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revision 1789 by phornby, Mon Sep 15 08:34:44 2008 UTC revision 3851 by jfenwick, Wed Feb 29 05:23:30 2012 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ########################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2010 by University of Queensland
4  #       Primary Business: Queensland, Australia  # Earth Systems Science Computational Center (ESSCC)
5  #  Licensed under the Open Software License version 3.0  # http://www.uq.edu.au/esscc
6  #     http://www.opensource.org/licenses/osl-3.0.php  #
7    # Primary Business: Queensland, Australia
8  EnsureSConsVersion(0,96,91)  # Licensed under the Open Software License version 3.0
9  EnsurePythonVersion(2,3)  # http://www.opensource.org/licenses/osl-3.0.php
10    #
11  import sys, os, re, socket  ########################################################
   
 # Add our extensions  
 if os.path.isdir('scons'): sys.path.append('scons')  
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
12    
13  # The string python2.4 or python2.5  EnsureSConsVersion(0,98,1)
14  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  EnsurePythonVersion(2,5)
15    
16  # MS Windows support, many thanks to PH  import sys, os, platform, re
17  IS_WINDOWS_PLATFORM = (os.name== "nt")  from distutils import sysconfig
18    from site_init import *
19    import subprocess
20    from subprocess import PIPE, Popen
21    
22    # Version number to check for in options file. Increment when new features are
23    # added or existing options changed.
24    REQUIRED_OPTS_VERSION=201
25    
26  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  # MS Windows support, many thanks to PH
27    IS_WINDOWS = (os.name == 'nt')
28    
29  # Read configuration options from file scons/<hostname>_options.py  ########################## Determine options file ############################
30  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  # 1. command line
31  tmp = os.path.join("scons",hostname+"_options.py")  # 2. scons/<hostname>_options.py
32  options_file = ARGUMENTS.get('options_file', tmp)  # 3. name as part of a cluster
33  if not os.path.isfile(options_file): options_file = False  options_file=ARGUMENTS.get('options_file', None)
34  else: print "Options file is", options_file  if not options_file:
35        ext_dir = os.path.join(os.getcwd(), 'scons')
36  # Load options file and command-line arguments      hostname = platform.node().split('.')[0]
37  opts = Options(options_file, ARGUMENTS)      for name in hostname, effectiveName(hostname):
38            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
39  ############ Load build options ################################          options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
40            if os.path.isfile(options_file): break
41  opts.AddOptions(  
42  # Where to install esys stuff  if not os.path.isfile(options_file):
43    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),      print("\nWARNING:\nOptions file %s" % options_file)
44    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),      print("not found! Default options will be used which is most likely suboptimal.")
45    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
46    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),      print("subdirectory and customize it to your needs.\n")
47    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),      options_file = None
48  # Compilation options  
49    BoolOption('dodebug', 'For backwards compatibility', 'no'),  ############################### Build options ################################
50    BoolOption('usedebug', 'Do you want a debug build?', 'no'),  
51    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),  default_prefix='/usr'
52    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
53    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below  lapack_flavours=('none', 'clapack', 'mkl')
54    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),  
55    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),  vars = Variables(options_file, ARGUMENTS)
56    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  vars.AddVariables(
57    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
58    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
59    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
60    ('cc_extra', 'Extra C/C++ flags', ''),    BoolVariable('verbose', 'Output full compile/link lines', False),
61    # Compiler/Linker options
62      ('cc', 'Path to C compiler', 'default'),
63      ('cxx', 'Path to C++ compiler', 'default'),
64      ('cc_flags', 'Base C/C++ compiler flags', 'default'),
65      ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
66      ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
67      ('cc_extra', 'Extra C compiler flags', ''),
68      ('cxx_extra', 'Extra C++ compiler flags', ''),
69    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
70    ('sys_libs', 'System libraries to link with', []),    BoolVariable('werror','Treat compiler warnings as errors', True),
71    ('ar_flags', 'Static library archiver flags to use', ''),    BoolVariable('debug', 'Compile with debug flags', False),
72    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
73    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'yes'),    ('omp_flags', 'OpenMP compiler flags', 'default'),
74  # Python    ('omp_ldflags', 'OpenMP linker flags', 'default'),
75    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),  # Mandatory libraries
76    ('python_lib_path', 'Path to Python libs', usr_lib),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
77    ('python_libs', 'Python libraries to link with', [python_version]),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
78    ('python_cmd', 'Python command', 'python'),  # Mandatory for tests
79  # Boost    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
80    ('boost_path', 'Path to Boost includes', '/usr/include'),    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
81    ('boost_lib_path', 'Path to Boost libs', usr_lib),  # Optional libraries and options
82    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
83  # NetCDF    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
84    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
85    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    BoolVariable('netcdf', 'Enable netCDF file support', False),
86    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
87    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
88  # MPI    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
89    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
90    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
91    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    BoolVariable('papi', 'Enable PAPI', False),
92    ('mpi_path', 'Path to MPI includes', '/usr/include'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),  
   ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),  
 # ParMETIS  
   BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),  
   ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),  
   ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),  
   ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),  
 # PAPI  
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
93    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
94    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
95  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
96    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
97    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
98    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
99    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
100  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
101    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
102    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
103    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
104    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
105    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
106  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
107    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
108    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
109    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
110  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
111    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
112    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
113    ('blas_libs', 'BLAS libraries to link with', ['blas'])    BoolVariable('pyvisi', 'Enable pyvisi (deprecated, requires VTK module)', False),
114      BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
115    # Advanced settings
116      #dudley_assemble_flags = -funroll-loops      to actually do something
117      ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
118      # To enable passing function pointers through python
119      BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
120      # An option for specifying the compiler tools (see windows branch)
121      ('tools_names', 'Compiler tools to use', ['default']),
122      ('env_export', 'Environment variables to be passed to tools',[]),
123      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
125      # finer control over library building, intel aggressive global optimisation
126      # works with dynamic libraries on windows.
127      ('build_shared', 'Build dynamic libraries only', False),
128      ('sys_libs', 'Extra libraries to link with', []),
129      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
130      ('SVN_VERSION', 'Do not use from options file', -2),
131      ('pythoncmd', 'which python to compile with','python'),
132  )  )
133    
134  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
135    
136  # intelc uses regular expressions improperly and emits a warning about  # Intel's compiler uses regular expressions improperly and emits a warning
137  # failing to find the compilers.  This warning can be safely ignored.  # about failing to find the compilers. This warning can be safely ignored.
138    
139  if IS_WINDOWS_PLATFORM:  # PATH is needed so the compiler, linker and tools are found if they are not
140        env = Environment(tools = ['default', 'msvc'], options = opts)  # in default locations.
141    env = Environment(tools = ['default'], options = vars,
142                      ENV = {'PATH': os.environ['PATH']})
143    if env['tools_names'] != 'default':
144        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
145                          ENV = {'PATH' : os.environ['PATH']})
146    
147    if options_file:
148        opts_valid=False
149        if 'escript_opts_version' in env.Dictionary() and \
150            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
151                opts_valid=True
152        if opts_valid:
153            print("Using options in %s." % options_file)
154        else:
155            print("\nOptions file %s" % options_file)
156            print("is outdated! Please update the file by examining one of the TEMPLATE")
157            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
158            Exit(1)
159    
160    # Generate help text (scons -h)
161    Help(vars.GenerateHelpText(env))
162    
163    # Check for superfluous options
164    if len(vars.UnknownVariables())>0:
165        for k in vars.UnknownVariables():
166            print("Unknown option '%s'" % k)
167        Exit(1)
168    
169    #################### Make sure install directories exist #####################
170    
171    env['BUILD_DIR']=env['build_dir']
172    prefix=Dir(env['prefix']).abspath
173    env['incinstall'] = os.path.join(prefix, 'include')
174    env['bininstall'] = os.path.join(prefix, 'bin')
175    env['libinstall'] = os.path.join(prefix, 'lib')
176    env['pyinstall']  = os.path.join(prefix, 'esys')
177    if not os.path.isdir(env['bininstall']):
178        os.makedirs(env['bininstall'])
179    if not os.path.isdir(env['libinstall']):
180        os.makedirs(env['libinstall'])
181    if not os.path.isdir(env['pyinstall']):
182        os.makedirs(env['pyinstall'])
183    
184    env.Append(CPPPATH = [env['incinstall']])
185    env.Append(LIBPATH = [env['libinstall']])
186    
187    ################# Fill in compiler options if not set above ##################
188    
189    if env['cc'] != 'default': env['CC']=env['cc']
190    if env['cxx'] != 'default': env['CXX']=env['cxx']
191    
192    # version >=9 of intel C++ compiler requires use of icpc to link in C++
193    # runtimes (icc does not)
194    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
195        env['LINK'] = env['CXX']
196    
197    # default compiler/linker options
198    cc_flags = ''
199    cc_optim = ''
200    cc_debug = ''
201    omp_flags = ''
202    omp_ldflags = ''
203    fatalwarning = '' # switch to turn warnings into errors
204    sysheaderopt = '' # how to indicate that a header is a system header
205    
206    # env['CC'] might be a full path
207    cc_name=os.path.basename(env['CC'])
208    
209    if cc_name == 'icc':
210        # Intel compiler
211        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
212        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
213        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
214        omp_flags   = "-openmp -openmp_report0"
215        omp_ldflags = "-openmp -openmp_report0 -lpthread"
216        fatalwarning = "-Werror"
217    elif cc_name[:3] == 'gcc':
218        # GNU C on any system
219        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
220        cc_optim     = "-O3"
221        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
222        omp_flags    = "-fopenmp"
223        omp_ldflags  = "-fopenmp"
224        fatalwarning = "-Werror"
225        sysheaderopt = "-isystem"
226    elif cc_name == 'cl':
227        # Microsoft Visual C on Windows
228        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
229        cc_optim     = "/O2 /Op /W3"
230        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
231        fatalwarning = "/WX"
232    elif cc_name == 'icl':
233        # Intel C on Windows
234        cc_flags     = '/EHsc /GR /MD'
235        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
236        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
