 04:43:39 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Used "new" raise syntax in a few places
Fixed some tabbing
Fixed some funnies involving changes to xrange/range
added a quick and nasty __hash__ function to Symbol
def __hash__(self):
return id(self)
This does mean that __hash__ and == do not match exactly. Not sure if that matters for our purposes
Revision
4017 -
Directory Listing
Modified
Thu Oct 11 03:13:28 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Modified a test so roundoff errors don't cause failures.
Revision
4016 -
Directory Listing
Modified
Tue Oct 9 03:50:27 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Skip data source tests under MPI for now as there is no straightforward way
of comparing the data (saveVTK appears to be the best option).
Revision
4015 -
Directory Listing
Modified
Mon Oct 8 01:19:04 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated savanna options file to use latest compiler, mkl
Revision
4014 -
Directory Listing
Modified
Thu Oct 4 03:28:35 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Changed data source to use ripley's netCDF reader,
added tests and changed ERMapper test to have different x and y sizes.
Revision
4013 -
Directory Listing
Modified
Thu Oct 4 03:13:27 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Implemented netCDF grid reader analogous to binary grid reader in ripley.
Revision
4012 -
Directory Listing
Modified
Wed Oct 3 02:25:10 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Initialize X_reduced in forward model to avoid issues later on.
Revision
4011 -
Directory Listing
Modified
Wed Oct 3 00:47:55 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated test reference file.
Revision
4010 -
Directory Listing
Modified
Tue Oct 2 06:57:11 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed a potential div by zero in ripley's automatic domain subdivider....
Revision
4009 -
Directory Listing
Modified
Tue Oct 2 05:53:37 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
don't try to flip y-coord in reader. some more fixes and doco.
Revision
4008 -
Directory Listing
Modified
Tue Oct 2 04:33:27 2012 UTC
(9 years, 7 months ago)
by
gross
Original Path:
trunk
point coordinates are now written in %.14e rather then %f. This fixes accuracy problems when it comes to geometrically small domains.
Revision
4007 -
Directory Listing
Modified
Tue Oct 2 02:12:01 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Doco updates.
Data source paddings now take x,y not xy,z as Z padding can be done by setting
vertical extents.
Revision
4006 -
Directory Listing
Modified
Fri Sep 28 06:16:46 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Update vm options to use pip-installed numpy.
Revision
4005 -
Directory Listing
Modified
Fri Sep 28 06:09:03 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
test fixes, doco updates, annoyance removals.
Revision
4004 -
Directory Listing
Modified
Fri Sep 28 04:45:25 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
don't use escript.escript.Data...
Revision
4003 -
Directory Listing
Modified
Fri Sep 28 00:20:01 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Load balancing on unit tests
Revision
4002 -
Directory Listing
Modified
Fri Sep 28 00:16:56 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed a memory leak (freeing paso coupler) in ripley.
Revision
4001 -
Directory Listing
Modified
Thu Sep 27 01:35:52 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Removed obsolete files.
Revision
4000 -
Directory Listing
Modified
Thu Sep 27 01:32:07 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
s/escript/escore/
Revision
3999 -
Directory Listing
Modified
Thu Sep 27 01:31:07 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Splitting tests
Revision
3998 -
Directory Listing
Modified
Thu Sep 27 01:17:28 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Finley now throws in ownSample() for reduced function with mpisize>1.
Revision
3997 -
Directory Listing
Modified
Thu Sep 27 01:09:12 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Add note to documentation that saveDataCSV will not work in all cases.
Revision
3996 -
Directory Listing
Modified
Thu Sep 27 00:54:10 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Don't test saveCSV for cases it does not work with.
Revision
3995 -
Directory Listing
Modified
Wed Sep 26 12:43:17 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
More module fiddles
Revision
3994 -
Directory Listing
Modified
Wed Sep 26 07:38:38 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Install doco still needs work.
Removing some of the weird:
esys.finley.finley
type modules
Revision
3993 -
Directory Listing
Modified
Wed Sep 26 07:00:55 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Addressing mantis 651. Test for finley will fail under MPI since there is
sth wrong with the way ReducedContinuousFunction samples are interrogated.
Revision
3992 -
Directory Listing
Modified
Wed Sep 26 02:50:48 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Data.cpp: Removed some namespace ambiguities which fixes doxygen warnings, some
cleanup and reindent.
*: doxygen fixes.
Revision
3991 -
Directory Listing
Modified
Tue Sep 25 23:52:22 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated doxygen cfg file and made a few first changes to doco.
Revision
3990 -
Directory Listing
Modified
Tue Sep 25 05:03:20 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
First set of assorted epydoc fixes/additions.
Revision
3989 -
Directory Listing
Modified
Tue Sep 25 02:21:54 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
More copyright fixes.
pyvisi traces removed.
Some install doco
Revision
3988 -
Directory Listing
Modified
Mon Sep 24 01:08:19 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Scale coordinates if pyproj is not available
Revision
3987 -
Directory Listing
Modified
Sun Sep 23 23:24:37 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fix to test which fails when ripley adjusts number of elements (domain decomp.)
Revision
3986 -
Directory Listing
Modified
Sun Sep 23 23:01:10 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Added explicit cast to make osx happy.
Revision
3985 -
Directory Listing
Modified
Fri Sep 21 06:44:17 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Unit test for ER Mapper reader.
Revision
3984 -
Directory Listing
Modified
Fri Sep 21 06:41:54 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
invert Y coordinate in ripley's 3d data reader. This needs to be configurable
and added to 2d as well...
Revision
3983 -
Directory Listing
Modified
Fri Sep 21 06:41:03 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Use ReducedFunction for data sources.
Revision
3982 -
Directory Listing
Modified
Fri Sep 21 03:23:22 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
More edits + removing pyvisi from trunk
Revision
3981 -
Directory Listing
Modified
Fri Sep 21 02:47:54 2012 UTC
(9 years, 7 months ago)
by
jfenwick
Original Path:
trunk
First pass of updating copyright notices
Revision
3980 -
Directory Listing
Modified
Fri Sep 21 01:55:39 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Now using NullCellValue to initialise data object for ERS reader.
Revision
3979 -
Directory Listing
Modified
Thu Sep 20 06:18:49 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed tests under MPI.
Revision
3978 -
Directory Listing
Modified
Thu Sep 20 04:36:17 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Make sympy optional as it was intended initially. Trying to instantiate anything
from symbolic will raise an exception if sympy is not available.
Revision
3977 -
Directory Listing
Modified
Thu Sep 20 04:27:10 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Export KMP_MONITOR_STACKSIZE so tests work on savanna.
Revision
3976 -
Directory Listing
Modified
Thu Sep 20 03:26:47 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
fixed python-2.7'ism.
Revision
3975 -
Directory Listing
Modified
Thu Sep 20 01:54:06 2012 UTC
(9 years, 7 months ago)
by
caltinay
Original Path:
trunk
Merged symbolic branch into trunk. Curious what daniel and spartacus have to
say...
Revision
3972 -
Directory Listing
Modified
Wed Sep 19 03:08:39 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Can now constrain sides of domain.
Revision
3971 -
Directory Listing
Modified
Wed Sep 19 02:55:35 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Implemented binary grid reader in ripley which is now used in ER Mapper source.
Interface/details likely to change but need to get this running now.
Revision
3970 -
Directory Listing
Modified
Wed Sep 19 02:28:27 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
More install doc fixes
Revision
3969 -
Directory Listing
Modified
Tue Sep 18 05:34:38 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Removing reference to nose
Revision
3968 -
Directory Listing
Modified
Mon Sep 17 06:30:02 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Starting updates to the install guide
Revision
3967 -
Directory Listing
Modified
Mon Sep 17 04:02:58 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Changes to SConstruct to allow building with clang
Revision
3966 -
Directory Listing
Modified
Mon Sep 17 00:45:39 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Changed unit scale for ER Mapper files. Fixed an issue with UBC source.
Revision
3965 -
Directory Listing
Modified
Fri Sep 14 01:23:17 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Data sources have to end up in the Function fs or we get into trouble when
interpolating. Now using setValueOfDataPoint() which doesn't seem to slow
things down too much.
Revision
3964 -
Directory Listing
Modified
Thu Sep 13 03:49:55 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Hopefully this will fix the interpolation in data sources.
Revision
3963 -
Directory Listing
Modified
Thu Sep 13 01:39:00 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fix to keep the warning-free-build happy
Revision
3962 -
Directory Listing
Modified
Tue Sep 11 09:12:07 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fix in brick for ambiguous typing.
Python work around for unit tests.
Passing cpp tests as well.
omp is disabled due to a weird linking error.
Revision
3961 -
Directory Listing
Modified
Tue Sep 11 07:21:41 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Options file for mole.
Work around for python compile errors
Revision
3960 -
Directory Listing
Modified
Mon Sep 10 01:39:40 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added accessors to fwd model, regularization and cost function plus access
to gravity survey data.
Revision
3959 -
Directory Listing
Modified
Fri Sep 7 04:48:07 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
support for geodetic coordinates in ER Mapper files. Correction to UTM
conversion (now assumes southern hemisphere).
Revision
3958 -
Directory Listing
Modified
Fri Sep 7 02:56:42 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixes to netcdf data source and new ERS (ER Mapper) datasource.
Revision
3957 -
Directory Listing
Modified
Wed Sep 5 23:49:23 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Do not require pyproj module-wide. Print a warning if it is not available but
needed instead of raising an exception.
Revision
3956 -
Directory Listing
Modified
Wed Sep 5 04:57:43 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixes to netcdf reader for inversions.
Revision
3955 -
Directory Listing
Modified
Tue Sep 4 01:44:41 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added CentOS 6 vm options file.
Revision
3954 -
Directory Listing
Modified
Tue Sep 4 01:43:58 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed an issue with incompatible nose.
Revision
3953 -
Directory Listing
Modified
Mon Sep 3 00:57:12 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Some test output adjustments.
Revision
3952 -
Directory Listing
Modified
Sun Sep 2 23:42:25 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Made a test slightly more relaxed since roundoff errors caused it to fail on
one system.
Revision
3951 -
Directory Listing
Modified
Tue Aug 28 23:58:08 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed tests with python versions <2.7.
Revision
3950 -
Directory Listing
Modified
Fri Aug 24 06:10:02 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
More tests and corrections in the alternative minimizers.
Revision
3949 -
Directory Listing
Modified
Fri Aug 24 02:37:47 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added tests for mappings.
Revision
3948 -
Directory Listing
Modified
Fri Aug 24 01:01:34 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Some interface changes to make the inversion more flexible.
Revision
3947 -
Directory Listing
Modified
Wed Aug 22 23:19:10 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Compiling and installing downunder module now. Adjusted import statements
accordingly. Added a gravity test run.
Revision
3946 -
Directory Listing
Modified
Wed Aug 22 02:08:12 2012 UTC
(9 years, 8 months ago)
by
caltinay
Original Path:
trunk
Initial import of inversion code from devteam area, rev. 51.
Nothing is scons built/installed/tested yet.
Revision
3945 -
Directory Listing
Modified
Tue Aug 21 04:11:13 2012 UTC
(9 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Changing utest behaviour for MPI
Revision
3944 -
Directory Listing
Modified
Mon Aug 20 02:11:22 2012 UTC
(9 years, 9 months ago)
by
caltinay
Original Path:
trunk
Fixed ordering of Hex's in weipa's ripley writer.
Fixed an issue with auto domain subdivisions in ripley Brick.
Revision
3943 -
Directory Listing
Modified
Thu Aug 9 04:43:24 2012 UTC
(9 years, 9 months ago)
by
caltinay
Original Path:
trunk
Added heuristics for number of domain subdivisions to ripley so ripley domains
can now be created without specifying the values manually (but a warning will
be printed).
Revision
3942 -
Directory Listing
Modified
Fri Jul 27 01:04:48 2012 UTC
(9 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Porting changes back from 3.3 release branch
Revision
3941 -
Directory Listing
Modified
Fri Jul 27 00:38:10 2012 UTC
(9 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Some more test disabling
Revision
3940 -
Directory Listing
Modified
Thu Jul 26 05:54:58 2012 UTC
(9 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Disabling tests which do not allow MPI
Previously we allowed these if there was only one rank
Revision
3939 -
Directory Listing
Modified
Mon Jul 23 01:50:46 2012 UTC
(9 years, 9 months ago)
by
caltinay
Original Path:
trunk
Added return value checks for freopen in mpi redirect code. Ubuntu has a
warn_unused_result attribute set for the function.
Re-indented the file while at it.
Revision
3934 -
Directory Listing
Modified
Fri Jul 13 09:01:16 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added unit test for tagreader
Revision
3931 -
Directory Listing
Modified
Tue Jul 10 00:39:09 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixing spelling
Revision
3928 -
Directory Listing
Modified
Mon Jul 9 23:23:43 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Do not allow attempts to setValue using a Locator which does not match the funcionSpace of the Data
Revision
3927 -
Directory Listing
Modified
Mon Jul 9 11:11:47 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Avoid warning
Revision
3923 -
Directory Listing
Modified
Mon Jul 9 05:12:12 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixing build error.
Revision
3922 -
Directory Listing
Modified
Mon Jul 9 02:19:51 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Adds setvalue to locator
Addresses mantis #531
Revision
3921 -
Directory Listing
Modified
Thu Jul 5 05:02:49 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fix build error
Revision
3920 -
Directory Listing
Modified
Thu Jul 5 03:42:30 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Copied over tagname reading stuff from finley
Revision
3919 -
Directory Listing
Modified
Thu Jul 5 03:12:02 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Don't know what caused this to show as an error.
Compiler update perhaps?
Revision
3918 -
Directory Listing
Modified
Thu Jul 5 02:44:07 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added unit test which uses the TestDomain to check reduction.
TestDomains can no longer be created directly from python
(fixes problem I had earlier)
TestDomain can now create testdomains with aribtrarily sized
coordinate vectors.
Revision
3917 -
Directory Listing
Modified
Thu Jul 5 00:17:50 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixing a bug in lazy reduction operations.
Will add extra test to prevent regression once I can find out why the test is crashing
Revision
3916 -
Directory Listing
Modified
Wed Jul 4 06:16:52 2012 UTC
(9 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Deal correctly with scalars passed into inplace update operators.
Fixes mantis 669
Revision
3915 -
Directory Listing
Modified
Mon Jun 25 02:17:58 2012 UTC
(9 years, 10 months ago)
by
caltinay
Original Path:
trunk
Added declspecs for all ripley classes.
Revision
3914 -
Directory Listing
Modified
Wed Jun 20 04:51:47 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Only allow setX from ContinuousFunctions.
This addresses mantis 644.
Revision
3913 -
Directory Listing
Modified
Tue Jun 19 06:21:58 2012 UTC
(9 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fixed misuse of getSampleDataRO with lazy data in ripley.
Revision
3912 -
Directory Listing
Modified
Fri Jun 15 05:02:42 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
GetMeshFromFile wrapper to load .fly or .msh depending on the extension.
Note that this only works on one of the two formats named .msh
Addresses mantis issue 641.
Revision
3911 -
Directory Listing
Modified
Thu Jun 14 01:01:03 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Copyright changes
Revision
3910 -
Directory Listing
Modified
Thu Jun 14 00:45:03 2012 UTC
(9 years, 11 months ago)
by
gross
Original Path:
trunk
Small bug fixed.
Revision
3909 -
Directory Listing
Modified
Wed Jun 13 07:03:06 2012 UTC
(9 years, 11 months ago)
by
gross
Original Path:
trunk
darcy solver removes hydrostatic pressure from problem now
Revision
3908 -
Directory Listing
Modified
Wed Jun 13 05:43:45 2012 UTC
(9 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fixed an error in ripley computing shared node id's.
pythonMPIredirect now redirects again.
Revision
3907 -
Directory Listing
Modified
Fri Jun 8 01:20:09 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Only switch on useElementsOnFace by default where we actually support it
Revision
3906 -
Directory Listing
Modified
Thu Jun 7 11:00:50 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Disable AMG on MPI builds
Revision
3905 -
Directory Listing
Modified
Tue Jun 5 08:33:41 2012 UTC
(9 years, 11 months ago)
by
gross
Original Path:
trunk
length scale changed
Revision
3904 -
Directory Listing
Modified
Tue Jun 5 08:30:24 2012 UTC
(9 years, 11 months ago)
by
gross
Original Path:
trunk
incorrect macro element argument removed
Revision
3903 -
Directory Listing
Modified
Tue Jun 5 08:26:20 2012 UTC
(9 years, 11 months ago)
by
gross
Original Path:
trunk
offset removed: not clear why this was there
Revision
3901 -
Directory Listing
Modified
Wed May 23 08:09:45 2012 UTC
(9 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Rectangle and Brick use rich face element by default.
This is to address issue #653
Updated unit tests to explicitly not use them where they didn't
specify previoulsy
Revision
3897 -
Directory Listing
Modified
Wed May 16 03:17:26 2012 UTC
(10 years ago)
by
jfenwick
Original Path:
trunk
correcting example
Revision
3896 -
Directory Listing
Modified
Fri May 11 01:31:29 2012 UTC
(10 years ago)
by
caltinay
Original Path:
trunk
Re-enable numpy header detection with python 2.
Revision
3895 -
Directory Listing
Modified
Mon Apr 16 00:09:42 2012 UTC
(10 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Adding some files which went missing in the merge
Revision
3894 -
Directory Listing
Modified
Wed Apr 11 03:13:15 2012 UTC
(10 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Still need to add notes to the install guide about Python3.
Revision
3893 -
Directory Listing
Modified
Wed Apr 11 01:40:10 2012 UTC
(10 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Pycad now generates scripts with floating points at 6 decimal places.
Tests have been ammended to match this.
Revision
3892 -
Directory Listing
Modified
Tue Apr 10 08:57:23 2012 UTC
(10 years, 1 month ago)
by
jfenwick
Original Path:
trunk
Merged changes across from the attempt2 branch.
This version builds and passes python2 tests.
It also passes most python3 tests.
Revision
3887 -
Directory Listing
Modified
Thu Apr 5 03:14:59 2012 UTC
(10 years, 1 month ago)
by
gross
Original Path:
trunk
low level system in AMG is created one only now.
Revision
3886 -
Directory Listing
Modified
Thu Apr 5 00:50:30 2012 UTC
(10 years, 1 month ago)
by
gross
Original Path:
trunk
some minor problems with MPI AMG fixed.
Revision
3885 -
Directory Listing
Modified
Wed Apr 4 22:12:26 2012 UTC
(10 years, 1 month ago)
by
gross
Original Path:
trunk
some fix in AMG
Revision
3884 -
Directory Listing
Modified
Wed Apr 4 04:55:43 2012 UTC
(10 years, 1 month ago)
by
gross
Original Path:
trunk
some fix in AMG
Revision
3883 -
Directory Listing
Modified
Mon Mar 26 03:24:14 2012 UTC
(10 years, 1 month ago)
by
caltinay
Original Path:
trunk
Modified dlopenflags in escript's init module so newer MKL libraries can
successfully load support libraries.
Revision
3882 -
Directory Listing
Modified
Thu Mar 22 02:15:57 2012 UTC
(10 years, 1 month ago)
by
caltinay
Original Path:
trunk
Added another constraint for the numpy optimized array access: endianness.
The scipy netcdf reader gave me big endian data which resulted in garbage.
Can use the astype() method in python to convert.
Revision
3867 -
Directory Listing
Modified
Thu Mar 15 05:45:54 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
weipa treats shapes (1,) and (1,1) as scalars. Fixes bogus output in VTK writer.
Revision
3866 -
Directory Listing
Modified
Wed Mar 14 02:06:13 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Use system silo on guineapig now.
Revision
3865 -
Directory Listing
Modified
Mon Mar 12 23:49:05 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Re-enabled threaded MKL on epic.
Revision
3863 -
Directory Listing
Modified
Mon Mar 12 00:15:40 2012 UTC
(10 years, 2 months ago)
by
gross
Original Path:
trunk
some debug prints removed
Revision
3861 -
Directory Listing
Modified
Fri Mar 9 02:06:29 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Added options file that disables openMP and replaces the MKL library for savanna.
Revision
3853 -
Directory Listing
Modified
Thu Mar 1 07:25:03 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Fixed hybrid mode when using OpenMPI by adding --cpus-per-rank argument to
mpirun in the launcher. Updated epic options file accordingly.
Revision
3852 -
Directory Listing
Modified
Thu Mar 1 05:34:52 2012 UTC
(10 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Correcting some indent errors
Revision
3851 -
Directory Listing
Modified
Wed Feb 29 05:23:30 2012 UTC
(10 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Start of cross-compile build for py3
Revision
3850 -
Directory Listing
Modified
Tue Feb 28 06:04:42 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Support for CSC in ripley.
Revision
3843 -
Directory Listing
Modified
Mon Feb 27 05:50:58 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Updated epic options, disabled OpenMP until problems solved.
Revision
3842 -
Directory Listing
Modified
Mon Feb 27 04:19:16 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Updated savanna libraries and compiler version.
Revision
3841 -
Directory Listing
Modified
Mon Feb 27 04:18:53 2012 UTC
(10 years, 2 months ago)
by
caltinay
Original Path:
trunk
Added support for OFFSET1 matrices in ripley.
Revision
3837 -
Directory Listing
Modified
Thu Feb 16 03:58:58 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Test cleanup.
Revision
3836 -
Directory Listing
Modified
Thu Feb 16 03:17:18 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Transport problem support for ripley.
Revision
3835 -
Directory Listing
Modified
Wed Feb 15 23:19:01 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
and another attempt to fix MPI compilation
Revision
3834 -
Directory Listing
Modified
Wed Feb 15 07:09:09 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
some declaration problems fixed
Revision
3833 -
Directory Listing
Modified
Wed Feb 15 06:19:45 2012 UTC
(10 years, 3 months ago)
by
lgao
Original Path:
trunk
Fix the merging problem for this file.
Revision
3830 -
Directory Listing
Modified
Wed Feb 15 04:27:47 2012 UTC
(10 years, 3 months ago)
by
lgao
Original Path:
trunk
Add comments for Smoother
Revision
3829 -
Directory Listing
Modified
Wed Feb 15 03:33:08 2012 UTC
(10 years, 3 months ago)
by
lgao
Original Path:
trunk
Fix warnings from another machine.
Revision
3828 -
Directory Listing
Modified
Wed Feb 15 03:27:58 2012 UTC
(10 years, 3 months ago)
by
lgao
Original Path:
trunk
Fix all warnings reported on guineapig.
Revision
3827 -
Directory Listing
Modified
Tue Feb 14 11:42:08 2012 UTC
(10 years, 3 months ago)
by
lgao
Original Path:
trunk
Merge branch "amg_from_3530" back into trunk.
Revision
3825 -
Directory Listing
Modified
Tue Feb 14 06:11:58 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
don't call MPI withing parallel regions
Revision
3824 -
Directory Listing
Modified
Tue Feb 14 01:22:16 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
fix for openmp
Revision
3823 -
Directory Listing
Modified
Mon Feb 13 08:09:32 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
some fixes for openmp/mpi compilation and linearNC can now handel constraints.
Revision
3822 -
Directory Listing
Modified
Mon Feb 13 06:22:06 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
Transport solver supports now constraints (except the linear CN)
Revision
3816 -
Directory Listing
Modified
Thu Feb 9 05:46:36 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
WrappedArray now honours the 'strides' field in the numpy array interface
and supports more data types. Fixes test failures on savanna which for some
reason did not surface on other machines.
Revision
3814 -
Directory Listing
Modified
Thu Feb 9 00:11:08 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Changes to savanna options file to use intel 12 and numpy 1.6.1.
Revision
3808 -
Directory Listing
Modified
Mon Feb 6 06:17:47 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
some modifications to the test examples
Revision
3807 -
Directory Listing
Modified
Mon Feb 6 06:14:25 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
LINEAR_CRANK_NICOLSON solver added
Revision
3806 -
Directory Listing
Modified
Mon Feb 6 02:32:48 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
ripley::getSize() also returns circumcircle now.
Revision
3805 -
Directory Listing
Modified
Mon Feb 6 01:42:20 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
return circumcircle now.
Revision
3804 -
Directory Listing
Modified
Mon Feb 6 00:48:22 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed utest.sh generator so tests can be run if the installation prefix is
not `pwd`
Revision
3803 -
Directory Listing
Modified
Fri Feb 3 06:16:30 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixes to ripley unit test setup
Revision
3802 -
Directory Listing
Modified
Fri Feb 3 06:05:57 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Quick fix for potential invalid memory access in paso.
Revision
3801 -
Directory Listing
Modified
Fri Feb 3 05:21:02 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed OpenMP bug in paso local AMG.
Revision
3800 -
Directory Listing
Modified
Fri Feb 3 01:18:06 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed integration with constant data on ripley.
Revision
3799 -
Directory Listing
Modified
Thu Feb 2 10:41:28 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
test for gradient of constant data added
Revision
3798 -
Directory Listing
Modified
Thu Feb 2 09:47:27 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
test for interpolation of constant data added
Revision
3797 -
Directory Listing
Modified
Thu Feb 2 09:28:59 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
test for integration of constant data added.
Revision
3796 -
Directory Listing
Modified
Thu Feb 2 06:26:15 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
typo in grad calculation fixed.
