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revision 1708 by ksteube, Thu Aug 14 22:42:24 2008 UTC revision 3947 by caltinay, Wed Aug 22 23:19:10 2012 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ########################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2012 by University of Queensland
4  #       Primary Business: Queensland, Australia  # Earth Systems Science Computational Center (ESSCC)
5  #  Licensed under the Open Software License version 3.0  # http://www.uq.edu.au/esscc
6  #     http://www.opensource.org/licenses/osl-3.0.php  #
7    # Primary Business: Queensland, Australia
8  EnsureSConsVersion(0,96,91)  # Licensed under the Open Software License version 3.0
9  EnsurePythonVersion(2,3)  # http://www.opensource.org/licenses/osl-3.0.php
10    #
11  import sys, os, re, socket  ########################################################
   
 # Add our extensions  
 if os.path.isdir('scons'): sys.path.append('scons')  
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
12    
13  # The string python2.4 or python2.5  EnsureSConsVersion(0,98,1)
14  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  EnsurePythonVersion(2,5)
15    
16  # MS Windows support, many thanks to PH  import sys, os, platform, re
17  IS_WINDOWS_PLATFORM = (os.name== "nt")  from distutils import sysconfig
18    from site_init import *
19    import subprocess
20    from subprocess import PIPE, Popen
21    
22    # Version number to check for in options file. Increment when new features are
23    # added or existing options changed.
24    REQUIRED_OPTS_VERSION=201
25    
26  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  # MS Windows support, many thanks to PH
27    IS_WINDOWS = (os.name == 'nt')
28    
29  # Read configuration options from file scons/<hostname>_options.py  ########################## Determine options file ############################
30  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  # 1. command line
31  tmp = os.path.join("scons",hostname+"_options.py")  # 2. scons/<hostname>_options.py
32  options_file = ARGUMENTS.get('options_file', tmp)  # 3. name as part of a cluster
33  if not os.path.isfile(options_file): options_file = False  options_file=ARGUMENTS.get('options_file', None)
34  else: print "Options file is", options_file  if not options_file:
35        ext_dir = os.path.join(os.getcwd(), 'scons')
36  # Load options file and command-line arguments      hostname = platform.node().split('.')[0]
37  opts = Options(options_file, ARGUMENTS)      for name in hostname, effectiveName(hostname):
38            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
39  ############ Load build options ################################          options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
40            if os.path.isfile(options_file): break
41  opts.AddOptions(  
42  # Where to install esys stuff  if not os.path.isfile(options_file):
43    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),      print("\nWARNING:\nOptions file %s" % options_file)
44    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),      print("not found! Default options will be used which is most likely suboptimal.")
45    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
46    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),      print("subdirectory and customize it to your needs.\n")
47  # Compilation options      options_file = None
48    BoolOption('dodebug', 'For backwards compatibility', 'no'),  
49    BoolOption('usedebug', 'Do you want a debug build?', 'no'),  ############################### Build options ################################
50    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),  
51    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),  default_prefix='/usr'
52    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
53    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),  lapack_flavours=('none', 'clapack', 'mkl')
54    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),  
55    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  vars = Variables(options_file, ARGUMENTS)
56    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  vars.AddVariables(
57    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
58    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
59    ('cc_extra', 'Extra C/C++ flags', ''),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
60    ('sys_libs', 'System libraries to link with', []),    BoolVariable('verbose', 'Output full compile/link lines', False),
61    ('ar_flags', 'Static library archiver flags to use', ''),  # Compiler/Linker options
62    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    ('cc', 'Path to C compiler', 'default'),
63    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
64  # Python    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
65    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
66    ('python_lib_path', 'Path to Python libs', usr_lib),    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
67    ('python_libs', 'Python libraries to link with', [python_version]),    ('cc_extra', 'Extra C compiler flags', ''),
68    ('python_cmd', 'Python command', 'python'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
69  # Boost    ('ld_extra', 'Extra linker flags', ''),
70    ('boost_path', 'Path to Boost includes', '/usr/include'),    BoolVariable('werror','Treat compiler warnings as errors', True),
71    ('boost_lib_path', 'Path to Boost libs', usr_lib),    BoolVariable('debug', 'Compile with debug flags', False),
72    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
73  # NetCDF    ('omp_flags', 'OpenMP compiler flags', 'default'),
74    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
75    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),  # Mandatory libraries
76    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
77    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
78  # MPI  # Mandatory for tests
79    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
80    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
81    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),  # Optional libraries and options
82    ('mpi_path', 'Path to MPI includes', '/usr/include'),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
83    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
84    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
85    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),    BoolVariable('netcdf', 'Enable netCDF file support', False),
86  # ParMETIS    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