237        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
238        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
239    
240    # set defaults if not otherwise specified
241    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
242    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
243    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
244    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
245    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
246    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
247    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
248    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
249    
250    # set up the autolazy values
251    if env['forcelazy'] == 'on':
252        env.Append(CPPDEFINES=['FAUTOLAZYON'])
253    elif env['forcelazy'] == 'off':
254        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
255    
256    # set up the collective resolve values
257    if env['forcecollres'] == 'on':
258        env.Append(CPPDEFINES=['FRESCOLLECTON'])
259    elif env['forcecollres'] == 'off':
260        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
261    
262    # allow non-standard C if requested
263    if env['iknowwhatimdoing']:
264        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
265    
266    # Disable OpenMP if no flags provided
267    if env['openmp'] and env['omp_flags'] == '':
268       print("OpenMP requested but no flags provided - disabling OpenMP!")
269       env['openmp'] = False
270    
271    if env['openmp']:
272        env.Append(CCFLAGS = env['omp_flags'])
273        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
274  else:  else:
275     if socket.gethostname().split('.')[0] == 'service0':      env['omp_flags']=''
276        env = Environment(tools = ['default', 'intelc'], options = opts)      env['omp_ldflags']=''
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
277    
278  ############ Fill in compiler options if not set above #########  # add debug/non-debug compiler flags
279    if env['debug']:
280        env.Append(CCFLAGS = env['cc_debug'])
281    else:
282        env.Append(CCFLAGS = env['cc_optim'])
283    
284  # Backwards compatibility: allow dodebug=yes and useMPI=yes  # always add cc_flags
285  if env['dodebug']: env['usedebug'] = 1  env.Append(CCFLAGS = env['cc_flags'])
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER"  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -UDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = "-pedantic-errors -Wno-long-long"  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
286    
287  try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  # add system libraries
288  except KeyError: pass  env.AppendUnique(LIBS = env['sys_libs'])
289    
 try: env['ENV']['HOME'] = os.environ['HOME']  
 except KeyError: pass  
290    
291  # Configure for test suite  global_revision=ARGUMENTS.get('SVN_VERSION', None)
292  env.PrependENVPath('PYTHONPATH', prefix)  if global_revision:
293  env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])      global_revision = re.sub(':.*', '', global_revision)
294        global_revision = re.sub('[^0-9]', '', global_revision)
295        if global_revision == '': global_revision='-2'
296    else:
297      # Get the global Subversion revision number for the getVersion() method
298      try:
299        global_revision = os.popen('svnversion -n .').read()
300        global_revision = re.sub(':.*', '', global_revision)
301        global_revision = re.sub('[^0-9]', '', global_revision)
302        if global_revision == '': global_revision='-2'
303      except:
304        global_revision = '-1'
305    env['svn_revision']=global_revision
306    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
307    
308    if IS_WINDOWS:
309        if not env['build_shared']:
310            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
311            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
312    
313    ###################### Copy required environment vars ########################
314    
315    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
316    if IS_WINDOWS:
317        LD_LIBRARY_PATH_KEY='PATH'
318        env['ENV']['LD_LIBRARY_PATH']=''
319    else:
320        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
321    
322  env['ENV']['ESCRIPT_ROOT'] = prefix  # the following env variables are exported for the unit tests
323    
324  ############ Set up paths for Configure() ######################  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
325        try:
326            env['ENV'][key] = os.environ[key]
327        except KeyError:
328            env['ENV'][key] = 1
329    
330    env_export=env['env_export']
331    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
332    
333    for key in set(env_export):
334        try:
335            env['ENV'][key] = os.environ[key]
336        except KeyError:
337            pass
338    
339  # Make a copy of an environment  try:
340  # Use env.Clone if available, but fall back on env.Copy for older version of scons      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
341  def clone_env(env):  except KeyError:
342    if 'Clone' in dir(env): return env.Clone()    # scons-0.98      pass
343    else:                   return env.Copy() # scons-0.96  
344    # these shouldn't be needed
345    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
346    #    try:
347    #        env['ENV'][key] = os.environ[key]
348    #    except KeyError:
349    #        pass
350    
351  # Add cc option -I<Escript>/trunk/include  try:
352  env.Append(CPPPATH      = [Dir('include')])      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
353    except KeyError:
354        pass
355    
356  # Add cc option -L<Escript>/trunk/lib  ######################## Add some custom builders ############################
 env.Append(LIBPATH      = [Dir(env['libinstall'])])  
357    
358  env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])  if env['pythoncmd']=='python':
359        py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
360    else:
361        py_builder = Builder(action = "scripts/testcomp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
362    env.Append(BUILDERS = {'PyCompile' : py_builder});
363    
364  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
365  if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
366    
367  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
368    env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
369    
370  # MS Windows  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
371  if IS_WINDOWS_PLATFORM:  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
372    
373  env.Append(ARFLAGS = env['ar_flags'])  ############################ Dependency checks ###############################
374    
375  # Get the global Subversion revision number for getVersion() method  # Create a Configure() environment to check for compilers and python
376  try:  conf = Configure(env.Clone())
    global_revision = os.popen("svnversion -n .").read()  
    global_revision = re.sub(":.*", "", global_revision)  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
   