Revision
3795 -
Directory Listing
Modified
Thu Feb 2 05:54:34 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Had to remove 'nowait' directive from PDE boundary conditions since all
4 (2D) / 8 (3D) values are updated the way it is implemented. This caused
race conditions when updating RHS.
Revision
3794 -
Directory Listing
Modified
Wed Feb 1 23:02:26 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
uninitialied variable fixed.
Revision
3793 -
Directory Listing
Modified
Wed Feb 1 07:39:43 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
new implementation of FCT solver with some modifications to the python interface
Revision
3792 -
Directory Listing
Modified
Wed Feb 1 06:16:25 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Merged ripley rectangular domain into trunk.
Revision
3788 -
Directory Listing
Modified
Mon Jan 30 04:41:33 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed showEscriptParams() which hasn't worked for 2 years or so.
Revision
3787 -
Directory Listing
Modified
Fri Jan 27 01:43:47 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Changed test cases from y.interpolateTable(...x...) to x.interpolateTable(...y...)
Revision
3786 -
Directory Listing
Modified
Wed Jan 25 04:46:39 2012 UTC
(10 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Made 2D interpolation call consistant with 1D and 3D.
Doco updates later
Revision
3784 -
Directory Listing
Modified
Wed Jan 25 01:31:42 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Implemented optimized copy from numpy in WrappedArray (#652).
Revision
3782 -
Directory Listing
Modified
Tue Jan 24 01:30:38 2012 UTC
(10 years, 3 months ago)
by
caltinay
Original Path:
trunk
Another attempt to fix #649
Revision
3778 -
Directory Listing
Modified
Fri Jan 20 05:09:52 2012 UTC
(10 years, 3 months ago)
by
gross
Original Path:
trunk
better error reporting from UMFPACK
Revision
3775 -
Directory Listing
Modified
Wed Jan 18 07:26:34 2012 UTC
(10 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Weipa updated
Revision
3774 -
Directory Listing
Modified
Wed Jan 18 06:29:34 2012 UTC
(10 years, 4 months ago)
by
jfenwick
Original Path:
trunk
dudley, pasowrap, pycad
Revision
3772 -
Directory Listing
Modified
Wed Jan 18 04:19:33 2012 UTC
(10 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Converting finley directories
Revision
3771 -
Directory Listing
Modified
Wed Jan 18 02:30:48 2012 UTC
(10 years, 4 months ago)
by
jfenwick
Original Path:
trunk
First stage of 2.6/3 conversion
Revision
3747 -
Directory Listing
Modified
Thu Dec 15 02:13:14 2011 UTC
(10 years, 5 months ago)
by
gross
Original Path:
trunk
inconsistent notation fixed.
Revision
3739 -
Directory Listing
Modified
Tue Dec 13 00:48:26 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
Ok, the python wrappers do use esysUtils for the exception translator.
Anything else?
Revision
3738 -
Directory Listing
Modified
Tue Dec 13 00:37:55 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
Windoze: Fixed warning and linker error
Don't look for non-existing pasowrap tests.
Revision
3737 -
Directory Listing
Modified
Tue Dec 13 00:04:39 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
Reordered and removed superfluous libraries from link lines. Hope W32 likes
that.
Revision
3736 -
Directory Listing
Modified
Mon Dec 12 01:26:51 2011 UTC
(10 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixed apparent multiple instances of Esys
Revision
3734 -
Directory Listing
Modified
Fri Dec 9 04:48:08 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
pycad kept creating temporary files. This should hopefully fix it.
Revision
3729 -
Directory Listing
Modified
Thu Dec 8 06:46:49 2011 UTC
(10 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixed mistake in Finley_Assemble_PDE and the dudley equivalent.
Cihan - you might want to look to see if Ripley is affected
Revision
3728 -
Directory Listing
Modified
Thu Dec 8 05:11:19 2011 UTC
(10 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Oops
Revision
3727 -
Directory Listing
Modified
Thu Dec 8 04:55:56 2011 UTC
(10 years, 5 months ago)
by
jfenwick
Original Path:
trunk
More broken linkage
Revision
3726 -
Directory Listing
Modified
Thu Dec 8 04:35:52 2011 UTC
(10 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fixing some broken linkage on windows
Revision
3723 -
Directory Listing
Modified
Wed Dec 7 05:59:04 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
Don't eat exceptions when using MPI with one rank.
Revision
3720 -
Directory Listing
Modified
Wed Dec 7 04:32:21 2011 UTC
(10 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed off-by-one error in FunctionSpace
Revision
3689 -
Directory Listing
Modified
Wed Nov 23 01:39:45 2011 UTC
(10 years, 5 months ago)
by
gross
Original Path:
trunk
integration nodes fixed
Revision
3681 -
Directory Listing
Modified
Fri Nov 18 04:54:15 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Moved implementation of getTransportTypeId() and getSystemMatrixTypeId() into
pasowrap.
Revision
3678 -
Directory Listing
Modified
Thu Nov 17 06:32:05 2011 UTC
(10 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Reversing other changes which made it in somehow
Revision
3677 -
Directory Listing
Modified
Thu Nov 17 04:01:12 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed order of libraries which makes static esysUtils work again.
Revision
3676 -
Directory Listing
Modified
Thu Nov 17 03:52:25 2011 UTC
(10 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Removed some debug text
Corrected some dudley where they should not have been.
Set savanna to build shared for now
Revision
3675 -
Directory Listing
Modified
Thu Nov 17 00:53:38 2011 UTC
(10 years, 6 months ago)
by
jfenwick
Original Path:
trunk
pasowrap joins the trunk.
Revision
3667 -
Directory Listing
Modified
Tue Nov 15 23:29:23 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
better consistence of script and notation
Revision
3650 -
Directory Listing
Modified
Fri Nov 4 07:02:55 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
ode solver added
Revision
3649 -
Directory Listing
Modified
Fri Nov 4 04:35:15 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
gmsh reader understand name tags now.
Revision
3648 -
Directory Listing
Modified
Thu Nov 3 08:13:31 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
typos fixed
Revision
3647 -
Directory Listing
Modified
Tue Nov 1 23:33:18 2011 UTC
(10 years, 6 months ago)
by
lgao
Original Path:
trunk
With this option file, unit tests finished successfully with the following order to load module:
module load mpi/gcc/openmpi/1.4.3
module load python/2.6.7
module load boost/1.46.1-python-2.6
module load netcdf/4.0.1
module load scons/2.0.1-python-2.6
module load intel-compilers/11.1.075
module load intel-mkl/10.3.5.220
module load python-numpy/1.3.0-python-2.6
module load cppunit/1.12.1
module load python-matplotlib/0.98.5.3-python-2.6
module load hdf5/1.8.6
module load silo/4.7.2
module load hypre/2.0.0
HYPRE is loaded but not used yet since the installed hypre module on epic comes with static library only.
Revision
3646 -
Directory Listing
Modified
Fri Oct 28 05:20:38 2011 UTC
(10 years, 6 months ago)
by
lgao
Original Path:
trunk
working option file on epic
Revision
3645 -
Directory Listing
Modified
Fri Oct 28 00:11:30 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed typos.
Revision
3644 -
Directory Listing
Modified
Thu Oct 27 06:42:56 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
hint to add surface items in pycad
Revision
3643 -
Directory Listing
Modified
Thu Oct 27 06:23:16 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Updated savanna options file. We're now using silo 4.8, netcdf 4.1.1 and boost 1.42 on savanna.
Revision
3642 -
Directory Listing
Modified
Thu Oct 27 03:41:51 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Assorted spelling/comment fixes in paso.
Revision
3641 -
Directory Listing
Modified
Thu Oct 27 02:16:12 2011 UTC
(10 years, 6 months ago)
by
gross
Original Path:
trunk
more work on the assemblage
Revision
3639 -
Directory Listing
Modified
Tue Oct 25 02:13:26 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Assorted spelling fixes in finley C.
Revision
3637 -
Directory Listing
Modified
Fri Oct 21 04:29:33 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed memory leaks in loadMesh() for dudley and finley.
Revision
3635 -
Directory Listing
Modified
Fri Oct 21 00:26:01 2011 UTC
(10 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed minor issues.
Revision
3630 -
Directory Listing
Modified
Wed Oct 19 03:04:53 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
minor fix to dary flux
Revision
3629 -
Directory Listing
Modified
Wed Oct 19 03:04:27 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
darcy example added
Revision
3628 -
Directory Listing
Modified
Wed Oct 19 02:09:36 2011 UTC
(10 years, 7 months ago)
by
caltinay
Original Path:
trunk
Prepend our libraries instead of appending. This should fix HYPRE link
issue on epic.
Revision
3627 -
Directory Listing
Modified
Fri Oct 14 13:54:49 2011 UTC
(10 years, 7 months ago)
by
caltinay
Original Path:
trunk
Reverted some changes that slipped in and caused the Silo writer to not behave.
Revision
3626 -
Directory Listing
Modified
Fri Oct 14 02:34:55 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
Silo and cppunit added for epic (there is still a problem with hypre)
Revision
3625 -
Directory Listing
Modified
Thu Oct 13 01:54:27 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
missing argument in gmsh reader documentation added
Revision
3624 -
Directory Listing
Modified
Wed Oct 12 07:58:25 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
changes for epic.ivec.org
Revision
3623 -
Directory Listing
Modified
Tue Oct 11 03:59:40 2011 UTC
(10 years, 7 months ago)
by
caltinay
Original Path:
trunk
Added option to enable/disable saving of mesh data in weipa.
Now defaults to false since it's mainly for debugging.
Fixes #640.
Revision
3622 -
Directory Listing
Modified
Thu Oct 6 08:06:41 2011 UTC
(10 years, 7 months ago)
by
trankine
Original Path:
trunk
Epic.ivec.org scons build template
Revision
3620 -
Directory Listing
Modified
Wed Oct 5 06:06:14 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
bug fixed
Revision
3619 -
Directory Listing
Modified
Wed Oct 5 03:53:34 2011 UTC
(10 years, 7 months ago)
by
gross
Original Path:
trunk
some rescaling of permeability in the darcy solver added
Revision
3618 -
Directory Listing
Modified
Fri Sep 30 04:07:09 2011 UTC
(10 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Allowed 'no' as an mpi type.
Allowed SVN_VERSION to be specified from the command line.
TO BE USED ONLY FOR RELEASE PURPOSES where you do not have a .svn checkout
Revision
3616 -
Directory Listing
Modified
Fri Sep 30 00:56:37 2011 UTC
(10 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Center a table that I noticed and use upquote package to stop LaTeX from
mucking about with ' in python code.
Fixes #632
Revision
3607 -
Directory Listing
Modified
Mon Sep 19 22:08:24 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed double/float warning.
Revision
3606 -
Directory Listing
Modified
Mon Sep 19 16:26:51 2011 UTC
(10 years, 8 months ago)
by
trankine
Original Path:
trunk
Trial nosetests runner tests for better integration
Revision
3605 -
Directory Listing
Modified
Mon Sep 19 07:47:23 2011 UTC
(10 years, 8 months ago)
by
trankine
Original Path:
trunk
cppunit actually does do the install step in the msvc project files and does put the build products where scons can find them.
Revision
3604 -
Directory Listing
Modified
Mon Sep 19 04:47:53 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Changed detection of pdflatex since some versions of scons require .ltx or
.latex file extensions when pdflatex is not available.
Also added cleanup of utest.sh and buildvars file.
Revision
3603 -
Directory Listing
Modified
Mon Sep 19 03:42:53 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed some unused var errors in non-mpi build.
Revision
3602 -
Directory Listing
Modified
Mon Sep 19 02:38:11 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fix scons checks on windows
Revision
3601 -
Directory Listing
Modified
Mon Sep 19 01:21:33 2011 UTC
(10 years, 8 months ago)
by
trankine
Original Path:
trunk
Updating cgisrv3 options for external cppunit - because I cant see brackets.
Revision
3600 -
Directory Listing
Modified
Mon Sep 19 00:58:15 2011 UTC
(10 years, 8 months ago)
by
trankine
Original Path:
trunk
Updating cgisrv3 options for external cppunit
Revision
3599 -
Directory Listing
Modified
Fri Sep 16 01:34:46 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Updated install guide to mention external CppUnit dependency for unit tests.
Revision
3598 -
Directory Listing
Modified
Fri Sep 16 01:01:17 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
New config option build_shared (which replaces share_paso & share_esysUtils).
Also enabled building escriptreader library on Windows which should now
work in both shared and static mode.
Revision
3597 -
Directory Listing
Modified
Thu Sep 15 06:03:17 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Switching to external cppunit:
-removed tools/CppUnitTest
-updated scons script and files
-updated tests to changed API
-updated readme
Bumped scons options file version to 201. Additions:
-cppunit*
-boomeramg*
-vsl_random
Revision
3596 -
Directory Listing
Modified
Thu Sep 15 05:58:15 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Deleted some obsolete options files.
Revision
3595 -
Directory Listing
Modified
Thu Sep 15 05:56:47 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Skip some more gmsh-dependend tests if gmsh is not available.
Revision
3594 -
Directory Listing
Modified
Thu Sep 15 00:45:04 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added missing declspecs in paso. Thanks Terry.
Revision
3589 -
Directory Listing
Modified
Mon Sep 12 03:25:25 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
This fixes the bug 616. Problem was that the Coupler used the pattern of original rather than unrolled pattern.
Revision
3588 -
Directory Listing
Modified
Mon Sep 12 01:53:17 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
Typo fixed.
Revision
3586 -
Directory Listing
Modified
Fri Sep 9 04:02:29 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
run_domainreaders now passes some parameters to the constructors so
kwargs is tested to be working. Addresses #578.
Revision
3585 -
Directory Listing
Modified
Wed Sep 7 06:16:08 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fix for #582: Determine if gmsh was compiled with MPI support and use
MPI_Comm_spawn to invoke it if necessary.
Revision
3584 -
Directory Listing
Modified
Tue Sep 6 11:08:34 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Removing Locator.setValue for now
Revision
3583 -
Directory Listing
Modified
Tue Sep 6 04:27:59 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Updated shake75 options file.
Revision
3582 -
Directory Listing
Modified
Tue Sep 6 02:02:17 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
some clarification of the documentation on the Stokes solver.
Revision
3581 -
Directory Listing
Modified
Tue Sep 6 00:52:58 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
Used python 2.7 syntax. Sorry!
Revision
3580 -
Directory Listing
Modified
Tue Sep 6 00:31:35 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
error handeling for python compilation improved.
Revision
3579 -
Directory Listing
Modified
Mon Sep 5 23:25:01 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Stopping unit test from failing until I can get it working
Revision
3578 -
Directory Listing
Modified
Mon Sep 5 23:18:45 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
Missing dependence added (?) and typo in test files fixed.
Revision
3577 -
Directory Listing
Modified
Mon Sep 5 08:22:52 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
getFLux fixed and tests added.
Revision
3576 -
Directory Listing
Modified
Mon Sep 5 06:33:20 2011 UTC
(10 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed two more instances of macro-dependent unused vars.
Revision
3575 -
Directory Listing
Modified
Fri Sep 2 08:31:08 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixing bug I introduced with the last commit
Revision
3574 -
Directory Listing
Modified
Fri Sep 2 07:19:31 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Added setValue to locator.
Some unit tests added but they aren't being triggered for some reason
Revision
3573 -
Directory Listing
Modified
Fri Sep 2 05:51:02 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Added more comprehensible doco about 3D interpolation.
Also fixed a bug but this may break code which previously used 3D interpolation.
This fixes mantis #581
Revision
3572 -
Directory Listing
Modified
Thu Sep 1 07:54:42 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Comment out a non-existant function from the Finley interface and (hopefully)
fix mantis bug #623
Revision
3571 -
Directory Listing
Modified
Thu Sep 1 03:53:23 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
LinearSolver option RILU has been removed from the documentation it is not supported yet.
Revision
3570 -
Directory Listing
Modified
Thu Sep 1 03:11:26 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed some bib entries, changed visit script in guide to use " instead of '.
Reworded a sentence.
Revision
3569 -
Directory Listing
Modified
Thu Sep 1 02:42:36 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
Darcy flow solver and docu reviewed. Coupled solvers have been removed.
Revision
3568 -
Directory Listing
Modified
Tue Aug 30 08:23:24 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
darcy flux documentation updated.
Revision
3567 -
Directory Listing
Modified
Tue Aug 30 07:55:02 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
FIXME and TODO fixed.
Revision
3566 -
Directory Listing
Modified
Tue Aug 30 07:37:55 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
small fix to units
Revision
3565 -
Directory Listing
Modified
Mon Aug 29 10:28:57 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
surely it will accept this one
Revision
3564 -
Directory Listing
Modified
Mon Aug 29 09:09:30 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
In case windows is case sensitive
Revision
3563 -
Directory Listing
Modified
Mon Aug 29 04:26:46 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Another try to fix the windows issue
Revision
3562 -
Directory Listing
Modified
Mon Aug 29 03:31:13 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Removed DLL export from non-exported methods
Revision
3561 -
Directory Listing
Modified
Mon Aug 29 02:51:05 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Attempt to fix windows problem
Revision
3560 -
Directory Listing
Modified
Mon Aug 29 01:10:42 2011 UTC
(10 years, 8 months ago)
by
gross
Original Path:
trunk
lf missing in buildvars print
Revision
3559 -
Directory Listing
Modified
Fri Aug 26 07:47:27 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Silence some warnings unused var warnings under gcc.
Revision
3558 -
Directory Listing
Modified
Fri Aug 26 06:09:02 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Merged changes from dirac.
Now the only way to add diracPoints is to use the constructor
Revision
3552 -
Directory Listing
Modified
Mon Aug 22 00:05:17 2011 UTC
(10 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed icc problem
Revision
3551 -
Directory Listing
Modified
Fri Aug 19 03:53:41 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Changing unit test calls to use non deprecated forms (python2.7)
fixes bug #568
Revision
3550 -
Directory Listing
Modified
Fri Aug 19 01:51:35 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Switching from rand() to boost::random for non-VSL randoms
Revision
3549 -
Directory Listing
Modified
Tue Aug 9 06:40:06 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fix for issue #617
A couple of extra tests to make sure it doesn't happen again
Revision
3548 -
Directory Listing
Modified
Tue Aug 9 04:00:27 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fixing badger options
Revision
3547 -
Directory Listing
Modified
Tue Aug 2 04:24:09 2011 UTC
(10 years, 9 months ago)
by
lgao
Original Path:
trunk
Set "lapack" to "mkl" before the mantis bug 0000616 is solved.
Revision
3546 -
Directory Listing
Modified
Thu Jul 28 01:32:20 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Replaced 'and' with && since windows doesn't seem to understand it
Revision
3545 -
Directory Listing
Modified
Wed Jul 27 06:29:09 2011 UTC
(10 years, 9 months ago)
by
lgao
Original Path:
trunk
Turn off VSL for random data before the MKL library link line problem has been solved.
Revision
3544 -
Directory Listing
Modified
Wed Jul 27 06:19:10 2011 UTC
(10 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Temporary fix to get windows to compile
Revision
3543 -
Directory Listing
Modified
Fri Jul 22 06:58:03 2011 UTC
(10 years, 9 months ago)
by
gross
Original Path:
trunk
and the generator script
Revision
3542 -
Directory Listing
Modified
Fri Jul 22 06:57:41 2011 UTC
(10 years, 9 months ago)
by
gross
Original Path:
trunk
first attempts toward a multi grid solver
Revision
3541 -
Directory Listing
Modified
Fri Jul 22 03:21:06 2011 UTC
(10 years, 9 months ago)
by
trankine
Original Path:
trunk
migration to system maintained dependancies (not per build). will allow multi builders
Revision
3538 -
Directory Listing
Modified
Mon Jul 4 00:13:02 2011 UTC
(10 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added paper with current dev team to the references section.
Revision
3529 -
Directory Listing
Modified
Thu May 26 00:36:10 2011 UTC
(10 years, 11 months ago)
by
caltinay
Original Path:
trunk
Re-enable VisIt and Silo on savanna and use gcc-4.6 on shake75.
Revision
3527 -
Directory Listing
Modified
Tue May 24 06:59:20 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
modifications to the coal seam gas
Revision
3526 -
Directory Listing
Modified
Tue May 24 05:01:46 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
coal code uses nodal wells now
Revision
3525 -
Directory Listing
Modified
Tue May 24 04:04:58 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
and more typos fixed.
Revision
3524 -
Directory Listing
Modified
Tue May 24 02:23:00 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
typo fixed.
Revision
3523 -
Directory Listing
Modified
Tue May 24 02:03:37 2011 UTC
(10 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fixed declaration order (register const) for gcc-4.6
Revision
3522 -
Directory Listing
Modified
Tue May 24 00:57:58 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
(almost) full support for Point elements
Revision
3521 -
Directory Listing
Modified
Mon May 23 07:23:02 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
3520 -
Directory Listing
Modified
Mon May 23 06:24:30 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
some fixes for to point interpolation
Revision
3519 -
Directory Listing
Modified
Mon May 23 05:55:47 2011 UTC
(10 years, 11 months ago)
by
gross
Original Path:
trunk
compiler fixes
Revision
3515 -
Directory Listing
Modified
Thu May 19 08:20:57 2011 UTC
(11 years ago)
by
gross
Original Path:
trunk
some first work for DiracFunctions
Revision
3514 -
Directory Listing
Modified
Thu May 19 04:48:34 2011 UTC
(11 years ago)
by
caltinay
Original Path:
trunk
Fixed __truediv__ and added __rtruediv__ for new python division operator.
Revision
3513 -
Directory Listing
Modified
Thu May 19 04:45:19 2011 UTC
(11 years ago)
by
lgao
Original Path:
trunk
When "werror" is set to True, scons build will complains about compilation failure of some boost "multi-array" test case. This causes recently unit-tests failures. So I set "werror" back to False before someone who has the knowledge fixes the problem.
Revision
3511 -
Directory Listing
Modified
Tue May 17 23:56:13 2011 UTC
(11 years ago)
by
lgao
Original Path:
trunk
Fixed the scons build problem in case MPI is not in use (this
is the reason why unit tests failed to execute properly for the
past several days).
Revision
3510 -
Directory Listing
Modified
Fri May 13 06:09:49 2011 UTC
(11 years ago)
by
gross
Original Path:
trunk
some fixes for the compilation without BOOMERAMG
Revision
3508 -
Directory Listing
Modified
Fri May 13 04:15:29 2011 UTC
(11 years ago)
by
lgao
Original Path:
trunk
Add Boomer AMG as a new preconditioner
Can be used by .setPreconditioner(SolverOptions.BOOMERAMG)
and the following parallel coarsening method can be
used together with Boomer AMG preconditioner:
.setCoarsening(SolverOptions.CIJP_FIXED_RANDOM_COARSENING)
.setCoarsening(SolverOptions.CIJP_COARSENING)
.setCoarsening(SolverOptions.FALGOUT_COARSENING)
.setCoarsening(SolverOptions.PMIS_COARSENING)
.setCoarsening(SolverOptions.HMIS_COARSENING)
Note that Boomer AMG is only available when MPI is enabled.
Revision
3506 -
Directory Listing
Modified
Wed May 11 01:59:45 2011 UTC
(11 years ago)
by
jfenwick
Original Path:
trunk
Use VSL if MKLRANDOM is defined.
Use different seeds for different ranks/threads.
Use different seeds for successive calls with no seed given.
Revision
3505 -
Directory Listing
Modified
Fri Apr 29 07:09:45 2011 UTC
(11 years ago)
by
jfenwick
Original Path:
trunk
arithmetic operations now return NotImplemented if they don't know what to do.
Fixes mantis issue #54
Revision
3504 -
Directory Listing
Modified
Thu Apr 28 12:55:05 2011 UTC
(11 years ago)
by
jfenwick
Original Path:
trunk
Move arithmetic ops into explicitly named methods
Revision
3502 -
Directory Listing
Modified
Thu Apr 28 05:06:24 2011 UTC
(11 years ago)
by
gross
Original Path:
trunk
Darcy flow solver is now supporting 4 solvers
Revision
3500 -
Directory Listing
Modified
Mon Apr 11 03:09:06 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
GMRES solver for new DarcyFlux solver added
Revision
3498 -
Directory Listing
Modified
Thu Apr 7 01:12:59 2011 UTC
(11 years, 1 month ago)
by
lgao
Original Path:
trunk
Two modifications to OpenMP versioned AMG:
(1) in RungeStueben Search:
* use a smaller panel to reduce the searching time for an unkown with
the largest lambda value;
* fix the mistakes made in this function (Two places where set S is
expected, not set S^T).
(2) while construct the coarse level matrix A_C:
A_C = P^T (A P) where A is the fine level matrix and P is the
interpolation operator. Since we've already had the tranpose of P
when we process "A_temp = A P", the performance of matrix product
can be improved when we use P^T for the calculation of A_temp.
Revision
3494 -
Directory Listing
Modified
Tue Apr 5 04:12:08 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
more coal seam gas
Revision
3490 -
Directory Listing
Modified
Wed Mar 30 02:24:33 2011 UTC
(11 years, 1 month ago)
by
caltinay
Original Path:
trunk
More gcc-4.6 fixes (mostly initialized-but-unused-var warnings)
Revision
3489 -
Directory Listing
Modified
Wed Mar 30 00:46:04 2011 UTC
(11 years, 1 month ago)
by
caltinay
Original Path:
trunk
Fixed a few warnings emitted by gcc-4.6.