87    BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
88    ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
89    ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
90    ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
91  # PAPI    BoolVariable('papi', 'Enable PAPI', False),
92    BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
93    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
94    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
95  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
96    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
97    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
98    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
99    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
100  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
101    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
102    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
103    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
104    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
105    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
106  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
107    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
108    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
109    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
110  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
111    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
112    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
113    ('blas_libs', 'BLAS libraries to link with', ['blas'])    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
114    # Advanced settings
115      #dudley_assemble_flags = -funroll-loops      to actually do something
116      ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
117      # To enable passing function pointers through python
118      BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
119      # An option for specifying the compiler tools (see windows branch)
120      ('tools_names', 'Compiler tools to use', ['default']),
121      ('env_export', 'Environment variables to be passed to tools',[]),
122      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124      # finer control over library building, intel aggressive global optimisation
125      # works with dynamic libraries on windows.
126      ('build_shared', 'Build dynamic libraries only', False),
127      ('sys_libs', 'Extra libraries to link with', []),
128      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
129      ('SVN_VERSION', 'Do not use from options file', -2),
130      ('pythoncmd', 'which python to compile with','python'),
131      ('usepython3', 'Is this a python3 build? (experimental)', False),
132      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
133      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
134      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
135  )  )
136    
137  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
138    
139  # intelc uses regular expressions improperly and emits a warning about  # Intel's compiler uses regular expressions improperly and emits a warning
140  # failing to find the compilers.  This warning can be safely ignored.  # about failing to find the compilers. This warning can be safely ignored.
141    
142  if IS_WINDOWS_PLATFORM:  # PATH is needed so the compiler, linker and tools are found if they are not
143        env = Environment(tools = ['default', 'msvc'], options = opts)  # in default locations.
144    env = Environment(tools = ['default'], options = vars,
145                      ENV = {'PATH': os.environ['PATH']})
146    if env['tools_names'] != 'default':
147        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
148                          ENV = {'PATH' : os.environ['PATH']})
149    
150    if options_file:
151        opts_valid=False
152        if 'escript_opts_version' in env.Dictionary() and \
153            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
154                opts_valid=True
155        if opts_valid:
156            print("Using options in %s." % options_file)
157        else:
158            print("\nOptions file %s" % options_file)
159            print("is outdated! Please update the file by examining one of the TEMPLATE")
160            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
161            Exit(1)
162    
163    # Generate help text (scons -h)
164    Help(vars.GenerateHelpText(env))
165    
166    # Check for superfluous options
167    if len(vars.UnknownVariables())>0:
168        for k in vars.UnknownVariables():
169            print("Unknown option '%s'" % k)
170        Exit(1)
171    
172    #################### Make sure install directories exist #####################
173    
174    env['BUILD_DIR']=env['build_dir']
175    prefix=Dir(env['prefix']).abspath
176    env['incinstall'] = os.path.join(prefix, 'include')
177    env['bininstall'] = os.path.join(prefix, 'bin')
178    env['libinstall'] = os.path.join(prefix, 'lib')
179    env['pyinstall']  = os.path.join(prefix, 'esys')
180    if not os.path.isdir(env['bininstall']):
181        os.makedirs(env['bininstall'])
182    if not os.path.isdir(env['libinstall']):
183        os.makedirs(env['libinstall'])
184    if not os.path.isdir(env['pyinstall']):
185        os.makedirs(env['pyinstall'])
186    
187    env.Append(CPPPATH = [env['incinstall']])
188    env.Append(LIBPATH = [env['libinstall']])
189    
190    ################# Fill in compiler options if not set above ##################
191    
192    if env['cc'] != 'default': env['CC']=env['cc']
193    if env['cxx'] != 'default': env['CXX']=env['cxx']
194    
195    # version >=9 of intel C++ compiler requires use of icpc to link in C++
196    # runtimes (icc does not)
197    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
198        env['LINK'] = env['CXX']
199    
200    # default compiler/linker options
201    cc_flags = ''
202    cc_optim = ''
203    cc_debug = ''
204    omp_flags = ''
205    omp_ldflags = ''
206    fatalwarning = '' # switch to turn warnings into errors
207    sysheaderopt = '' # how to indicate that a header is a system header
208    
209    # env['CC'] might be a full path
210    cc_name=os.path.basename(env['CC'])
211    
212    if cc_name == 'icc':
213        # Intel compiler
214        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
215        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
216        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
217        omp_flags   = "-openmp -openmp_report0"
