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revision 2251 by gross, Fri Feb 6 06:50:39 2009 UTC revision 2391 by jfenwick, Thu Apr 16 01:08:57 2009 UTC
# Line 15  Line 15 
15  EnsureSConsVersion(0,96,91)  EnsureSConsVersion(0,96,91)
16  EnsurePythonVersion(2,3)  EnsurePythonVersion(2,3)
17    
18  import sys, os, re, socket  import sys, os, re, socket, platform, stat
19    
20  # Add our extensions  # Add our extensions
21  if os.path.isdir('scons'): sys.path.append('scons')  if os.path.isdir('scons'): sys.path.append('scons')
# Line 33  IS_WINDOWS_PLATFORM = (os.name== "nt") Line 33  IS_WINDOWS_PLATFORM = (os.name== "nt")
33    
34  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)
35    
36  # Read configuration options from file scons/<hostname>_options.py  #Determine where to read options from use:
37  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  #1. command line
38  tmp = os.path.join("scons",hostname+"_options.py")  #2. scons/<hostname>_options.py
39  options_file = ARGUMENTS.get('options_file', tmp)  #3. name as part of a cluster
40    options_file=ARGUMENTS.get('options_file', None)
41    if not options_file:
42      hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])
43      options_file = os.path.join("scons",hostname+"_options.py")
44      #If there is no options file with that name see if there is a substitute
45      if not os.path.isfile(options_file):
46        tmp = scons_extensions.effectiveName(hostname)
47        options_file = os.path.join("scons",tmp+"_options.py")
48    
49  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
50      print "Options file not found (expected '%s')" % options_file
51    options_file = False    options_file = False
   print "Options file not found (expected '%s')" % tmp  
52  else:  else:
53    print "Options file is", options_file    print "Options file is", options_file
54    
# Line 72  opts.AddOptions( Line 81  opts.AddOptions(
81    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
82    ('sys_libs', 'System libraries to link with', []),    ('sys_libs', 'System libraries to link with', []),
83    ('ar_flags', 'Static library archiver flags to use', ''),    ('ar_flags', 'Static library archiver flags to use', ''),
84    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'no'),
85    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),
86    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),
87      ('forcelazy','for testing use only - set the default value for autolazy','leave_alone'),
88  # Python  # Python
89    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),
90    ('python_lib_path', 'Path to Python libs', usr_lib),    ('python_lib_path', 'Path to Python libs', usr_lib),
# Line 97  opts.AddOptions( Line 107  opts.AddOptions(
107    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),
108    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),
109    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),
110      ('mpi_flavour','Type of MPI execution environment','none'),
111  # ParMETIS  # ParMETIS
112    BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),    BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),
113    ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),    ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),
# Line 188  elif env["CC"] == "gcc": Line 199  elif env["CC"] == "gcc":
199  #the long long warning occurs on the Mac  #the long long warning occurs on the Mac
200    cc_optim      = "-O3"    cc_optim      = "-O3"
201    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"    cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
202    omp_optim     = ""    omp_optim     = "-fopenmp"
203    omp_debug     = ""    omp_debug     = "-fopenmp"
204    omp_libs      = []    omp_libs      = ['gomp']
205    pedantic      = "-pedantic-errors -Wno-long-long"    pedantic      = "-pedantic-errors -Wno-long-long"
206    fatalwarning      = "-Werror"    fatalwarning      = "-Werror"
207    sysheaderopt      = "-isystem "    sysheaderopt      = "-isystem "
# Line 220  if env["omp_optim"]    == "-DEFAULT_4": env Line 231  if env["omp_optim"]    == "-DEFAULT_4": env
231  if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug
232  if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs
233    
234    #set up the autolazy values
235    if env['forcelazy']    != "leave_alone":
236      if env['forcelazy'] == 'on':
237        env.Append(CPPDEFINES='FAUTOLAZYON')
238      else:
239         if env['forcelazy'] == 'off':
240        env.Append(CPPDEFINES='FAUTOLAZYOFF')
241    
242  # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty
243  if not env["useopenmp"]:  if not env["useopenmp"]:
244    env['omp_optim'] = ""    env['omp_optim'] = ""
# Line 233  if env['omp_optim'] == "" and env['omp_d Line 252  if env['omp_optim'] == "" and env['omp_d
252  try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']
253  except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1
254    
255    try: env['ENV']['ESCRIPT_NUM_THREADS'] = os.environ['ESCRIPT_NUM_THREADS']
256    except KeyError: pass
257    
258    try: env['ENV']['ESCRIPT_NUM_PROCS'] = os.environ['ESCRIPT_NUM_PROCS']
259    except KeyError: pass
260    
261    try: env['ENV']['ESCRIPT_NUM_NODES'] = os.environ['ESCRIPT_NUM_NODES']
262    except KeyError: pass
263    
264    try: env['ENV']['ESCRIPT_HOSTFILE'] = os.environ['ESCRIPT_HOSTFILE']
265    except KeyError: pass
266    
267  try: env['ENV']['PATH'] = os.environ['PATH']  try: env['ENV']['PATH'] = os.environ['PATH']
268  except KeyError: pass  except KeyError: pass
269    
# Line 287  if env['usepedantic']: env.Append(CCFLAG Line 318  if env['usepedantic']: env.Append(CCFLAG
318    
319  # MS Windows  # MS Windows
320  if IS_WINDOWS_PLATFORM:  if IS_WINDOWS_PLATFORM:
321    env.PrependENVPath('PATH',    [env['boost_lib_path']])    env.AppendENVPath('PATH', [env['boost_lib_path']])
322    env.PrependENVPath('PATH',    [env['libinstall']])    env.AppendENVPath('PATH', [env['libinstall']])
323    if not env['share_esysUtils'] :    if not env['share_esysUtils'] :
324      env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])      env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
325    if not env['share_paso'] :    if not env['share_paso'] :
326      env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])      env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
327    
328    if env['usenetcdf']:    if env['usenetcdf']:
329      env.PrependENVPath('PATH',  [env['netCDF_lib_path']])      env.AppendENVPath('PATH',   [env['netCDF_lib_path']])
330    
331  env.Append(ARFLAGS = env['ar_flags'])  env.Append(ARFLAGS = env['ar_flags'])
332    
# Line 324  conf = Configure(clone_env(env)) Line 355  conf = Configure(clone_env(env))
355    
356  # Test that the compiler is working  # Test that the compiler is working
357  if not conf.CheckFunc('printf'):  if not conf.CheckFunc('printf'):
358    print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])     print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])
359    sys.exit(1)     sys.exit(1)
360    
361  if conf.CheckFunc('gethostname'):  if conf.CheckFunc('gethostname'):
362    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
# Line 342  conf.env.AppendUnique(LIBPATH      = [env['p Line 373  conf.env.AppendUnique(LIBPATH      = [env['p
373  conf.env.AppendUnique(LIBS      = [env['python_libs']])  conf.env.AppendUnique(LIBS      = [env['python_libs']])
374    
375  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs
376    conf.env.PrependENVPath('PYTHONPATH', prefix)
377    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
378    
379  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
380    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])
381    sys.exit(1)    sys.exit(1)
382  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
383    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])
384    sys.exit(1)    sys.exit(1)
385    
386  ############ boost (required) ##################################  ############ boost (required) ##################################
387    
388  if not sysheaderopt =="":  if not sysheaderopt =="":
389    conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path']+'boost')  # This is required because we can't -isystem /usr/system because it breaks std includes
390      if os.path.normpath(env['boost_path']) =="/usr/include":
391        conf.env.Append(CCFLAGS=sysheaderopt+os.path.join(env['boost_path'],'boost'))
392      else:
393        conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path'])
394  else:  else:
395    conf.env.AppendUnique(CPPPATH     = [env['boost_path']])    conf.env.AppendUnique(CPPPATH     = [env['boost_path']])
396    
# Line 361  conf.env.AppendUnique(LIBPATH      = [env['b Line 398  conf.env.AppendUnique(LIBPATH      = [env['b
398  conf.env.AppendUnique(LIBS      = [env['boost_libs']])  conf.env.AppendUnique(LIBS      = [env['boost_libs']])
399    
400  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs
401    #ensure that our path entries remain at the front
402    conf.env.PrependENVPath('PYTHONPATH', prefix)
403    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
404    
405  if not conf.CheckCXXHeader('boost/python.hpp'):  if not conf.CheckCXXHeader('boost/python.hpp'):
406    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])
