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revision 1756 by ksteube, Mon Sep 8 01:45:46 2008 UTC revision 3967 by jfenwick, Mon Sep 17 04:02:58 2012 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ########################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2012 by University of Queensland
4  #       Primary Business: Queensland, Australia  # Earth Systems Science Computational Center (ESSCC)
5  #  Licensed under the Open Software License version 3.0  # http://www.uq.edu.au/esscc
6  #     http://www.opensource.org/licenses/osl-3.0.php  #
7    # Primary Business: Queensland, Australia
8  EnsureSConsVersion(0,96,91)  # Licensed under the Open Software License version 3.0
9  EnsurePythonVersion(2,3)  # http://www.opensource.org/licenses/osl-3.0.php
10    #
11  import sys, os, re, socket  ########################################################
   
 # Add our extensions  
 if os.path.isdir('scons'): sys.path.append('scons')  
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
12    
13  # The string python2.4 or python2.5  EnsureSConsVersion(0,98,1)
14  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  EnsurePythonVersion(2,5)
15    
16  # MS Windows support, many thanks to PH  import sys, os, platform, re
17  IS_WINDOWS_PLATFORM = (os.name== "nt")  from distutils import sysconfig
18    from site_init import *
19    import subprocess
20    from subprocess import PIPE, Popen
21    
22    # Version number to check for in options file. Increment when new features are
23    # added or existing options changed.
24    REQUIRED_OPTS_VERSION=201
25    
26  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  # MS Windows support, many thanks to PH
27    IS_WINDOWS = (os.name == 'nt')
28    
29  # Read configuration options from file scons/<hostname>_options.py  ########################## Determine options file ############################
30  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  # 1. command line
31  tmp = os.path.join("scons",hostname+"_options.py")  # 2. scons/<hostname>_options.py
32  options_file = ARGUMENTS.get('options_file', tmp)  # 3. name as part of a cluster
33  if not os.path.isfile(options_file): options_file = False  options_file=ARGUMENTS.get('options_file', None)
34  else: print "Options file is", options_file  if not options_file:
35        ext_dir = os.path.join(os.getcwd(), 'scons')
36  # Load options file and command-line arguments      hostname = platform.node().split('.')[0]
37  opts = Options(options_file, ARGUMENTS)      for name in hostname, effectiveName(hostname):
38            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
39  ############ Load build options ################################          options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
40            if os.path.isfile(options_file): break
41  opts.AddOptions(  
42  # Where to install esys stuff  if not os.path.isfile(options_file):
43    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),      print("\nWARNING:\nOptions file %s" % options_file)
44    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),      print("not found! Default options will be used which is most likely suboptimal.")
45    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
46    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),      print("subdirectory and customize it to your needs.\n")
47    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),      options_file = None
48  # Compilation options  
49    BoolOption('dodebug', 'For backwards compatibility', 'no'),  ############################### Build options ################################
50    BoolOption('usedebug', 'Do you want a debug build?', 'no'),  
51    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),  default_prefix='/usr'
52    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
53    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below  lapack_flavours=('none', 'clapack', 'mkl')
54    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),  
55    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),  vars = Variables(options_file, ARGUMENTS)
56    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  vars.AddVariables(
57    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
58    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
59    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
60    ('cc_extra', 'Extra C/C++ flags', ''),    BoolVariable('verbose', 'Output full compile/link lines', False),
61    ('sys_libs', 'System libraries to link with', []),  # Compiler/Linker options
62    ('ar_flags', 'Static library archiver flags to use', ''),    ('cc', 'Path to C compiler', 'default'),
63    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
64    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'yes'),    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
65  # Python    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
66    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
67    ('python_lib_path', 'Path to Python libs', usr_lib),    ('cc_extra', 'Extra C compiler flags', ''),
68    ('python_libs', 'Python libraries to link with', [python_version]),    ('cxx_extra', 'Extra C++ compiler flags', ''),
69    ('python_cmd', 'Python command', 'python'),    ('ld_extra', 'Extra linker flags', ''),
70  # Boost    BoolVariable('werror','Treat compiler warnings as errors', True),
71    ('boost_path', 'Path to Boost includes', '/usr/include'),    BoolVariable('debug', 'Compile with debug flags', False),
72    ('boost_lib_path', 'Path to Boost libs', usr_lib),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
73    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    ('omp_flags', 'OpenMP compiler flags', 'default'),
74  # NetCDF    ('omp_ldflags', 'OpenMP linker flags', 'default'),
75    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),  # Mandatory libraries
76    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
77    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
78    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),  # Mandatory for tests
79  # MPI    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
80    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
81    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),  # Optional libraries and options
82    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
83    ('mpi_path', 'Path to MPI includes', '/usr/include'),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
84    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
85    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),    BoolVariable('netcdf', 'Enable netCDF file support', False),
86    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
87  # ParMETIS    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
88    BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
89    ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
90    ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
91    ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),    BoolVariable('papi', 'Enable PAPI', False),
92  # PAPI    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
93    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
94    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
95  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
96    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
97    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
98    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
99    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
100  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
101    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
102    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
103    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
104    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
105    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
106  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
107    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
108    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
109    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
110  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
111    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
112    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
113    ('blas_libs', 'BLAS libraries to link with', ['blas'])    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