 ############ numarray (required) ###############################  
377    
378  try:  ######## Test that the compilers work
379    from numarray import identity  
380  except ImportError:  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
381    print "Cannot import numarray, you need to set your PYTHONPATH"      if not conf.CheckCC():
382    sys.exit(1)          print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
383            Exit(1)
384  ############ C compiler (required) #############################      if not conf.CheckCXX():
385            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
386  # Create a Configure() environment for checking existence of required libraries and headers          Exit(1)
387  conf = Configure(clone_env(env))  else:
388        if not conf.CheckFunc('printf', language='c'):
389  # Test that the compiler is working          print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
390  if not conf.CheckFunc('printf'):          Exit(1)
391    print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])      if not conf.CheckFunc('printf', language='c++'):
392    sys.exit(1)          print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
393            Exit(1)
394    
395  if conf.CheckFunc('gethostname'):  if conf.CheckFunc('gethostname'):
396    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
397    
398  ############ python libraries (required) #######################  ######## Python headers & library (required)
399    
400  conf.env.AppendUnique(CPPPATH       = [env['python_path']])  python_inc_path=sysconfig.get_python_inc()
401  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  if IS_WINDOWS:
402  conf.env.AppendUnique(LIBS      = [env['python_libs']])      python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
403    elif env['PLATFORM']=='darwin':
404        python_lib_path=sysconfig.get_config_var('LIBPL')
405    else:
406        python_lib_path=sysconfig.get_config_var('LIBDIR')
407    #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
408    if IS_WINDOWS:
409        python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
410    else:
411        python_libs=['python'+sysconfig.get_python_version()]
412    
413    #if we want to use a python other than the one scons is running
414    if env['pythoncmd']!='python':
415       py3scons=False   # Is scons running on python3?
416       initstring='from __future__ import print_function;from distutils import sysconfig;'
417       if IS_WINDOWS:
418          cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
419       else:
420          cmd='print("python"+sysconfig.get_python_version())'
421       p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
422       python_libs=p.stdout.readline()
423       if type(python_libs)!=str():
424          py3scons=True
425          python_libs=python_libs.encode()
426       p.wait()
427       python_libs=python_libs.strip()
428       # Now we know whether we are using python3 or not
429       p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
430       python_inc_path=p.stdout.readline()
431       if py3scons:
432             python_inc_path=python_inc_path.encode()
433       p.wait()  
434       python_inc_path=python_inc_path.strip()
435       if IS_WINDOWS:
436            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
437       elif env['PLATFORM']=='darwin':
438            cmd="sysconfig.get_config_var(\"LIBPL\")"
439       else:
440            cmd="sysconfig.get_config_var(\"LIBDIR\")"
441    
442  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs     p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
443       python_lib_path=p.stdout.readline()
444       if py3scons:
445          python_lib_path=python_lib_path.decode()
446       p.wait()
447       python_lib_path=python_lib_path.strip()
448    
449    
450    
451    
452    if sysheaderopt == '':
453        conf.env.AppendUnique(CPPPATH = [python_inc_path])
454    else:
455        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
456    
457    conf.env.AppendUnique(LIBPATH = [python_lib_path])
458    conf.env.AppendUnique(LIBS = python_libs)
459    # The wrapper script needs to find the libs
460    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
461    
462  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
463    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
464    sys.exit(1)      Exit(1)
465  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
466    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
467    sys.exit(1)      Exit(1)
468    
469  ############ boost (required) ##################################  # reuse conf to check for numpy header (optional)
470    if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
471  conf.env.AppendUnique(CPPPATH       = [env['boost_path']])      conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
472  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])      conf.env['numpy_h']=True
473  conf.env.AppendUnique(LIBS      = [env['boost_libs']])  else:
474        conf.env['numpy_h']=False
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  
   