407    sys.exit(1)    sys.exit(1)
408    
409  if not conf.CheckFunc('PyObject_SetAttr'):  if not conf.CheckFunc('PyObject_SetAttr'):
410    print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])    print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])
411    sys.exit(1)    sys.exit(1)
# Line 394  if env['usenetcdf']: Line 435  if env['usenetcdf']:
435    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])
436    conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])    conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])
437    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs
438      #ensure that our path entries remain at the front
439      conf.env.PrependENVPath('PYTHONPATH', prefix)
440      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
441    
442  if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0
443  if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0
# Line 415  if env['usepapi']: Line 459  if env['usepapi']:
459    conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])    conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])
460    conf.env.AppendUnique(LIBS    = [env['papi_libs']])    conf.env.AppendUnique(LIBS    = [env['papi_libs']])
461    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs
462      #ensure that our path entries remain at the front
463      conf.env.PrependENVPath('PYTHONPATH', prefix)
464      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
465    
466  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0
467  if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0
# Line 436  if env['usemkl']: Line 483  if env['usemkl']:
483    conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])    conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])
484    conf.env.AppendUnique(LIBS    = [env['mkl_libs']])    conf.env.AppendUnique(LIBS    = [env['mkl_libs']])
485    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs
486      #ensure that our path entries remain at the front
487      conf.env.PrependENVPath('PYTHONPATH', prefix)
488      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
489    
490  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0
491  if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  if env['usemkl'] and not conf.CheckFunc('pardiso'): env['usemkl'] = 0
492    
493  # Add MKL to environment env if it was found  # Add MKL to environment env if it was found
494  if env['usemkl']:  if env['usemkl']:
# Line 466  if env['useumfpack']: Line 516  if env['useumfpack']:
516    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs
517    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs
518    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs
519      #ensure that our path entries remain at the front
520      conf.env.PrependENVPath('PYTHONPATH', prefix)
521      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
522    
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
523  if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0
524    if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0
525  # if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?  # if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?
526    
527  # Add UMFPACK to environment env if it was found  # Add UMFPACK to environment env if it was found
# Line 511  else: Line 564  else:
564  env.Append(CCFLAGS      = env['cc_flags'])  env.Append(CCFLAGS      = env['cc_flags'])
565  env.Append(LIBS         = [env['omp_libs']])  env.Append(LIBS         = [env['omp_libs']])
566    
   
567  ############ Add some custom builders ##########################  ############ Add some custom builders ##########################
568    
569  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
# Line 523  env.Append(BUILDERS = {'RunUnitTest' : r Line 575  env.Append(BUILDERS = {'RunUnitTest' : r
575  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
576  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
577    
578    epstopdfbuilder = Builder(action = scons_extensions.eps2pdf, suffix=".pdf", src_suffix=".eps", single_source=True)
579    env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
580    
581  ############ MPI (optional) ####################################  ############ MPI (optional) ####################################
582    if not env['usempi']: env['mpi_flavour']='none'
583    
584  # Create a modified environment for MPI programs (identical to env if usempi=no)  # Create a modified environment for MPI programs (identical to env if usempi=no)
585  env_mpi = clone_env(env)  env_mpi = clone_env(env)
# Line 532  env_mpi = clone_env(env) Line 588  env_mpi = clone_env(env)
588  conf = Configure(clone_env(env_mpi))  conf = Configure(clone_env(env_mpi))
