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revision 3506 by jfenwick, Wed May 11 01:59:45 2011 UTC revision 3784 by caltinay, Wed Jan 25 01:31:42 2012 UTC
# Line 19  from site_init import * Line 19  from site_init import *
19    
20  # Version number to check for in options file. Increment when new features are  # Version number to check for in options file. Increment when new features are
21  # added or existing options changed.  # added or existing options changed.
22  REQUIRED_OPTS_VERSION=200  REQUIRED_OPTS_VERSION=201
23    
24  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
25  IS_WINDOWS = (os.name == 'nt')  IS_WINDOWS = (os.name == 'nt')
# Line 47  if not os.path.isfile(options_file): Line 47  if not os.path.isfile(options_file):
47  ############################### Build options ################################  ############################### Build options ################################
48    
49  default_prefix='/usr'  default_prefix='/usr'
50  mpi_flavours=('none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
51  lapack_flavours=('none', 'clapack', 'mkl')  lapack_flavours=('none', 'clapack', 'mkl')
52    
53  vars = Variables(options_file, ARGUMENTS)  vars = Variables(options_file, ARGUMENTS)
# Line 73  vars.AddVariables( Line 73  vars.AddVariables(
73  # Mandatory libraries  # Mandatory libraries
74    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
75    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
76    # Mandatory for tests
77      ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
78      ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
79  # Optional libraries and options  # Optional libraries and options
80    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
81    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
# Line 93  vars.AddVariables( Line 96  vars.AddVariables(
96    BoolVariable('umfpack', 'Enable UMFPACK', False),    BoolVariable('umfpack', 'Enable UMFPACK', False),
97    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
98    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
99      BoolVariable('boomeramg', 'Enable BoomerAMG', False),
100      ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
101      ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
102    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
103    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
104    ('lapack_libs', 'LAPACK libraries to link with', []),    ('lapack_libs', 'LAPACK libraries to link with', []),
# Line 116  vars.AddVariables( Line 122  vars.AddVariables(
122    EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),    EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123    # finer control over library building, intel aggressive global optimisation    # finer control over library building, intel aggressive global optimisation
124    # works with dynamic libraries on windows.    # works with dynamic libraries on windows.
125    ('share_esysutils', 'Build a dynamic esysUtils library', False),    ('build_shared', 'Build dynamic libraries only', False),
   ('share_paso', 'Build a dynamic paso library', False),  
126    ('sys_libs', 'Extra libraries to link with', []),    ('sys_libs', 'Extra libraries to link with', []),
127    ('escript_opts_version', 'Version of options file (do not specify on command line)'),    ('escript_opts_version', 'Version of options file (do not specify on command line)'),
128      ('SVN_VERSION', 'Do not use from options file', -2),
129  )  )
130    
131  ##################### Create environment and help text #######################  ##################### Create environment and help text #######################
# Line 278  env.Append(CCFLAGS = env['cc_flags']) Line 284  env.Append(CCFLAGS = env['cc_flags'])
284  # add system libraries  # add system libraries
285  env.AppendUnique(LIBS = env['sys_libs'])  env.AppendUnique(LIBS = env['sys_libs'])
286    
287  # Get the global Subversion revision number for the getVersion() method  
288  try:  global_revision=ARGUMENTS.get('SVN_VERSION', None)
289    if global_revision:
290        global_revision = re.sub(':.*', '', global_revision)
291        global_revision = re.sub('[^0-9]', '', global_revision)
292        if global_revision == '': global_revision='-2'
293    else:
294      # Get the global Subversion revision number for the getVersion() method
295      try:
296      global_revision = os.popen('svnversion -n .').read()      global_revision = os.popen('svnversion -n .').read()
297      global_revision = re.sub(':.*', '', global_revision)      global_revision = re.sub(':.*', '', global_revision)
298      global_revision = re.sub('[^0-9]', '', global_revision)      global_revision = re.sub('[^0-9]', '', global_revision)
299      if global_revision == '': global_revision='-2'      if global_revision == '': global_revision='-2'
300  except:    except:
301      global_revision = '-1'      global_revision = '-1'