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('PyObject_SetAttr'):  
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
475    
476  # Commit changes to environment  # Commit changes to environment
477  env = conf.Finish()  env = conf.Finish()
478    
479  ############ VTK (optional) ####################################  ######## boost (required)
480    
481  if env['usevtk']:  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
482    try:  if sysheaderopt == '':
483      import vtk      env.AppendUnique(CPPPATH = [boost_inc_path])
484      env['usevtk'] = 1  else:
485    except ImportError:      # This is required because we can't -isystem /usr/include since it breaks
486      env['usevtk'] = 0      # std includes
487        if os.path.normpath(boost_inc_path) == '/usr/include':
488  # Add VTK to environment env if it was found          conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
489  if env['usevtk']:      else:
490    env.Append(CPPDEFINES = ['USE_VTK'])          env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
491    
492  ############ NetCDF (optional) #################################  env.AppendUnique(LIBPATH = [boost_lib_path])
493    env.AppendUnique(LIBS = env['boost_libs'])
494  conf = Configure(clone_env(env))  env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
495    
496  if env['usenetcdf']:  ######## numpy (required)
497    conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
498    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  if env['pythoncmd']=='python':
499    conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])      try:
500    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs        from numpy import identity
501        except ImportError:
502  if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0        print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
503  if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0        Exit(1)
504    else:
505  # Add NetCDF to environment env if it was found      p=subprocess.call([env['pythoncmd'],'-c','import numpy'])
506  if env['usenetcdf']:      if p!=0:
507    env = conf.Finish()        print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
508    env.Append(CPPDEFINES = ['USE_NETCDF'])        Exit(1)
 else:  
   conf.Finish()  
   