218        omp_ldflags = "-openmp -openmp_report0 -lpthread"
219        fatalwarning = "-Werror"
220    elif cc_name[:3] == 'gcc':
221        # GNU C on any system
222        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
223        cc_optim     = "-O3"
224        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
225        omp_flags    = "-fopenmp"
226        omp_ldflags  = "-fopenmp"
227        fatalwarning = "-Werror"
228        sysheaderopt = "-isystem"
229    elif cc_name == 'cl':
230        # Microsoft Visual C on Windows
231        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
232        cc_optim     = "/O2 /Op /W3"
233        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
234        fatalwarning = "/WX"
235    elif cc_name == 'icl':
236        # Intel C on Windows
237        cc_flags     = '/EHsc /GR /MD'
238        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
239        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
240        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
241        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
242    
243    # set defaults if not otherwise specified
244    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
245    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
246    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
247    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
248    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
249    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
250    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
251    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
252    
253    if env['usepython3']:
254        env.Append(CPPDEFINES=['ESPYTHON3'])
255    
256    # set up the autolazy values
257    if env['forcelazy'] == 'on':
258        env.Append(CPPDEFINES=['FAUTOLAZYON'])
259    elif env['forcelazy'] == 'off':
260        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
261    
262    # set up the collective resolve values
263    if env['forcecollres'] == 'on':
264        env.Append(CPPDEFINES=['FRESCOLLECTON'])
265    elif env['forcecollres'] == 'off':
266        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
267    
268    # allow non-standard C if requested
269    if env['iknowwhatimdoing']:
270        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
271    
272    # Disable OpenMP if no flags provided
273    if env['openmp'] and env['omp_flags'] == '':
274       print("OpenMP requested but no flags provided - disabling OpenMP!")
275       env['openmp'] = False
276    
277    if env['openmp']:
278        env.Append(CCFLAGS = env['omp_flags'])
279        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
280    else:
281        env['omp_flags']=''
282        env['omp_ldflags']=''
283    
284    # add debug/non-debug compiler flags
285    if env['debug']:
286        env.Append(CCFLAGS = env['cc_debug'])
287    else:
288        env.Append(CCFLAGS = env['cc_optim'])
289    
290    # always add cc_flags
291    env.Append(CCFLAGS = env['cc_flags'])
292    
293    # add system libraries
294    env.AppendUnique(LIBS = env['sys_libs'])
295    
296    
297    global_revision=ARGUMENTS.get('SVN_VERSION', None)
298    if global_revision:
299        global_revision = re.sub(':.*', '', global_revision)
300        global_revision = re.sub('[^0-9]', '', global_revision)
301        if global_revision == '': global_revision='-2'
302  else:  else:
303     if socket.gethostname().split('.')[0] == 'service0':    # Get the global Subversion revision number for the getVersion() method
304        env = Environment(tools = ['default', 'intelc'], options = opts)    try:
305     elif os.uname()[4]=='ia64':      global_revision = os.popen('svnversion -n .').read()
306        env = Environment(tools = ['default', 'intelc'], options = opts)      global_revision = re.sub(':.*', '', global_revision)
307        if env['CXX'] == 'icpc':      global_revision = re.sub('[^0-9]', '', global_revision)
308           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)      if global_revision == '': global_revision='-2'
309     else:    except:
310        env = Environment(tools = ['default'], options = opts)      global_revision = '-1'
311  Help(opts.GenerateHelpText(env))  env['svn_revision']=global_revision
312    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
313  ############ Fill in compiler options if not set above #########  
314    if IS_WINDOWS:
315  # Backwards compatibility: allow dodebug=yes and useMPI=yes      if not env['build_shared']:
316  if env['dodebug']: env['usedebug'] = 1          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
317  if env['useMPI']: env['usempi'] = 1          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
318    
319  # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  ###################### Copy required environment vars ########################
320  # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
321    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
322  if env["CC"] == "icc":  if IS_WINDOWS:
323    # Intel compilers      LD_LIBRARY_PATH_KEY='PATH'
324    cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"      env['ENV']['LD_LIBRARY_PATH']=''
325    cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  else:
326    cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"      LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
327    omp_optim     = "-openmp -openmp_report0"  
328    omp_debug     = "-openmp -openmp_report0"  # the following env variables are exported for the unit tests
329    omp_libs      = ['guide', 'pthread']  
330    pedantic      = ""  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
331  elif env["CC"] == "gcc":      try:
332    # GNU C on any system          env['ENV'][key] = os.environ[key]
333    cc_flags      = "-fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER"      except KeyError:
334    cc_optim      = "-O3"          env['ENV'][key] = 1
335    cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
336    omp_optim     = ""  env_export=env['env_export']
337    omp_debug     = ""  env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
338    omp_libs      = []  
339    pedantic      = "-pedantic-errors -Wno-long-long"  for key in set(env_export):
340  elif env["CC"] == "cl":      try:
341    # Microsoft Visual C on Windows          env['ENV'][key] = os.environ[key]
342    cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"      except KeyError:
343    cc_optim      = "/O2 /Op /MT /W3"          pass
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
   