Revision
3487 -
Directory Listing
Modified
Mon Mar 28 03:44:22 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
some compile fixes
Revision
3486 -
Directory Listing
Modified
Sun Mar 27 22:27:45 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
bug in eigenvector calculation fixed (see mantis=594)
Revision
3485 -
Directory Listing
Modified
Thu Mar 24 22:44:40 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
some compile fixes
Revision
3484 -
Directory Listing
Modified
Thu Mar 24 05:42:07 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
some work on coal gas
Revision
3483 -
Directory Listing
Modified
Wed Mar 23 04:18:35 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
Ops: AMG MPI chould not be called yet.
Revision
3482 -
Directory Listing
Modified
Wed Mar 23 04:06:52 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
some work on AMG MPI
Revision
3478 -
Directory Listing
Modified
Wed Mar 23 04:02:39 2011 UTC
(11 years, 1 month ago)
by
gross
Original Path:
trunk
coal gas stuff
Revision
3475 -
Directory Listing
Modified
Thu Mar 17 00:28:08 2011 UTC
(11 years, 2 months ago)
by
caltinay
Original Path:
trunk
Removed an obsolete file.
Revision
3470 -
Directory Listing
Modified
Mon Mar 14 03:50:49 2011 UTC
(11 years, 2 months ago)
by
caltinay
Original Path:
trunk
Fix for mantis issue 591 (added __truediv__ methods to Data class).
Revision
3469 -
Directory Listing
Modified
Tue Feb 22 06:39:16 2011 UTC
(11 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix docstring in dudley
Revision
3468 -
Directory Listing
Modified
Tue Feb 22 06:38:57 2011 UTC
(11 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Made constructors more efficient.
Only has a very minor affect on performance
Revision
3467 -
Directory Listing
Modified
Tue Feb 8 09:31:46 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed unit test after last change.
Revision
3466 -
Directory Listing
Modified
Tue Feb 8 05:16:21 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added TEMP and friends to the list of env vars exported by scons.
Modified pycad's gmsh command line since the mesh filename may also contain
spaces.
Revision
3465 -
Directory Listing
Modified
Tue Feb 8 00:11:15 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Use the subprocess module within pycad's Triangle.
Revision
3464 -
Directory Listing
Modified
Mon Feb 7 05:17:11 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Use the subprocess module with argument list to run gmsh from pycad to avoid
having to deal with spaces in path names.
Revision
3463 -
Directory Listing
Modified
Mon Feb 7 02:09:57 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Check for gmsh in main SConstruct file and skip tests that depend on it when
the executable is not found.
Revision
3462 -
Directory Listing
Modified
Mon Feb 7 02:01:50 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Removed debug output.
Revision
3461 -
Directory Listing
Modified
Sun Feb 6 23:33:37 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Re-enabled silo on savanna as well.
Revision
3460 -
Directory Listing
Modified
Sun Feb 6 23:24:22 2011 UTC
(11 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Re-enabling MPI on savanna
Revision
3459 -
Directory Listing
Modified
Wed Feb 2 01:54:45 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Patch from Terry to fix compilation on Windows with MKL enabled.
Revision
3458 -
Directory Listing
Modified
Mon Jan 31 07:06:42 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
more on AMG under MPI
Revision
3457 -
Directory Listing
Modified
Thu Jan 27 01:38:17 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added missing cookbook figures from Anthony.
Revision
3456 -
Directory Listing
Modified
Tue Jan 25 08:20:02 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
segfault fixed
Revision
3455 -
Directory Listing
Modified
Tue Jan 25 04:23:17 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
some compilation fixes
Revision
3454 -
Directory Listing
Modified
Tue Jan 25 04:00:29 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed some minor doxygen issues.
Revision
3453 -
Directory Listing
Modified
Tue Jan 25 03:59:30 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Disabled C99 extensions on guineapig again.
Revision
3452 -
Directory Listing
Modified
Tue Jan 25 01:53:57 2011 UTC
(11 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed building cookbook, including toc (scons scans for keywords in the tex
files but not in .cls as it seems).
Also fixed a few epydoc warnings and typos.
Revision
3451 -
Directory Listing
Modified
Sun Jan 23 23:11:01 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
compilation fixes
Revision
3450 -
Directory Listing
Modified
Fri Jan 21 06:39:56 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
more compilation fixing
Revision
3449 -
Directory Listing
Modified
Fri Jan 21 05:48:15 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
compile problem in AMG fixed.
Revision
3448 -
Directory Listing
Modified
Fri Jan 21 04:38:54 2011 UTC
(11 years, 3 months ago)
by
ahallam
Original Path:
trunk
Quick final changes to cookbook to accomodate example10c problem. 'So long and thanks for all the fish.'
Revision
3447 -
Directory Listing
Modified
Fri Jan 21 04:33:42 2011 UTC
(11 years, 3 months ago)
by
ahallam
Original Path:
trunk
example10c removed from testing as it is not in the cookbook.
Revision
3446 -
Directory Listing
Modified
Thu Jan 20 06:47:07 2011 UTC
(11 years, 3 months ago)
by
gross
Original Path:
trunk
and more work toward AMG MPI
Revision
3445 -
Directory Listing
Modified
Wed Jan 19 06:02:15 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
more work towards MPI AMG
Revision
3444 -
Directory Listing
Modified
Tue Jan 18 23:17:27 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
run_domainreaders.py can only be run for MPI ranks = 1 as gmsh does not support MPI yet
Revision
3443 -
Directory Listing
Modified
Tue Jan 18 05:38:48 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
test for AMG fixed. New test set guarantees SPD stiffness matrix. Previously this was not guaranteed and could lead to singular coarse level matrices (which cause MKL based runs to fail)
Revision
3442 -
Directory Listing
Modified
Tue Jan 18 01:47:36 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
emeregncy
Revision
3441 -
Directory Listing
Modified
Fri Jan 14 01:09:09 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
clarifiaction of function names as a first step towards a MPI version of AMG
Revision
3440 -
Directory Listing
Modified
Fri Jan 14 00:04:53 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
a second AMG interpolation implemented
Revision
3439 -
Directory Listing
Modified
Fri Jan 14 00:04:01 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
some modifications to fix the cook examples runs for testing
Revision
3438 -
Directory Listing
Modified
Thu Jan 13 23:24:50 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
mesh size reduced
Revision
3437 -
Directory Listing
Modified
Mon Jan 10 05:05:15 2011 UTC
(11 years, 4 months ago)
by
plaub
Original Path:
trunk
Fixed test for new default arguments
Revision
3436 -
Directory Listing
Modified
Mon Jan 10 02:06:07 2011 UTC
(11 years, 4 months ago)
by
plaub
Original Path:
trunk
Added/modified AMG tests:
- "self.failUnless(...)" became "self.assertTrue(...)"
because fail* is soon to be deprecated,
- fixed logical error in self.assertTrue argument,
- added another test, 'testSquare'.
Added some print statements to AMG.c in verbose mode to
identify which of the stopping conditions were fulfilled.
Changed default AMG parameters for 'setNumPreSweeps' and
'setNumPostSweeps' to 1 (huge speed improvment).
P.S Beware of bugs in the above code; I have only proved
it correct, not tried it... Jokes!
Revision
3435 -
Directory Listing
Modified
Fri Jan 7 03:40:39 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
initial value changed
Revision
3434 -
Directory Listing
Modified
Fri Jan 7 03:35:58 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
initial value changed
Revision
3433 -
Directory Listing
Modified
Fri Jan 7 02:39:05 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
initial value changed
Revision
3432 -
Directory Listing
Modified
Fri Jan 7 01:32:07 2011 UTC
(11 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Made import statements a bit more specific to clean up the epydoc
Revision
3431 -
Directory Listing
Modified
Fri Jan 7 01:19:21 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
redundant setMinCoarseMatrixSparsity removed.
Revision
3430 -
Directory Listing
Modified
Thu Jan 6 09:09:19 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
import order is critical
Revision
3429 -
Directory Listing
Modified
Thu Jan 6 07:40:01 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
SAMESIGN macro added
Revision
3428 -
Directory Listing
Modified
Thu Jan 6 01:12:36 2011 UTC
(11 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Fixed errors (and space/tabs) in geometry.py
Added unit tests
Revision
3427 -
Directory Listing
Modified
Thu Jan 6 00:11:45 2011 UTC
(11 years, 4 months ago)
by
ahallam
Original Path:
trunk
Missing script.
Revision
3426 -
Directory Listing
Modified
Wed Jan 5 02:51:35 2011 UTC
(11 years, 4 months ago)
by
ahallam
Original Path:
trunk
Added new example tests.
Revision
3425 -
Directory Listing
Modified
Wed Jan 5 02:50:38 2011 UTC
(11 years, 4 months ago)
by
ahallam
Original Path:
trunk
Added new example tests.
Revision
3424 -
Directory Listing
Modified
Wed Jan 5 00:24:46 2011 UTC
(11 years, 4 months ago)
by
gross
Original Path:
trunk
memory leak in UMFPACK interface fixed
Revision
3423 -
Directory Listing
Modified
Thu Dec 16 04:24:13 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fix a typo in geometry.py
Revision
3422 -
Directory Listing
Modified
Mon Dec 13 23:27:47 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Updated shake75 options file to use visit 2.2
Revision
3421 -
Directory Listing
Modified
Mon Dec 13 23:15:01 2010 UTC
(11 years, 5 months ago)
by
artak
Original Path:
trunk
semi-colon is missing
Revision
3417 -
Directory Listing
Modified
Sun Dec 12 23:40:27 2010 UTC
(11 years, 5 months ago)
by
artak
Original Path:
trunk
Treat warnings as errors is disabled.
Revision
3412 -
Directory Listing
Modified
Fri Dec 10 02:03:49 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
some fixes for MKL lapack
Revision
3411 -
Directory Listing
Modified
Thu Dec 9 22:42:02 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
some cleaning
Revision
3410 -
Directory Listing
Modified
Thu Dec 9 07:02:52 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Minor changes to cookbook, gravity example.
Revision
3409 -
Directory Listing
Modified
Thu Dec 9 07:01:23 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
minor changes to examples before holiday.
Revision
3407 -
Directory Listing
Modified
Wed Dec 8 05:16:08 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Obsolete
Revision
3406 -
Directory Listing
Modified
Wed Dec 8 01:09:37 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook documentation for release.
Revision
3405 -
Directory Listing
Modified
Wed Dec 8 01:09:06 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Changes to example09 for memory footprint. One change too help wording in layer_cake function. example09b removed from testing. Not for impending release.
Revision
3404 -
Directory Listing
Modified
Tue Dec 7 10:24:32 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
missing file
Revision
3403 -
Directory Listing
Modified
Tue Dec 7 08:13:51 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
some small fixes
Revision
3402 -
Directory Listing
Modified
Tue Dec 7 07:36:12 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
AMG support now block size > 3 (requires clapack or MKL).
additional diagnostics for AMG
Revision
3400 -
Directory Listing
Modified
Mon Dec 6 02:23:07 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Moved vtkCellType.h to weipa where it belongs now.
Revision
3399 -
Directory Listing
Modified
Mon Dec 6 02:02:16 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Updated VTK files to reflect changes to the writer.
Revision
3398 -
Directory Listing
Modified
Mon Dec 6 00:02:33 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed the quad mask in a very specific case and changed saveVTK to write a
specific value for unused nodes instead of the first one which breaks unit
tests depending on the number of ranks used.
Still need to rebaseline some VTK files so the tests pass.
Revision
3397 -
Directory Listing
Modified
Sun Dec 5 22:46:25 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed an issue in saveVTK/Silo.
Revision
3396 -
Directory Listing
Modified
Fri Dec 3 08:24:16 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
wrong pointer handed
Revision
3395 -
Directory Listing
Modified
Fri Dec 3 06:30:35 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
small correction
Revision
3394 -
Directory Listing
Modified
Fri Dec 3 06:07:08 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Nasty hack to dodge a linking issue for serial builds on savanna
Revision
3393 -
Directory Listing
Modified
Fri Dec 3 04:14:56 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
shake24 (darwin) needs -L/usr/lib to pull correct gcc library.
The python library path was also not entirely correct - fixed.
Revision
3392 -
Directory Listing
Modified
Thu Dec 2 03:26:29 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook. Includes new section on variable meshing. To be reviewed.
Revision
3391 -
Directory Listing
Modified
Thu Dec 2 02:25:53 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
seg fault fixed.
Revision
3390 -
Directory Listing
Modified
Thu Dec 2 00:34:37 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
RandomData added
Revision
3389 -
Directory Listing
Modified
Wed Dec 1 23:03:35 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Some changes to the cookbook examples. Starting Inversion experimentation.
Revision
3388 -
Directory Listing
Modified
Mon Nov 29 06:07:07 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added quotes around some variables to fix running scripts located in a
directory whose name contains spaces.
Revision
3387 -
Directory Listing
Modified
Thu Nov 25 07:09:23 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed some annoying typos.
Revision
3386 -
Directory Listing
Modified
Thu Nov 25 05:05:50 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
scons choked on the newlines within the parameter list. Fixed.
Revision
3385 -
Directory Listing
Modified
Thu Nov 25 04:41:33 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook, something is wrong with the sconstruct though
Revision
3384 -
Directory Listing
Modified
Thu Nov 25 03:28:01 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Cookbook lumping updates.
Revision
3383 -
Directory Listing
Modified
Thu Nov 25 02:17:51 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed some typos and added missing symlinks.
Revision
3382 -
Directory Listing
Modified
Thu Nov 25 00:43:18 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
I've added better credits for dev team.
There is a new page just before the contents page with current dev team
and a more detailed list in the user guide appendix.
Please check this and let me know if you think there are errors or
omissions.
Also fixed a typo.
Removed reference to python style files we no longer use from the
license file.
Revision
3381 -
Directory Listing
Modified
Wed Nov 24 23:37:55 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Proofing of lumping.tex
Revision
3380 -
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Modified
Wed Nov 24 05:03:25 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
update to change list
Revision
3379 -
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Modified
Wed Nov 24 04:48:49 2010 UTC
(11 years, 5 months ago)
by
gross
Original Path:
trunk
some clarification on lumping
Revision
3378 -
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Modified
Tue Nov 23 05:09:25 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Pass dictionary of data objects to EscriptDataset as kwargs in DataManager.
Revision
3377 -
Directory Listing
Modified
Tue Nov 23 02:01:20 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Removed empty esys, include and lib directories since the install prefix is
variable now. Don't shoot me for this if this hurts.
Revision
3376 -
Directory Listing
Modified
Tue Nov 23 01:56:20 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Invoke run-escript instead of escript in runTest.
Revision
3375 -
Directory Listing
Modified
Tue Nov 23 00:37:23 2010 UTC
(11 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fix to unit tests
Revision
3374 -
Directory Listing
Modified
Tue Nov 23 00:30:20 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Fixes to example scripts.
Revision
3373 -
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Modified
Tue Nov 23 00:29:07 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
New figures.
Revision
3372 -
Directory Listing
Modified
Mon Nov 22 23:10:03 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added missing import to fix unit test
Revision
3371 -
Directory Listing
Modified
Mon Nov 22 06:13:47 2010 UTC
(11 years, 5 months ago)
by
caltinay
Original Path:
trunk
Sort data objects by name before passing them to the EscriptDataset object.
This addresses #537.
Revision
3370 -
Directory Listing
Modified
Sun Nov 21 23:22:25 2010 UTC
(11 years, 5 months ago)
by
ahallam
Original Path:
trunk
Rearranged figures for release.
Revision
3369 -
Directory Listing
Modified
Fri Nov 19 06:26:11 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
matrix balance introduced in paso
Revision
3368 -
Directory Listing
Modified
Fri Nov 19 05:59:46 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
3d interpolateTable support.
New more generic interface for table interpolation.
tests and doco updated
Revision
3367 -
Directory Listing
Modified
Fri Nov 19 02:07:25 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
added quick intro to visualization with VisIt and fixed a file reference.
Revision
3366 -
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Modified
Thu Nov 18 23:41:42 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
esys.weipa Python interface documentation.
Revision
3365 -
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Modified
Thu Nov 18 10:49:40 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed compilation without VisIt.
Revision
3364 -
Directory Listing
Modified
Thu Nov 18 05:51:44 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Expose visitInitialize and visitPublishData through the python interface.
Revision
3363 -
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Modified
Thu Nov 18 05:49:45 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Catch some corner cases in weipa's VisIt controller to make it more foolproof
and allow reinitialization.
Revision
3362 -
Directory Listing
Modified
Thu Nov 18 04:59:44 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Made the VisIt interface less verbose in non-debug mode and removed unused
includes.
Revision
3361 -
Directory Listing
Modified
Thu Nov 18 01:56:36 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Minor enhancement.
Revision
3360 -
Directory Listing
Modified
Thu Nov 18 00:20:21 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fix some epydoc errors
Fixed issue 564
removed minimize.py since it hasn't worked in who knows how long
Revision
3359 -
Directory Listing
Modified
Wed Nov 17 23:32:36 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixing problem with ./utest.sh including full build path
Revision
3358 -
Directory Listing
Modified
Wed Nov 17 08:02:32 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
a more flexiblae version of safeDiv
Revision
3357 -
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Modified
Wed Nov 17 06:21:37 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed a crash when loading data from netCDF files.
Revision
3356 -
Directory Listing
Modified
Wed Nov 17 05:27:47 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Finley type Finley_Tri3Face_Contact is no longer untested within weipa.
Revision
3355 -
Directory Listing
Modified
Tue Nov 16 06:35:06 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed building with boost < 1.40 by
- removing the saveVTK method from dudley's MeshAdapter completely
(no point introducing it now when we are trying to get rid of it soon)
- adding a helper function to weipa's python layer which can be called from C++
with older boost versions.
Revision
3354 -
Directory Listing
Modified
Tue Nov 16 04:48:09 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fix problem with superclass init
Revision
3353 -
Directory Listing
Modified
Tue Nov 16 04:32:40 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
some clarification on AMG in the documentation
Revision
3352 -
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Modified
Tue Nov 16 03:58:09 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
exposure of AMG options
Revision
3351 -
Directory Listing
Modified
Tue Nov 16 02:39:40 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
modified approach for AMG coarsning using a panel
Revision
3350 -
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Modified
Mon Nov 15 05:14:43 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed MSVC90 file as per Gordon's report.
Revision
3349 -
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Modified
Mon Nov 15 05:09:56 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
escript now supports out-of-tree builds.
All build and test files are now created under a user-definable build_dir
directory.
This also fixes issue 291.
Removed most svn:ignore props since they are no longer required.
Revision
3348 -
Directory Listing
Modified
Fri Nov 12 05:55:50 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Added weipa import statements to the relevant parts in user guide and cookbook.
Documented the deprecation of esys.escript.saveVTK in the changes chapter.
Revision
3347 -
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Modified
Fri Nov 12 04:58:27 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
-Do not compare mesh variables (like owner, color etc) in the saveVTK tests
since they depend on the number of ranks.
-Fixed a problem where ranks without data samples can't know whether a
reduced mesh is to be used or not.
Revision
3346 -
Directory Listing
Modified
Fri Nov 12 01:19:02 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Replaced usage of esys.escript.util.saveVTK by weipa.saveVTK in all python
scripts.
Revision
3345 -
Directory Listing
Modified
Thu Nov 11 23:51:45 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Moved dudley saveVTK tests to weipa and removed unneeded files.
Revision
3344 -
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Modified
Thu Nov 11 23:26:52 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Phew!
-escript, finley, and dudley now uses weipa's saveVTK implementation
-moved tests from finley to weipa accordingly; dudley still to do
-rebaselined all test files
-fixed a few issues in weipa.saveVTK, e.g. saving metadata without schema
-added a deprecation warning to esys.escript.util.saveVTK
-todo: change doco, tests and other places to use weipa.saveVTK
Revision
3343 -
Directory Listing
Modified
Wed Nov 10 02:01:29 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Rename users guide to user.pdf from guide.pdf to match the conventions
we follow with the other files.
Corrected the description of Einstein convention from "convenient"
to "compact".
Revision
3342 -
Directory Listing
Modified
Tue Nov 9 03:41:58 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed interpolation for Line3Macro elements in weipa.
Revision
3341 -
Directory Listing
Modified
Mon Nov 8 21:34:01 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Renamed MS options file.
Revision
3340 -
Directory Listing
Modified
Mon Nov 8 01:25:58 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Relax python version check.
Only checks X.Y not X.Y.Z
Fixes mantis #556
Revision
3339 -
Directory Listing
Modified
Fri Nov 5 05:30:31 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed more package clashing problems.
Package install.pdf not install.tex
Changed title on most documents to esys-Escript except for the cookbook coz I like ti that way.
Revision
3338 -
Directory Listing
Modified
Fri Nov 5 03:50:51 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Remove old name for man page to prevent clash with erlang.
Changed default library to link for boost to boost_python-mt
Revision
3337 -
Directory Listing
Modified
Fri Nov 5 03:20:19 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Work around weird scons behaviour
Revision
3336 -
Directory Listing
Modified
Fri Nov 5 00:28:44 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed bib entry
Revision
3335 -
Directory Listing
Modified
Wed Nov 3 05:02:57 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fix the launcher so that it can give an environment even if buildvars is not present.
Environment now includes scons for standalone builds.
Fixes and cleanup for the install documentation.
scons TEMPLATES updated to define the optionfile version by default.
...mumble
finley no longer imports escript into the default namespace
...
Revision
3334 -
Directory Listing
Modified
Wed Nov 3 00:46:56 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Added 3.2 to changes page
Revision
3333 -
Directory Listing
Modified
Mon Nov 1 06:08:05 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Updated lapack paths on guineapig.
Revision
3332 -
Directory Listing
Modified
Mon Nov 1 05:26:55 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Copy run-escript over for a prefix install.
Fixes mantis issue: 551
Revision
3331 -
Directory Listing
Modified
Mon Nov 1 05:21:18 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Appendix done. Fixed some overfull hboxes.
Revision
3330 -
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Modified
Mon Nov 1 04:29:09 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Finished user's guide chapters up to Appendix.
Revision
3329 -
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Modified
Fri Oct 29 05:55:55 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Faultsystems2d. not finished yet.
Revision
3328 -
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Modified
Fri Oct 29 02:21:42 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed script filename
Revision
3327 -
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Modified
Fri Oct 29 02:08:37 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
missing omp function added.
Revision
3326 -
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Modified
Fri Oct 29 00:45:32 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
6.2 Darcy Flux. Note that I commented the gravity flow subsection since it's
not written.
Revision
3325 -
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Modified
Fri Oct 29 00:30:51 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Section 6.1.
Revision
3324 -
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Modified
Thu Oct 28 23:43:09 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Finished pycad chapter 5, regenerated eps files
Revision
3323 -
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Modified
Thu Oct 28 09:53:46 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
some openmp fizes.
Revision
3322 -
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Modified
Thu Oct 28 05:26:37 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Adapt install guide to new style.
Simplify package building scripts to autodetect necessary info and build control file automatically.
Revision
3321 -
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Modified
Thu Oct 28 05:02:41 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
a problem with surface orientation fixed.
Revision
3320 -
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Modified
Thu Oct 28 03:29:51 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
This fixes the scons warning about not finding the Intel top dir on Savanna.
Revision
3319 -
Directory Listing
Modified
Thu Oct 28 03:14:27 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
export PATH to scons when creating environment so tools in non-default
locations such as latex on savanna are found.
Revision
3318 -
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Modified
Thu Oct 28 01:05:36 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
This should fix building paso without OpenMP.
Revision
3317 -
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Modified
Thu Oct 28 00:50:41 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Removed bogus mpi.h includes, replaced others by our esysUtils wrapper
and rearranged so that the wrapper always comes before netcdf which fixes
linking problems when disabling mpi on systems with netCDF 4.x.
Revision
3316 -
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Modified
Wed Oct 27 01:43:21 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Finished Chapter 4, added missing bibliography entries for Trilinos and SuperLU
Revision
3315 -
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Modified
Wed Oct 27 01:20:27 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
bug in sparse matrixmatrix fixed.
Revision
3314 -
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Modified
Tue Oct 26 22:22:20 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
output removed/leaned up
Revision
3313 -
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Modified
Tue Oct 26 22:00:09 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
some print statements removed
Revision
3312 -
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Modified
Tue Oct 26 07:54:58 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
last step for a clean up version of the AMG
Revision
3311 -
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Modified
Tue Oct 26 05:43:25 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Added raggedbottom to last page before appendix.
Condensed the latex picture figures a bit
Revision
3310 -
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Modified
Tue Oct 26 03:58:17 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed some pdf bookmarks and added the index package
Revision
3309 -
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Modified
Tue Oct 26 03:56:26 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Updated escript section with added DataManager reference.
Revision
3308 -
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Modified
Tue Oct 26 03:24:54 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Moved listing and class up a level.
Removed hackscore from cookbook.
Made cookbook use the new stuff - removed old stuff
Revision
3307 -
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Modified
Tue Oct 26 01:19:19 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Put index back in and added link to index and biblio to the TOC.
Revision
3306 -
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Modified
Mon Oct 25 05:09:13 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Commented declaremodule and modulesynopsis.