589    
590  if env_mpi['usempi']:  if env_mpi['usempi']:
591      VALID_MPIs=[ "MPT", "MPICH", "MPICH2", "OPENMPI", "INTELMPI" ]
592      if not env_mpi['mpi_flavour'] in VALID_MPIs:
593          raise ValueError,"MPI is enabled but mpi_flavour = %s is not a valid key from %s."%( env_mpi['mpi_flavour'],VALID_MPIs)
594    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])
595    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])
596    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])
597    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs
598      #ensure that our path entries remain at the front
599      conf.env.PrependENVPath('PYTHONPATH', prefix)
600      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
601    
602  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0
603  if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  # if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0
604    
605  # Add MPI to environment env_mpi if it was found  # Add MPI to environment env_mpi if it was found
606  if env_mpi['usempi']:  if env_mpi['usempi']:
# Line 549  else: Line 611  else:
611    
612  env['usempi'] = env_mpi['usempi']  env['usempi'] = env_mpi['usempi']
613    
614    
615  ############ ParMETIS (optional) ###############################  ############ ParMETIS (optional) ###############################
616    
617  # Start a new configure environment that reflects what we've already found  # Start a new configure environment that reflects what we've already found
# Line 561  if env_mpi['useparmetis']: Line 624  if env_mpi['useparmetis']:
624    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])
625    conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])    conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])
626    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs
627      #ensure that our path entries remain at the front
628      conf.env.PrependENVPath('PYTHONPATH', prefix)
629      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
630    
631  if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0
632  if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0
# Line 601  if env['usesilo']: print " Using Silo" Line 667  if env['usesilo']: print " Using Silo"
667  else: print "   Not using Silo"  else: print "   Not using Silo"
668  if env['useopenmp']: print "    Using OpenMP"  if env['useopenmp']: print "    Using OpenMP"
669  else: print "   Not using OpenMP"  else: print "   Not using OpenMP"
670  if env['usempi']: print "   Using MPI"  if env['usempi']: print "   Using MPI (flavour = %s)"%env['mpi_flavour']
671  else: print "   Not using MPI"  else: print "   Not using MPI"
672  if env['useparmetis']: print "  Using ParMETIS"  if env['useparmetis']: print "  Using ParMETIS"
673  else: print "   Not using ParMETIS (requires MPI)"  else: print "   Not using ParMETIS (requires MPI)"
# Line 616  print "" Line 682  print ""
682    
683  ############ Delete option-dependent files #####################  ############ Delete option-dependent files #####################
684    
685  Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.debug")))
686  Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.mpi")))
687  Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  Execute(Delete(os.path.join(env['libinstall'],"Compiled.with.openmp")))
688  if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  Execute(Delete(os.path.join(env['libinstall'],"pyversion")))
689    Execute(Delete(os.path.join(env['libinstall'],"buildvars")))
690    if not env['usempi']: Execute(Delete(os.path.join(env['libinstall'],"pythonMPI")))
691    
692    
693  ############ Build the subdirectories ##########################  ############ Build the subdirectories ##########################
# Line 657  env.SConscript(dirs = ['paso/profiling'] Line 725  env.SConscript(dirs = ['paso/profiling']
725  remember_list = []  remember_list = []
726    
727  if env['usedebug']:  if env['usedebug']:
728    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))    remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.debug"), None, Touch('$TARGET'))
729    
730  if env['usempi']:  if env['usempi']:
731    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))    remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.mpi"), None, Touch('$TARGET'))
732    
733  if env['omp_optim'] != '':  if env['useopenmp']:
734    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))    remember_list += env.Command(os.path.join(env['libinstall'],"Compiled.with.openmp"), None, Touch('$TARGET'))
735    
736  env.Alias('remember_options', remember_list)  env.Alias('remember_options', remember_list)