 try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
 except KeyError: pass  
   
 try: env['ENV']['HOME'] = os.environ['HOME']  
 except KeyError: pass  
   
 # Configure for test suite  
 env.PrependENVPath('PYTHONPATH', prefix)  
 env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 ############ Set up paths for Configure() ######################  
   
 # Make a copy of an environment  
 # Use env.Clone if available, but fall back on env.Copy for older version of scons  
 def clone_env(env):  
   if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
   else:                   return env.Copy() # scons-0.96  
   
 # Add cc option -I<Escript>/trunk/include  
 env.Append(CPPPATH      = [Dir('include')])  
   
 # Add cc option -L<Escript>/trunk/lib  
 env.Append(LIBPATH      = [Dir('lib')])  
   
 env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])  
   
 if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  
   
 if env['usepedantic']: env.Append(CCFLAGS = pedantic)  
   
 # MS Windows  
 if IS_WINDOWS_PLATFORM:  
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
344    
345  env.Append(ARFLAGS = env['ar_flags'])  try:
346        env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
347    except KeyError:
348        pass
349    
350    # these shouldn't be needed
351    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
352    #    try:
353    #        env['ENV'][key] = os.environ[key]
354    #    except KeyError:
355    #        pass
356    
 # Get the global Subversion revision number for getVersion() method  
357  try:  try:
358     global_revision = os.popen("svnversion -n .").read()      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
359     global_revision = re.sub(":.*", "", global_revision)  except KeyError:
360     global_revision = re.sub("[^0-9]", "", global_revision)      pass
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
361    
362  ############ numarray (required) ###############################  ######################## Add some custom builders ############################
363    
364  try:  if env['pythoncmd']=='python':
365    from numarray import identity      py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
366  except ImportError:  else:
367    print "Cannot import numarray, you need to set your PYTHONPATH"      py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
368    sys.exit(1)  env.Append(BUILDERS = {'PyCompile' : py_builder});
369    
370  ############ C compiler (required) #############################  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
371    env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
372    
373  # Create a Configure() environment for checking existence of required libraries and headers  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
374  conf = Configure(clone_env(env))  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
375    
376  # Test that the compiler is working  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
377  if not conf.CheckFunc('printf'):  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
   print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  
   sys.exit(1)  
378    
379  if not conf.CheckFunc('gethostname'):  ############################ Dependency checks ###############################
   env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
380    
381  ############ python libraries (required) #######################  # Create a Configure() environment to check for compilers and python
382    conf = Configure(env.Clone())
383    
384  conf.env.AppendUnique(CPPPATH       = [env['python_path']])  ######## Test that the compilers work
385  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  
386  conf.env.AppendUnique(LIBS      = [env['python_libs']])  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
387        if not conf.CheckCC():
388            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
389            Exit(1)
390        if not conf.CheckCXX():
391            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
392            Exit(1)
393    else:
394        if not conf.CheckFunc('printf', language='c'):
395            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
396            Exit(1)
397        if not conf.CheckFunc('printf', language='c++'):
398            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
399            Exit(1)
400    
401    if conf.CheckFunc('gethostname'):
402        conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
403    
404    ######## Python headers & library (required)
405    
406    #First we check to see if the config file has specified
407    ##Where to find the filae. Ideally, this should be automatic
408    #But we need to deal with the case where python is not in its INSTALL
409    #Directory
410    # Use the python scons is running
411    if env['pythoncmd']=='python':
412        python_inc_path=sysconfig.get_python_inc()
413        if IS_WINDOWS:
414            python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
415        elif env['PLATFORM']=='darwin':
416            python_lib_path=sysconfig.get_config_var('LIBPL')
417        else:
418            python_lib_path=sysconfig.get_config_var('LIBDIR')
419    
420        #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
421        if IS_WINDOWS:
422            python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
423        else:
424            python_libs=['python'+sysconfig.get_python_version()]
425    
426    #if we want to use a python other than the one scons is running
427    else:
428        initstring='from __future__ import print_function;from distutils import sysconfig;'
429        if env['pythonlibname']!='':
430            python_libs=env['pythonlibname']
431        else:   # work it out by calling python    
432            if IS_WINDOWS:
433                cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
434            else:
435                cmd='print("python"+sysconfig.get_python_version())'
436            p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
437            python_libs=p.stdout.readline()
438            if env['usepython3']:       # This is to convert unicode str into py2 string
439                python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought
440            p.wait()
441            python_libs=python_libs.strip()
442    
443      
444        # Now we know whether we are using python3 or not
445        p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
446        python_inc_path=p.stdout.readline()
447        if env['usepython3']:
448             python_inc_path=python_inc_path.encode()
449        p.wait()  
450        python_inc_path=python_inc_path.strip()
451        if IS_WINDOWS:
452            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
453        elif env['PLATFORM']=='darwin':
454            cmd="sysconfig.get_config_var(\"LIBPL\")"
455        else:
456            cmd="sysconfig.get_config_var(\"LIBDIR\")"
457    
458        p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
459        python_lib_path=p.stdout.readline()
460        if env['usepython3']:
461            python_lib_path=python_lib_path.decode()
462        p.wait()
463        python_lib_path=python_lib_path.strip()
464    
465    #Check for an override from the config file.
466    #Ideally, this should be automatic
467    #But we need to deal with the case where python is not in its INSTALL
468    #Directory
469    if env['pythonlibpath']!='':
470        python_lib_path=env['pythonlibpath']
471    
472    if env['pythonincpath']!='':
473        python_inc_path=env['pythonincpath']
474    
475    
476    if sysheaderopt == '':
477        conf.env.AppendUnique(CPPPATH = [python_inc_path])
478    else:
479        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
480    
481    conf.env.AppendUnique(LIBPATH = [python_lib_path])
482    conf.env.AppendUnique(LIBS = python_libs)
483    # The wrapper script needs to find the libs
484    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
485    
486  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
487    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
488    sys.exit(1)      Exit(1)
489  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
490    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
491    sys.exit(1)      Exit(1)
492    
493  ############ boost (required) ##################################  ## reuse conf to check for numpy header (optional)
494    if env['usepython3']:
495  conf.env.AppendUnique(CPPPATH       = [env['boost_path']])      # FIXME: This is until we can work out how to make the checks in python 3
496  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])      conf.env['numpy_h']=False
497  conf.env.AppendUnique(LIBS      = [env['boost_libs']])  else:
498        if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
499  if not conf.CheckCXXHeader('boost/python.hpp'):          conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
500    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])          conf.env['numpy_h']=True
501    sys.exit(1)      else:
502  if not conf.CheckFunc('PyObject_SetAttr'):          conf.env['numpy_h']=False
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
503    
504  # Commit changes to environment  # Commit changes to environment
505  env = conf.Finish()  env = conf.Finish()
506    
507  ############ VTK (optional) ####################################  ######## boost (required)
   
