/[escript]/trunk-mpi-branch/finley/src/Assemble_PDE_System2_C.c
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Contents of /trunk-mpi-branch/finley/src/Assemble_PDE_System2_C.c

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Revision 1253 - (show annotations)
Fri Aug 17 04:09:29 2007 UTC (12 years, 9 months ago) by gross
File MIME type: text/plain
File size: 7943 byte(s)
finally everthing for MPI is in the code. now testing is needed
1 /*
2 ************************************************************
3 * Copyright 2006 by ACcESS MNRF *
4 * *
5 * http://www.access.edu.au *
6 * Primary Business: Queensland, Australia *
7 * Licensed under the Open Software License version 3.0 *
8 * http://www.opensource.org/licenses/osl-3.0.php *
9 * *
10 ************************************************************
11 */
12
13 /**************************************************************/
14
15 /* assembles the system of numEq PDEs into the stiffness matrix S right hand side F */
16
17 /* D_{k,m} u_m and Y_k */
18
19 /* u has p.numComp components in a 3D domain. The shape functions for test and solution must be identical */
20 /* and 2* row_NS == row_NN (contact elements) */
21
22 /* Shape of the coefficients: */
23
24 /* D = p.numEqu x p.numComp */
25 /* Y = p.numEqu */
26
27
28 /**************************************************************/
29
30 /* Author: gross@access.edu.au */
31 /* Version: $Id:$ */
32
33 /**************************************************************/
34
35
36 #include "Assemble.h"
37 #include "Util.h"
38 #ifdef _OPENMP
39 #include <omp.h>
40 #endif
41
42
43 /**************************************************************/
44
45 void Finley_Assemble_PDE_System2_C(Assemble_Parameters p, Finley_ElementFile* elements,
46 Paso_SystemMatrix* Mat, escriptDataC* F, escriptDataC* D, escriptDataC* Y) {
47
48 index_t color;
49 dim_t e;
50 double *EM_S, *EM_F, *Vol, *D_p, *Y_p;
51 index_t *row_index;
52 register dim_t q, s,r,k,m;
53 register double rtmp, rtmp_D;
54 bool_t add_EM_F, add_EM_S;
55
56 bool_t extendedD=isExpanded(D);
57 bool_t extendedY=isExpanded(Y);
58 double *F_p=getSampleData(F,0);
59 double *S=p.row_jac->ReferenceElement->S;
60
61
62 #pragma omp parallel private(color,EM_S, EM_F, Vol, D_p, Y_p,row_index,q, s,r,k,m,rtmp, rtmp_D,add_EM_F, add_EM_S)
63 {
64 EM_S=THREAD_MEMALLOC(p.row_NN*p.col_NN*p.numEqu*p.numComp,double);
65 EM_F=THREAD_MEMALLOC(p.row_NN*p.numEqu,double);
66 row_index=THREAD_MEMALLOC(p.row_NN,index_t);
67
68 if (!Finley_checkPtr(EM_S) && !Finley_checkPtr(EM_F) && !Finley_checkPtr(row_index) ) {
69
70 for (color=elements->minColor;color<=elements->maxColor;color++) {
71 /* open loop over all elements: */
72 #pragma omp for private(e) schedule(static)
73 for(e=0;e<elements->numElements;e++){
74 if (elements->Color[e]==color) {
75 Vol=&(p.row_jac->volume[INDEX2(0,e,p.numQuad)]);
76 add_EM_F=FALSE;
77 add_EM_S=FALSE;
78 /************************************************************* */
79 /* process D */
80 /**************************************************************/