302  env['svn_revision']=global_revision  env['svn_revision']=global_revision
303  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
304    
305  if IS_WINDOWS:  if IS_WINDOWS:
306      if not env['share_esysutils']:      if not env['build_shared']:
307          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])          env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
     if not env['share_paso']:  
308          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])          env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
309    
310  ###################### Copy required environment vars ########################  ###################### Copy required environment vars ########################
# Line 409  if not conf.CheckFunc('Py_Exit'): Line 421  if not conf.CheckFunc('Py_Exit'):
421      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
422      Exit(1)      Exit(1)
423    
424    # reuse conf to check for numpy header (optional)
425    if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
426        conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
427        conf.env['numpy_h']=True
428    else:
429        conf.env['numpy_h']=False
430    
431  # Commit changes to environment  # Commit changes to environment
432  env = conf.Finish()  env = conf.Finish()
433    
# Line 437  except ImportError: Line 456  except ImportError:
456      print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)      print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
457      Exit(1)      Exit(1)
458    
459    ######## CppUnit (required for tests)
460    
461    try:
462        cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
463        env.AppendUnique(CPPPATH = [cppunit_inc_path])
464        env.AppendUnique(LIBPATH = [cppunit_lib_path])
465        env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
466        env['cppunit']=True
467    except:
468        env['cppunit']=False
469    
470  ######## VTK (optional)  ######## VTK (optional)
471    
472  if env['pyvisi']:  if env['pyvisi']:
# Line 542  if env['visit']: Line 572  if env['visit']:
572    
573  ######## MPI (optional)  ######## MPI (optional)
574    
575    if env['mpi']=='no':
576        env['mpi']='none'
577    
578  env['usempi'] = env['mpi']!='none'  env['usempi'] = env['mpi']!='none'
579  mpi_inc_path=''  mpi_inc_path=''
580  mpi_lib_path=''  mpi_lib_path=''
# Line 558  if env['usempi']: Line 591  if env['usempi']:
591      if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:      if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
592          env.Append(CPPDEFINES = ['MPI_INCLUDED'])          env.Append(CPPDEFINES = ['MPI_INCLUDED'])
593    
594    ######## BOOMERAMG (optional)
595    
596    if env['mpi'] == 'none': env['boomeramg'] = False
597    
598    boomeramg_inc_path=''
599    boomeramg_lib_path=''
600    if env['boomeramg']:
601        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
602        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
603        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
604        env.AppendUnique(LIBS = env['boomeramg_libs'])
605        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
606        env.Append(CPPDEFINES = ['BOOMERAMG'])
607    
608  ######## ParMETIS (optional)  ######## ParMETIS (optional)
609    
610  if not env['usempi']: env['parmetis'] = False  if not env['usempi']: env['parmetis'] = False
# Line 576  if env['parmetis']: Line 623  if env['parmetis']:
623    
624  try:  try:
625      import subprocess      import subprocess
626      p=subprocess.Popen(['gmsh', '-version'], stderr=subprocess.PIPE)      p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
627      p.poll()      _,e=p.communicate()
628      env['gmsh']=True      if e.split().count("MPI"):
629            env['gmsh']='m'
630        else:
631            env['gmsh']='s'
632  except OSError:  except OSError:
633      env['gmsh']=False      env['gmsh']=False
634    
635    ######## PDFLaTeX (for documentation)
636    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
637        env['pdflatex']=True
638    else:
639        env['pdflatex']=False
640    
641  ######################## Summarize our environment ###########################  ######################## Summarize our environment ###########################
642    
643  # keep some of our install paths first in the list for the unit tests  # keep some of our install paths first in the list for the unit tests
# Line 620  else: Line 676  else:
676      print("          LAPACK:  DISABLED")      print("          LAPACK:  DISABLED")
677  d_list=[]  d_list=[]
678  e_list=[]  e_list=[]
679  for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','silo','visit':  for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit','vsl_random':
680      if env[i]: e_list.append(i)      if env[i]: e_list.append(i)