114    # Advanced settings
115      #dudley_assemble_flags = -funroll-loops      to actually do something
116      ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
117      # To enable passing function pointers through python
118      BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
119      # An option for specifying the compiler tools (see windows branch)
120      ('tools_names', 'Compiler tools to use', ['default']),
121      ('env_export', 'Environment variables to be passed to tools',[]),
122      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124      # finer control over library building, intel aggressive global optimisation
125      # works with dynamic libraries on windows.
126      ('build_shared', 'Build dynamic libraries only', False),
127      ('sys_libs', 'Extra libraries to link with', []),
128      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
129      ('SVN_VERSION', 'Do not use from options file', -2),
130      ('pythoncmd', 'which python to compile with','python'),
131      ('usepython3', 'Is this a python3 build? (experimental)', False),
132      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
133      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
134      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
135      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
136  )  )
137    
138  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
139    
140  # intelc uses regular expressions improperly and emits a warning about  # Intel's compiler uses regular expressions improperly and emits a warning
141  # failing to find the compilers.  This warning can be safely ignored.  # about failing to find the compilers. This warning can be safely ignored.
142    
143  if IS_WINDOWS_PLATFORM:  # PATH is needed so the compiler, linker and tools are found if they are not
144        env = Environment(tools = ['default', 'msvc'], options = opts)  # in default locations.
145    env = Environment(tools = ['default'], options = vars,
146                      ENV = {'PATH': os.environ['PATH']})
147                      
148    
149    #set the vars for clang
150    def mkclang(env):
151      env['CC']='clang'
152      env['CXX']='clang++'
153                      
154                      
155    if env['tools_names'] != 'default':
156        zz=env['tools_names']
157        if 'clang' in zz:
158            zz.remove('clang')
159            zz.insert(0, mkclang)
160        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
161                          ENV = {'PATH' : os.environ['PATH']})
162    
163    if options_file:
164        opts_valid=False
165        if 'escript_opts_version' in env.Dictionary() and \
166            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
167                opts_valid=True
168        if opts_valid:
169            print("Using options in %s." % options_file)
170        else:
171            print("\nOptions file %s" % options_file)
172            print("is outdated! Please update the file by examining one of the TEMPLATE")
173            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
174            Exit(1)
175    
176    # Generate help text (scons -h)
177    Help(vars.GenerateHelpText(env))
178    
179    # Check for superfluous options
180    if len(vars.UnknownVariables())>0:
181        for k in vars.UnknownVariables():
182            print("Unknown option '%s'" % k)
183        Exit(1)
184    
185    #################### Make sure install directories exist #####################
186    
187    env['BUILD_DIR']=env['build_dir']
188    prefix=Dir(env['prefix']).abspath
189    env['incinstall'] = os.path.join(prefix, 'include')
190    env['bininstall'] = os.path.join(prefix, 'bin')
191    env['libinstall'] = os.path.join(prefix, 'lib')
192    env['pyinstall']  = os.path.join(prefix, 'esys')
193    if not os.path.isdir(env['bininstall']):
194        os.makedirs(env['bininstall'])
195    if not os.path.isdir(env['libinstall']):
196        os.makedirs(env['libinstall'])
197    if not os.path.isdir(env['pyinstall']):
198        os.makedirs(env['pyinstall'])
199    
200    env.Append(CPPPATH = [env['incinstall']])
201    env.Append(LIBPATH = [env['libinstall']])
202    
203    ################# Fill in compiler options if not set above ##################
204    
205    if env['cc'] != 'default': env['CC']=env['cc']
206    if env['cxx'] != 'default': env['CXX']=env['cxx']
207    
208    # version >=9 of intel C++ compiler requires use of icpc to link in C++
209    # runtimes (icc does not)
210    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
211        env['LINK'] = env['CXX']
212    
213    # default compiler/linker options
214    cc_flags = ''
215    cc_optim = ''
216    cc_debug = ''
217    omp_flags = ''
218    omp_ldflags = ''
219    fatalwarning = '' # switch to turn warnings into errors
220    sysheaderopt = '' # how to indicate that a header is a system header
221    
222    # env['CC'] might be a full path
223    cc_name=os.path.basename(env['CC'])
224    
225    if cc_name == 'icc':
226        # Intel compiler
227        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
228        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
229        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
230        omp_flags   = "-openmp -openmp_report0"
231        omp_ldflags = "-openmp -openmp_report0 -lpthread"
232        fatalwarning = "-Werror"
233    elif cc_name[:3] == 'gcc':
234        # GNU C on any system
235        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
236        cc_optim     = "-O3"
237        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
238        omp_flags    = "-fopenmp"
239        omp_ldflags  = "-fopenmp"
240        fatalwarning = "-Werror"
241        sysheaderopt = "-isystem"
242    elif cc_name == 'cl':
243        # Microsoft Visual C on Windows
244        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
245        cc_optim     = "/O2 /Op /W3"
246        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
247        fatalwarning = "/WX"
248    elif cc_name == 'icl':
249        # Intel C on Windows
250        cc_flags     = '/EHsc /GR /MD'
251        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
252        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
253        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
254        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
255    
256    # set defaults if not otherwise specified
257    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
258    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
259    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
260    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
261    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
262    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
263    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
264    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
265    
266    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
267    
268    if env['usepython3']:
269        env.Append(CPPDEFINES=['ESPYTHON3'])
270    
271    # set up the autolazy values
272    if env['forcelazy'] == 'on':
273        env.Append(CPPDEFINES=['FAUTOLAZYON'])
274    elif env['forcelazy'] == 'off':
275        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
276    
277    # set up the collective resolve values
278    if env['forcecollres'] == 'on':
279        env.Append(CPPDEFINES=['FRESCOLLECTON'])
280    elif env['forcecollres'] == 'off':
281        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
282    
283    # allow non-standard C if requested
284    if env['iknowwhatimdoing']:
285        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
286    
287    # Disable OpenMP if no flags provided
288    if env['openmp'] and env['omp_flags'] == '':
289       print("OpenMP requested but no flags provided - disabling OpenMP!")
290       env['openmp'] = False
291    
292    if env['openmp']:
293        env.Append(CCFLAGS = env['omp_flags'])
294        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
295  else:  else:
296     if socket.gethostname().split('.')[0] == 'service0':      env['omp_flags']=''
297        env = Environment(tools = ['default', 'intelc'], options = opts)      env['omp_ldflags']=''
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 ############ Fill in compiler options if not set above #########  
   