Revision
3305 -
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Modified
Mon Oct 25 05:04:22 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fancy shuffling
Revision
3304 -
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Modified
Mon Oct 25 04:43:48 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Disabled building html user's guide - it doesn't read the class file properly
and the PDF now supports links.
Revision
3303 -
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Modified
Mon Oct 25 04:33:31 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
more clean up work on the AMG
Revision
3302 -
Directory Listing
Modified
Mon Oct 25 01:50:07 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed appendix so hyperref generates links properly
Revision
3301 -
Directory Listing
Modified
Mon Oct 25 01:27:54 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Modified layout of descriptions.
Fixed some overfull hboxes
Revision
3300 -
Directory Listing
Modified
Mon Oct 25 00:22:14 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Some text fixes
Revision
3299 -
Directory Listing
Modified
Sun Oct 24 23:44:18 2010 UTC
(11 years, 6 months ago)
by
gross
Original Path:
trunk
some fixes
Revision
3297 -
Directory Listing
Modified
Fri Oct 22 05:47:37 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
small fix
Revision
3296 -
Directory Listing
Modified
Fri Oct 22 02:53:24 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
hackscore removal.
Revision
3294 -
Directory Listing
Modified
Fri Oct 22 01:15:56 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Tweaks
Revision
3293 -
Directory Listing
Modified
Thu Oct 21 23:18:32 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
user's guide builds again with new class file. The cleanup can commence...
Revision
3292 -
Directory Listing
Modified
Thu Oct 21 05:02:49 2010 UTC
(11 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Adding the class file
Revision
3291 -
Directory Listing
Modified
Thu Oct 21 00:37:42 2010 UTC
(11 years, 6 months ago)
by
caltinay
Original Path:
trunk
Work on user's guide up to section 3.2 (exclusive), including some text on
new DataManager class.
Also reworked a couple of images.
This should be the last commit of the guide before changes to the latex class.
Revision
3290 -
Directory Listing
Modified
Wed Oct 20 08:31:56 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
small fixes
Revision
3289 -
Directory Listing
Modified
Wed Oct 20 07:07:11 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
missing factor fixed.
Revision
3288 -
Directory Listing
Modified
Tue Oct 19 01:08:31 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Corrections to user guide sections 1.5 and 1.6.
Converted backgrounds of the very complex stokes flow eps files by raster
images leaving the vectors untouched so the change is barely visible but
makes loading the PDF page some orders of magnitude faster.
Revision
3287 -
Directory Listing
Modified
Tue Oct 19 00:42:22 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
complaint from valgrind about an uninitialized value fixed (no impact on result)
Revision
3286 -
Directory Listing
Modified
Tue Oct 19 00:36:27 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
small memory leak fixed.
Revision
3285 -
Directory Listing
Modified
Tue Oct 19 00:28:00 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
bug in initialization step fixed.
Revision
3284 -
Directory Listing
Modified
Mon Oct 18 23:48:04 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
old AMLI code collected in a single file. It does not compile and should be merged with RecILU
Revision
3283 -
Directory Listing
Modified
Mon Oct 18 22:39:28 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
AMG reengineered, BUG is Smoother fixed.
Revision
3282 -
Directory Listing
Modified
Fri Oct 15 06:59:32 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Don't build guide_pdf when only guide_html was requested.
Revision
3281 -
Directory Listing
Modified
Fri Oct 15 06:52:34 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
latex2html doesn't like './' in graphicspath, so removed it.
Revision
3280 -
Directory Listing
Modified
Fri Oct 15 05:11:11 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Corrections to 1.4 of the user's guide.
Revision
3279 -
Directory Listing
Modified
Fri Oct 15 04:02:06 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Some corrections to 1.3 of user's guide and defined graphicspath globally.
Revision
3278 -
Directory Listing
Modified
Fri Oct 15 02:00:45 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated section 1.2 of user's guide.
Revision
3277 -
Directory Listing
Modified
Fri Oct 15 01:06:24 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
This should keep scons happy on systems without pdflatex issuing a warning
to the user. Also updated all other doc sconscript files to use a global
release_dir prefix so we can easily move the files somewhere else if req'd.
Revision
3276 -
Directory Listing
Modified
Thu Oct 14 21:38:05 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
new damage solver
Revision
3275 -
Directory Listing
Modified
Thu Oct 14 06:15:27 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
As it turns out the tangential operator implementation is not a good idea.
This a check in to save the last version of this approach before starting using a different method.
Revision
3274 -
Directory Listing
Modified
Thu Oct 14 06:14:30 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Some initial corrections to the user's guide.
Revision
3273 -
Directory Listing
Modified
Thu Oct 14 05:44:08 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed guide_html dependencies so the pages are really rebuilt when source
files change.
Revision
3272 -
Directory Listing
Modified
Thu Oct 14 04:02:06 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Similar to last commit but for cookbook. Can't test since cookbook doesn't
build at the moment.
Revision
3271 -
Directory Listing
Modified
Thu Oct 14 02:16:00 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
-use existing scons pdflatex target for user's guide
-create temporary files in build directory rather than source directory
-make latex less verbose if verbosity option is off
This fixes #291 for user's guide.
Revision
3270 -
Directory Listing
Modified
Thu Oct 14 00:30:11 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
added -dEPSCrop option to ps2pdf so graphics are cropped as expected.
Revision
3269 -
Directory Listing
Modified
Wed Oct 13 03:21:50 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Fixed some intel compiler warnings.
Put linearPDEs back the way it was and present a common interface for dudley and finley (as per Lutz)
Revision
3268 -
Directory Listing
Modified
Wed Oct 13 02:16:23 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Do not ignore unknown options since the warnings are not easily visible,
bail out instead.
Revision
3267 -
Directory Listing
Modified
Wed Oct 13 02:12:06 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Renamed restarts.py to datamanager.py, added a method to explicitly set the
domain without adding data. Calling export() without domain/data will now
output a warning. Some additional cleanup.
Revision
3266 -
Directory Listing
Modified
Wed Oct 13 00:32:46 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Disable MPI on shake24 due to conflicting installations in default locations.
Revision
3265 -
Directory Listing
Modified
Tue Oct 12 04:42:03 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated relevant sections in install guide to reflect scons option changes.
Standalone section needs to be updated before the release.
Revision
3264 -
Directory Listing
Modified
Tue Oct 12 04:40:06 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Minor changes to avoid optimiser bug in intel-10
Revision
3263 -
Directory Listing
Modified
Tue Oct 12 01:16:21 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated convection script to use escript DataManager.
Revision
3262 -
Directory Listing
Modified
Mon Oct 11 07:19:40 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
header file include added
Revision
3261 -
Directory Listing
Modified
Mon Oct 11 04:25:42 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Disable some unit tests for dudley until I can fix MPI failures
Revision
3260 -
Directory Listing
Modified
Mon Oct 11 03:41:35 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Removing dead files
Revision
3259 -
Directory Listing
Modified
Mon Oct 11 01:48:14 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Merging dudley and scons updates from branches
Revision
3250 -
Directory Listing
Modified
Thu Oct 7 01:49:18 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Fixed a declaration/definition mismatch.
Revision
3245 -
Directory Listing
Modified
Tue Oct 5 23:17:56 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Removing out of date scripts
Revision
3233 -
Directory Listing
Modified
Mon Oct 4 00:54:26 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Fixed build error
Revision
3232 -
Directory Listing
Modified
Fri Oct 1 02:08:38 2010 UTC
(11 years, 7 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook, new chapter DC Resis and IP. Using new packages hyperref, natbib
Revision
3222 -
Directory Listing
Modified
Wed Sep 29 03:55:44 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
This should make windoze happy.
Revision
3209 -
Directory Listing
Modified
Mon Sep 27 01:54:46 2010 UTC
(11 years, 7 months ago)
by
caltinay
Original Path:
trunk
Added missing libraries to escriptconvert.
Revision
3208 -
Directory Listing
Modified
Sun Sep 26 23:31:17 2010 UTC
(11 years, 7 months ago)
by
jfenwick
Original Path:
trunk
List tests as not working with MPI
Revision
3201 -
Directory Listing
Modified
Thu Sep 23 06:54:18 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
bug in meanValue fixed.
Revision
3200 -
Directory Listing
Modified
Thu Sep 23 06:53:36 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
more damage
Revision
3195 -
Directory Listing
Modified
Wed Sep 22 00:28:04 2010 UTC
(11 years, 7 months ago)
by
ahallam
Original Path:
trunk
Shortened runtime of cookbook examples to aid testing.
Revision
3194 -
Directory Listing
Modified
Tue Sep 21 09:14:56 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
missing files
Revision
3193 -
Directory Listing
Modified
Tue Sep 21 06:56:44 2010 UTC
(11 years, 7 months ago)
by
gross
Original Path:
trunk
more clean up in AMG
Revision
3192 -
Directory Listing
Modified
Fri Sep 17 04:02:57 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
- weipa's saveVTK will now save multiple files if the data objects to write are
not on the same mesh.
- the save* methods now also add the appropriate file extension if not already
supplied
Revision
3191 -
Directory Listing
Modified
Fri Sep 17 00:44:20 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Use consistent naming for domain, mesh and 'chunks'
Revision
3190 -
Directory Listing
Modified
Thu Sep 16 23:29:09 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Disable some cookbook examples until we can get issues sorted out
Revision
3188 -
Directory Listing
Modified
Thu Sep 16 04:36:38 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed deletion of old restart directories with a checkpoint freq>1.
Revision
3186 -
Directory Listing
Modified
Thu Sep 16 01:23:53 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added checkpoint frequency setting to DataManager so that visualisation files
can be created independent of restart files. Also removed the overhead of
creating an EscriptDataset instance for the restart-only case.
Revision
3185 -
Directory Listing
Modified
Thu Sep 16 00:30:09 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Weipa now supports initialization from DataConstant instances.
Revision
3183 -
Directory Listing
Modified
Tue Sep 14 23:09:59 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Adding timing information to unit tests.
Revision
3182 -
Directory Listing
Modified
Tue Sep 14 06:05:55 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Temporarily removing example8c from unit testing.
It seems to lock the test - or it runs for rediculous timeframes.
Revision
3181 -
Directory Listing
Modified
Tue Sep 14 05:01:00 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fix to buggy recovery of colouring information.
Unfortunately unable to fix buggy spelling of colour.
Revision
3180 -
Directory Listing
Modified
Tue Sep 14 03:39:55 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
some fixes for the case that no direc solver is available.
Revision
3179 -
Directory Listing
Modified
Tue Sep 14 01:55:24 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
typo fixed
Revision
3178 -
Directory Listing
Modified
Tue Sep 14 00:31:59 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Corrected check for python version in launcher, added a function get_buildvar
for convenience.
Revision
3177 -
Directory Listing
Modified
Mon Sep 13 10:30:24 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
running vresion
Revision
3176 -
Directory Listing
Modified
Sat Sep 11 01:09:54 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Maybe this will finally make the Mac happy.
Revision
3175 -
Directory Listing
Modified
Fri Sep 10 09:03:38 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
intial checkin
Revision
3174 -
Directory Listing
Modified
Fri Sep 10 03:55:18 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Enabled debian's lapack on shake75.
Revision
3168 -
Directory Listing
Modified
Wed Sep 8 23:01:25 2010 UTC
(11 years, 8 months ago)
by
ahallam
Original Path:
trunk
Missing *.png
Revision
3167 -
Directory Listing
Modified
Wed Sep 8 03:24:29 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Only run pyvisi tests if VTK was enabled at configuration time.
Revision
3166 -
Directory Listing
Modified
Tue Sep 7 23:47:06 2010 UTC
(11 years, 8 months ago)
by
ahallam
Original Path:
trunk
Fix doc build error. I will add the figure when I come in tomorrow and turn Darra on.
Revision
3165 -
Directory Listing
Modified
Tue Sep 7 09:15:16 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Next attempt at fixing mac test failure.
Revision
3164 -
Directory Listing
Modified
Tue Sep 7 09:10:09 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Do not use VTK on guineapig - pyvisi is deprecated anyway.
Revision
3162 -
Directory Listing
Modified
Tue Sep 7 05:29:32 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Changes to match packages in the debian repo.
Also got rid of lib/pyversion
Revision
3160 -
Directory Listing
Modified
Mon Sep 6 09:17:28 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
bug fixed in RILU and test modified.
Revision
3159 -
Directory Listing
Modified
Mon Sep 6 06:59:31 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
AMG is using now a simpler interface to the Smoothers.
Revision
3158 -
Directory Listing
Modified
Mon Sep 6 06:09:11 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
GS and Jacobi are now used through the same interface.
Revision
3154 -
Directory Listing
Modified
Sun Sep 5 22:49:51 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Possible fix for mac linker error.
Revision
3153 -
Directory Listing
Modified
Sun Sep 5 01:31:49 2010 UTC
(11 years, 8 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook. Fixes to SWP and new Gravitational Potential
Revision
3151 -
Directory Listing
Modified
Fri Sep 3 05:46:12 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
More weipa tests including saveVTK.
Revision
3150 -
Directory Listing
Modified
Fri Sep 3 05:40:27 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Removed executable prop from non-executables.
Revision
3148 -
Directory Listing
Modified
Fri Sep 3 02:09:47 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Another attempt to patch the X issue
Revision
3147 -
Directory Listing
Modified
Fri Sep 3 02:03:05 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Don't clear domain on error. Moved adding Metadata-tags to the C++ level.
Revision
3146 -
Directory Listing
Modified
Fri Sep 3 01:29:21 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Properly initialise data centering variable.
Revision
3143 -
Directory Listing
Modified
Fri Sep 3 00:31:55 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
-Moved finley specifics into weipa subclasses
-EscriptDataset is now the only weipa class exported in Windows
-Some weipa code cleanup
Revision
3142 -
Directory Listing
Modified
Thu Sep 2 23:58:47 2010 UTC
(11 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Trying to fix X problem
Revision
3140 -
Directory Listing
Modified
Thu Sep 2 07:26:43 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
a more robust version of MINRES (really?)
Revision
3139 -
Directory Listing
Modified
Thu Sep 2 06:37:43 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed a typo.
Revision
3135 -
Directory Listing
Modified
Thu Sep 2 03:28:39 2010 UTC
(11 years, 8 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook scripts. Gravitation Examples.
Revision
3133 -
Directory Listing
Modified
Thu Sep 2 02:04:29 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added methods to set mesh labels and units to DataManager.
Revision
3132 -
Directory Listing
Modified
Thu Sep 2 01:48:31 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Removed unused variable.
Revision
3131 -
Directory Listing
Modified
Thu Sep 2 01:40:47 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
DataManager now uses Python magic to figure out how to load the domain without
hardcoding anything finley-specific.
Revision
3129 -
Directory Listing
Modified
Wed Sep 1 07:58:23 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed unit test.
Revision
3128 -
Directory Listing
Modified
Wed Sep 1 03:54:09 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
-Added mesh axis label/unit and variable unit support to weipa's Silo writer
-Created EscriptDataset python wrapper
-Some code cleanup and a ghost zone fix for the VisIt interface
Revision
3125 -
Directory Listing
Modified
Tue Aug 31 05:37:30 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
more code cleaning
Revision
3121 -
Directory Listing
Modified
Mon Aug 30 23:12:58 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
missing file
Revision
3120 -
Directory Listing
Modified
Mon Aug 30 10:48:00 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
first iteration on Paso code clean up
Revision
3116 -
Directory Listing
Modified
Mon Aug 30 00:54:52 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Prepared weipa to use Silo's HDF5 driver & compression which performs better
than the default PDB. Code is disabled though because NetCDF 4 is currently
interfering (Unidata has been contacted). Added a note about this.
Revision
3113 -
Directory Listing
Modified
Fri Aug 27 04:04:56 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed commit from rev.2867 which broke the ability to specify script parameters.
Revision
3112 -
Directory Listing
Modified
Thu Aug 26 07:10:36 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
missing include added.
Revision
3111 -
Directory Listing
Modified
Thu Aug 26 06:49:42 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
some diagnostics for time step backtracing added
Revision
3110 -
Directory Listing
Modified
Thu Aug 26 05:42:18 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed a typo.
Revision
3109 -
Directory Listing
Modified
Thu Aug 26 04:33:18 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Added accessor for the simulation cycle and log which directory was used to
restart.
Revision
3108 -
Directory Listing
Modified
Thu Aug 26 03:43:05 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
More weipa tests.
Revision
3107 -
Directory Listing
Modified
Thu Aug 26 03:41:28 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Removed ugly #defines in favour of a class.
Revision
3106 -
Directory Listing
Modified
Wed Aug 25 08:15:38 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Fixed export when 'work_dir' is set to sth other than the current dir.
Revision
3105 -
Directory Listing
Modified
Wed Aug 25 04:37:52 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
bug fixed in the Gauss Seidel
Revision
3104 -
Directory Listing
Modified
Wed Aug 25 00:53:25 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Set up initial test suite files for weipa and some basic preliminary tests.
Revision
3103 -
Directory Listing
Modified
Tue Aug 24 07:01:33 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
test fix
Revision
3102 -
Directory Listing
Modified
Tue Aug 24 06:14:21 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
Inject the DataManager class to the escript namespace.
Revision
3101 -
Directory Listing
Modified
Tue Aug 24 06:08:12 2010 UTC
(11 years, 8 months ago)
by
caltinay
Original Path:
trunk
weipa's saveVTK now stores metadata schema & string as expected.
Revision
3100 -
Directory Listing
Modified
Mon Aug 23 09:31:09 2010 UTC
(11 years, 8 months ago)
by
gross
Original Path:
trunk
bug in ILU0 fixed.
Revision
3099 -
Directory Listing
Modified
Sun Aug 22 04:35:15 2010 UTC
(11 years, 8 months ago)
by
ahallam
Original Path:
trunk
Gravitational Potential Example- Needs some tuning.
Revision
3098 -
Directory Listing
Modified
Fri Aug 20 08:08:27 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
fix to the GaussSeidel
Revision
3097 -
Directory Listing
Modified
Fri Aug 20 04:59:12 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
some modifications to the GaussSeidel
Revision
3096 -
Directory Listing
Modified
Thu Aug 19 01:40:52 2010 UTC
(11 years, 9 months ago)
by
caltinay
Original Path:
trunk
-New VisIt simulation control interface in weipa (uses VisIt's simv2)
-Rewrote restarts.py to be a more generic data manager for restarts and exports
-Removed weipa python file since the functionality is now handled by restarts.py
Revision
3095 -
Directory Listing
Modified
Tue Aug 17 03:42:31 2010 UTC
(11 years, 9 months ago)
by
caltinay
Original Path:
trunk
Fixed building libescriptreader for the VisIt plugin.
Revision
3094 -
Directory Listing
Modified
Fri Aug 13 08:38:06 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
The MPI and sequational GAUSS_SEIDEL have been merged.
The couring and main diagonal pointer is now manged by the patternm which means that they are calculated once only even if the preconditioner is deleted.
Revision
3093 -
Directory Listing
Modified
Fri Aug 13 08:07:45 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
problem with no MPI compilation fixed
Revision
3092 -
Directory Listing
Modified
Fri Aug 13 07:55:03 2010 UTC
(11 years, 9 months ago)
by
caltinay
Original Path:
trunk
Added getDataFlat() which will be used by the VisIt simulation interface
Revision
3091 -
Directory Listing
Modified
Fri Aug 13 07:47:57 2010 UTC
(11 years, 9 months ago)
by
caltinay
Original Path:
trunk
-fixed cleanup on error when invoking escriptconvert in parallel
-fixed saving VTK files on one rank if data was loaded in chunks
-cleaned up EscriptDataset and split a couple of methods
Revision
3089 -
Directory Listing
Modified
Mon Aug 9 07:20:58 2010 UTC
(11 years, 9 months ago)
by
ahallam
Original Path:
trunk
Updates to example scripts - should now be working except for example09b.py which needs more memory.
Revision
3084 -
Directory Listing
Modified
Wed Aug 4 03:26:50 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
small bug fixed.
Revision
3083 -
Directory Listing
Modified
Tue Aug 3 06:34:35 2010 UTC
(11 years, 9 months ago)
by
caltinay
Original Path:
trunk
Updated some svn:ignore props.
Revision
3081 -
Directory Listing
Modified
Tue Aug 3 05:36:42 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
a light restart manager added.
Revision
3078 -
Directory Listing
Modified
Tue Aug 3 03:12:16 2010 UTC
(11 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Switched the build_dir keyword param to variant_dir.
Should fix issue 525.
Revision
3077 -
Directory Listing
Modified
Mon Aug 2 23:01:14 2010 UTC
(11 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fix my error
Revision
3076 -
Directory Listing
Modified
Mon Aug 2 05:21:40 2010 UTC
(11 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Removing hardcoded savanna from the SConstruct file.
Revision
3075 -
Directory Listing
Modified
Wed Jul 28 02:51:20 2010 UTC
(11 years, 9 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook example. Lumping turned off for order 2 models until bug resolves.
Revision
3074 -
Directory Listing
Modified
Tue Jul 27 01:47:45 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
tolerance for PCG relaxed.
Revision
3073 -
Directory Listing
Modified
Mon Jul 26 06:10:50 2010 UTC
(11 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Rename files to fix build problem
Revision
3072 -
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Modified
Fri Jul 23 07:10:03 2010 UTC
(11 years, 9 months ago)
by
gross
Original Path:
trunk
wrong file
Revision
3071 -
Directory Listing
Modified
Wed Jul 21 05:37:30 2010 UTC
(11 years, 10 months ago)
by
gross
Original Path:
trunk
new darcy flux
Revision
3070 -
Directory Listing
Modified
Wed Jul 21 04:09:58 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixord
Revision
3069 -
Directory Listing
Modified
Wed Jul 21 03:24:48 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Updates to layer cake and cookbook as well as examples.
Revision
3068 -
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Modified
Mon Jul 19 00:43:31 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Missing Figures
Revision
3067 -
Directory Listing
Modified
Mon Jul 19 00:40:37 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Cookbook Updates - Chapter 9 - New figures.
Revision
3066 -
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Modified
Sun Jul 18 23:32:07 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Missing Picture causing errors.
Revision
3065 -
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Modified
Thu Jul 15 02:59:27 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Updates to newer examples.
Revision
3064 -
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Modified
Thu Jul 15 02:58:23 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook with fixed images and new chaper for 3d seismic model. New chapter is now added.
Revision
3063 -
Directory Listing
Modified
Thu Jul 15 02:57:46 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook with fixed images and new chaper for 3d seismic model.
Revision
3062 -
Directory Listing
Modified
Wed Jul 14 00:18:30 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Joels suggested changes for naming conventions. The function is now located in esys.pycad.extras as layer_cake.
Revision
3061 -
Directory Listing
Modified
Tue Jul 13 23:34:10 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
function LayerCake fixed is now under esys.pycad.layer_cake
Revision
3060 -
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Modified
Tue Jul 13 00:55:09 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Adding layer cake builder to pycad
Revision
3059 -
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Modified
Tue Jul 6 03:31:48 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fix error message in launcher. Allow non-data objects to be passed to condEval
Revision
3056 -
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Modified
Mon Jul 5 00:07:16 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Have the escript launcher check the PBS_NODEFILE variable for hosts.
Revision
3055 -
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Modified
Sun Jul 4 21:52:36 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
3d wave equation and ABC
Revision
3054 -
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Modified
Wed Jun 30 02:22:25 2010 UTC
(11 years, 10 months ago)
by
ahallam
Original Path:
trunk
Missing Figures...
Revision
3053 -
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Modified
Tue Jun 29 01:31:31 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixes to deal with new savanna configuration.
Blocking out missing images.
Revision
3052 -
Directory Listing
Modified
Tue Jun 29 00:57:45 2010 UTC
(11 years, 10 months ago)
by
lgao
Original Path:
trunk
Revert the commit of this options file made by my last commit for Gauss-Seidel.
Revision
3051 -
Directory Listing
Modified
Tue Jun 29 00:45:49 2010 UTC
(11 years, 10 months ago)
by
lgao
Original Path:
trunk
Hybrid MPI/OpenMP versioned Gauss_Seidel preconditioner is added.
To use it, use "SolverOptions.GAUSS_SEIDEL_MPI" in python script.
Revision
3050 -
Directory Listing
Modified
Sun Jun 27 22:54:12 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Visual studio 2008 (v9.0) with Microsoft MPI libraries.
Courtesy of Gordon German.
Revision
3047 -
Directory Listing
Modified
Thu Jun 24 00:33:05 2010 UTC
(11 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Adding user name to tmpfiles.
Changing name of cluster options file to savanna from service0
Revision
3046 -
Directory Listing
Modified
Tue Jun 22 08:01:55 2010 UTC
(11 years, 10 months ago)
by
gross
Original Path:
trunk
some examples for a simple subduction model
Revision
3045 -
Directory Listing
Modified
Fri Jun 18 06:38:18 2010 UTC
(11 years, 11 months ago)
by
lgao
Original Path:
trunk
Enable MKL and Lapack (the unit test problem has been fixed after Artak's commit).
Revision
3044 -
Directory Listing
Modified
Fri Jun 18 04:48:47 2010 UTC
(11 years, 11 months ago)
by
artak
Original Path:
trunk
Put back
Revision
3043 -
Directory Listing
Modified
Fri Jun 18 04:45:14 2010 UTC
(11 years, 11 months ago)
by
artak
Original Path:
trunk
Problem with latest MKL should be fixed now. The problem was solving unrolled block matrix with MKL.