 if env['usevtk']:  
   try:  
     import vtk  
     env['usevtk'] = 1  
   except ImportError:  
     env['usevtk'] = 0  
   
 # Add VTK to environment env if it was found  
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
   
 ############ NetCDF (optional) #################################  
   
 conf = Configure(clone_env(env))  
   
 if env['usenetcdf']:  
   conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
   conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])  
   
 if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
   
 # Add NetCDF to environment env if it was found  
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
 else:  
   conf.Finish()  
   
 ############ PAPI (optional) ###################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usepapi']:  
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   
 if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
   
 # Add PAPI to environment env if it was found  
 if env['usepapi']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['BLOCKPAPI'])  
 else:  
   conf.Finish()  
508    
509  ############ MKL (optional) ####################################  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
510    if sysheaderopt == '':
511  # Start a new configure environment that reflects what we've already found      env.AppendUnique(CPPPATH = [boost_inc_path])
512  conf = Configure(clone_env(env))  else:
513        # This is required because we can't -isystem /usr/include since it breaks
514  if env['usemkl']:      # std includes
515    conf.env.AppendUnique(CPPPATH = [env['mkl_path']])      if os.path.normpath(boost_inc_path) == '/usr/include':
516    conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])          conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
517    conf.env.AppendUnique(LIBS    = [env['mkl_libs']])      else:
518            env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
519  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  
520  if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  env.AppendUnique(LIBPATH = [boost_lib_path])
521    env.AppendUnique(LIBS = env['boost_libs'])
522  # Add MKL to environment env if it was found  env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
523  if env['usemkl']:  
524    env = conf.Finish()  ######## numpy (required)
525    env.Append(CPPDEFINES = ['MKL'])  
526  else:  if env['pythoncmd']=='python':
527    conf.Finish()      try:
528          from numpy import identity
529        except ImportError:
530          print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
531          Exit(1)
532    else:
533        p=subprocess.call([env['pythoncmd'],'-c','import numpy'])
534        if p!=0:
535          print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
536          Exit(1)
537    
538  ############ UMFPACK (optional) ################################  ######## CppUnit (required for tests)
539    
540  # Start a new configure environment that reflects what we've already found  try:
541  conf = Configure(clone_env(env))      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
542        env.AppendUnique(CPPPATH = [cppunit_inc_path])
543  if env['useumfpack']:      env.AppendUnique(LIBPATH = [cppunit_lib_path])
544    conf.env.AppendUnique(CPPPATH = [env['ufc_path']])      env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
545    conf.env.AppendUnique(CPPPATH = [env['umf_path']])      env['cppunit']=True
546    conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  except:
547    conf.env.AppendUnique(LIBS    = [env['umf_libs']])      env['cppunit']=False
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
   
 # Add UMFPACK to environment env if it was found  
 if env['useumfpack']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
 else:  
   conf.Finish()  
   
 ############ Add the compiler flags ############################  
   
 # Enable debug by choosing either cc_debug or cc_optim  
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
 else:  
   env.Append(CCFLAGS        = env['cc_optim'])  
   env.Append(CCFLAGS        = env['omp_optim'])  
   