 # Backwards compatibility: allow dodebug=yes and useMPI=yes  
 if env['dodebug']: env['usedebug'] = 1  
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER"  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = "-pedantic-errors -Wno-long-long"  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
298    
299  try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  # add debug/non-debug compiler flags
300  except KeyError: pass  if env['debug']:
301        env.Append(CCFLAGS = env['cc_debug'])
302    else:
303        env.Append(CCFLAGS = env['cc_optim'])
304    
305  try: env['ENV']['HOME'] = os.environ['HOME']  # always add cc_flags
306  except KeyError: pass  env.Append(CCFLAGS = env['cc_flags'])
307    
308  # Configure for test suite  # add system libraries
309  env.PrependENVPath('PYTHONPATH', prefix)  env.AppendUnique(LIBS = env['sys_libs'])
 env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
310    
 env['ENV']['ESCRIPT_ROOT'] = prefix  
311    
312  ############ Set up paths for Configure() ######################  global_revision=ARGUMENTS.get('SVN_VERSION', None)
313    if global_revision:
314        global_revision = re.sub(':.*', '', global_revision)
315        global_revision = re.sub('[^0-9]', '', global_revision)
316        if global_revision == '': global_revision='-2'
317    else:
318      # Get the global Subversion revision number for the getVersion() method
319      try:
320        global_revision = os.popen('svnversion -n .').read()
321        global_revision = re.sub(':.*', '', global_revision)
322        global_revision = re.sub('[^0-9]', '', global_revision)
323        if global_revision == '': global_revision='-2'
324      except:
325        global_revision = '-1'
326    env['svn_revision']=global_revision
327    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
328    
329    if IS_WINDOWS:
330        if not env['build_shared']:
331            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
332            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
333    
334    ###################### Copy required environment vars ########################
335    
336    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
337    if IS_WINDOWS:
338        LD_LIBRARY_PATH_KEY='PATH'
339        env['ENV']['LD_LIBRARY_PATH']=''
340    else:
341        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
342    
343  # Make a copy of an environment  # the following env variables are exported for the unit tests
 # Use env.Clone if available, but fall back on env.Copy for older version of scons  
 def clone_env(env):  
   if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
   else:                   return env.Copy() # scons-0.96  
344    
345  # Add cc option -I<Escript>/trunk/include  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
346  env.Append(CPPPATH      = [Dir('include')])      try:
347            env['ENV'][key] = os.environ[key]
348        except KeyError:
349            env['ENV'][key] = 1
350    
351    env_export=env['env_export']
352    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
353    
354    for key in set(env_export):
355        try:
356            env['ENV'][key] = os.environ[key]
357        except KeyError:
358            pass
359    
360  # Add cc option -L<Escript>/trunk/lib  try:
361  env.Append(LIBPATH      = [Dir(env['libinstall'])])      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
362    except KeyError:
363        pass
364    
365    # these shouldn't be needed
366    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
367    #    try:
368    #        env['ENV'][key] = os.environ[key]
369    #    except KeyError:
370    #        pass
371    
372  env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])  try:
373        env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
374    except KeyError:
375        pass
376    
377  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  ######################## Add some custom builders ############################
378    
379  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  if env['pythoncmd']=='python':
380        py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
381    else:
382        py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
383    env.Append(BUILDERS = {'PyCompile' : py_builder});
384    
385  # MS Windows  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
386  if IS_WINDOWS_PLATFORM:  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
387    
388  env.Append(ARFLAGS = env['ar_flags'])  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
389    env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
390    
391  # Get the global Subversion revision number for getVersion() method  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
392  try:  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
    global_revision = os.popen("svnversion -n .").read()  
    global_revision = re.sub(":.*", "", global_revision)  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
393    
394  ############ numarray (required) ###############################  ############################ Dependency checks ###############################
395    
396  try:  # Create a Configure() environment to check for compilers and python
397    from numarray import identity  conf = Configure(env.Clone())
 except ImportError:  
   print "Cannot import numarray, you need to set your PYTHONPATH"  
   sys.exit(1)  
398    
399  ############ C compiler (required) #############################  ######## Test that the compilers work
400    
401    if 'CheckCC' in dir(conf): # exists since scons 1.1.0
402        if not conf.CheckCC():
403            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
404            Exit(1)
405        if not conf.CheckCXX():
406            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
407            Exit(1)
408    else:
409        if not conf.CheckFunc('printf', language='c'):
410            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
411            Exit(1)
412        if not conf.CheckFunc('printf', language='c++'):
413            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
414            Exit(1)
415    
416    if conf.CheckFunc('gethostname'):
417        conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
418    
419    ######## Python headers & library (required)
420    
421    #First we check to see if the config file has specified
422    ##Where to find the filae. Ideally, this should be automatic
423    #But we need to deal with the case where python is not in its INSTALL
424    #Directory
425    # Use the python scons is running
426    if env['pythoncmd']=='python':
427        python_inc_path=sysconfig.get_python_inc()
428        if IS_WINDOWS:
429            python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
430        elif env['PLATFORM']=='darwin':
431            python_lib_path=sysconfig.get_config_var('LIBPL')
432        else:
433            python_lib_path=sysconfig.get_config_var('LIBDIR')
434    
435        #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
436        if IS_WINDOWS:
437            python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
438        else:
439            python_libs=['python'+sysconfig.get_python_version()]
440    
441  # Create a Configure() environment for checking existence of required libraries and headers  #if we want to use a python other than the one scons is running
442  conf = Configure(clone_env(env))  else:
443        initstring='from __future__ import print_function;from distutils import sysconfig;'
444        if env['pythonlibname']!='':
445            python_libs=env['pythonlibname']
446        else:   # work it out by calling python    
447            if IS_WINDOWS:
448                cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
449            else:
450                cmd='print("python"+sysconfig.get_python_version())'
451            p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
452            python_libs=p.stdout.readline()
453            if env['usepython3']:       # This is to convert unicode str into py2 string
454                python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought
455            p.wait()
456            python_libs=python_libs.strip()
457    
458      
459        # Now we know whether we are using python3 or not
460        p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
461        python_inc_path=p.stdout.readline()
462        if env['usepython3']:
463             python_inc_path=python_inc_path.encode()
464        p.wait()  
465        python_inc_path=python_inc_path.strip()
466        if IS_WINDOWS:
467            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
468        elif env['PLATFORM']=='darwin':
469            cmd="sysconfig.get_config_var(\"LIBPL\")"
470        else:
471            cmd="sysconfig.get_config_var(\"LIBDIR\")"
472    
473        p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
474        python_lib_path=p.stdout.readline()
475        if env['usepython3']:
476            python_lib_path=python_lib_path.decode()
477        p.wait()
478        python_lib_path=python_lib_path.strip()
479    
480    #Check for an override from the config file.
481    #Ideally, this should be automatic
482    #But we need to deal with the case where python is not in its INSTALL
483    #Directory
484    if env['pythonlibpath']!='':
485        python_lib_path=env['pythonlibpath']
486    
487  # Test that the compiler is working  if env['pythonincpath']!='':
488  if not conf.CheckFunc('printf'):      python_inc_path=env['pythonincpath']
   print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  
   sys.exit(1)  
489    
 if not conf.CheckFunc('gethostname'):  
   env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
490    
491  ############ python libraries (required) #######################  if sysheaderopt == '':
492        conf.env.AppendUnique(CPPPATH = [python_inc_path])
493    else:
494        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
495    
496  conf.env.AppendUnique(CPPPATH       = [env['python_path']])  conf.env.AppendUnique(LIBPATH = [python_lib_path])
497  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  conf.env.AppendUnique(LIBS = python_libs)
498  conf.env.AppendUnique(LIBS      = [env['python_libs']])  # The wrapper script needs to find the libs
499    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
500    
501  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
502    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
503    sys.exit(1)      Exit(1)
504  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
505    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
506    sys.exit(1)      Exit(1)
507    
508  ############ boost (required) ##################################  ## reuse conf to check for numpy header (optional)
509    if env['usepython3']:
510  conf.env.AppendUnique(CPPPATH       = [env['boost_path']])      # FIXME: This is until we can work out how to make the checks in python 3
511  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])      conf.env['numpy_h']=False
512  conf.env.AppendUnique(LIBS      = [env['boost_libs']])  else:
513        if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
514  if not conf.CheckCXXHeader('boost/python.hpp'):          conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
515    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])          conf.env['numpy_h']=True
516    sys.exit(1)      else:
517  if not conf.CheckFunc('PyObject_SetAttr'):          conf.env['numpy_h']=False
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
518    
519  # Commit changes to environment  # Commit changes to environment
520  env = conf.Finish()  env = conf.Finish()
521    
522  ############ VTK (optional) ####################################  ######## boost (required)
523    
524  if env['usevtk']:  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
525    try:  if sysheaderopt == '':
526      import vtk      env.AppendUnique(CPPPATH = [boost_inc_path])
527      env['usevtk'] = 1  else:
528    except ImportError:      # This is required because we can't -isystem /usr/include since it breaks
529      env['usevtk'] = 0      # std includes
530        if os.path.normpath(boost_inc_path) == '/usr/include':
531            conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
532        else:
533            env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
534    
535    env.AppendUnique(LIBPATH = [boost_lib_path])
536    env.AppendUnique(LIBS = env['boost_libs'])
537    env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
538    
539    ######## numpy (required)
540    
541    if env['pythoncmd']=='python':
542        try:
543          from numpy import identity
544        except ImportError:
545          print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
546          Exit(1)
547    else:
548        p=subprocess.call([env['pythoncmd'],'-c','import numpy'])
549        if p!=0:
550          print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
551          Exit(1)
552    
553  # Add VTK to environment env if it was found  ######## CppUnit (required for tests)
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
554    
555  ############ NetCDF (optional) #################################  try:
556        cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
557        env.AppendUnique(CPPPATH = [cppunit_inc_path])
558        env.AppendUnique(LIBPATH = [cppunit_lib_path])
559        env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
560        env['cppunit']=True
561    except:
562        env['cppunit']=False
563    
564  conf = Configure(clone_env(env))  ######## netCDF (optional)
565    
566  if env['usenetcdf']:  netcdf_inc_path=''
567    conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  netcdf_lib_path=''
568    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  if env['netcdf']:
569    conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])      netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
570        env.AppendUnique(CPPPATH = [netcdf_inc_path])
571        env.AppendUnique(LIBPATH = [netcdf_lib_path])
572        env.AppendUnique(LIBS = env['netcdf_libs'])
573        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
574        env.Append(CPPDEFINES = ['USE_NETCDF'])
575    
576    ######## PAPI (optional)
577    
578    papi_inc_path=''
579    papi_lib_path=''
580    if env['papi']:
581        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
582        env.AppendUnique(CPPPATH = [papi_inc_path])
583        env.AppendUnique(LIBPATH = [papi_lib_path])
584        env.AppendUnique(LIBS = env['papi_libs'])
585        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
586        env.Append(CPPDEFINES = ['BLOCKPAPI'])
587    
588    ######## MKL (optional)
589    
590    mkl_inc_path=''
591    mkl_lib_path=''
592    if env['mkl']:
593        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