Revision
3042 -
Directory Listing
Modified
Fri Jun 18 04:01:43 2010 UTC
(11 years, 11 months ago)
by
lgao
Original Path:
trunk
Disable Lapack to disable MKL.
Revision
3041 -
Directory Listing
Modified
Fri Jun 18 04:01:40 2010 UTC
(11 years, 11 months ago)
by
artak
Original Path:
trunk
Should be faster with openmp. Some ROW-COL conversion.
Revision
3040 -
Directory Listing
Modified
Fri Jun 18 03:05:17 2010 UTC
(11 years, 11 months ago)
by
lgao
Original Path:
trunk
Using lastest MKL library and set "usemkl=no" before the
problem with MKL in unit tests is solved ("maximum number
of iteration step reached" for test_***_AMG_System).
Revision
3039 -
Directory Listing
Modified
Tue Jun 15 07:21:56 2010 UTC
(11 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fix the NetCDF 4.1 issue (hopefully) - MPICH and IntelMPI have the required
definition.
Revision
3038 -
Directory Listing
Modified
Tue Jun 15 07:08:46 2010 UTC
(11 years, 11 months ago)
by
lgao
Original Path:
trunk
Update the path to Intel-mpi 4.0.0.027
Revision
3037 -
Directory Listing
Modified
Mon Jun 14 00:59:30 2010 UTC
(11 years, 11 months ago)
by
caltinay
Original Path:
trunk
Renamed escriptexport to weipa. Fixes #475.
Revision
3036 -
Directory Listing
Modified
Mon Jun 14 00:13:18 2010 UTC
(11 years, 11 months ago)
by
caltinay
Original Path:
trunk
Fixed compilation with MPI and NetCDF 4.1. Removed obsolete options file.
Revision
3035 -
Directory Listing
Modified
Thu Jun 10 01:48:41 2010 UTC
(11 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Lazy node support for conditional evaluation.
It should be a complete operation now.
Revision
3034 -
Directory Listing
Modified
Wed Jun 9 03:24:23 2010 UTC
(11 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Adding unit tests for condEval
Revision
3033 -
Directory Listing
Modified
Wed Jun 2 10:17:00 2010 UTC
(11 years, 11 months ago)
by
gross
Original Path:
trunk
fix for overflow
Revision
3032 -
Directory Listing
Modified
Mon May 31 02:58:15 2010 UTC
(11 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Add work around for windows not liking chained X::Y::Z.
TestDomain now supports tags and getX.
This is to allow testing for some features without invoking finley
Revision
3031 -
Directory Listing
Modified
Thu May 27 04:04:33 2010 UTC
(11 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Adding condEval function to Data.
Unit tests and a different name to follow.
Revision
3030 -
Directory Listing
Modified
Fri May 21 05:25:20 2010 UTC
(12 years ago)
by
lgao
Original Path:
trunk
Update savanna_options file to use the correct silo module.
Revision
3029 -
Directory Listing
Modified
Fri May 21 02:01:37 2010 UTC
(12 years ago)
by
ahallam
Original Path:
trunk
small updates and work on seismic code
Revision
3028 -
Directory Listing
Modified
Thu May 13 03:41:27 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
a new test problem (doesn't use unit testing)
Revision
3027 -
Directory Listing
Modified
Wed May 12 05:26:09 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
some little fixes in an old script
Revision
3026 -
Directory Listing
Modified
Mon May 10 06:23:49 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
some fix for omp
Revision
3025 -
Directory Listing
Modified
Thu May 6 01:20:46 2010 UTC
(12 years ago)
by
ahallam
Original Path:
trunk
Updates to wave equation examples. Pressure wave examples should be completed now. Working on seismic wave examples. Cookbook chapter for pressure wave examples also added.
Revision
3024 -
Directory Listing
Modified
Wed May 5 01:12:32 2010 UTC
(12 years ago)
by
jfenwick
Original Path:
trunk
Some savanna fixes but not complete
Revision
3023 -
Directory Listing
Modified
Wed May 5 01:00:16 2010 UTC
(12 years ago)
by
lgao
Original Path:
trunk
Option file update for machine "sunzi".
Revision
3021 -
Directory Listing
Modified
Tue May 4 10:14:12 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
MPI problem fixed.
Revision
3020 -
Directory Listing
Modified
Tue May 4 09:10:03 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
reactive solver added
Revision
3019 -
Directory Listing
Modified
Fri Apr 30 06:10:37 2010 UTC
(12 years ago)
by
jfenwick
Original Path:
trunk
adding Lin options
Revision
3018 -
Directory Listing
Modified
Thu Apr 29 21:35:24 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
some stupid lines removed
Revision
3017 -
Directory Listing
Modified
Thu Apr 29 03:40:12 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
Some AMLI for systems fixes
Revision
3016 -
Directory Listing
Modified
Wed Apr 28 05:28:44 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
firstprivate added for OpenMP
Revision
3015 -
Directory Listing
Modified
Wed Apr 28 05:06:26 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
OpenMP commented out for now
Revision
3014 -
Directory Listing
Modified
Wed Apr 28 04:05:21 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
a more stable handling of divergence in the CN or BE
Revision
3013 -
Directory Listing
Modified
Wed Apr 28 03:47:51 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
Block separation part commented out for AMG preconditioner
Revision
3012 -
Directory Listing
Modified
Wed Apr 28 03:39:22 2010 UTC
(12 years ago)
by
lgao
Original Path:
trunk
Fix the MPI compilation bug.
Revision
3011 -
Directory Listing
Modified
Wed Apr 28 02:21:23 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
New method added for unrolling System matrix. Direct solver now uses unrolled copy of the AMG matrix.
Revision
3010 -
Directory Listing
Modified
Tue Apr 27 05:10:46 2010 UTC
(12 years ago)
by
artak
Original Path:
trunk
Preparation for AMG on Systems without cut using frobenius norm
Revision
3009 -
Directory Listing
Modified
Thu Apr 22 11:17:42 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
another MPI problem fixed
Revision
3008 -
Directory Listing
Modified
Thu Apr 22 10:19:20 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
MPI problem fixed
Revision
3007 -
Directory Listing
Modified
Thu Apr 22 09:08:36 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
typo for MPI cse fixed
Revision
3006 -
Directory Listing
Modified
Thu Apr 22 08:31:28 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
local_norm_w removed
Revision
3005 -
Directory Listing
Modified
Thu Apr 22 05:59:31 2010 UTC
(12 years ago)
by
gross
Original Path:
trunk
early call of setPreconditioner in FCT solver removed.
Revision
3004 -
Directory Listing
Modified
Wed Apr 14 05:27:30 2010 UTC
(12 years, 1 month ago)
by
ahallam
Original Path:
trunk
Sampling theorem, stability requirements, Laplacian discussion, Pressure wave PDE
Revision
3003 -
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Modified
Wed Apr 7 02:29:57 2010 UTC
(12 years, 1 month ago)
by
ahallam
Original Path:
trunk
Pressure wave working, accelleration example, new entries to cookbook for example 7.
Revision
3002 -
Directory Listing
Modified
Wed Apr 7 02:25:45 2010 UTC
(12 years, 1 month ago)
by
gross
Original Path:
trunk
gmsh now supports the Mesh.SubdivisionAlgorithm and Mesh.Algorithm3D option.
The Mesh.Algorithm, Mesh.Smoothing, Mesh.Optimization options are now set in the
.geo file rather than in the command line.
Revision
3001 -
Directory Listing
Modified
Wed Mar 31 04:29:10 2010 UTC
(12 years, 1 month ago)
by
ahallam
Original Path:
trunk
Pressue wave problem, looking at sampling theorem, and Crank-Nicolson
Revision
3000 -
Directory Listing
Modified
Tue Mar 30 03:10:13 2010 UTC
(12 years, 1 month ago)
by
lgao
Original Path:
trunk
Gauss_Seidel preconditioner is now SPD.
Revision
2999 -
Directory Listing
Modified
Fri Mar 26 00:00:39 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
NE set to 10 elemennt, because 6 is too small for mpi=8 job.
Revision
2998 -
Directory Listing
Modified
Wed Mar 24 04:00:20 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
More openMP corrections
Revision
2997 -
Directory Listing
Modified
Wed Mar 24 01:46:33 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
Some openMP corrections
Revision
2996 -
Directory Listing
Modified
Tue Mar 23 06:24:09 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
Tests are added for GAUSS_SEIDEL
Revision
2995 -
Directory Listing
Modified
Tue Mar 23 06:14:26 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
AMG levels maximum set 5
Revision
2994 -
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Modified
Tue Mar 23 06:13:14 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
AMG levels maximum set 5
Revision
2993 -
Directory Listing
Modified
Tue Mar 23 04:29:30 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
Some optimization on GAUSS_SEIDEL sweeps.
Revision
2992 -
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Modified
Tue Mar 23 04:16:28 2010 UTC
(12 years, 1 month ago)
by
artak
Original Path:
trunk
Sweeps bug is fixed and some more comments added about how sweeps computed
Revision
2991 -
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Modified
Mon Mar 22 05:42:48 2010 UTC
(12 years, 1 month ago)
by
gross
Original Path:
trunk
isub as private added
Revision
2990 -
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Modified
Fri Mar 19 05:57:22 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
some prints removed.
Revision
2989 -
Directory Listing
Modified
Thu Mar 18 01:45:55 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
- bug in error handling in the case of lumped mass matrix fixed.
- switched back to rowsum lumping as there are problems with HRZ lumping for order 2
Revision
2988 -
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Modified
Tue Mar 16 06:14:30 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
C-level lumping switched on
Revision
2987 -
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Modified
Tue Mar 16 01:32:43 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
FCT solver rewritten
Revision
2982 -
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Modified
Wed Mar 10 04:27:47 2010 UTC
(12 years, 2 months ago)
by
caltinay
Original Path:
trunk
Some minor corrections to the cookbook (mainly word repetitions and typos).
Revision
2980 -
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Modified
Tue Mar 9 03:50:58 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
minor change to fix latest bug
Revision
2979 -
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Modified
Tue Mar 9 02:54:32 2010 UTC
(12 years, 2 months ago)
by
ahallam
Original Path:
trunk
cookbook review final final 3.1 - artak and tony corrections
Revision
2978 -
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Modified
Tue Mar 9 02:11:07 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
minor
Revision
2977 -
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Modified
Tue Mar 9 00:33:28 2010 UTC
(12 years, 2 months ago)
by
ahallam
Original Path:
trunk
cookbook review final 3.1
Revision
2976 -
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Modified
Mon Mar 8 01:18:33 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
Lame equation is corrected. Options for using smoother in AMG is added. A book on AMG is cited for standard coarsening.
Revision
2975 -
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Modified
Thu Mar 4 05:44:12 2010 UTC
(12 years, 2 months ago)
by
ahallam
Original Path:
trunk
Cookbook modifications Review -> Not quite finished yet.
New figure.
Revision
2974 -
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Modified
Thu Mar 4 03:09:35 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
forgot to skip example06.py as well
Revision
2973 -
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Modified
Thu Mar 4 03:07:22 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
example05c.py is not tested if matplotlib library version is too old, where quiver() does not support angle parameter.
Revision
2972 -
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Modified
Thu Mar 4 01:33:38 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
DONE. Einstain Summation Convention (ESC, what an irony, reminds me ESC button) is removed from cookbook as it is not used anywhere in the cookbook.
Revision
2971 -
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Modified
Wed Mar 3 23:19:00 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
I hate voodoo.
Putting pdfinfo directive in two places in the cookbook header so that
both versions of evince get the right title.
Revision
2970 -
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Modified
Wed Mar 3 05:23:50 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix out of date comment
Revision
2969 -
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Modified
Wed Mar 3 04:27:00 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
reached Chapter 4
Revision
2968 -
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Modified
Wed Mar 3 04:02:30 2010 UTC
(12 years, 2 months ago)
by
caltinay
Original Path:
trunk
Updated service0 & shake75 options to use cxx_extra
Revision
2967 -
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Modified
Wed Mar 3 03:50:46 2010 UTC
(12 years, 2 months ago)
by
caltinay
Original Path:
trunk
scons now understands cc_extra and cxx_extra. The former applies only to the
C compiler, the latter to the C++ compiler which fixes #510.
Revision
2966 -
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Modified
Wed Mar 3 03:19:39 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fixing non-ansi compliant code
Revision
2965 -
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Modified
Wed Mar 3 01:53:41 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Added MPI aware MIS
Revision
2964 -
Directory Listing
Modified
Wed Mar 3 01:21:09 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
up to Chapter 3
Revision
2963 -
Directory Listing
Modified
Wed Mar 3 01:10:11 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
up to section 2.1.9
Revision
2962 -
Directory Listing
Modified
Wed Mar 3 01:03:56 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
bar as unit added
Revision
2961 -
Directory Listing
Modified
Wed Mar 3 00:56:59 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Hacking cookbook
Revision
2960 -
Directory Listing
Modified
Tue Mar 2 07:54:11 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
new DarcyFlux solver
Revision
2959 -
Directory Listing
Modified
Tue Mar 2 06:27:17 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
more corrections on exmaple 1, up to section 2.1.5
Revision
2958 -
Directory Listing
Modified
Tue Mar 2 06:00:39 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
more corrections on exmaple 1, up to section 2.1.5
Revision
2957 -
Directory Listing
Modified
Tue Mar 2 01:28:19 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
more corrections
Revision
2956 -
Directory Listing
Modified
Mon Mar 1 01:31:59 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
First corrections: NEEDS MORE AND MORE...
Revision
2955 -
Directory Listing
Modified
Mon Mar 1 00:54:37 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix hackscore error
Revision
2954 -
Directory Listing
Modified
Fri Feb 26 06:09:47 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
bug introduced by a smart programmer to the Locator has been fixed?
Revision
2953 -
Directory Listing
Modified
Thu Feb 25 10:00:23 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
final touch to the naming in the cookbook
Revision
2952 -
Directory Listing
Modified
Thu Feb 25 09:52:10 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
even more renaming in the cookbook
Revision
2951 -
Directory Listing
Modified
Thu Feb 25 07:43:40 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
more renaming in the cookbook
Revision
2950 -
Directory Listing
Modified
Thu Feb 25 07:33:16 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
more renames in the cookbook.
Revision
2949 -
Directory Listing
Modified
Thu Feb 25 05:23:11 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
renaming examples part 1
Revision
2948 -
Directory Listing
Modified
Thu Feb 25 04:54:30 2010 UTC
(12 years, 2 months ago)
by
gross
Original Path:
trunk
a new almost completed version of the cookbook
Revision
2944 -
Directory Listing
Modified
Tue Feb 23 23:51:20 2010 UTC
(12 years, 2 months ago)
by
jfenwick
Original Path:
trunk
Fix latex markup in pdf title.
It turns out \pdfinfo must come after \maketitle if you don't want the
latex version of the title.
This behaviour does not happen in evince 2.22.2 (standard in lenny) but does
happen in more recent versions.
Revision
2943 -
Directory Listing
Modified
Tue Feb 23 01:49:27 2010 UTC
(12 years, 2 months ago)
by
artak
Original Path:
trunk
VTK as a required package is removed from cookbook
Revision
2942 -
Directory Listing
Modified
Mon Feb 22 05:43:44 2010 UTC
(12 years, 2 months ago)
by
caltinay
Original Path:
trunk
Fixed a small typo in the cookbook abstract.
Revision
2941 -
Directory Listing
Modified
Mon Feb 22 05:17:43 2010 UTC
(12 years, 2 months ago)
by
caltinay
Original Path:
trunk
saveESD now doesn't store the absolute path to the files in the ESD file so
the whole dataset can be moved easily.
Revision
2940 -
Directory Listing
Modified
Fri Feb 19 00:38:45 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Minor potential optimization: prefer empty() over size()==0.
Revision
2939 -
Directory Listing
Modified
Thu Feb 18 04:16:59 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
some print statements removed.
Revision
2938 -
Directory Listing
Modified
Thu Feb 18 00:24:35 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
saveESD: Add a warning about the experimental status of ESD.
Save the ESD file within the data directory.
Revision
2937 -
Directory Listing
Modified
Tue Feb 16 00:01:52 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Corrected an MPI datatype
Revision
2936 -
Directory Listing
Modified
Mon Feb 15 03:29:53 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
some clarification added.
Revision
2935 -
Directory Listing
Modified
Mon Feb 15 03:15:59 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
pycad support 3D transfinite meshing now.
Revision
2934 -
Directory Listing
Modified
Fri Feb 12 05:09:06 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
gmsh reader supports second order recs and hex now
Revision
2933 -
Directory Listing
Modified
Tue Feb 9 03:27:37 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
test for positivity of initial solution in transport solver has been switched on again
Revision
2932 -
Directory Listing
Modified
Mon Feb 8 06:48:19 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
printfs removed.
Revision
2931 -
Directory Listing
Modified
Mon Feb 8 06:45:41 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
more changes on the cookbook
Revision
2930 -
Directory Listing
Modified
Mon Feb 8 06:25:43 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
escriptconvert can now convert both to Silo and VTK and is thus built by
default
Revision
2929 -
Directory Listing
Modified
Mon Feb 8 05:13:27 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Implemented mantis issue 464 in dataexporter: better resolution for Tri6 and
Tet10 elements via point-in-triangle and point-in-tetrahedron tests.
Revision
2926 -
Directory Listing
Modified
Thu Feb 4 23:13:53 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Attempting to fix a problem with windows linking in the ironically named INKNOWWHATIMDOING section
Revision
2925 -
Directory Listing
Modified
Thu Feb 4 23:12:34 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Update savanna to build c99 style
Revision
2923 -
Directory Listing
Modified
Thu Feb 4 04:05:36 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Bringing non-release specific things from stage3.1 r2922 back to trunk
Revision
2919 -
Directory Listing
Modified
Thu Feb 4 00:53:58 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Took over Macro element handling from finley.saveVTK.
Revision
2918 -
Directory Listing
Modified
Thu Feb 4 00:53:37 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Quick fix for Windows scons problem due to the same files being compiled twice
in the same directory. Visit plugin is not for Windows anyway so disabled it
there.
Revision
2917 -
Directory Listing
Modified
Wed Feb 3 06:19:50 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fix for the fix ;-) The dataexporter is used in a context where HAVE_MPI is set
but mpi not initialised -> have to check for mpiSize.
Revision
2915 -
Directory Listing
Modified
Wed Feb 3 05:55:16 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
uninitialised variable error for non-mpi case fixed.
Revision
2914 -
Directory Listing
Modified
Wed Feb 3 05:38:12 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
missing import added.
Revision
2913 -
Directory Listing
Modified
Wed Feb 3 04:30:46 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
type fixed
Revision
2912 -
Directory Listing
Modified
Wed Feb 3 03:31:24 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
some missing functions
Revision
2911 -
Directory Listing
Modified
Wed Feb 3 03:30:40 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Changed name of launcher and rotated figure correctly.
Revision
2910 -
Directory Listing
Modified
Wed Feb 3 03:22:31 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added a libescriptreader.a target which does not depend on escript or finley
at runtime. This will be used for the VisIt plugin so is not built by default.
Revision
2907 -
Directory Listing
Modified
Wed Feb 3 01:39:15 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
needdirs replaced by mkDir from esys.escript
Revision
2906 -
Directory Listing
Modified
Tue Feb 2 05:26:03 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
some minor :-) fix.
Revision
2905 -
Directory Listing
Modified
Tue Feb 2 04:26:42 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
some missing files.
Revision
2904 -
Directory Listing
Modified
Tue Feb 2 04:21:52 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
more revision on cookbook: example 1 and 2 have been swapped.
Revision
2903 -
Directory Listing
Modified
Tue Feb 2 00:20:52 2010 UTC
(12 years, 3 months ago)
by
lgao
Original Path:
trunk
Switch to MKL 10.2.2.025 on service0.
Revision
2902 -
Directory Listing
Modified
Mon Feb 1 23:53:16 2010 UTC
(12 years, 3 months ago)
by
lgao
Original Path:
trunk
Switch to Parmetis 3.1.1 on service0.
Revision
2900 -
Directory Listing
Modified
Mon Feb 1 06:05:38 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Switch to Silo 4.7.2 on service0 (bug fix release).
Revision
2899 -
Directory Listing
Modified
Mon Feb 1 01:55:53 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added missing declspec to FileSavers.
Revision
2898 -
Directory Listing
Modified
Mon Feb 1 01:23:46 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Reverted the move of system_dep.h since it didn't solve the problem nicely.
Created a wrapper class for the needed functionality instead.
Revision
2897 -
Directory Listing
Modified
Mon Feb 1 01:22:50 2010 UTC
(12 years, 3 months ago)
by
lgao
Original Path:
trunk
Fix the Parmetis problem related with Mantis issue 0000480.
In case there is any node with no vertex, Parmetis will not
be used and a message will be printed.
Revision
2896 -
Directory Listing
Modified
Sun Jan 31 22:17:22 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Added missing extern C for finley include.
Revision
2895 -
Directory Listing
Modified
Fri Jan 29 04:58:16 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Moved finley's system_dep.h file up to the C level to be able to export two
functions that are used by the dataexporter. Changed include paths and C++
style comments accordingly.
Revision
2893 -
Directory Listing
Modified
Fri Jan 29 03:41:33 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Link to esysUtils to be able to use escript exceptions.
Revision
2891 -
Directory Listing
Modified
Fri Jan 29 00:26:07 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fix for ambiguous call to sqrt...
Revision
2890 -
Directory Listing
Modified
Fri Jan 29 00:22:39 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Oh, apparently a 'defect in the standard' and VC++ didn't like it. Hopefully,
this should fix it.
Revision
2888 -
Directory Listing
Modified
Fri Jan 29 00:07:00 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Looks like netcdf.hh doesn't exist on Windows so changed to netcdfcpp.h.
Revision
2887 -
Directory Listing
Modified
Thu Jan 28 05:49:09 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixed a compile issue with MPI.
Revision
2886 -
Directory Listing
Modified
Thu Jan 28 05:39:23 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
New version of saveVTK within dataexporter. Not pythonised yet since it needs
more testing and release 3.1 will not ship dataexporter.
Revision
2884 -
Directory Listing
Modified
Thu Jan 28 05:00:59 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Updated various nan checks to consider the windows _isnan
The default compiler flags have changed as well.
+ intel will now take -std=c99 instead of -ansi
+ gcc has -ansi removed which means it defaults to gnu99
We could have set gcc to -std=c99 as well but that gives a
warning on g++ which gets converted into an error by our
pedantic warning.
Rationale:
We need something more than ansi to get proper nan handling.
- We currently don't have any code which does not comply with ansi
but the nan checks don't work.
Impact:
If we want our code to still be able to compile on older compilers
(at reduced functionality) we need to be careful not to introduce other
c99-isms.
If we don't care, then it's time for some celebratory // comments.
Revision
2883 -
Directory Listing
Modified
Thu Jan 28 02:28:27 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Switch to gcc 4.4 on guineapig
Revision
2882 -
Directory Listing
Modified
Thu Jan 28 02:27:49 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Scons now allows to specify which C & C++ compiler to use via cc and cxx
variables. Fixes mantis # 485.
Revision
2881 -
Directory Listing
Modified
Thu Jan 28 02:03:15 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Don't panic.
Updating copyright stamps
Revision
2880 -
Directory Listing
Modified
Thu Jan 28 01:21:30 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Better resolution for Hex27 & Rec9 data in dataexporter (mantis #486).
Saved Silo data resolution is now equal to finley.SaveVTK generated data in
all cases.
Revision
2879 -
Directory Listing
Modified
Thu Jan 28 01:00:26 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Move definition of build_platform on t.poulet suggestion.
Redefine the IS_NAN macro to replace versions commented as
'This does not work'
If you are not compiling with a c99 compliant compiler you will not
recognise nulls but this seems to be the best we can do right now
without checking for explicit bit patterns.
Revision
2878 -
Directory Listing
Modified
Thu Jan 28 00:59:30 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
more work on cookbook review
Revision
2877 -
Directory Listing
Modified
Thu Jan 28 00:28:45 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fixes to Silo writer: Multivars for tensors are now correct even with empty
ranks.
Revision
2875 -
Directory Listing
Modified
Wed Jan 27 04:09:24 2010 UTC
(12 years, 3 months ago)
by
jfenwick
Original Path:
trunk
Updated version string to something which won't keep changing
Revision
2873 -
Directory Listing
Modified
Wed Jan 27 01:09:33 2010 UTC
(12 years, 3 months ago)
by
caltinay
Original Path:
trunk
Fix for mantis #480 when parmetis is off.
Revision
2872 -
Directory Listing
Modified
Wed Jan 27 00:59:58 2010 UTC
(12 years, 3 months ago)
by
artak
Original Path:
trunk
/home/ changed to /Users/ for mac
Revision
2870 -
Directory Listing
Modified
Mon Jan 25 08:34:15 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
more review on the cookbook.
Revision
2869 -
Directory Listing
Modified
Mon Jan 25 05:11:28 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
back to the old version. The last checkin was a mistake.
Revision
2868 -
Directory Listing
Modified
Mon Jan 25 04:44:45 2010 UTC
(12 years, 3 months ago)
by
artak
Original Path:
trunk
Some fixes for 3.1 release. Notes about Snow Leopard is added and installing from ports removed.