 ############ PAPI (optional) ###################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usepapi']:  
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs  
   
 if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
   
 # Add PAPI to environment env if it was found  
 if env['usepapi']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['BLOCKPAPI'])  
 else:  
   conf.Finish()  
   
 ############ MKL (optional) ####################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['usemkl']:  
   conf.env.AppendUnique(CPPPATH = [env['mkl_path']])  
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs  
   
 if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
   
 # Add MKL to environment env if it was found  
 if env['usemkl']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['MKL'])  
 else:  
   conf.Finish()  
   
 ############ UMFPACK (optional) ################################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['useumfpack']:  
   conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs  
   
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
   
 # Add UMFPACK to environment env if it was found  
 if env['useumfpack']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
 else:  
   conf.Finish()  
   
 ############ Add the compiler flags ############################  
   
 # Enable debug by choosing either cc_debug or cc_optim  
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
 else:  
   env.Append(CCFLAGS        = env['cc_optim'])  
   env.Append(CCFLAGS        = env['omp_optim'])  
   
 # Always use cc_flags  
 env.Append(CCFLAGS      = env['cc_flags'])  
 env.Append(LIBS         = [env['omp_libs']])  
   
 ############ MPI (optional) ####################################  
   
 # Create a modified environment for MPI programs (identical to env if usempi=no)  
 env_mpi = clone_env(env)  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if env_mpi['usempi']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs  
   
 if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
   
 # Add MPI to environment env_mpi if it was found  
 if env_mpi['usempi']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])  
 else:  
   conf.Finish()  
   
 env['usempi'] = env_mpi['usempi']  
   
 ############ ParMETIS (optional) ###############################  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  
   
 if env_mpi['useparmetis']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs  
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
   
 # Add ParMETIS to environment env_mpi if it was found  
 if env_mpi['useparmetis']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])  
 else:  
   conf.Finish()  
   
 env['useparmetis'] = env_mpi['useparmetis']  
   
 ############ Summarize our environment #########################  
   
 print ""  
 print "Summary of configuration (see ./config.log for information)"  
 print " Using python libraries"  
 print " Using numarray"  
 print " Using boost"  
 if env['usenetcdf']: print "    Using NetCDF"  
 else: print "   Not using NetCDF"  
 if env['usevtk']: print "   Using VTK"  
 else: print "   Not using VTK"  
 if env['usemkl']: print "   Using MKL"  
 else: print "   Not using MKL"  
 if env['useumfpack']: print "   Using UMFPACK"  
 else: print "   Not using UMFPACK"  
 if env['useopenmp']: print "    Using OpenMP"  
 else: print "   Not using OpenMP"  
 if env['usempi']: print "   Using MPI"  
 else: print "   Not using MPI"  
 if env['useparmetis']: print "  Using ParMETIS"  
 else: print "   Not using ParMETIS (requires MPI)"  
 if env['usepapi']: print "  Using PAPI"  
 else: print "   Not using PAPI"  
 if env['usedebug']: print " Compiling for debug"  
 else: print "   Not compiling for debug"  
 print " Installing in", prefix  
 print ""  
   