594        env.AppendUnique(CPPPATH = [mkl_inc_path])
595        env.AppendUnique(LIBPATH = [mkl_lib_path])
596        env.AppendUnique(LIBS = env['mkl_libs'])
597        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
598        env.Append(CPPDEFINES = ['MKL'])
599    
600    ######## UMFPACK (optional)
601    
602    umfpack_inc_path=''
603    umfpack_lib_path=''
604    if env['umfpack']:
605        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
606        env.AppendUnique(CPPPATH = [umfpack_inc_path])
607        env.AppendUnique(LIBPATH = [umfpack_lib_path])
608        env.AppendUnique(LIBS = env['umfpack_libs'])
609        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
610        env.Append(CPPDEFINES = ['UMFPACK'])
611    
612    ######## LAPACK (optional)
613    
614    if env['lapack']=='mkl' and not env['mkl']:
615        print("mkl_lapack requires MKL!")
616        Exit(1)
617    
618    env['uselapack'] = env['lapack']!='none'
619    lapack_inc_path=''
620    lapack_lib_path=''
621    if env['uselapack']:
622        header='clapack.h'
623        if env['lapack']=='mkl':
624            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
625            header='mkl_lapack.h'
626        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
627        env.AppendUnique(CPPPATH = [lapack_inc_path])
628        env.AppendUnique(LIBPATH = [lapack_lib_path])
629        env.AppendUnique(LIBS = env['lapack_libs'])
630        env.Append(CPPDEFINES = ['USE_LAPACK'])
631    
632    ######## Silo (optional)
633    
634    silo_inc_path=''
635    silo_lib_path=''
636    if env['silo']:
637        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
638        env.AppendUnique(CPPPATH = [silo_inc_path])
639        env.AppendUnique(LIBPATH = [silo_lib_path])
640        # Note that we do not add the libs since they are only needed for the
641        # weipa library and tools.
642        #env.AppendUnique(LIBS = [env['silo_libs']])
643    
644    ######## VSL random numbers (optional)
645    if env['vsl_random']:
646        env.Append(CPPDEFINES = ['MKLRANDOM'])
647    
648    ######## VisIt (optional)
649    
650    visit_inc_path=''
651    visit_lib_path=''
652    if env['visit']:
653        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
654        env.AppendUnique(CPPPATH = [visit_inc_path])
655        env.AppendUnique(LIBPATH = [visit_lib_path])
656    
657    ######## MPI (optional)
658    
659    if env['mpi']=='no':
660        env['mpi']='none'
661    
662    env['usempi'] = env['mpi']!='none'
663    mpi_inc_path=''
664    mpi_lib_path=''
665    if env['usempi']:
666        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
667        env.AppendUnique(CPPPATH = [mpi_inc_path])
668        env.AppendUnique(LIBPATH = [mpi_lib_path])
669        env.AppendUnique(LIBS = env['mpi_libs'])
670        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
671        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
672        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
673        # On the other hand MPT and OpenMPI don't define the latter so we have to
674        # do that here
675        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
676            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
677    
678    ######## BOOMERAMG (optional)
679    
680    if env['mpi'] == 'none': env['boomeramg'] = False
681    
682    boomeramg_inc_path=''
683    boomeramg_lib_path=''
684    if env['boomeramg']:
685        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
686        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
687        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
688        env.AppendUnique(LIBS = env['boomeramg_libs'])
689        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
690        env.Append(CPPDEFINES = ['BOOMERAMG'])
691    
692    ######## ParMETIS (optional)
693    
694    if not env['usempi']: env['parmetis'] = False
695    
696    parmetis_inc_path=''
697    parmetis_lib_path=''
698    if env['parmetis']:
699        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
700        env.AppendUnique(CPPPATH = [parmetis_inc_path])
701        env.AppendUnique(LIBPATH = [parmetis_lib_path])
702        env.AppendUnique(LIBS = env['parmetis_libs'])
703        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
704        env.Append(CPPDEFINES = ['USE_PARMETIS'])
705    
706  if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  ######## gmsh (optional, for tests)
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
707    
708  # Add NetCDF to environment env if it was found  try:
709  if env['usenetcdf']:      import subprocess
710    env = conf.Finish()      p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
711    env.Append(CPPDEFINES = ['USE_NETCDF'])      _,e=p.communicate()
712        if e.split().count("MPI"):
713            env['gmsh']='m'
714        else:
715            env['gmsh']='s'
716    except OSError:
717        env['gmsh']=False
718    
719    ######## PDFLaTeX (for documentation)
720    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
721        env['pdflatex']=True
722  else:  else:
723    conf.Finish()      env['pdflatex']=False
724    
725  ############ PAPI (optional) ###################################  ######################## Summarize our environment ###########################
726    
727  # Start a new configure environment that reflects what we've already found  # keep some of our install paths first in the list for the unit tests
728  conf = Configure(clone_env(env))  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
729    env.PrependENVPath('PYTHONPATH', prefix)
730  if env['usepapi']:  env['ENV']['ESCRIPT_ROOT'] = prefix
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   
 if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
731    
732  # Add PAPI to environment env if it was found  if not env['verbose']:
733  if env['usepapi']:      env['CCCOMSTR'] = "Compiling $TARGET"
734    env = conf.Finish()      env['CXXCOMSTR'] = "Compiling $TARGET"
735    env.Append(CPPDEFINES = ['BLOCKPAPI'])      env['SHCCCOMSTR'] = "Compiling $TARGET"
736        env['SHCXXCOMSTR'] = "Compiling $TARGET"
737        env['ARCOMSTR'] = "Linking $TARGET"
738        env['LINKCOMSTR'] = "Linking $TARGET"
739        env['SHLINKCOMSTR'] = "Linking $TARGET"
740        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
741        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
742        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
743        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
744        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
745    
746    print("")
747    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
748    print("Escript/Finley revision %s"%global_revision)
749    print("  Install prefix:  %s"%env['prefix'])
750    print("          Python:  %s"%sysconfig.PREFIX)
751    print("           boost:  %s"%env['boost_prefix'])
752    print("           numpy:  YES")
753    if env['usempi']:
754        print("             MPI:  YES (flavour: %s)"%env['mpi'])
755  else:  else:
756    conf.Finish()      print("             MPI:  DISABLED")
757    if env['uselapack']:
758  ############ MKL (optional) ####################################      print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usemkl']:  
   conf.env.AppendUnique(CPPPATH = [env['mkl_path']])  
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   
 if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
   