Revision
2867 -
Directory Listing
Modified
Fri Jan 22 06:28:02 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
now option -i is used if no script is given
Revision
2866 -
Directory Listing
Modified
Fri Jan 22 05:38:56 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
small fix for the case n=1 under mpi
Revision
2865 -
Directory Listing
Modified
Fri Jan 22 03:19:32 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
launcher for MPI supports now -i option (see mantis 361)
Revision
2864 -
Directory Listing
Modified
Fri Jan 22 03:09:55 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
projector added to users guide
Revision
2863 -
Directory Listing
Modified
Thu Jan 21 07:18:37 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
fix for mantis 454
Revision
2862 -
Directory Listing
Modified
Thu Jan 21 04:45:39 2010 UTC
(12 years, 3 months ago)
by
gross
Original Path:
trunk
more review in the cookbook
Revision
2861 -
Directory Listing
Modified
Wed Jan 20 02:47:42 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
some modification to the cookbook
Revision
2860 -
Directory Listing
Modified
Tue Jan 19 05:25:39 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
prints removed.
Revision
2859 -
Directory Listing
Modified
Tue Jan 19 05:21:50 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
a work around for gcc 4.4 added.
Revision
2858 -
Directory Listing
Modified
Tue Jan 19 01:07:52 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
small fixes with the reduced solution for the transport problem
Revision
2857 -
Directory Listing
Modified
Mon Jan 18 07:44:42 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
test for ApproximationOrder added and Transport type problem now choose reduced when necessary only.
Revision
2856 -
Directory Listing
Modified
Mon Jan 18 04:14:37 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
FunctionSpaces provide now some information about their approximation order.
Revision
2855 -
Directory Listing
Modified
Mon Jan 18 03:39:29 2010 UTC
(12 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Fixed
Revision
2854 -
Directory Listing
Modified
Mon Jan 18 01:54:04 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Fixed a compile error and removed unneeded member.
Revision
2853 -
Directory Listing
Modified
Mon Jan 18 01:46:05 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Do not attempt to read node file data if #nodes=0.
Revision
2852 -
Directory Listing
Modified
Mon Jan 18 00:22:23 2010 UTC
(12 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Fix MPI issue in toString.
Fixes unit tet failure in myfistrscript.py
Revision
2851 -
Directory Listing
Modified
Fri Jan 15 07:37:47 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
typos fixed.
Revision
2850 -
Directory Listing
Modified
Fri Jan 15 07:14:25 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
the powerlaw is working again. tests are switched on again.
Revision
2849 -
Directory Listing
Modified
Fri Jan 15 03:45:52 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Oops...
Revision
2848 -
Directory Listing
Modified
Fri Jan 15 03:44:44 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Removed unneeded member and initialised some others in the constructor.
Revision
2847 -
Directory Listing
Modified
Fri Jan 15 03:35:05 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Improved error handling when using MPI and fixed Silo output when not all
ranks contribute to a data variable.
Revision
2846 -
Directory Listing
Modified
Fri Jan 15 03:16:08 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
removeGhostNodes is broken and unnecessary anyway so removed.
Revision
2845 -
Directory Listing
Modified
Fri Jan 15 03:10:42 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
escriptconvert passes MPI communicator to EscriptDataset now so files are
read/written in parallel.
Revision
2844 -
Directory Listing
Modified
Fri Jan 15 00:23:39 2010 UTC
(12 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Fixed some options to deal with silo errors.
Revision
2843 -
Directory Listing
Modified
Thu Jan 14 05:51:28 2010 UTC
(12 years, 4 months ago)
by
gross
Original Path:
trunk
new compressible solver
Revision
2842 -
Directory Listing
Modified
Thu Jan 14 05:42:02 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Changed domain::dump() to write out NodeDistribution & DofDistribution even if
the current process has 0 nodes.
Revision
2841 -
Directory Listing
Modified
Thu Jan 14 01:02:56 2010 UTC
(12 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Unit tests for 2838 and adding setTags variant which takes a string instead of a tag num.
Revision
2840 -
Directory Listing
Modified
Thu Jan 14 01:00:15 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Enabled Silo on guineapig
Revision
2839 -
Directory Listing
Modified
Wed Jan 13 23:34:49 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
minor compiliation problem under MKL is fixed.
Revision
2838 -
Directory Listing
Modified
Wed Jan 13 06:01:03 2010 UTC
(12 years, 4 months ago)
by
jfenwick
Original Path:
trunk
Vector, Tensor, Tensor3, Tensor4 can now take a (nested) sequence for
their initial value.
Revision
2837 -
Directory Listing
Modified
Wed Jan 13 01:28:23 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Added missing import statement.
Revision
2836 -
Directory Listing
Modified
Mon Jan 11 01:41:29 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
minor adjustments
Revision
2835 -
Directory Listing
Modified
Mon Jan 11 01:23:52 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
Default smoother set to Gauss-Seidel. This one more robust than jacobi, but jacobi is faster.
Revision
2834 -
Directory Listing
Modified
Thu Jan 7 06:06:56 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
Reduced elements are now handled separate from the main elements within the
data exporter. This simplifies usage considerably.
Revision
2833 -
Directory Listing
Modified
Thu Jan 7 05:44:46 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
minor openmp fix
Revision
2832 -
Directory Listing
Modified
Thu Jan 7 05:16:50 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
minor
Revision
2831 -
Directory Listing
Modified
Thu Jan 7 05:08:19 2010 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
Splitting can be read from file. This is useful for testing.
Revision
2830 -
Directory Listing
Modified
Thu Jan 7 04:49:55 2010 UTC
(12 years, 4 months ago)
by
caltinay
Original Path:
trunk
saveSilo now passes MPI communicator to data exporter.
Revision
2829 -
Directory Listing
Modified
Wed Jan 6 02:51:31 2010 UTC
(12 years, 4 months ago)
by
ahallam
Original Path:
trunk
minor updates to cookbook
Revision
2828 -
Directory Listing
Modified
Tue Dec 22 01:24:40 2009 UTC
(12 years, 4 months ago)
by
artak
Original Path:
trunk
Smoother for AMG now can be selected from python. Now only Jacobi and Gauss-Seidel are available as smoothers.
Revision
2827 -
Directory Listing
Modified
Fri Dec 18 03:41:09 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
There is now a mechanism to pass a C function into escript and invoke it on each datapoint with:
applyBinaryCFunction
Warning in order to use this function your escript must be compiled with
scons ... iknowwhatimdoing=yes
---------------------
Because this code relies on casts that the C standard does not allow some code has been moved into Dodgy{.h .cpp}
Scons files have been modified to treat these files specially [Warnings are not errors for these files.]
Revision
2826 -
Directory Listing
Modified
Fri Dec 18 01:33:35 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
MINRES anf TFQMR add initioal guess. Tolerance for both solvers changed. However tolerance computaion needs to be more involved than it is now to avoid unnecessary very small tolerances.
Revision
2825 -
Directory Listing
Modified
Thu Dec 17 00:10:06 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
More fixes to resolveGroup
Revision
2824 -
Directory Listing
Modified
Wed Dec 16 01:22:56 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
ResolveGroup fixed so it actually resolves groups.
Children, when you iterate backwards remember its i>=0 not i>0
Revision
2822 -
Directory Listing
Modified
Mon Dec 14 03:10:16 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
dataexporter: Ensure that NetCDF files created using N ranks are only loaded
when mpi size equals N or 1.
Revision
2821 -
Directory Listing
Modified
Fri Dec 11 07:00:35 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
EscriptDataset takes an optional communicator now.
Revision
2820 -
Directory Listing
Modified
Thu Dec 10 05:03:11 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Paso Testing tools now can select coarseing.The builld_PasoTests target is also added to scons.
Revision
2819 -
Directory Listing
Modified
Thu Dec 10 04:12:35 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added include to make badger happy. Hope everyone's happy now.
Revision
2818 -
Directory Listing
Modified
Thu Dec 10 04:10:16 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
dataexporter links against escript now to make the Mac happy.
Revision
2817 -
Directory Listing
Modified
Thu Dec 10 02:12:33 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
test is added for selecting standard coarsening.
Revision
2816 -
Directory Listing
Modified
Thu Dec 10 02:09:43 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Standard coarsening is added to options list.
Revision
2815 -
Directory Listing
Modified
Tue Dec 8 08:15:19 2009 UTC
(12 years, 5 months ago)
by
gross
Original Path:
trunk
this fixes a problem of element distribution attribute for lines
Revision
2814 -
Directory Listing
Modified
Tue Dec 8 01:50:29 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Removed minor code duplication.
Revision
2813 -
Directory Listing
Modified
Tue Dec 8 00:30:13 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added missing include.
Revision
2812 -
Directory Listing
Modified
Tue Dec 8 00:12:07 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Implemented saveSilo within a new dataexporter module. If Silo is not available
at compile time the function throws. Ultimately, saveVTK will be moved here as
well.
Revision
2811 -
Directory Listing
Modified
Mon Dec 7 05:57:16 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed compilation when silo is not used.
Revision
2810 -
Directory Listing
Modified
Mon Dec 7 04:13:49 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Reincarnation of the escriptreader as a more flexible escriptexport library:
- can be initialised with instances of escript::Data and Finley_Mesh
- is now MPI aware at the EscriptDataset level including Silo writer
- now uses boost shared pointers
The lib is currently only used by the escriptconvert tool but this is going to
change...
Revision
2809 -
Directory Listing
Modified
Mon Dec 7 03:39:37 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
TestDomain now divides the total number of samples between ranks rather
than putting all samples on all ranks.
Revision
2808 -
Directory Listing
Modified
Mon Dec 7 00:26:45 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
default coarseneing is Ruge-Stueben.
Revision
2807 -
Directory Listing
Modified
Mon Dec 7 00:02:55 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Post and pre smoothing parameters are added for AMLI. Little bit reengineering according to Axelson's original AMLI paper.
Revision
2806 -
Directory Listing
Modified
Fri Dec 4 06:46:13 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
bin/escript:
- bail out early if buildvars is not around
- quote variables to avoid syntax errors
- some work towards POSIX compliance (s/==/=/ in string comparisons)
- escript -V was still spitting out 'pre2.0' -> changed to pre4.0
- fixed minor typos
Revision
2805 -
Directory Listing
Modified
Fri Dec 4 05:21:31 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
minor
Revision
2804 -
Directory Listing
Modified
Fri Dec 4 02:06:51 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Some memory and code optimizations in updateWeights method.
Revision
2803 -
Directory Listing
Modified
Thu Dec 3 05:35:20 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Parameters are added for post and pre smoothing. Now user can choose number of pre and post smoothing steps in AMG (e.g. setNumPreSweeps(5)).
Revision
2802 -
Directory Listing
Modified
Thu Dec 3 01:51:55 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
Aggressive coarsening is implemented. Removes more elements but adds more iteration steps.
Revision
2801 -
Directory Listing
Modified
Thu Dec 3 01:45:48 2009 UTC
(12 years, 5 months ago)
by
ahallam
Original Path:
trunk
Final updates to first 3 chapters of cookbook before moving on to linear elastic wave equation examples.
Revision
2800 -
Directory Listing
Modified
Thu Dec 3 01:45:12 2009 UTC
(12 years, 5 months ago)
by
ahallam
Original Path:
trunk
Getting rid of unneeded directories
Revision
2799 -
Directory Listing
Modified
Thu Dec 3 01:35:08 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
resolveGroup function added to python.
Unit tests for resolveGroup, resolve and delay.
Revision
2798 -
Directory Listing
Modified
Thu Dec 3 01:02:47 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Use system NetCDF on guineapig.
Revision
2797 -
Directory Listing
Modified
Wed Dec 2 23:30:21 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Changed NetCDF include path - this should enable netcdf on guineapig.
Revision
2796 -
Directory Listing
Modified
Wed Dec 2 05:02:43 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
null-commit to trigger buildbot
Revision
2795 -
Directory Listing
Modified
Wed Dec 2 02:39:23 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Removed node limit on lazy expressions.
The parameter LAZY_STR_FMT {0,1,2} controls how lazy expressions are printed.
0 gives default output
1 gives a tree form.
2 just prints depth
Revision
2794 -
Directory Listing
Modified
Wed Dec 2 00:43:17 2009 UTC
(12 years, 5 months ago)
by
gross
Original Path:
trunk
returning to the older version.
Revision
2793 -
Directory Listing
Modified
Tue Dec 1 06:10:10 2009 UTC
(12 years, 5 months ago)
by
gross
Original Path:
trunk
some new util functions
Revision
2792 -
Directory Listing
Modified
Tue Dec 1 05:02:18 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Oops.
matrixInverse now checks MPI to see if any other ranks raised exceptions.
Revision
2791 -
Directory Listing
Modified
Tue Dec 1 03:36:36 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Added expression depth to toString for LazyData.
Revision
2790 -
Directory Listing
Modified
Sun Nov 29 23:57:45 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fix scons file for unit tests.
Revision
2789 -
Directory Listing
Modified
Fri Nov 27 05:40:25 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Removed unused variable from OpenMP block.
Fixes compilation error with gcc 4.3.
Revision
2788 -
Directory Listing
Modified
Fri Nov 27 05:23:14 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Go back to version 10
Revision
2787 -
Directory Listing
Modified
Fri Nov 27 05:03:09 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Worked around icc11 problem in table interpolate.
Best guess is that a stackframe was getting mauled somehow.
Revision
2786 -
Directory Listing
Modified
Fri Nov 27 01:07:28 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed a little typo.
Revision
2785 -
Directory Listing
Modified
Thu Nov 26 05:17:40 2009 UTC
(12 years, 5 months ago)
by
lgao
Original Path:
trunk
Minor fix for unused variables
Revision
2784 -
Directory Listing
Modified
Thu Nov 26 05:09:14 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
More performance tunning. Sparsity check is added. If Coarse level matrix is denser than 1% then stop.
Revision
2783 -
Directory Listing
Modified
Thu Nov 26 05:07:33 2009 UTC
(12 years, 5 months ago)
by
lgao
Original Path:
trunk
process C_TensorBinaryOperation at the level of a whole sample rather than
each datapoint when an Expanded data is operating with a Constant data. This
could improve the efficiency of the non-lazy version escipt.
Revision
2782 -
Directory Listing
Modified
Thu Nov 26 04:42:29 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Added missing var declaration.
Revision
2781 -
Directory Listing
Modified
Thu Nov 26 04:12:11 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Some additional info from Thomas
Revision
2780 -
Directory Listing
Modified
Thu Nov 26 03:54:24 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Put the windows instructions back in.
Put more detail in the MPI hints.
Revision
2779 -
Directory Listing
Modified
Thu Nov 26 03:51:15 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed more instances of garbage=cstring+integer errors (d'oh!)
Revision
2778 -
Directory Listing
Modified
Thu Nov 26 01:50:30 2009 UTC
(12 years, 5 months ago)
by
caltinay
Original Path:
trunk
Fixed unintended pointer arithmetic with c-strings in MeshAdapter::dump() and
shortened error messages while being at it.
Revision
2777 -
Directory Listing
Modified
Thu Nov 26 01:06:00 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Added the LAZY_STACK_PROF #define for Lazy.
If enabled lazy will print the (roughly) maximum stack used by any openmp
thread over the course of this session.
Revision
2776 -
Directory Listing
Modified
Wed Nov 25 23:41:16 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Switching tests which read gmsh to not run under MPI
Revision
2775 -
Directory Listing
Modified
Wed Nov 25 05:01:43 2009 UTC
(12 years, 5 months ago)
by
ahallam
Original Path:
trunk
minor updates to cookbook; new python syntax highlighting
Revision
2774 -
Directory Listing
Modified
Wed Nov 25 04:24:03 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
#ifndef changed to #ifdef in makeNaN
Revision
2773 -
Directory Listing
Modified
Wed Nov 25 04:02:01 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Hadn't realised isnan was a macro.
Checking for it rather than FP_NAN
Revision
2772 -
Directory Listing
Modified
Wed Nov 25 02:02:50 2009 UTC
(12 years, 5 months ago)
by
ahallam
Original Path:
trunk
Fixed auto build error for heatrefraction_mesher002.py
Added clear figure line for run_heatrefraction.py process.
Revision
2771 -
Directory Listing
Modified
Wed Nov 25 01:38:49 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Fix
Revision
2770 -
Directory Listing
Modified
Wed Nov 25 01:24:51 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Removed buffer implementation of Lazy.
Removed supporting Alloc/Free Sample buffer calls.
Revision
2769 -
Directory Listing
Modified
Tue Nov 24 00:36:22 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Unit tests for NaN handling
Revision
2768 -
Directory Listing
Modified
Mon Nov 23 23:56:14 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
Dodge problem in NoPDE class
Revision
2767 -
Directory Listing
Modified
Mon Nov 23 06:00:37 2009 UTC
(12 years, 5 months ago)
by
artak
Original Path:
trunk
More openmp calls are added,escpecialy in arg_max method.
Revision
2766 -
Directory Listing
Modified
Mon Nov 23 05:10:53 2009 UTC
(12 years, 5 months ago)
by
jfenwick
Original Path:
trunk
inf, sup and Lsup now correctly handle +-infinity.
They also will return NaN if any part of their input is NaN.
This will break unit tests since it exposes the hidden bug (#447 in mantis)
This code relies on the ability to test for NaNs.
To do this it makes use of macros and functions from C99.
If you do not have a C99 compiler, then you will probably get the old behaviour.
That is, you won't know when you have NaNs.
Also did minor tweak to saveDataCSV doco.
Revision
2765 -
Directory Listing
Modified
Fri Nov 20 01:49:19 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
First steps toward efficiency. Coarsening process is improved. Some profiling tools are added.
Revision
2764 -
Directory Listing
Modified
Thu Nov 19 23:48:05 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
Some openMP calls are removed.
Revision
2763 -
Directory Listing
Modified
Thu Nov 19 06:28:03 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
Minor fix to my previous commit.
Revision
2762 -
Directory Listing
Modified
Thu Nov 19 06:24:44 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
fix the compilation problem I introduced for Non-MPI build due
to my last commit for Data::toString().
Revision
2761 -
Directory Listing
Modified
Thu Nov 19 06:11:07 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
AMLI preconditioner (previously called AMG)
Revision
2760 -
Directory Listing
Modified
Thu Nov 19 05:22:45 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
The first version of the new AMG preconditioner. It need a lot of polishing for efficiency. Old AMG now called AMLI preconditioner.
Revision
2759 -
Directory Listing
Modified
Thu Nov 19 05:19:47 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
methods needed for the new AMG preconditioner
Revision
2758 -
Directory Listing
Modified
Thu Nov 19 04:21:55 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Added missing imports. all_tests still fails though due to other problems.
Revision
2757 -
Directory Listing
Modified
Thu Nov 19 01:04:57 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
Solve the print statement problem for MPI program (matis issue 465).
Revision
2756 -
Directory Listing
Modified
Thu Nov 19 00:40:02 2009 UTC
(12 years, 6 months ago)
by
gross
Original Path:
trunk
missing file added.
Revision
2755 -
Directory Listing
Modified
Wed Nov 18 23:19:32 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Reverted changes to Mesh_read from last commit. They break compilation with
MPI and seem unintentional.
Revision
2754 -
Directory Listing
Modified
Wed Nov 18 07:44:26 2009 UTC
(12 years, 6 months ago)
by
gross
Original Path:
trunk
tests for macro elements in saveVTK added.
Revision
2753 -
Directory Listing
Modified
Wed Nov 18 06:06:50 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
fix bugs in minGlobalDataPoint() and maxGlobalDataPoint()
Revision
2752 -
Directory Listing
Modified
Wed Nov 18 06:01:18 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed compilation error in mesh reader when using MPI.
Revision
2751 -
Directory Listing
Modified
Wed Nov 18 00:30:47 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Removed stray forward declaration.
Revision
2750 -
Directory Listing
Modified
Tue Nov 17 23:39:20 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed some compilation errors with OpenMP introduced in last commit.
Revision
2749 -
Directory Listing
Modified
Tue Nov 17 07:34:16 2009 UTC
(12 years, 6 months ago)
by
gross
Original Path:
trunk
missing files.
Revision
2748 -
Directory Listing
Modified
Tue Nov 17 07:32:59 2009 UTC
(12 years, 6 months ago)
by
gross
Original Path:
trunk
Macro elements are implemented now. VTK writer for macro elements still needs testing.
Revision
2747 -
Directory Listing
Modified
Tue Nov 17 05:19:59 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
Minor rivision to minGlobalDataPoint()
Revision
2746 -
Directory Listing
Modified
Tue Nov 17 05:13:51 2009 UTC
(12 years, 6 months ago)
by
lgao
Original Path:
trunk
Fix the error in minGlobalDataPoint() and maxGlobalDataPoint() due to
the fact that the number of samples on one MPI rank could be 0. Therefore,
not every MPI rank has valid min/max data point.
Revision
2745 -
Directory Listing
Modified
Tue Nov 17 04:23:02 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Added getInfLocator and getSupLocator to pdetools.
This means if you want to use them, you will need to import them.
These methods return a locator to a point with the smallest/largest value.
Added resolve() and delay() to utils.
Now you can do things like:
d=delay(v)
..
..
z=resolve(d+1)
Revision
2744 -
Directory Listing
Modified
Mon Nov 16 23:45:55 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
SaveVTK: exponent could have 3 digits so reserve enough space.
Revision
2743 -
Directory Listing
Modified
Mon Nov 16 05:28:47 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Corrected memory allocation size for tensors in saveVTK. Fixes issue 460.
Revision
2742 -
Directory Listing
Modified
Thu Nov 12 06:03:37 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Merging changes from the lapack branch.
The inverse() operation has been moved into c++. [No lazy support for this operation yet.]
Optional Lapack support has been added for matrices larger than 3x3.
service0 is set to use mkl_lapack.
Revision
2738 -
Directory Listing
Modified
Fri Nov 6 05:33:13 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Taipan and DataVector use size_type (currently long) internally to talk
about sizes.
[A lot more work needs to be done on this].
Exceptions now give nicer messages and output the problematic numbers.
Some minor doco errors fixed.
escript.util.mkDir
Now checks to see if the pathname already exists as a non-directory.
On suggestion from slanger it now calls makedirs.
Revision
2737 -
Directory Listing
Modified
Tue Nov 3 00:44:00 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
icc will now record compiler options in libraries.
escriptParams now has a pretty printer option for lazy expressions.
Revision
2736 -
Directory Listing
Modified
Mon Nov 2 04:15:27 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
Fixed a couple of typos.
Revision
2735 -
Directory Listing
Modified
Mon Nov 2 02:03:24 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed bug where calling minval() reintroduced laziness after it had been removed.
Revision
2734 -
Directory Listing
Modified
Fri Oct 30 05:39:48 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed bug in lazy maxval and minval
Revision
2733 -
Directory Listing
Modified
Mon Oct 26 02:05:11 2009 UTC
(12 years, 6 months ago)
by
caltinay
Original Path:
trunk
escriptreader: added debug flag to configure.ac
Revision
2732 -
Directory Listing
Modified
Mon Oct 26 01:11:31 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Fixed segfault in debug+omp tests.
Cause:
variable used in parallel section not declared shared.
Revision
2730 -
Directory Listing
Modified
Thu Oct 22 01:50:27 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
order member variable added to the tests.
Revision
2729 -
Directory Listing
Modified
Thu Oct 22 01:45:28 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
UMFPack and MPI added to guineapig options.
Defaults for omp and mpi removed from SConstruct.
Revision
2728 -
Directory Listing
Modified
Thu Oct 22 00:13:10 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
minor
Revision
2727 -
Directory Listing
Modified
Wed Oct 21 23:56:23 2009 UTC
(12 years, 6 months ago)
by
jfenwick
Original Path:
trunk
Added guineapig options
Revision
2726 -
Directory Listing
Modified
Wed Oct 21 23:50:05 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
New diagonal dominancy based algorithm is added. The coarseneng strategy is changed.
Revision
2725 -
Directory Listing
Modified
Wed Oct 21 23:44:06 2009 UTC
(12 years, 6 months ago)
by
artak
Original Path:
trunk
AMG unit tests are disabled for 2-nd order elements.
Revision
2724 -
Directory Listing
Modified
Sun Oct 18 23:50:18 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
And again
Revision
2723 -
Directory Listing
Modified
Sun Oct 18 23:44:37 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Use correct types for MPI op parameters
Revision
2722 -
Directory Listing
Modified
Fri Oct 16 06:45:01 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
First steps towards macro elements. at the monent a macro element is identical to its counterpart of 2nd order.
Revision
2721 -
Directory Listing
Modified
Fri Oct 16 05:40:12 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
minval and maxval are now lazy operations (they weren't before).
Whether or not Lsup, sup and inf resolve their arguments before computing answers is controlled by the escriptParam 'RESOLVE_COLLECTIVE'.
Note: integrate() still forces a resolve.
Added some unit tests for operations which weren't tested before.
Added deepcopy implementations for lazy operations which got missed somehow.
Revision
2720 -
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Modified
Wed Oct 14 23:43:21 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
missing modules added
Revision
2719 -
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Modified
Wed Oct 14 06:38:03 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
a new Stokes solver added
Revision
2718 -
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Modified
Wed Oct 14 04:03:27 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
syntax errors fixed.