 # Always use cc_flags  
 env.Append(CCFLAGS      = env['cc_flags'])  
 env.Append(LIBS         = [env['omp_libs']])  
   
 ############ MPI (optional) ####################################  
   
 # Create a modified environment for MPI programs (identical to env if usempi=no)  
 env_mpi = clone_env(env)  
548    
549  # Start a new configure environment that reflects what we've already found  ######## netCDF (optional)
 conf = Configure(clone_env(env_mpi))  
550    
551  if env_mpi['usempi']:  netcdf_inc_path=''
552    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  netcdf_lib_path=''
553    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  if env['netcdf']:
554    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])      netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
555        env.AppendUnique(CPPPATH = [netcdf_inc_path])
556        env.AppendUnique(LIBPATH = [netcdf_lib_path])
557        env.AppendUnique(LIBS = env['netcdf_libs'])
558        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
559        env.Append(CPPDEFINES = ['USE_NETCDF'])
560    
561    ######## PAPI (optional)
562    
563    papi_inc_path=''
564    papi_lib_path=''
565    if env['papi']:
566        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
567        env.AppendUnique(CPPPATH = [papi_inc_path])
568        env.AppendUnique(LIBPATH = [papi_lib_path])
569        env.AppendUnique(LIBS = env['papi_libs'])
570        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
571        env.Append(CPPDEFINES = ['BLOCKPAPI'])
572    
573    ######## MKL (optional)
574    
575    mkl_inc_path=''
576    mkl_lib_path=''
577    if env['mkl']:
578        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
579        env.AppendUnique(CPPPATH = [mkl_inc_path])
580        env.AppendUnique(LIBPATH = [mkl_lib_path])
581        env.AppendUnique(LIBS = env['mkl_libs'])
582        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
583        env.Append(CPPDEFINES = ['MKL'])
584    
585    ######## UMFPACK (optional)
586    
587    umfpack_inc_path=''
588    umfpack_lib_path=''
589    if env['umfpack']:
590        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
591        env.AppendUnique(CPPPATH = [umfpack_inc_path])
592        env.AppendUnique(LIBPATH = [umfpack_lib_path])
593        env.AppendUnique(LIBS = env['umfpack_libs'])
594        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
595        env.Append(CPPDEFINES = ['UMFPACK'])
596    
597    ######## LAPACK (optional)
598    
599    if env['lapack']=='mkl' and not env['mkl']:
600        print("mkl_lapack requires MKL!")
601        Exit(1)
602    
603    env['uselapack'] = env['lapack']!='none'
604    lapack_inc_path=''
605    lapack_lib_path=''
606    if env['uselapack']:
607        header='clapack.h'
608        if env['lapack']=='mkl':
609            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
610            header='mkl_lapack.h'
611        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
612        env.AppendUnique(CPPPATH = [lapack_inc_path])
613        env.AppendUnique(LIBPATH = [lapack_lib_path])
614        env.AppendUnique(LIBS = env['lapack_libs'])
615        env.Append(CPPDEFINES = ['USE_LAPACK'])
616    
617    ######## Silo (optional)
618    
619    silo_inc_path=''
620    silo_lib_path=''
621    if env['silo']:
622        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
623        env.AppendUnique(CPPPATH = [silo_inc_path])
624        env.AppendUnique(LIBPATH = [silo_lib_path])
625        # Note that we do not add the libs since they are only needed for the
626        # weipa library and tools.
627        #env.AppendUnique(LIBS = [env['silo_libs']])
628    
629    ######## VSL random numbers (optional)
630    if env['vsl_random']:
631        env.Append(CPPDEFINES = ['MKLRANDOM'])
632    
633    ######## VisIt (optional)
634    
635    visit_inc_path=''
636    visit_lib_path=''
637    if env['visit']:
638        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
639        env.AppendUnique(CPPPATH = [visit_inc_path])
640        env.AppendUnique(LIBPATH = [visit_lib_path])
641    
642    ######## MPI (optional)
643    
644    if env['mpi']=='no':
645        env['mpi']='none'
646    
647    env['usempi'] = env['mpi']!='none'
648    mpi_inc_path=''
649    mpi_lib_path=''
650    if env['usempi']:
651        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
652        env.AppendUnique(CPPPATH = [mpi_inc_path])
653        env.AppendUnique(LIBPATH = [mpi_lib_path])
654        env.AppendUnique(LIBS = env['mpi_libs'])
655        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
656        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
657        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
658        # On the other hand MPT and OpenMPI don't define the latter so we have to
659        # do that here
660        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
661            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
662    
663    ######## BOOMERAMG (optional)
664    
665    if env['mpi'] == 'none': env['boomeramg'] = False
666    
667    boomeramg_inc_path=''
668    boomeramg_lib_path=''
669    if env['boomeramg']:
670        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
671        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
672        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
673        env.AppendUnique(LIBS = env['boomeramg_libs'])
674        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
675        env.Append(CPPDEFINES = ['BOOMERAMG'])
676    
677    ######## ParMETIS (optional)
678    
679    if not env['usempi']: env['parmetis'] = False
680    
681    parmetis_inc_path=''
682    parmetis_lib_path=''
683    if env['parmetis']:
684        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
685        env.AppendUnique(CPPPATH = [parmetis_inc_path])
686        env.AppendUnique(LIBPATH = [parmetis_lib_path])
687        env.AppendUnique(LIBS = env['parmetis_libs'])
688        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
689        env.Append(CPPDEFINES = ['USE_PARMETIS'])
690    
691  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  ######## gmsh (optional, for tests)
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
692    
693  # Add MPI to environment env_mpi if it was found  try:
694  if env_mpi['usempi']:      import subprocess
695    env_mpi = conf.Finish()      p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
696    env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])      _,e=p.communicate()
697        if e.split().count("MPI"):
698            env['gmsh']='m'
699        else:
700            env['gmsh']='s'
701    except OSError:
702        env['gmsh']=False
703    
704    ######## PDFLaTeX (for documentation)
705    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
706        env['pdflatex']=True
707  else:  else:
708    conf.Finish()      env['pdflatex']=False
   
 env['usempi'] = env_mpi['usempi']  
   