 ############ Delete option-dependent files #####################  
   
 Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  
 if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  
509    
510  ############ Add some custom builders ##########################  ######## CppUnit (required for tests)
511    
512  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  try:
513  env.Append(BUILDERS = {'PyCompile' : py_builder});      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
514        env.AppendUnique(CPPPATH = [cppunit_inc_path])
515        env.AppendUnique(LIBPATH = [cppunit_lib_path])
516        env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
517        env['cppunit']=True
518    except:
519        env['cppunit']=False
520    
521  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  ######## VTK (optional)
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
522    
523  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  if env['pyvisi']:
524  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});      try:
525            import vtk
526            env['pyvisi'] = True
527        except ImportError:
528            print("Cannot import vtk, disabling pyvisi.")
529            env['pyvisi'] = False
530    
531    ######## netCDF (optional)
532    
533    netcdf_inc_path=''
534    netcdf_lib_path=''
535    if env['netcdf']:
536        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
537        env.AppendUnique(CPPPATH = [netcdf_inc_path])
538        env.AppendUnique(LIBPATH = [netcdf_lib_path])
539        env.AppendUnique(LIBS = env['netcdf_libs'])
540        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
541        env.Append(CPPDEFINES = ['USE_NETCDF'])
542    
543    ######## PAPI (optional)
544    
545    papi_inc_path=''
546    papi_lib_path=''
547    if env['papi']:
548        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
549        env.AppendUnique(CPPPATH = [papi_inc_path])
550        env.AppendUnique(LIBPATH = [papi_lib_path])
551        env.AppendUnique(LIBS = env['papi_libs'])
552        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
553        env.Append(CPPDEFINES = ['BLOCKPAPI'])
554    
555    ######## MKL (optional)
556    
557    mkl_inc_path=''
558    mkl_lib_path=''
559    if env['mkl']:
560        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
561        env.AppendUnique(CPPPATH = [mkl_inc_path])
562        env.AppendUnique(LIBPATH = [mkl_lib_path])
563        env.AppendUnique(LIBS = env['mkl_libs'])
564        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
565        env.Append(CPPDEFINES = ['MKL'])
566    
567    ######## UMFPACK (optional)
568    
569    umfpack_inc_path=''
570    umfpack_lib_path=''
571    if env['umfpack']:
572        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
573        env.AppendUnique(CPPPATH = [umfpack_inc_path])
574        env.AppendUnique(LIBPATH = [umfpack_lib_path])
575        env.AppendUnique(LIBS = env['umfpack_libs'])
576        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
577        env.Append(CPPDEFINES = ['UMFPACK'])
578    
579    ######## LAPACK (optional)
580    
581    if env['lapack']=='mkl' and not env['mkl']:
582        print("mkl_lapack requires MKL!")
583        Exit(1)
584    
585    env['uselapack'] = env['lapack']!='none'
586    lapack_inc_path=''
587    lapack_lib_path=''
588    if env['uselapack']:
589        header='clapack.h'
590        if env['lapack']=='mkl':
591            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
592            header='mkl_lapack.h'
593        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
594        env.AppendUnique(CPPPATH = [lapack_inc_path])
595        env.AppendUnique(LIBPATH = [lapack_lib_path])
596        env.AppendUnique(LIBS = env['lapack_libs'])
597        env.Append(CPPDEFINES = ['USE_LAPACK'])
598    
599    ######## Silo (optional)
600    
601    silo_inc_path=''
602    silo_lib_path=''
603    if env['silo']:
604        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
605        env.AppendUnique(CPPPATH = [silo_inc_path])
606        env.AppendUnique(LIBPATH = [silo_lib_path])
607        # Note that we do not add the libs since they are only needed for the
608        # weipa library and tools.
609        #env.AppendUnique(LIBS = [env['silo_libs']])
610    
611    ######## VSL random numbers (optional)
612    if env['vsl_random']:
613        env.Append(CPPDEFINES = ['MKLRANDOM'])
614    
615    ######## VisIt (optional)
616    
617    visit_inc_path=''
618    visit_lib_path=''
619    if env['visit']:
620        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
621        env.AppendUnique(CPPPATH = [visit_inc_path])
622        env.AppendUnique(LIBPATH = [visit_lib_path])
623    
624    ######## MPI (optional)
625    
626    if env['mpi']=='no':
627        env['mpi']='none'
628    
629    env['usempi'] = env['mpi']!='none'
630    mpi_inc_path=''
631    mpi_lib_path=''
632    if env['usempi']:
633        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
634        env.AppendUnique(CPPPATH = [mpi_inc_path])
635        env.AppendUnique(LIBPATH = [mpi_lib_path])
636        env.AppendUnique(LIBS = env['mpi_libs'])
637        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
638        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
639        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
640        # On the other hand MPT and OpenMPI don't define the latter so we have to
641        # do that here
642        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
643            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
644    
645    ######## BOOMERAMG (optional)
646    
647    if env['mpi'] == 'none': env['boomeramg'] = False
648    
649    boomeramg_inc_path=''
650    boomeramg_lib_path=''
651    if env['boomeramg']:
652        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
653        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
654        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
655        env.AppendUnique(LIBS = env['boomeramg_libs'])
656        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
657        env.Append(CPPDEFINES = ['BOOMERAMG'])
658    
659    ######## ParMETIS (optional)
660    
661    if not env['usempi']: env['parmetis'] = False
662    
663    parmetis_inc_path=''
664    parmetis_lib_path=''
665    if env['parmetis']:
666        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
667        env.AppendUnique(CPPPATH = [parmetis_inc_path])
668        env.AppendUnique(LIBPATH = [parmetis_lib_path])
669        env.AppendUnique(LIBS = env['parmetis_libs'])
670        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
671        env.Append(CPPDEFINES = ['USE_PARMETIS'])
672    
673  ############ Build the subdirectories ##########################  ######## gmsh (optional, for tests)
674    
675  Export(["env", "env_mpi", "clone_env"])  try:
676        import subprocess
677        p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
678        _,e=p.communicate()
679        if e.split().count("MPI"):
680            env['gmsh']='m'
681        else:
682            env['gmsh']='s'
683    except OSError:
684        env['gmsh']=False
685    
686    ######## PDFLaTeX (for documentation)
687    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
688        env['pdflatex']=True
689    else:
690        env['pdflatex']=False
691    
692    ######################## Summarize our environment ###########################
693    
694    # keep some of our install paths first in the list for the unit tests
695    env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
696    env.PrependENVPath('PYTHONPATH', prefix)
697    env['ENV']['ESCRIPT_ROOT'] = prefix
698    
699    if not env['verbose']:
700        env['CCCOMSTR'] = "Compiling $TARGET"
701        env['CXXCOMSTR'] = "Compiling $TARGET"
702        env['SHCCCOMSTR'] = "Compiling $TARGET"
703        env['SHCXXCOMSTR'] = "Compiling $TARGET"
704        env['ARCOMSTR'] = "Linking $TARGET"
705        env['LINKCOMSTR'] = "Linking $TARGET"
706        env['SHLINKCOMSTR'] = "Linking $TARGET"
707        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
708        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
709        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
710        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
711        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
712    
713    print("")
714    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
715    print("Escript/Finley revision %s"%global_revision)
716    print("  Install prefix:  %s"%env['prefix'])
717    print("          Python:  %s"%sysconfig.PREFIX)
718    print("           boost:  %s"%env['boost_prefix'])
719    print("           numpy:  YES")
720    if env['usempi']:
721        print("             MPI:  YES (flavour: %s)"%env['mpi'])
722    else:
723        print("             MPI:  DISABLED")
724    if env['uselapack']:
725        print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
726    else:
727        print("          LAPACK:  DISABLED")
728    d_list=[]
729    e_list=[]
730    for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':
731        if env[i]: e_list.append(i)
732        else: d_list.append(i)
733    for i in e_list:
734        print("%16s:  YES"%i)
735    for i in d_list:
736        print("%16s:  DISABLED"%i)
737    if env['cppunit']:
738        print("         CppUnit:  FOUND")
739    else:
740        print("         CppUnit:  NOT FOUND")
741    if env['gmsh']=='m':
742        print("            gmsh:  FOUND, MPI-ENABLED")
743    elif env['gmsh']=='s':
744        print("            gmsh:  FOUND")
745    else:
746        print("            gmsh:  NOT FOUND")
747    if env['numpy_h']:
748        print("   numpy headers:  FOUND")
749    else:
750        print("   numpy headers:  NOT FOUND")
751    print("   vsl_random:  %s"%env['vsl_random'])
752        
753    if ((fatalwarning != '') and (env['werror'])):
754        print("  Treating warnings as errors")
755    else:
756        print("  NOT treating warnings as errors")
757    print("")
758    