Revision
2716 -
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Modified
Tue Oct 13 04:58:08 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Small mod - process C_Tensor??Operation on ExpandedData as a whole
sample rather than a datapoint at a time.
This is just to bring Non-Lazy into line with Lazy.
Revision
2715 -
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Modified
Sun Oct 11 23:29:56 2009 UTC
(12 years, 7 months ago)
by
lgao
Original Path:
trunk
change back to use Intel MPI (avoid the MPT+MKL problem).
Revision
2714 -
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Modified
Wed Oct 7 23:29:19 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
typo in check fixed.
Revision
2713 -
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Modified
Wed Oct 7 00:35:06 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Fixes for windows.
Copied from Thomas Poulet
Revision
2712 -
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Modified
Wed Oct 7 00:22:43 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
MKL made default direct solver for AMG
Revision
2711 -
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Modified
Tue Oct 6 04:43:41 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
Little restructuring for solving memory bug in MKL_free process and making sure LDU factorzation done only once.
Revision
2710 -
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Modified
Mon Oct 5 23:15:04 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Change to error output requested by Thomas Poulet
Revision
2709 -
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Modified
Mon Oct 5 06:11:58 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
Paso_MKL1 put back again
Revision
2708 -
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Modified
Mon Oct 5 05:59:08 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
The n_F==n condition with potentially uninitialized value is fixed.
Revision
2707 -
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Modified
Fri Oct 2 05:02:59 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
some unnecessary lines are removed
Revision
2706 -
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Modified
Fri Oct 2 02:15:04 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Perhaps this will stop the cookbook from hating me.
Revision
2705 -
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Modified
Thu Oct 1 23:21:10 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
Some openMP codes in AMG systems are removed for testing.
Revision
2704 -
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Modified
Thu Oct 1 05:38:33 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
some clarity in the notations REMOVED changes IN_SET
Revision
2703 -
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Modified
Thu Oct 1 01:22:36 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Added calls to MPI_Abort to the pythonMPI wrappers.
Now if an uncaught exception is raised on any of the nodes, the whole world should be brought down. I've tested this on a barrier and it works.
One consequence of this is that you should not call sys.exit(2) but we don't recommend using sys.exit anyway.
Revision
2702 -
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Modified
Wed Sep 30 23:54:17 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
UMFPACK is enabled for savanna
Revision
2701 -
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Modified
Wed Sep 30 23:21:08 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
MKL test lines are removed
Revision
2700 -
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Modified
Wed Sep 30 08:28:55 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
pycad test fixed.
Revision
2699 -
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Modified
Wed Sep 30 05:43:20 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
Direct solver switched to UMFPACK, till problem with MKL solved. When all unknows are eliminated then we switch to Jacobi preconditiner.
Revision
2698 -
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Modified
Wed Sep 30 01:46:31 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Removing extension from some image filenames
Revision
2697 -
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Modified
Wed Sep 30 01:29:22 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Trying to get cookbook scripts passing.
Split cblib in two to avoid importing pylab in scripts which
don't otheriwse need it.
Revision
2696 -
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Modified
Wed Sep 30 00:36:05 2009 UTC
(12 years, 7 months ago)
by
lgao
Original Path:
trunk
change service0_options.py to use MPT 1.24
Revision
2695 -
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Modified
Tue Sep 29 06:29:12 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
pycad passes on more infromation from gmsh now.
Revision
2694 -
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Modified
Tue Sep 29 06:00:44 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
some hint on how to access gmsh error messages added.
Revision
2693 -
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Modified
Tue Sep 29 05:47:45 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
sorry python Indentation Error, fixed
Revision
2692 -
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Modified
Tue Sep 29 05:35:31 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
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minor typo
Revision
2691 -
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Modified
Tue Sep 29 05:30:27 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
Projector class had getSolverOptions(), but was returning null, so changed to return correct solver options.
Revision
2690 -
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Modified
Tue Sep 29 05:23:41 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
some description on gmsh reader added.
Revision
2689 -
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Modified
Tue Sep 29 05:22:51 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
getSolverOptionsDiv was returning Pressure options instead of Div equation options
Revision
2688 -
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Modified
Tue Sep 29 05:19:43 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
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changes to default threshold values
Revision
2687 -
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Modified
Tue Sep 29 04:23:10 2009 UTC
(12 years, 7 months ago)
by
caltinay
Original Path:
trunk
libescriptreader: fixed a path problem when using autotools to build
Revision
2686 -
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Modified
Tue Sep 29 03:39:36 2009 UTC
(12 years, 7 months ago)
by
artak
Original Path:
trunk
changes the default thresold, bug fixes in RS coupling and extra checks added in Solver
Revision
2685 -
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Modified
Tue Sep 29 02:22:30 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
these files are not needed
Revision
2684 -
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Modified
Tue Sep 29 02:21:11 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
added missing file
Revision
2683 -
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Modified
Tue Sep 29 02:20:22 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
documentation for pycad added.
Revision
2681 -
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Modified
Thu Sep 24 03:04:04 2009 UTC
(12 years, 7 months ago)
by
ahallam
Original Path:
trunk
proof reading and review of cookbook, minor changes only + updated depth profiles to cb from last week
Revision
2680 -
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Modified
Thu Sep 24 00:40:07 2009 UTC
(12 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated service0 options file to use Silo 4.7 on Savanna
Revision
2679 -
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Modified
Thu Sep 24 00:36:57 2009 UTC
(12 years, 7 months ago)
by
caltinay
Original Path:
trunk
Updated shake75 options file
Revision
2678 -
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Modified
Wed Sep 23 23:54:16 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Some fixes for compile errors for gcc_testing_version
Revision
2677 -
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Modified
Tue Sep 22 00:48:00 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Removed stuff in user guide about needing to make table larger to allow
boundary points.
The table interpolation is now OMP parallel.
Revision
2676 -
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Modified
Mon Sep 21 08:06:37 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
FaultSystem: MaxValue and MinValue return now a Locator. This makes it possible to extract values of from other data objects at the location of the min/max value
Revision
2675 -
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Modified
Mon Sep 21 02:32:17 2009 UTC
(12 years, 7 months ago)
by
gross
Original Path:
trunk
getMinValue added to the fault system.
Revision
2674 -
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Modified
Mon Sep 21 00:37:18 2009 UTC
(12 years, 7 months ago)
by
jfenwick
Original Path:
trunk
Base matplotlib tests on version number.
This will stop the Mac trying to run some tests it can't execute.
Revision
2673 -
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Modified
Fri Sep 18 05:33:10 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Some fixes to interpolation
Revision
2672 -
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Modified
Fri Sep 18 01:46:47 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
Heat refraction updates : alex's downhole profiles
Revision
2671 -
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Modified
Thu Sep 17 06:37:22 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
missing offset added in interpolation table
Revision
2670 -
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Modified
Thu Sep 17 06:17:57 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Bug that made MPI tests to fail is fixed.
Revision
2669 -
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Modified
Thu Sep 17 06:01:30 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Added a bunch of valgrind supressions. Hopefully this will make it more useful.
Asking for an offset on a DataConstant containing no samples no longer fails under debug builds.
I've disabled the sample and dataPoint bounds checks since they don't make sense on DataConstant.
Revision
2668 -
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Modified
Thu Sep 17 04:04:09 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
some clarification in the table interpolation
Revision
2667 -
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Modified
Thu Sep 17 01:49:11 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Renamed the main cookbook tex file to match our convention.
Replaced doc/cookbook/figures/heatrefraction002contqu.pdf with
a version which is actually pdf. However it needs to be regnerated since
it it sideways.
The examples have had their copyright notices fixed (dates were too early).
sb2.py has been removed since it uses pyvisi.
scons will now build the cookbook as parts of a docs build.
Also in reposnse to :
scons cookbook_pdf
Revision
2666 -
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Modified
Thu Sep 17 00:10:00 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
OpenMP bug fixed and more openMP code added for cutting blocks.
Revision
2665 -
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Modified
Wed Sep 16 02:56:02 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
clarification in the fault depth vector
Revision
2664 -
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Modified
Wed Sep 16 01:06:50 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Extra check is added for AMG levels. If coursening proccess does not eliminate at least 30% from the fine Matrix then it does not make sense to continue to the next level.
Revision
2663 -
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Modified
Tue Sep 15 06:04:44 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
finally there is a 3D version for the fault system class
Revision
2662 -
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Modified
Tue Sep 15 03:05:23 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Migrating to block_sizes greather than 3 made easy.
Revision
2661 -
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Modified
Fri Sep 11 00:59:59 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Finially unit tests for AMG preconditioner for single equations as well as for systems. Minor bug in AMG is also fixed
Revision
2660 -
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Modified
Thu Sep 10 04:26:39 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
minor
Revision
2659 -
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Modified
Thu Sep 10 03:54:50 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
first attempt of AMG on blocks
Revision
2658 -
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Modified
Thu Sep 10 02:58:44 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
Updates to all files scripts to support MPI testing proceedure. Updates to cookbook, new section on functino spaces/domains (needs work). Finalising first 3 chapters for editing.
Revision
2657 -
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Modified
Thu Sep 10 00:58:19 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed some spelling errors.
Added text about parallel vis.
Revision
2656 -
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Modified
Wed Sep 9 23:47:10 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixing doco compile bug
Revision
2655 -
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Modified
Tue Sep 8 23:31:32 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
a comma is missing.
Revision
2654 -
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Modified
Tue Sep 8 07:11:12 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
2D fault systems are now working. 3D still needs work.
Revision
2653 -
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Modified
Tue Sep 8 04:26:30 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fix bug in maxGlobalDataPoint and minGlobalDataPoint.
They now give the correct answers and the datapoint ids returned are globally
correct.
Removed some #defines from before COW
Removed hasNoSamples() - I don't trust myself to use that properly let alone anybody else.
Revision
2652 -
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Modified
Mon Sep 7 05:04:45 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Paso_Pattern_coup changed to Paso_Pattern_YS for making clear that it refers to YAIR-SHAPIRA coarsenenig.
Revision
2651 -
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Modified
Mon Sep 7 03:39:45 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed latex compile error.
Fixed some overful hboxes
Revision
2650 -
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Modified
Mon Sep 7 03:38:50 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Reducing the concentration of stupid.
Revision
2649 -
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Modified
Mon Sep 7 03:33:55 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
Some small fixes in FaultSystem
Revision
2648 -
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Modified
Mon Sep 7 00:06:15 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
ecording some changes related to Anthony's cookbook.
These tests still do not run.
test_heatref.py is the current problem.
Current problems include:
undefined symbols
a dependence on X somehow.
I've already addressed the matplotlib X thing somewhere else.
Find and apply.
Revision
2647 -
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Modified
Fri Sep 4 05:25:25 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
fault system add. There is still an example for the usage missing.
Revision
2646 -
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Modified
Fri Sep 4 00:13:00 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Unit tests and user doco for interpolation and saveCSV
Revision
2645 -
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Modified
Thu Sep 3 02:20:33 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
More revisions to cookbook, fixed cblib.py for Scons, new figures.
Revision
2644 -
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Modified
Wed Sep 2 04:14:03 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Add unit tests for saveDataCSV which should be ready for use now.
Keyword args are now output in sorted order.
Removed some unneeded functions.
Revision
2643 -
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Modified
Wed Sep 2 00:10:00 2009 UTC
(12 years, 8 months ago)
by
artak
Original Path:
trunk
Saving sparse matrix used before for debuging is removed
Revision
2642 -
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Modified
Tue Sep 1 04:15:50 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
pre cleanup
Revision
2641 -
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Modified
Mon Aug 31 07:41:49 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed some of my stupids related to MPI compile errors.
Revision
2640 -
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Modified
Mon Aug 31 06:22:10 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Adding getMPIComm
Revision
2637 -
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Modified
Fri Aug 28 04:12:24 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
saveDataCSV looks good but does not do MPI yet.
Also not unit tested.
Revision
2636 -
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Modified
Thu Aug 27 05:26:42 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Disabling cookbook example checks until we can fix them.
Revision
2635 -
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Modified
Thu Aug 27 04:54:41 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
A bunch of changes related to saveDataCSV.
[Not completed or unit tested yet]
Added saveDataCSV to util.py
AbstractDomain (and MeshAdapter) have a commonFunctionSpace method to
take a group of FunctionSpaces and return something they can all be interpolated to.
Added pointToStream() in DataTypes to help print points.
added actsConstant() to data - required because DataConstant doesn't store samples the same way other Data do.
Revision
2634 -
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Modified
Thu Aug 27 04:03:32 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
Updates to cookbook. Updates to scripts. Updates to figures. Working examples added to SCons. Data folder structure included minus data. More folder rejigging.
Revision
2633 -
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Modified
Wed Aug 26 22:21:52 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
Sorry second regigging
Revision
2632 -
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Modified
Wed Aug 26 22:18:19 2009 UTC
(12 years, 8 months ago)
by
ahallam
Original Path:
trunk
Regigger of cookbook directory structure. Examlples->examples/cookbook TEXT->doc/cookbook Figures-> doc/cookbook/figures
Revision
2629 -
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Modified
Tue Aug 25 06:39:26 2009 UTC
(12 years, 8 months ago)
by
trankine
Original Path:
trunk
Changes to work on Windows with boost 1.39.0. Using command separator &. Note: there are still 2 CheckFunc that fail (but can be bypassed as the rest of the build works).
Revision
2628 -
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Modified
Tue Aug 25 03:50:00 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Fixed linkage on getTestDomainFunctionSpace.
added Data.interpolateTable to perform 2D interpolation.
It needs better unit tests though.
Revision
2627 -
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Modified
Mon Aug 24 01:57:34 2009 UTC
(12 years, 8 months ago)
by
gross
Original Path:
trunk
some bugs in pycad fixed.
Revision
2626 -
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Modified
Mon Aug 24 00:48:31 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Making arg0 and arg params in C_GeneralTensorProduct non-optional.
[The using the default args caused an exception.]
Revision
2625 -
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Modified
Fri Aug 21 06:30:25 2009 UTC
(12 years, 8 months ago)
by
jfenwick
Original Path:
trunk
Merging changes from new doco branch.
All docstrings are now in reStructured text.
A few email addresses have been fixes as well.
Revision
2620 -
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Modified
Thu Aug 20 06:24:00 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
some small additions to pycad to make life a bit easier.
Revision
2608 -
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Modified
Tue Aug 18 01:25:18 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Updating Lutz' email
Revision
2607 -
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Modified
Tue Aug 18 01:02:56 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Added getMPIWorldSum function to the esys.escript module.
This function takes an integer from each member of the MPIWorld.
This will hopefully address mantis issue 359
Added unit tests for most of the c++ free functions in the module.
Revision
2606 -
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Modified
Thu Aug 13 04:32:23 2009 UTC
(12 years, 9 months ago)
by
ahallam
Original Path:
trunk
Updates to first chapter in cookbook -> approaching completion.
New figures added for model descriptions.
Scripts updated to use pylab/matplotlib and movie making scripts added for *.avi creation.
Still to finalise in chapter 1
- twodheatdiff model of intrusion
-contouring
- heat refraction scripts and begin cookbook sections
- pycad discussion
- steady state pde discussion
- quiver plot discussion
Revision
2605 -
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Modified
Wed Aug 12 22:30:47 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
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some changes to the cook book
Revision
2604 -
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Modified
Wed Aug 12 01:21:46 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
The prefix option for building escript now works correctly.
This fixes mantis issue #362.
Revision
2603 -
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Modified
Wed Aug 12 00:44:35 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Compute nodes will now read the correct options file and use the correct compiler.
I have added env_export to the service0 options file.
Use this if there are variables from the calling environment which need to be passed through scons. (In this case the INTEL_LICENSE_FILE variable).
There are still some issues with icpc linking.
Revision
2602 -
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Modified
Tue Aug 11 00:38:42 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Merging changes made for release3.0 back to trunk.
Revision
2600 -
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Modified
Fri Aug 7 04:47:49 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Using the 'agg' backend in matplotlib to avoid reference to the X Display.
Revision
2599 -
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Modified
Fri Aug 7 00:16:02 2009 UTC
(12 years, 9 months ago)
by
caltinay
Original Path:
trunk
saveESD: added option to save mesh at each timestep if required.
Revision
2598 -
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Modified
Thu Aug 6 03:47:56 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
small fix in ReversedCurve clas
Revision
2597 -
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Modified
Thu Aug 6 03:30:09 2009 UTC
(12 years, 9 months ago)
by
ahallam
Original Path:
trunk
Updates to: cookbook documentation; heat refraction problems; mencoder investigation for *.png animation
Revision
2596 -
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Modified
Thu Aug 6 03:09:03 2009 UTC
(12 years, 9 months ago)
by
lgao
Original Path:
trunk
Add new diagnostic information: "net time" (the execution time of solver, excluding the setup time for solver and the execution time of preconditioner)
Revision
2595 -
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Modified
Thu Aug 6 00:49:09 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
there was wrong test which triggered an excpetion in some cases where things were actually right
Revision
2594 -
Directory Listing
Modified
Thu Aug 6 00:47:48 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
change to the default value for toListOfTuples
Revision
2592 -
Directory Listing
Modified
Thu Aug 6 00:43:19 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
additional tests for the Locator
Revision
2588 -
Directory Listing
Modified
Wed Aug 5 22:42:36 2009 UTC
(12 years, 9 months ago)
by
ahallam
Original Path:
trunk
Heat diffraction initial committal 2 weeks work.
Revision
2583 -
Directory Listing
Modified
Wed Aug 5 01:49:56 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Minor fixes
Revision
2581 -
Directory Listing
Modified
Wed Aug 5 01:11:33 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fixed unit test for missing matplotlib case.
Revision
2580 -
Directory Listing
Modified
Tue Aug 4 08:24:12 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
another example for the usage of matplot lib added to users guide.
Revision
2578 -
Directory Listing
Modified
Tue Aug 4 04:05:36 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fixed problem with unit tests
Revision
2575 -
Directory Listing
Modified
Mon Aug 3 23:38:33 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Fixed some grammar note about Lenny not working.
Revision
2574 -
Directory Listing
Modified
Mon Aug 3 09:09:20 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
matplotlib description added to usersguide
Revision
2573 -
Directory Listing
Modified
Mon Aug 3 04:30:09 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
some more fixes on solver options.
Revision
2568 -
Directory Listing
Modified
Fri Jul 31 05:37:41 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Updated install guide to include the correct version of python.
Updated Mac build instructions not to use numarray or frameworks.
Removed (commented out) references to MacPorts in the Mac instructions.
- These need to be updated and Artak isn't here.
Removed (commented out) references to windows in the install guide.
CSIRO won't have a windows release ready yet.
Revision
2567 -
Directory Listing
Modified
Fri Jul 31 01:17:37 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Added example options file for Mac
Revision
2566 -
Directory Listing
Modified
Wed Jul 29 01:39:16 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
AMG on systems not supported yet exeption is added
Revision
2565 -
Directory Listing
Modified
Tue Jul 28 05:50:15 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
stopping criteria is slightly changed.
Revision
2564 -
Directory Listing
Modified
Tue Jul 28 04:46:38 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
reduced PDE solutions added to topography
Revision
2563 -
Directory Listing
Modified
Tue Jul 28 03:50:45 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
reengineered version of the mountain class so it becomes easier to use for the convection code
Revision
2562 -
Directory Listing
Modified
Tue Jul 28 01:25:12 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
inplace bugs are fixed
Revision
2561 -
Directory Listing
Modified
Mon Jul 27 07:38:45 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
small bug in the calculation of the errors fixed.
Revision
2560 -
Directory Listing
Modified
Mon Jul 27 07:38:00 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
a test for unique PropertySet name added.
Revision
2559 -
Directory Listing
Modified
Mon Jul 27 05:19:21 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
typo: MaxIter changed IterMax
Revision
2558 -
Directory Listing
Modified
Mon Jul 27 05:03:32 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
a table added showing the available solver options for finley paso.
Revision
2557 -
Directory Listing
Modified
Mon Jul 27 04:46:37 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
minor comments changed
Revision
2556 -
Directory Listing
Modified
Mon Jul 27 02:05:20 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
memory leack fixed
Revision
2555 -
Directory Listing
Modified
Mon Jul 27 01:50:16 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
Pattern_free for Aggregiation coarsening is added.
Revision
2554 -
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Modified
Fri Jul 24 05:38:54 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
bug with MKL call fixed.
Revision
2553 -
Directory Listing
Modified
Fri Jul 24 01:30:14 2009 UTC
(12 years, 9 months ago)
by
jfenwick
Original Path:
trunk
Added another citation.
Revision
2552 -
Directory Listing
Modified
Fri Jul 24 00:42:10 2009 UTC
(12 years, 9 months ago)
by
artak
Original Path:
trunk
openmp change
Revision
2551 -
Directory Listing
Modified
Thu Jul 23 09:19:15 2009 UTC
(12 years, 9 months ago)
by
gross
Original Path:
trunk
a problem with the sparse matrix unrolling fixed.
Revision
2550 -
Directory Listing
Modified
Tue Jul 21 03:36:13 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
AMG throws an error now if block size not 1
Revision
2549 -
Directory Listing
Modified
Mon Jul 20 06:43:47 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Remainder of copyright date fixes
Revision
2548 -
Directory Listing
Modified
Mon Jul 20 06:20:06 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Updating copyright notices
Revision
2547 -
Directory Listing
Modified
Mon Jul 20 05:50:46 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
More work on the install guide.
Revision
2546 -
Directory Listing
Modified
Mon Jul 20 05:35:08 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Updated builddeb script to include the architecture in the package filename.
(the architecture is also written into the control file).
Modified dependencies to not include VTK.
Added python-matplotlib as a "Recomends" dependency.
This means we can build 64bit debs now.
Revision
2545 -
Directory Listing
Modified
Mon Jul 20 04:54:57 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
Install guide: fixed a minor typo
Revision
2544 -
Directory Listing
Modified
Mon Jul 20 04:50:38 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
Enable building doxygen docs for the escriptreader library.
Revision
2543 -
Directory Listing
Modified
Mon Jul 20 04:38:21 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
Install guide: fixed latex compilation due to incompatible hyperref package.
Revision
2542 -
Directory Listing
Modified
Mon Jul 20 04:18:27 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Importing esys.pyvisi now generates a warning.
Revision
2541 -
Directory Listing
Modified
Mon Jul 20 00:25:55 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added matplotlib to the stand-alone path.
Removed VTK
Revision
2540 -
Directory Listing
Modified
Mon Jul 20 00:09:55 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Deprecating pyvisi in the user guide.
Revision
2539 -
Directory Listing
Modified
Sat Jul 18 02:47:34 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
the line added in RS for symetricity brings factorization failure in heatedblock example
Revision
2538 -
Directory Listing
Modified
Fri Jul 17 06:24:15 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
Install guide: Reworked introduction and enabled hyperref package
Revision
2537 -
Directory Listing
Modified
Fri Jul 17 05:50:35 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Operation_make_pyvisi_go_away: Stage 1 of PI
Removing pyvisi example files.
Revision
2536 -
Directory Listing
Modified
Thu Jul 16 23:53:07 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
installguide: Fixed typos, minor semantics, repetitions and whitespace issues.
Revision
2535 -
Directory Listing
Modified
Thu Jul 16 23:39:58 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
LinearPDE is now updating stiffness matrix and right hand side even only geometry is modified. fix for 333
Revision
2534 -
Directory Listing
Modified
Thu Jul 16 06:49:19 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
Changed examples, tests and tutorials to save VTK files as .vtu instead .xml.
Visit doesn't know what to do with xml's and vtu is the proper extension
anyway.
Revision
2533 -
Directory Listing
Modified
Wed Jul 15 05:57:01 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
finley delivers now a status identifier of the mesh.
Revision
2532 -
Directory Listing
Modified
Fri Jul 10 01:13:44 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
libescriptreader: fixed a typo in configure script and added missing lib
to Makefile.
Revision
2531 -
Directory Listing
Modified
Thu Jul 9 23:56:57 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Setting always build on the api_epydoc target as a quick work around
Revision
2530 -
Directory Listing
Modified
Thu Jul 9 06:08:44 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Some changes relating to install from source.
Revision
2529 -
Directory Listing
Modified
Thu Jul 9 06:06:35 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Some changes to the install guide.
More work to do.
Revision
2528 -
Directory Listing
Modified
Wed Jul 8 23:27:49 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added stand-alone example options file for install instructions.
Revision
2527 -
Directory Listing
Modified
Wed Jul 8 07:04:35 2009 UTC
(12 years, 10 months ago)
by
lgao
Original Path:
trunk
endof line added.
Revision
2526 -
Directory Listing
Modified
Wed Jul 8 05:52:06 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
util: Updated saveESD to allow saving of time series. Combined with an update
of the visit plugin this fixes issue 325.
Revision
2525 -
Directory Listing
Modified
Wed Jul 8 03:41:15 2009 UTC
(12 years, 10 months ago)
by
caltinay
Original Path:
trunk
libescriptreader: Added 'timestep increment' option to allow time series files
to be named like file.0, file.10, file.20 etc.
Revision
2524 -
Directory Listing
Modified
Wed Jul 8 00:39:26 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
Minimum size of the coarsest level matrix option added to solver options
Revision
2523 -
Directory Listing
Modified
Wed Jul 8 00:07:36 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixed bug in MPI form of mkDir
Revision
2522 -
Directory Listing
Modified
Tue Jul 7 06:17:47 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Split test_util_spatial_functions.py into three python files (it had three classes in it).