 # Add MKL to environment env if it was found  
 if env['usemkl']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['MKL'])  
759  else:  else:
760    conf.Finish()      print("          LAPACK:  DISABLED")
761    d_list=[]
762  ############ UMFPACK (optional) ################################  e_list=[]
763    for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':
764  # Start a new configure environment that reflects what we've already found      if env[i]: e_list.append(i)
765  conf = Configure(clone_env(env))      else: d_list.append(i)
766    for i in e_list:
767  if env['useumfpack']:      print("%16s:  YES"%i)
768    conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  for i in d_list:
769    conf.env.AppendUnique(CPPPATH = [env['umf_path']])      print("%16s:  DISABLED"%i)
770    conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  if env['cppunit']:
771    conf.env.AppendUnique(LIBS    = [env['umf_libs']])      print("         CppUnit:  FOUND")
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
   
 # Add UMFPACK to environment env if it was found  
 if env['useumfpack']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
772  else:  else:
773    conf.Finish()      print("         CppUnit:  NOT FOUND")
774    if env['gmsh']=='m':
775  ############ Add the compiler flags ############################      print("            gmsh:  FOUND, MPI-ENABLED")
776    elif env['gmsh']=='s':
777  # Enable debug by choosing either cc_debug or cc_optim      print("            gmsh:  FOUND")
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
778  else:  else:
779    env.Append(CCFLAGS        = env['cc_optim'])      print("            gmsh:  NOT FOUND")
780    env.Append(CCFLAGS        = env['omp_optim'])  if env['numpy_h']:
781        print("   numpy headers:  FOUND")
 # Always use cc_flags  
 env.Append(CCFLAGS      = env['cc_flags'])  
 env.Append(LIBS         = [env['omp_libs']])  
   