737    
738    
739    ############### Record python interpreter version ##############
740    
741    if not IS_WINDOWS_PLATFORM:
742      versionstring="Python "+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])
743      os.system("echo "+versionstring+" > "+os.path.join(env['libinstall'],"pyversion"))
744    
745    ############## Populate the buildvars file #####################
746    
747    buildvars=open(os.path.join(env['libinstall'],'buildvars'),'w')
748    buildvars.write('python='+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+'\n')
749    
750    # Find the boost version by extracting it from version.hpp
751    boosthpp=open(os.path.join(env['boost_path'],'boost','version.hpp'))
752    boostversion='unknown'
753    try:
754        for line in boosthpp:
755            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
756            if ver:
757                boostversion=ver.group(1)
758    except StopIteration:
759        pass
760    buildvars.write("boost="+boostversion+"\n")
761    buildvars.write("svn_revision="+str(global_revision)+"\n")
762    out="usedebug="
763    if env['usedebug']:
764        out+="y"
765    else:
766        out+="n"
767    out+="\nusempi="
768    if env['usempi']:
769        out+="y"
770    else:
771        out+="n"
772    out+="\nuseopenmp="
773    if env['useopenmp']:
774        out+="y"
775    else:
776        out+="n"
777    buildvars.write(out+"\n")
778    buildvars.write("mpi_flavour="+env['mpi_flavour']+'\n')
779    
780    buildvars.close()
781    
782    
783  ############ Targets to build and install libraries ############  ############ Targets to build and install libraries ############
784    
785  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))
# Line 692  build_all_list += ['build_paso'] Line 805  build_all_list += ['build_paso']
805  build_all_list += ['build_escript']  build_all_list += ['build_escript']
806  build_all_list += ['build_finley']  build_all_list += ['build_finley']
807  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']
808  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_escript_wrapper']
809  if env['usesilo']:  build_all_list += ['target_escript2silo']  if env['usesilo']:  build_all_list += ['target_escript2silo']
810  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
811    
# Line 706  install_all_list += ['target_install_pyv Line 819  install_all_list += ['target_install_pyv
819  install_all_list += ['target_install_modellib_py']  install_all_list += ['target_install_modellib_py']
820  install_all_list += ['target_install_pycad_py']  install_all_list += ['target_install_pycad_py']
821  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']
822  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_escript_wrapper']
823  if env['usesilo']:  install_all_list += ['target_install_escript2silo']  if env['usesilo']:  install_all_list += ['target_install_escript2silo']
824  install_all_list += ['remember_options']  install_all_list += ['remember_options']
825  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
# Line 720  env.Alias('build_cppunittest', ['target_ Line 833  env.Alias('build_cppunittest', ['target_
833  env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])
834  env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])
835  env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])
836    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
837    
838  ############ Targets to build the documentation ################  ############ Targets to build the documentation ################
839    
840  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html','install_pdf'])
841    
842  if not IS_WINDOWS_PLATFORM:  if not IS_WINDOWS_PLATFORM:
843     try:     try:
844      utest=open("utest.sh","w")      utest=open("utest.sh","w")
845      utest.write(makeHeader())      build_platform=os.name      #Sometimes Mac python says it is posix
846        if (build_platform=='posix') and platform.system()=="Darwin":
847            build_platform='darwin'
848        utest.write(GroupTest.makeHeader(build_platform))
849      for tests in TestGroups:      for tests in TestGroups:
850          utest.write(tests.makeString())          utest.write(tests.makeString())
851      utest.close()      utest.close()
852        os.chmod("utest.sh",stat.S_IRWXU|stat.S_IRGRP|stat.S_IXGRP|stat.S_IROTH|stat.S_IXOTH)
853      print "utest.sh written"      print "utest.sh written"
854     except IOError:     except IOError:
855      print "Error attempting to write unittests file."      print "Error attempting to write unittests file."

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