759  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  ####################### Configure the subdirectories #########################
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  
760    
761  ############ Remember what optimizations we used ###############  from grouptest import *
762    
763  remember_list = []  TestGroups=[]
764    
765  if env['usedebug']:  # keep an environment without warnings-as-errors
766    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  dodgy_env=env.Clone()
767    
768  if env['usempi']:  # now add warnings-as-errors flags. This needs to be done after configuration
769    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  # because the scons test files have warnings in them
770    if ((fatalwarning != '') and (env['werror'])):
771        env.Append(CCFLAGS = fatalwarning)
772    
773  if env['omp_optim'] != '':  Export(
774    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))    ['env',
775       'dodgy_env',
776       'IS_WINDOWS',
777       'TestGroups'
778      ]
779    )
780    
781  env.Alias('remember_options', remember_list)  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
782    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
783    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
784    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
785    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
786    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
787    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
788    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
789    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
790    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
791    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
792    env.SConscript(dirs = ['pyvisi/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pyvisi', duplicate=0)
793    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
794    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
795    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
796    
797    ######################## Populate the buildvars file #########################
798    
799    # remove obsolete file
800    if not env['usempi']:
801        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
802        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
803    
804    # Try to extract the boost version from version.hpp
805    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
806    boostversion='unknown'
807    try:
808        for line in boosthpp:
809            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
810            if ver:
811                boostversion=ver.group(1)
812    except StopIteration:
813        pass
814    boosthpp.close()
815    
816    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
817    buildvars.write("svn_revision="+str(global_revision)+"\n")
818    buildvars.write("prefix="+prefix+"\n")
819    buildvars.write("cc="+env['CC']+"\n")
820    buildvars.write("cxx="+env['CXX']+"\n")
821    if env['pythoncmd']=='python':
822        buildvars.write("python="+sys.executable+"\n")
823        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
824    else:
825        buildvars.write("python="+env['pythoncmd']+"\n")
826        p=Popen([env['pythoncmd'], '-c', 'from __future__import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])'], stdout=PIPE)
827        verstring=p.stdout.readline().strip()
828        p.wait()
829        buildvars.write("python version="+verstring+"\n")
830    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
831    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
832    buildvars.write("boost_version="+boostversion+"\n")
833    buildvars.write("debug=%d\n"%int(env['debug']))
834    buildvars.write("openmp=%d\n"%int(env['openmp']))
835    buildvars.write("mpi=%s\n"%env['mpi'])
836    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
837    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
838    buildvars.write("lapack=%s\n"%env['lapack'])
839    buildvars.write("pyvisi=%d\n"%env['pyvisi'])
840    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
841    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
842        buildvars.write("%s=%d\n"%(i, int(env[i])))
843        if env[i]:
844            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
845            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
846    buildvars.close()
847    
848  ############ Targets to build and install libraries ############  ################### Targets to build and install libraries ###################
849    
850  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
851  env.Alias('target_init', [target_init])  env.Alias('target_init', [target_init])
852    # delete buildvars upon cleanup
853    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
854    
855  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  # The headers have to be installed prior to build in order to satisfy
856  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  # #include <paso/Common.h>
857  env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
858    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
859    
860  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
861  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
862    
863  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
864  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
865    
866  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
867  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
868    
869  # Now gather all the above into a couple easy targets: build_all and install_all  
870    env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
871    env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
872    
873    env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
874    env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
875    
876    env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
877    env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
878    
879    env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
880    env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
881    
882    env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
883    env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
884    
885    # Now gather all the above into some easy targets: build_all and install_all
886  build_all_list = []  build_all_list = []
887  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
888  build_all_list += ['build_paso']  build_all_list += ['build_paso']
889  build_all_list += ['build_escript']  build_all_list += ['build_escript']
890    build_all_list += ['build_pasowrap']
891    build_all_list += ['build_dudley']
892  build_all_list += ['build_finley']  build_all_list += ['build_finley']
893  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
894  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  build_all_list += ['build_weipa']
895    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
896    if env['usempi']:   build_all_list += ['build_pythonMPI']
897    build_all_list += ['build_escriptconvert']
898  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
899    
900  install_all_list = []  install_all_list = []
# Line 600  install_all_list += ['target_init'] Line 902  install_all_list += ['target_init']
902  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
903  install_all_list += ['install_paso']  install_all_list += ['install_paso']
904  install_all_list += ['install_escript']  install_all_list += ['install_escript']
905    install_all_list += ['install_pasowrap']
906    install_all_list += ['install_dudley']
907  install_all_list += ['install_finley']  install_all_list += ['install_finley']
908  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
909  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
910  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
911  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  #install_all_list += ['install_pyvisi_py']
912  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  install_all_list += ['install_modellib_py']
913  install_all_list += ['remember_options']  install_all_list += ['install_pycad_py']
914    if env['usempi']:   install_all_list += ['install_pythonMPI']
915    install_all_list += ['install_escriptconvert']
916  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
917    
918  # Default target is install  # Default target is install
919  env.Default('install_all')  env.Default('install_all')
920    
921  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
922    
923  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
924    if not env['cppunit']:
925        env.Alias('run_tests', test_msg)
926    env.Alias('run_tests', ['install_all'])
927    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
928    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
929    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
930    
931    ##################### Targets to build the documentation #####################
932    
933    env.Alias('api_epydoc','install_all')
934    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
935    env.Alias('release_prep', ['docs', 'install_all'])
936    
937    if not IS_WINDOWS:
938        try:
939            utest=open('utest.sh','w')
940            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix))
941            for tests in TestGroups:
942                utest.write(tests.makeString())
943            utest.close()
944            Execute(Chmod('utest.sh', 0o755))
945            print("Generated utest.sh.")
946        except IOError:
947            print("Error attempting to write unittests file.")
948            Exit(1)
949    
950        # delete utest.sh upon cleanup
951        env.Clean('target_init', 'utest.sh')
952    
953        # Make sure that the escript wrapper is in place
954        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
955            print("Copying escript wrapper.")
956            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
957    

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