 ############ ParMETIS (optional) ###############################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
709    
710  if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  ######################## Summarize our environment ###########################
711    
712  if env_mpi['useparmetis']:  # keep some of our install paths first in the list for the unit tests
713    conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
714    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  env.PrependENVPath('PYTHONPATH', prefix)
715    conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  env['ENV']['ESCRIPT_ROOT'] = prefix
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
716    
717  # Add ParMETIS to environment env_mpi if it was found  if not env['verbose']:
718  if env_mpi['useparmetis']:      env['CCCOMSTR'] = "Compiling $TARGET"
719    env_mpi = conf.Finish()      env['CXXCOMSTR'] = "Compiling $TARGET"
720    env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])      env['SHCCCOMSTR'] = "Compiling $TARGET"
721        env['SHCXXCOMSTR'] = "Compiling $TARGET"
722        env['ARCOMSTR'] = "Linking $TARGET"
723        env['LINKCOMSTR'] = "Linking $TARGET"
724        env['SHLINKCOMSTR'] = "Linking $TARGET"
725        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
726        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
727        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
728        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
729        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
730    
731    print("")
732    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
733    print("Escript/Finley revision %s"%global_revision)
734    print("  Install prefix:  %s"%env['prefix'])
735    print("          Python:  %s"%sysconfig.PREFIX)
736    print("           boost:  %s"%env['boost_prefix'])
737    print("           numpy:  YES")
738    if env['usempi']:
739        print("             MPI:  YES (flavour: %s)"%env['mpi'])
740  else:  else:
741    conf.Finish()      print("             MPI:  DISABLED")
742    if env['uselapack']:
743  env['useparmetis'] = env_mpi['useparmetis']      print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
744    else:
745  ############ Summarize our environment #########################      print("          LAPACK:  DISABLED")
746    d_list=[]
747  print ""  e_list=[]
748  print "Summary of configuration (see ./config.log for information)"  for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':
749  print " Using python libraries"      if env[i]: e_list.append(i)
750  print " Using numarray"      else: d_list.append(i)
751  print " Using boost"  for i in e_list:
752  if env['usenetcdf']: print "    Using NetCDF"      print("%16s:  YES"%i)
753  else: print "   Not using NetCDF"  for i in d_list:
754  if env['usevtk']: print "   Using VTK"      print("%16s:  DISABLED"%i)
755  else: print "   Not using VTK"  if env['cppunit']:
756  if env['usemkl']: print "   Using MKL"      print("         CppUnit:  FOUND")
757  else: print "   Not using MKL"  else:
758  if env['useumfpack']: print "   Using UMFPACK"      print("         CppUnit:  NOT FOUND")
759  else: print "   Not using UMFPACK"  if env['gmsh']=='m':
760  if env['useopenmp']: print "    Using OpenMP"      print("            gmsh:  FOUND, MPI-ENABLED")
761  else: print "   Not using OpenMP"  elif env['gmsh']=='s':
762  if env['usempi']: print "   Using MPI"      print("            gmsh:  FOUND")
763  else: print "   Not using MPI"  else:
764  if env['useparmetis']: print "  Using ParMETIS"      print("            gmsh:  NOT FOUND")
765  else: print "   Not using ParMETIS (requires MPI)"  if env['numpy_h']:
766  if env['usepapi']: print "  Using PAPI"      print("   numpy headers:  FOUND")
767  else: print "   Not using PAPI"  else:
768  if env['usedebug']: print " Compiling for debug"      print("   numpy headers:  NOT FOUND")
769  else: print "   Not compiling for debug"  print("   vsl_random:  %s"%env['vsl_random'])
770  print " Installing in", prefix      
771  print ""  if ((fatalwarning != '') and (env['werror'])):
772        print("  Treating warnings as errors")
773  ############ Add some custom builders ##########################  else:
774        print("  NOT treating warnings as errors")
775  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  print("")
776  env.Append(BUILDERS = {'PyCompile' : py_builder});  
777    ####################### Configure the subdirectories #########################
778  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  
779  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  from grouptest import *
780    
781  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  TestGroups=[]
782  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
783    # keep an environment without warnings-as-errors
784  ############ Build the desired subdirectories ##################  dodgy_env=env.Clone()
785    
786  Export(["env", "env_mpi", "clone_env"])  # now add warnings-as-errors flags. This needs to be done after configuration
787    # because the scons test files have warnings in them
788  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  if ((fatalwarning != '') and (env['werror'])):
789  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)      env.Append(CCFLAGS = fatalwarning)
790  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
791  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  Export(
792  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)    ['env',
793  env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)     'dodgy_env',
794  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)     'IS_WINDOWS',
795  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)     'TestGroups'
796  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)    ]
797  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  )
798    
799  ############ Remember what optimizations we used ###############  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
800    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
801    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
802    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
803    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
804    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
805    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
806    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
807    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
808    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
809    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
810    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
811    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
812    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
813    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
814    
815    
816    ######################## Populate the buildvars file #########################
817    
818    # remove obsolete file
819    if not env['usempi']:
820        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
821        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
822    
823    # Try to extract the boost version from version.hpp
824    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
825    boostversion='unknown'
826    try:
827        for line in boosthpp:
828            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
829            if ver:
830                boostversion=ver.group(1)
831    except StopIteration:
832        pass
833    boosthpp.close()
834    
835    
836    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
837    buildvars.write("svn_revision="+str(global_revision)+"\n")
838    buildvars.write("prefix="+prefix+"\n")
839    buildvars.write("cc="+env['CC']+"\n")
840    buildvars.write("cxx="+env['CXX']+"\n")
841    if env['pythoncmd']=='python':
842        buildvars.write("python="+sys.executable+"\n")
843        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
844    else:
845        buildvars.write("python="+env['pythoncmd']+"\n")
846        p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)
847        verstring=p.stdout.readline().strip()
848        p.wait()
849        buildvars.write("python_version="+verstring+"\n")
850    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
851    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
852    buildvars.write("boost_version="+boostversion+"\n")
853    buildvars.write("debug=%d\n"%int(env['debug']))
854    buildvars.write("openmp=%d\n"%int(env['openmp']))
855    buildvars.write("mpi=%s\n"%env['mpi'])
856    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
857    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
858    buildvars.write("lapack=%s\n"%env['lapack'])
859    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
860    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
861        buildvars.write("%s=%d\n"%(i, int(env[i])))
862        if env[i]:
863            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
864            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
865    buildvars.close()
866    
867  remember_list = []  ################### Targets to build and install libraries ###################
868    
869  if env['usedebug']:  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
870    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  env.Alias('target_init', [target_init])
871  else:  # delete buildvars upon cleanup
872    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Delete('$TARGET'))  env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
873    
874  if env['usempi']:  # The headers have to be installed prior to build in order to satisfy
875    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  # #include <paso/Common.h>
876  else:  env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
877    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Delete('$TARGET'))  env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
878    
879  if env['omp_optim'] != '':  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
880    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
 else:  
   remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Delete('$TARGET'))  
881    
882  env.Alias('remember_options', remember_list)  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
883    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
884    
885  ############ Targets to build and install libraries ############  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
886    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
887    
888  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
889  env.Alias('target_init', [target_init])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
890    
891  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
892  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
893    
894  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
895  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
896    
897  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
898  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
899    
900  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
901  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
902    
903  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
904  build_all_list = []  build_all_list = []
905  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
906  build_all_list += ['build_paso']  build_all_list += ['build_paso']
907  build_all_list += ['build_escript']  build_all_list += ['build_escript']
908    build_all_list += ['build_pasowrap']
909    build_all_list += ['build_dudley']
910  build_all_list += ['build_finley']  build_all_list += ['build_finley']
911  if env['usempi']: build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
912    build_all_list += ['build_weipa']
913    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
914    if env['usempi']:   build_all_list += ['build_pythonMPI']
915    build_all_list += ['build_escriptconvert']
916  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
917    
918  install_all_list = []  install_all_list = []
# Line 580  install_all_list += ['target_init'] Line 920  install_all_list += ['target_init']
920  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
921  install_all_list += ['install_paso']  install_all_list += ['install_paso']
922  install_all_list += ['install_escript']  install_all_list += ['install_escript']
923    install_all_list += ['install_pasowrap']
924    install_all_list += ['install_dudley']
925  install_all_list += ['install_finley']  install_all_list += ['install_finley']
926  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
927  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
928  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
929  if env['usempi']: install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_downunder_py']
930  install_all_list += ['remember_options']  install_all_list += ['install_modellib_py']
931    install_all_list += ['install_pycad_py']
932    if env['usempi']:   install_all_list += ['install_pythonMPI']
933    install_all_list += ['install_escriptconvert']
934  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
935    
936  # Default target is install  # Default target is install
937  env.Default('install_all')  env.Default('install_all')
938    
939  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
940    
941  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  if not env['cppunit']:
942        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
943        env.Alias('run_tests', test_msg)
944    env.Alias('run_tests', ['install_all'])
945    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
946    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
947    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
948    
949    ##################### Targets to build the documentation #####################
950    
951    env.Alias('api_epydoc','install_all')
952    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
953    env.Alias('release_prep', ['docs', 'install_all'])
954    
955    if not IS_WINDOWS:
956        try:
957            utest=open('utest.sh','w')
958            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix))
959            for tests in TestGroups:
960                utest.write(tests.makeString())
961            utest.close()
962            Execute(Chmod('utest.sh', 0o755))
963            print("Generated utest.sh.")
964        except IOError:
965            print("Error attempting to write unittests file.")
966            Exit(1)
967    
968        # delete utest.sh upon cleanup
969        env.Clean('target_init', 'utest.sh')
970    
971        # Make sure that the escript wrapper is in place
972        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
973            print("Copying escript wrapper.")
974            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
975    

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