81 D_p=getSampleData(D,e);
82 if (NULL!=D_p) {
83 add_EM_S=TRUE;
84 if (extendedD) {
85 for (s=0;s<p.row_NS;s++) {
86 for (r=0;r<p.col_NS;r++) {
87 for (k=0;k<p.numEqu;k++) {
88 for (m=0;m<p.numComp;m++) {
89 rtmp=0;
90 for (q=0;q<p.numQuad;q++) {
91 rtmp+=Vol[q]*S[INDEX2(s,q,p.row_NS)]*D_p[INDEX3(k,m,q,p.numEqu,p.numComp)]*S[INDEX2(r,q,p.row_NS)];
92 }
93 EM_S[INDEX4(k,m,s ,r ,p.numEqu,p.numComp,p.row_NN)]= rtmp;
94 EM_S[INDEX4(k,m,s ,r+p.col_NS,p.numEqu,p.numComp,p.row_NN)]=-rtmp;
95 EM_S[INDEX4(k,m,s+p.row_NS,r ,p.numEqu,p.numComp,p.row_NN)]=-rtmp;
96 EM_S[INDEX4(k,m,s+p.row_NS,r+p.col_NS,p.numEqu,p.numComp,p.row_NN)]= rtmp;
97 }
98 }
99 }
100 }
101 } else {
102 for (s=0;s<p.row_NS;s++) {
103 for (r=0;r<p.col_NS;r++) {
104 rtmp=0;
105 for (q=0;q<p.numQuad;q++) rtmp+=Vol[q]*S[INDEX2(s,q,p.row_NS)]*S[INDEX2(r,q,p.row_NS)];
106 for (k=0;k<p.numEqu;k++) {
107 for (m=0;m<p.numComp;m++) {
108 rtmp_D=rtmp*D_p[INDEX2(k,m,p.numEqu)];
109 EM_S[INDEX4(k,m,s ,r ,p.numEqu,p.numComp,p.row_NN)]= rtmp_D;
110 EM_S[INDEX4(k,m,s ,r+p.col_NS,p.numEqu,p.numComp,p.row_NN)]=-rtmp_D;
111 EM_S[INDEX4(k,m,s+p.row_NS,r ,p.numEqu,p.numComp,p.row_NN)]=-rtmp_D;
112 EM_S[INDEX4(k,m,s+p.row_NS,r+p.col_NS,p.numEqu,p.numComp,p.row_NN)]= rtmp_D;
113 }
114 }
115 }
116 }
117 }
118 }
119 /**************************************************************/
120 /* process Y: */
121 /**************************************************************/
122 Y_p=getSampleData(Y,e);
123 if (NULL!=Y_p) {
124 add_EM_F=TRUE;
125 if (extendedY) {
126 for (s=0;s<p.row_NS;s++) {
127 for (k=0;k<p.numEqu;k++) {
128 rtmp=0;
129 for (q=0;q<p.numQuad;q++) rtmp+=Vol[q]*S[INDEX2(s,q,p.row_NS)]*Y_p[INDEX2(k,q,p.numEqu)];
130 EM_F[INDEX2(k,s ,p.numEqu)]=-rtmp;
131 EM_F[INDEX2(k,s+p.row_NS,p.numEqu)]= rtmp;
132 }
133 }
134 } else {
135 for (s=0;s<p.row_NS;s++) {
136 rtmp=0;
137 for (q=0;q<p.numQuad;q++) rtmp+=Vol[q]*S[INDEX2(s,q,p.row_NS)];
138 for (k=0;k<p.numEqu;k++) {
139 rtmp_D=rtmp*Y_p[k];
140 EM_F[INDEX2(k,s ,p.numEqu)]=-rtmp_D;
141 EM_F[INDEX2(k,s+p.row_NS,p.numEqu)]= rtmp_D;
142 }
143 }
144 }
145 }
146 /***********************************************************************************************/
147 /* add the element matrices onto the matrix and right hand side */
148 /***********************************************************************************************/
149 for (q=0;q<p.row_NN;q++) row_index[q]=p.row_DOF[elements->Nodes[INDEX2(p.row_node[q],e,p.row_NN)]];
150 if (add_EM_F) Finley_Util_AddScatter(p.row_NN,row_index,p.numEqu,EM_F,F_p, p.row_DOF_UpperBound);
151 if (add_EM_S) Finley_Assemble_addToSystemMatrix(Mat,p.row_NN,row_index,p.numEqu,p.col_NN,row_index,p.numComp,EM_S);
152
153 } /* end color check */
154 } /* end element loop */
155 } /* end color loop */
156
157 THREAD_MEMFREE(EM_S);
158 THREAD_MEMFREE(EM_F);
159 THREAD_MEMFREE(row_index);
160
161 } /* end of pointer check */
162 } /* end parallel region */
163 }
164 /*
165 * $Log$
166 */

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