 ############ MPI (optional) ####################################  
   
 # Create a modified environment for MPI programs (identical to env if usempi=no)  
 env_mpi = clone_env(env)  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if env_mpi['usempi']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  
   
 if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
   
 # Add MPI to environment env_mpi if it was found  
 if env_mpi['usempi']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])  
782  else:  else:
783    conf.Finish()      print("   numpy headers:  NOT FOUND")
784    print("   vsl_random:  %s"%env['vsl_random'])
785  env['usempi'] = env_mpi['usempi']      
786    if ((fatalwarning != '') and (env['werror'])):
787  ############ ParMETIS (optional) ###############################      print("  Treating warnings as errors")
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  
   
 if env_mpi['useparmetis']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
   
 # Add ParMETIS to environment env_mpi if it was found  
 if env_mpi['useparmetis']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])  
788  else:  else:
789    conf.Finish()      print("  NOT treating warnings as errors")
790    print("")
 env['useparmetis'] = env_mpi['useparmetis']  
   
 ############ Summarize our environment #########################  
   
 print ""  
 print "Summary of configuration (see ./config.log for information)"  
 print " Using python libraries"  
 print " Using numarray"  
 print " Using boost"  
 if env['usenetcdf']: print "    Using NetCDF"  
 else: print "   Not using NetCDF"  
 if env['usevtk']: print "   Using VTK"  
 else: print "   Not using VTK"  
 if env['usemkl']: print "   Using MKL"  
 else: print "   Not using MKL"  
 if env['useumfpack']: print "   Using UMFPACK"  
 else: print "   Not using UMFPACK"  
 if env['useopenmp']: print "    Using OpenMP"  
 else: print "   Not using OpenMP"  
 if env['usempi']: print "   Using MPI"  
 else: print "   Not using MPI"  
 if env['useparmetis']: print "  Using ParMETIS"  
 else: print "   Not using ParMETIS (requires MPI)"  
 if env['usepapi']: print "  Using PAPI"  
 else: print "   Not using PAPI"  
 if env['usedebug']: print " Compiling for debug"  
 else: print "   Not compiling for debug"  
 print " Installing in", prefix  
 print ""  
791    
792  ############ Delete option-dependent files #####################  ####################### Configure the subdirectories #########################
793    
794  Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  from grouptest import *
 Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  
 if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  
795    
796  ############ Add some custom builders ##########################  TestGroups=[]
797    
798  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  # keep an environment without warnings-as-errors
799  env.Append(BUILDERS = {'PyCompile' : py_builder});  dodgy_env=env.Clone()
   
 runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
   
 runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  
 env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
800    
801  ############ Build the subdirectories ##########################  # now add warnings-as-errors flags. This needs to be done after configuration
802    # because the scons test files have warnings in them
803    if ((fatalwarning != '') and (env['werror'])):
804        env.Append(CCFLAGS = fatalwarning)
805    
806  Export(["env", "env_mpi", "clone_env"])  Export(
807      ['env',
808       'dodgy_env',
809       'IS_WINDOWS',
810       'TestGroups'
811      ]
812    )
813    
814  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
815  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
816  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
817  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
818  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
819  env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
820  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
821  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
822  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
823  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
824  env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
825    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
826    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
827    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
828    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
829    
830    
831    ######################## Populate the buildvars file #########################
832    
833    # remove obsolete file
834    if not env['usempi']:
835        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
836        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
837    
838    # Try to extract the boost version from version.hpp
839    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
840    boostversion='unknown'
841    try:
842        for line in boosthpp:
843            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
844            if ver:
845                boostversion=ver.group(1)
846    except StopIteration:
847        pass
848    boosthpp.close()
849    
850    
851    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
852    buildvars.write("svn_revision="+str(global_revision)+"\n")
853    buildvars.write("prefix="+prefix+"\n")
854    buildvars.write("cc="+env['CC']+"\n")
855    buildvars.write("cxx="+env['CXX']+"\n")
856    if env['pythoncmd']=='python':
857        buildvars.write("python="+sys.executable+"\n")
858        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
859    else:
860        buildvars.write("python="+env['pythoncmd']+"\n")
861        p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)
862        verstring=p.stdout.readline().strip()
863        p.wait()
864        buildvars.write("python_version="+verstring+"\n")
865    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
866    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
867    buildvars.write("boost_version="+boostversion+"\n")
868    buildvars.write("debug=%d\n"%int(env['debug']))
869    buildvars.write("openmp=%d\n"%int(env['openmp']))
870    buildvars.write("mpi=%s\n"%env['mpi'])
871    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
872    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
873    buildvars.write("lapack=%s\n"%env['lapack'])
874    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
875    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
876        buildvars.write("%s=%d\n"%(i, int(env[i])))
877        if env[i]:
878            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
879            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
880    buildvars.close()
881    
882  ############ Remember what optimizations we used ###############  ################### Targets to build and install libraries ###################
883    
884  remember_list = []  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
885    env.Alias('target_init', [target_init])
886    # delete buildvars upon cleanup
887    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
888    
889  if env['usedebug']:  # The headers have to be installed prior to build in order to satisfy
890    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  # #include <paso/Common.h>
891    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
892    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
893    
894  if env['usempi']:  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
895    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
896    
897  if env['omp_optim'] != '':  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
898    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
899    
900  env.Alias('remember_options', remember_list)  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
901    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
902    
903  ############ Targets to build and install libraries ############  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
904    env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
905    
906  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
907  env.Alias('target_init', [target_init])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
   
 # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  
 env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
908    
909  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
910  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
911    
912  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
913  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
914    
915  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
916  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
917    
918  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
919  build_all_list = []  build_all_list = []
920  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
921  build_all_list += ['build_paso']  build_all_list += ['build_paso']
922  build_all_list += ['build_escript']  build_all_list += ['build_escript']
923    build_all_list += ['build_pasowrap']
924    build_all_list += ['build_dudley']
925  build_all_list += ['build_finley']  build_all_list += ['build_finley']
926  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
927  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  build_all_list += ['build_weipa']
928    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
929    if env['usempi']:   build_all_list += ['build_pythonMPI']
930    build_all_list += ['build_escriptconvert']
931  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
932    
933  install_all_list = []  install_all_list = []
# Line 586  install_all_list += ['target_init'] Line 935  install_all_list += ['target_init']
935  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
936  install_all_list += ['install_paso']  install_all_list += ['install_paso']
937  install_all_list += ['install_escript']  install_all_list += ['install_escript']
938    install_all_list += ['install_pasowrap']
939    install_all_list += ['install_dudley']
940  install_all_list += ['install_finley']  install_all_list += ['install_finley']
941  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
942  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
943  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
944  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_downunder_py']
945  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  install_all_list += ['install_modellib_py']
946  install_all_list += ['remember_options']  install_all_list += ['install_pycad_py']
947    if env['usempi']:   install_all_list += ['install_pythonMPI']
948    install_all_list += ['install_escriptconvert']
949  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
950    
951  # Default target is install  # Default target is install
952  env.Default('install_all')  env.Default('install_all')
953    
954  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
955    
956  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  if not env['cppunit']:
957        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
958        env.Alias('run_tests', test_msg)
959    env.Alias('run_tests', ['install_all'])
960    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
961    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
962    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
963    
964    ##################### Targets to build the documentation #####################
965    
966    env.Alias('api_epydoc','install_all')
967    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
968    env.Alias('release_prep', ['docs', 'install_all'])
969    
970    if not IS_WINDOWS:
971        try:
972            utest=open('utest.sh','w')
973            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix))
974            for tests in TestGroups:
975                utest.write(tests.makeString())
976            utest.close()
977            Execute(Chmod('utest.sh', 0o755))
978            print("Generated utest.sh.")
979        except IOError:
980            print("Error attempting to write unittests file.")
981            Exit(1)
982    
983        # delete utest.sh upon cleanup
984        env.Clean('target_init', 'utest.sh')
985    
986        # Make sure that the escript wrapper is in place
987        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
988            print("Copying escript wrapper.")
989            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
990    

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