This reduces memory required to compile down to about 600Mb each as opposed to >1Gb.
This should not affect the tests performed.
Revision
2521 -
Directory Listing
Modified
Tue Jul 7 00:08:58 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Modified Lazy so that resolving a single sample uses the node cache method.
Fixed some doxygen problems.
Revision
2520 -
Directory Listing
Modified
Mon Jul 6 03:13:11 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
AMG now takes as an input Paso_options for selecting coarsenening algorithm and treshold variable.
Revision
2519 -
Directory Listing
Modified
Mon Jul 6 00:43:08 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Correcting some doxygen errors
Revision
2518 -
Directory Listing
Modified
Fri Jul 3 07:43:11 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
bug in setNewX fixed: now it is made sure that the FunctionSpace of the new coordinates is correct.
Revision
2517 -
Directory Listing
Modified
Fri Jul 3 05:27:45 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixed bug in Locator
Revision
2516 -
Directory Listing
Modified
Fri Jul 3 02:51:05 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
files are not needed anymore.
Revision
2515 -
Directory Listing
Modified
Fri Jul 3 00:59:05 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
missing files for documentation
Revision
2514 -
Directory Listing
Modified
Fri Jul 3 00:57:45 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixed compile warning on Mac
Revision
2513 -
Directory Listing
Modified
Thu Jul 2 08:42:11 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
some fixes in wave.py example
Revision
2512 -
Directory Listing
Modified
Thu Jul 2 05:34:14 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Made the warnings against linking gomp a bit more detailed.
Commented out gomp from the linux sample.
Revision
2511 -
Directory Listing
Modified
Thu Jul 2 05:16:19 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
more openmp
Revision
2510 -
Directory Listing
Modified
Thu Jul 2 05:15:59 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
fix for INTELMPI
Revision
2509 -
Directory Listing
Modified
Thu Jul 2 04:51:51 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
Now one can choose coarsening method from python for AMG. Some commented lines are removed.
Revision
2508 -
Directory Listing
Modified
Thu Jul 2 04:33:25 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Ensured that example files are copied with build_py_tests rather than py_tests.
This means that:
build_full
will set up all the files ready for utest.sh
Revision
2507 -
Directory Listing
Modified
Thu Jul 2 03:14:35 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
some profiling tools added
Revision
2506 -
Directory Listing
Modified
Thu Jul 2 01:23:30 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fix to allow binary unit tests to run.
Note: I have only fixed the non-windows systems and I don't know if they
have the same problem.
Diagnosis of the utest problems continues.
Revision
2505 -
Directory Listing
Modified
Thu Jul 2 00:46:53 2009 UTC
(12 years, 10 months ago)
by
lgao
Original Path:
trunk
adding config file for Lin's machine
Revision
2504 -
Directory Listing
Modified
Wed Jul 1 07:27:17 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
First stage of fix to utest.sh
Revision
2503 -
Directory Listing
Modified
Wed Jul 1 05:05:08 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixing doc build so examples tar and zip are built properly.
Fixed image filenames in user guide.
Please do not put extensions on image files.
Revision
2502 -
Directory Listing
Modified
Tue Jun 30 05:49:22 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
tests for examples added. utest is not working yet.
Revision
2501 -
Directory Listing
Modified
Tue Jun 30 04:43:01 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Caching now works.
Number of levels and nodes permitted in a lazy expression has increased to 70 and 15000.
Revision
2500 -
Directory Listing
Modified
Tue Jun 30 00:42:38 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Experimental per node cache for lazy evaluation is now available via the
LAZY_NODE_STORAGE #define
It's a bit slower and larger for small problems but a bit faster and
smaller for large (drucker prager) problems.
Revision
2499 -
Directory Listing
Modified
Mon Jun 29 04:31:00 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
new stand
Revision
2498 -
Directory Listing
Modified
Mon Jun 29 04:25:23 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
new function MaskFromTag
Revision
2497 -
Directory Listing
Modified
Mon Jun 29 00:04:45 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Calling resolve now replaces resolved expression with an identity node.
Revision
2496 -
Directory Listing
Modified
Fri Jun 26 06:09:47 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added lazy version of swapaxes operation.
Revision
2495 -
Directory Listing
Modified
Fri Jun 26 03:39:21 2009 UTC
(12 years, 10 months ago)
by
ahallam
Original Path:
trunk
Many revisions to Head Diff Documentation, One grammar correction to user guide.
Revision
2494 -
Directory Listing
Modified
Thu Jun 25 05:00:57 2009 UTC
(12 years, 10 months ago)
by
ahallam
Original Path:
trunk
Many updates to onedheatdiff in example and documentation. Still in need of some TLC however.
Revision
2493 -
Directory Listing
Modified
Thu Jun 25 02:58:52 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Taipan now prints an error message if new[] throws.
Note, the exception is rethrown after the message is printed.
Revision
2492 -
Directory Listing
Modified
Wed Jun 24 01:28:57 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
MPI_DOUBLE changed to MPI_INT as lowProc is int
Revision
2491 -
Directory Listing
Modified
Wed Jun 24 00:03:08 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
some modifications to the OPENMPI launcher.
Revision
2490 -
Directory Listing
Modified
Tue Jun 23 06:02:26 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
adjusting to new Paso_Options.
Revision
2489 -
Directory Listing
Modified
Tue Jun 23 06:00:25 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
void *solver; is added to Paso_SpaseMatrix struct. Paso_MKL will need this.
Revision
2488 -
Directory Listing
Modified
Tue Jun 23 05:56:33 2009 UTC
(12 years, 10 months ago)
by
artak
Original Path:
trunk
Paso_MKL1 supports Paso_SparseMatrix type with offset1
Revision
2487 -
Directory Listing
Modified
Tue Jun 23 04:26:07 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Fixed const-ness on some return values.
Null-Domain now reports tag one as being in use.
Revision
2486 -
Directory Listing
Modified
Tue Jun 23 03:38:54 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
a bit more info are printed for the DarcyFlux now.
Revision
2485 -
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Modified
Mon Jun 22 07:27:31 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
Added unit test file.
Revision
2484 -
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Modified
Mon Jun 22 04:22:19 2009 UTC
(12 years, 10 months ago)
by
gross
Original Path:
trunk
numarray removed from docu; Locator revised.
Revision
2483 -
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Modified
Mon Jun 22 03:33:43 2009 UTC
(12 years, 10 months ago)
by
jfenwick
Original Path:
trunk
And Joel closes the barn door.
Revision
2482 -
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Modified
Fri Jun 19 05:56:20 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Added run_data_access.py to unit tests - tests things like toListOfTuples.
Corrected some doco comments.
Added TestDomain class to escript.
This should allow more testing without resorting to finley.
Revision
2481 -
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Modified
Fri Jun 19 04:29:06 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Corrected a comment and fixed more bugs in the bulk copyFromArrayToOffset method.
Revision
2480 -
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Modified
Fri Jun 19 03:35:14 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
test fixed.
Revision
2479 -
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Modified
Thu Jun 18 06:50:37 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
paso returns now some diagnostics. SCSL has been removed.
Revision
2478 -
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Modified
Thu Jun 18 06:20:57 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Fixed bug when creating scalar expanded data.
Fixed some comments and moved a variable into anonymous namespace
Revision
2477 -
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Modified
Wed Jun 17 06:22:15 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
modification to the cookbook
Revision
2476 -
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Modified
Wed Jun 17 04:42:13 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Added maxGlobalDataPoint.
Not currently unit tested.
Revision
2475 -
Directory Listing
Modified
Wed Jun 17 01:48:46 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
trunk
AMG now takes into account new SolverOptions class, namely one can select coarsening algorithms from python. Not all options are included into AMG, this will be implemented later on.
Revision
2474 -
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Modified
Tue Jun 16 06:32:15 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
linearPDEs has is now using the SolverOptions class to talk to PASO
Revision
2473 -
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Modified
Mon Jun 15 02:21:07 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Change logging functions so I don't get confused about what they do.
Added parameter to name the log file if called directly.
Revision
2472 -
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Modified
Thu Jun 11 23:33:47 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Added new params to control auto resolving for lazy data
Revision
2471 -
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Modified
Thu Jun 11 23:33:06 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Fixed extract of ndarray from xml to properly return booleans.
Modified some strings which had numarray:: in them
Revision
2470 -
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Modified
Thu Jun 11 08:32:32 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
SolverOption class added. It is not linked with anything.
Revision
2469 -
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Modified
Thu Jun 11 04:52:14 2009 UTC
(12 years, 11 months ago)
by
ahallam
Original Path:
trunk
Week 11: Close to finishing wave equation, looking at adding friction to wave equation.
Revision
2468 -
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Modified
Thu Jun 11 02:55:51 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
trunk
some more work toward numpy
Revision
2467 -
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Modified
Tue Jun 9 23:12:04 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Fixed a missing file.
Revision
2466 -
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Modified
Tue Jun 9 05:02:56 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Fixed build from source instructions for linux to include offscreen rendering by default!
Revision
2465 -
Directory Listing
Modified
Tue Jun 9 05:01:36 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
trunk
Changed the default behaviour of Data::toListOfTuples() so that scalars are returned in tuples.
This is to match the behaviour of getTupleForDataPoint.
Revision
2464 -
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Modified
Tue Jun 9 04:14:07 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
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updated to use openmpi
Revision
2463 -
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Modified
Tue Jun 9 03:51:23 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Added an svn-ignore, added changes and references section to user guide.
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2462 -
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Fri Jun 5 06:04:01 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Modified wrapper script to correctly point at numpy in standalone builds.
Updated build from source doco for linux to take numpy into account.
Also removed backticks in favour of $() - it should be the same but latex won't eat them
Revision
2461 -
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Modified
Fri Jun 5 05:06:31 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Trying to presize a list to reduce runtime of toListOfTuples
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2460 -
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Fri Jun 5 05:04:45 2009 UTC
(12 years, 11 months ago)
by
ahallam
Original Path:
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Week 10:
Continued work on wave equation and tutorial write up.
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2459 -
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Thu Jun 4 06:17:54 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Removed some commented out code.
Added toListOfTuples to the DataObject.
Revision
2458 -
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Modified
Wed Jun 3 06:18:21 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Various numarray erasures
Revision
2456 -
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Modified
Wed Jun 3 03:54:25 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Switching savanna scons to use python-2.6.2 and boost-1.39
Revision
2455 -
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Wed Jun 3 03:29:07 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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Merging changes from numpy branch.
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2450 -
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Tue Jun 2 01:22:11 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
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First version of 'greedy' algorithm for Ruge Stuben and Aggregiation.
Revision
2448 -
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Fri May 29 04:47:48 2009 UTC
(12 years, 11 months ago)
by
ahallam
Original Path:
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Week 9: implemented cosine taper for wave function, need to work on direct method without lumping, wave propagation velocity is still not correct
Revision
2447 -
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Fri May 29 04:32:53 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
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minor
Revision
2446 -
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Modified
Fri May 29 04:24:01 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
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same adjustment of nameing
Revision
2445 -
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Modified
Fri May 29 03:23:25 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
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some improvement on convection which ios now working again
Revision
2443 -
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Fri May 29 01:44:22 2009 UTC
(12 years, 11 months ago)
by
ahallam
Original Path:
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Fixing some things
Revision
2442 -
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Modified
Fri May 29 00:39:44 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
trunk
Some bugs are fixed.
Revision
2440 -
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Modified
Wed May 27 08:45:55 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
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convection works now again.
Revision
2439 -
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Modified
Tue May 26 04:34:21 2009 UTC
(12 years, 11 months ago)
by
artak
Original Path:
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AMG now works with blocksize 3. Logical block sizes replaced with real block size before starting AMG. But this happens only when we use AMG as a preconditioner.
Revision
2438 -
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Tue May 26 02:26:52 2009 UTC
(12 years, 11 months ago)
by
gross
Original Path:
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new version of power law (blame Hans)
Revision
2436 -
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Mon May 25 05:05:00 2009 UTC
(12 years, 11 months ago)
by
jfenwick
Original Path:
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A fix for escript not compiling on boost 1.39.
Revision
2434 -
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Modified
Thu May 21 07:59:53 2009 UTC
(13 years ago)
by
ahallam
Original Path:
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Week 8: Still working on seismic wave propagation. Need to come up with a smooth source function next week. All TEXT files up to date.
Revision
2433 -
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Modified
Wed May 20 08:43:43 2009 UTC
(13 years ago)
by
gross
Original Path:
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some documentation on power law added
Revision
2432 -
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Modified
Wed May 20 06:06:20 2009 UTC
(13 years ago)
by
gross
Original Path:
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power law and incompressible flow is running now
Revision
2431 -
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Modified
Wed May 20 03:39:57 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Added at the request of Dian.
Revision
2430 -
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Modified
Wed May 20 03:20:57 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Use Variables class instead of Options in scons versions which support
it.
Revision
2429 -
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Modified
Tue May 19 10:04:54 2009 UTC
(13 years ago)
by
gross
Original Path:
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pycad allows noe to set the number of elements per line and the generation of quadrilateral elements over serfaces.
Revision
2428 -
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Tue May 19 04:04:11 2009 UTC
(13 years ago)
by
gross
Original Path:
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problem for python2.4 fixed: IOError has no attribute message.
Revision
2427 -
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Fri May 15 04:29:01 2009 UTC
(13 years ago)
by
ahallam
Original Path:
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Week 7: Work done on wave problem.
Revision
2426 -
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Modified
Fri May 15 04:28:31 2009 UTC
(13 years ago)
by
ahallam
Original Path:
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Week 7: Work done on wave problem.
Revision
2425 -
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Modified
Thu May 14 09:06:35 2009 UTC
(13 years ago)
by
gross
Original Path:
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bug in getListOfTags fixed and some tested added
Revision
2424 -
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Modified
Thu May 14 05:15:47 2009 UTC
(13 years ago)
by
gross
Original Path:
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small bug fixed.
Revision
2423 -
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Modified
Thu May 14 05:02:20 2009 UTC
(13 years ago)
by
gross
Original Path:
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* handling LD_LIBRARY_PATH for Windows (that only uses PATH)
* passing PATH env var in mpi call for Windows
Revision
2422 -
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Modified
Thu May 14 03:17:28 2009 UTC
(13 years ago)
by
gross
Original Path:
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bug in testing saveVTK fixed
Revision
2421 -
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Modified
Thu May 14 02:29:06 2009 UTC
(13 years ago)
by
gross
Original Path:
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vtk writer supports now meta data and meta data schema
Revision
2420 -
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Modified
Thu May 14 02:28:58 2009 UTC
(13 years ago)
by
gross
Original Path:
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vtk writer supports now meta data and meta data schema
Revision
2419 -
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Modified
Thu May 14 01:56:18 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Use os.path.join instead of os.sep in tests
If you can read this message it means svn commit mails are working again.
... Or you are looking at the logs
Revision
2418 -
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Modified
Wed May 13 08:36:04 2009 UTC
(13 years ago)
by
gross
Original Path:
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redirect stdout to NULL instead of /dev/null for Windows
Revision
2417 -
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Modified
Wed May 13 08:18:47 2009 UTC
(13 years ago)
by
gross
Original Path:
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some remarks on load and dump added to the users guide.
Revision
2416 -
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Modified
Wed May 13 06:03:59 2009 UTC
(13 years ago)
by
gross
Original Path:
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* fix Windows MPI case: export system variables
* define ESCRIPT_NUM_PROC and ESCRIPT_NUM_NODES
* cleanup using os.path.join()
Revision
2415 -
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Modified
Wed May 13 02:48:39 2009 UTC
(13 years ago)
by
gross
Original Path:
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FileWriter added: this class takes care of writing data which are global in MPI to a file. It is recommended to use this class rather then the build in open as it takes care of the case of many processors.
Revision
2414 -
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Modified
Tue May 12 03:33:49 2009 UTC
(13 years ago)
by
gross
Original Path:
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added flags (commented out) to compile MPI version on Windows (Visual Studio 2003) using MPICH2
Revision
2413 -
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Modified
Tue May 12 01:26:20 2009 UTC
(13 years ago)
by
artak
Original Path:
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There was a bug in computing logical_block_size. It was always returning 0.
Revision
2412 -
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Modified
Fri May 8 04:27:17 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Clean up cookbook-
Cleaned up the svn:ignore
removed some latex intermediate files
Revision
2411 -
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Modified
Fri May 8 03:13:15 2009 UTC
(13 years ago)
by
ahallam
Original Path:
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Week 6 I think?? Started work on 2d wave solution, want to change from verlet according to lutz. Have semi finished heat diffusion but is ready for review and further modification in the future. Added new sections to first chapter, may or may not be needed but added as a reminder anyway.
Revision
2409 -
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Modified
Tue May 5 06:22:11 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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bin/escript is now under version control.
The wrapper template is no longer used.
Extraneous output doc removed from scons during build.
note: finleypython is no longer built (it was deprecated anyway).
Revision
2405 -
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Modified
Wed Apr 29 23:57:38 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Another attempt at building the doco.
--transform is not supported by savanna's tar
Revision
2404 -
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Modified
Wed Apr 29 06:53:36 2009 UTC
(13 years ago)
by
gross
Original Path:
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documentation for units added.
Revision
2403 -
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Modified
Wed Apr 29 06:08:18 2009 UTC
(13 years ago)
by
gross
Original Path:
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units support Celsius, Farenheit and kelvin now
Revision
2402 -
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Modified
Wed Apr 29 06:02:21 2009 UTC
(13 years ago)
by
jfenwick
Original Path:
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Fixing the build of example tar and zip files so they don't have full
paths.
Revision
2401 -
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Modified
Wed Apr 29 04:23:07 2009 UTC
(13 years ago)
by
ahallam
Original Path:
trunk
End Week 5:
Renamed *.tex files to more logical, changed to chapter format as HEAT_DIFFUSION.tex
Editted and Reviewed text portion and some python scripts for heat diffusion.
Looking to push for finalisation on heat diffusion in the next couple of week to begin next modelling problem/Chapter.
Revision
2399 -
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Modified
Tue Apr 28 12:04:34 2009 UTC
(13 years ago)
by
gross
Original Path:
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some improvements on units
Revision
2398 -
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Modified
Tue Apr 28 04:41:53 2009 UTC
(13 years ago)
by
gross
Original Path:
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first version of units in escript
Revision
2397 -
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Modified
Fri Apr 24 04:24:28 2009 UTC
(13 years ago)
by
ahallam
Original Path:
trunk
End Week 4, Finalised 1D examples, need work on text but script ok.
Begining of 2D example builds on 1D. Script semi-finalised, text to complete.
Revision
2394 -
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Modified
Fri Apr 17 01:32:30 2009 UTC
(13 years, 1 month ago)
by
caltinay
Original Path:
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Updated shake75 options file.
Revision
2393 -
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Modified
Thu Apr 16 04:24:07 2009 UTC
(13 years, 1 month ago)
by
ahallam
Original Path:
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End Day Commit
Working on onedheatdiff_var001
Revision
2392 -
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Modified
Thu Apr 16 01:53:23 2009 UTC
(13 years, 1 month ago)
by
ahallam
Original Path:
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Initial Commital of CookBook to SVN
Has 2.5 Weeks work and semi completed first heat diffusion tutorial
Revision
2391 -
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Modified
Thu Apr 16 01:08:57 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Minor tweak to title page.
Better handling of alternative names in SConstruct.
Revision
2390 -
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Modified
Wed Apr 15 06:46:42 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some minor fixes.
Revision
2389 -
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Modified
Wed Apr 15 06:46:01 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
trunk
some minor fixes.
Revision
2388 -
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Modified
Wed Apr 15 06:21:25 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
trunk
scons files executed on compute nodes will use the config file for the service node (when we get the other issues
sorted).
Revision
2387 -
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Modified
Wed Apr 15 05:05:27 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Changed the figure eps->pdf to use a builder to make hypothetical windows doc building easier.
Revision
2386 -
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Modified
Wed Apr 15 03:54:25 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some minor fixes
Revision
2385 -
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Modified
Wed Apr 15 03:52:38 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
trunk
two fixes dealing with zero samples under MPI
Revision
2384 -
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Modified
Wed Apr 15 00:17:20 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Added getDataRW to DataC
Revision
2383 -
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Modified
Tue Apr 14 03:53:56 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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-h parameter added for help
Revision
2382 -
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Modified
Tue Apr 14 03:48:22 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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Testing environment now mor flexible. Added a lot of options.
Revision
2381 -
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Modified
Tue Apr 14 03:46:59 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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Ruge Stuben and Aggregiation is added for testing performance of AMG solver.
Revision
2380 -
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Modified
Tue Apr 14 03:23:29 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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minor typo
Revision
2379 -
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Modified
Thu Apr 9 07:36:55 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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type fixed.
Revision
2378 -
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Modified
Thu Apr 9 01:09:08 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Added warning when openmp params are specified by escript was build without openmp.
escript now reports the number of threads requested.
Revision
2377 -
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Modified
Wed Apr 8 07:57:55 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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a namespace problem in pycad fixed.
Revision
2376 -
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Modified
Tue Apr 7 06:21:31 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
trunk
output form others than the master process can now be switched off (stderr is still redirected to master)
Revision
2375 -
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Modified
Tue Apr 7 04:41:28 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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MPI hints added
Revision
2374 -
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Modified
Tue Apr 7 00:26:49 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Modified utest to use the wrapper script.
Revision
2373 -
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Mon Apr 6 23:49:31 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Minor spelling and man page tweaks.
Revision
2372 -
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Modified
Mon Apr 6 23:36:15 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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changes to the urls
Revision
2371 -
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Modified
Mon Apr 6 11:48:32 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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missing citations and references added
Revision
2370 -
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Modified
Mon Apr 6 06:41:49 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some modifications to docu for MPI
Revision
2369 -
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Modified
Mon Apr 6 05:32:12 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some fixed for mpich2
Revision
2368 -
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Modified
Mon Apr 6 05:05:35 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some fixes for MKL and Mpisize>1
Revision
2367 -
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Modified
Mon Apr 6 04:51:49 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Added version number to deb files.
Fixed tests to check for ppmtompeg before running
Revision
2366 -
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Modified
Mon Apr 6 03:10:55 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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starter for MPICH and MPICH2 add
Revision
2365 -
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Modified
Mon Apr 6 01:25:25 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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all tests passed under scons on 4 mpi processes with openmpi on shake34
Revision
2364 -
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Modified
Fri Apr 3 08:06:30 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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MPI intel works now for the escript wrapper.
Revision
2363 -
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Modified
Fri Apr 3 03:56:19 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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scons should now be able to run tests under MPI and OpenMP
Revision
2362 -
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Modified
Fri Apr 3 02:41:14 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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escript wrapper does not use Compiled.with.*
Revision
2361 -
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Modified
Fri Apr 3 00:37:25 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Hopefully fixing the bad figures.
It turns out latex2html can not handle the optional angle= param in
\includegraphics
Revision
2360 -
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Modified
Thu Apr 2 04:12:12 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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AMG now checks how many elemens left. if n_F<500, then it does not coursen further.
Revision
2359 -
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Modified
Thu Apr 2 03:50:33 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Moved man page for easier testing.
Modified the wrapper script to take into account debian packaging.
This setting is recorded in the escript wrapper automatically by the package building script.
Revision
2358 -
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Modified
Wed Apr 1 22:25:24 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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mpi is not really ready yet.
Revision
2357 -
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Modified
Wed Apr 1 06:01:56 2009 UTC
(13 years, 1 month ago)
by
gross
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fixes to run escript command with SGI MPT
Revision
2356 -
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Modified
Wed Apr 1 04:46:22 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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more on escript command.
Revision
2355 -
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Modified
Wed Apr 1 04:08:28 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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intel MPI added.
Revision
2354 -
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Modified
Wed Apr 1 04:01:58 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some modifications to the Darcy flux solver to make it faster and more robust.
Revision
2353 -
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Modified
Wed Apr 1 01:49:47 2009 UTC
(13 years, 1 month ago)
by
artak
Original Path:
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AMG levels parameter moved to options file. Now one can set how many levels AMG will go in SetDefauls. Default value is 3.
Revision
2352 -
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Modified
Wed Apr 1 01:15:15 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Updated doco to reflect changed env variables
Revision
2351 -
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Modified
Tue Mar 31 08:26:41 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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some fixes in the transport solver
Revision
2350 -
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Modified
Tue Mar 31 08:26:05 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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more escript wrapper stuff
Revision
2349 -
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Modified
Mon Mar 30 08:14:23 2009 UTC
(13 years, 1 month ago)
by
gross
Original Path:
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first version of escript command: no MPI support yet.
Revision
2348 -
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Modified
Mon Mar 30 06:27:14 2009 UTC
(13 years, 1 month ago)
by
gross
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obsolet
Revision
2347 -
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Modified
Mon Mar 30 06:07:47 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Added windows notes to install guide.
Revision
2346 -
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Modified
Mon Mar 30 05:05:44 2009 UTC
(13 years, 1 month ago)
by
jfenwick
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Added instructions to test installations.
Revision
2345 -
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Modified
Mon Mar 30 04:44:06 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Added proper man page (with formatting and everything).
Updated package description.
Revision
2344 -
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Mon Mar 30 02:13:58 2009 UTC
(13 years, 1 month ago)
by
jfenwick
Original Path:
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Change __url__ to launchpad site