681      else: d_list.append(i)      else: d_list.append(i)
682  for i in e_list:  for i in e_list:
683      print("%16s:  YES"%i)      print("%16s:  YES"%i)
684  for i in d_list:  for i in d_list:
685      print("%16s:  DISABLED"%i)      print("%16s:  DISABLED"%i)
686  if env['gmsh']:  if env['cppunit']:
687        print("         CppUnit:  FOUND")
688    else:
689        print("         CppUnit:  NOT FOUND")
690    if env['gmsh']=='m':
691        print("            gmsh:  FOUND, MPI-ENABLED")
692    elif env['gmsh']=='s':
693      print("            gmsh:  FOUND")      print("            gmsh:  FOUND")
694  else:  else:
695      print("            gmsh:  NOT FOUND")      print("            gmsh:  NOT FOUND")
696  print("      vsl_random:  %s"%env['vsl_random'])  if env['numpy_h']:
697        print("   numpy headers:  FOUND")
698    else:
699        print("   numpy headers:  NOT FOUND")
700            
701  if ((fatalwarning != '') and (env['werror'])):  if ((fatalwarning != '') and (env['werror'])):
702      print("  Treating warnings as errors")      print("  Treating warnings as errors")
# Line 661  Export( Line 726  Export(
726    ]    ]
727  )  )
728    
 env.SConscript(dirs = ['tools/CppUnitTest/src'], variant_dir='$BUILD_DIR/$PLATFORM/tools/CppUnitTest', duplicate=0)  
729  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
730  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
731  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
732  env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
733  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
734    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
735  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)  env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
736  env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
737  env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)  env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
# Line 712  buildvars.write("mpi_inc_path=%s\n"%mpi_ Line 777  buildvars.write("mpi_inc_path=%s\n"%mpi_
777  buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)  buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
778  buildvars.write("lapack=%s\n"%env['lapack'])  buildvars.write("lapack=%s\n"%env['lapack'])
779  buildvars.write("pyvisi=%d\n"%env['pyvisi'])  buildvars.write("pyvisi=%d\n"%env['pyvisi'])
780  buildvars.write("vsl_random=%d"%int(env['vsl_random']))  buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
781  for i in 'netcdf','parmetis','papi','mkl','umfpack','silo','visit':  for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
782      buildvars.write("%s=%d\n"%(i, int(env[i])))      buildvars.write("%s=%d\n"%(i, int(env[i])))
783      if env[i]:      if env[i]:
784          buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))          buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
# Line 722  buildvars.close() Line 787  buildvars.close()
787    
788  ################### Targets to build and install libraries ###################  ################### Targets to build and install libraries ###################
789    
790  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
791  env.Alias('target_init', [target_init])  env.Alias('target_init', [target_init])
792    # delete buildvars upon cleanup
793    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
794    
795  # The headers have to be installed prior to build in order to satisfy  # The headers have to be installed prior to build in order to satisfy
796  # #include <paso/Common.h>  # #include <paso/Common.h>
# Line 736  env.Alias('install_paso', ['build_paso', Line 803  env.Alias('install_paso', ['build_paso',
803  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
804  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
805    
806    env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
807    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
808    
809    
810  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
811  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
812    
# Line 753  build_all_list = [] Line 824  build_all_list = []
824  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
825  build_all_list += ['build_paso']  build_all_list += ['build_paso']
826  build_all_list += ['build_escript']  build_all_list += ['build_escript']
827    build_all_list += ['build_pasowrap']
828  build_all_list += ['build_dudley']  build_all_list += ['build_dudley']
829  build_all_list += ['build_finley']  build_all_list += ['build_finley']
830  build_all_list += ['build_weipa']  build_all_list += ['build_weipa']
# Line 766  install_all_list += ['target_init'] Line 838  install_all_list += ['target_init']
838  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
839  install_all_list += ['install_paso']  install_all_list += ['install_paso']
840  install_all_list += ['install_escript']  install_all_list += ['install_escript']
841    install_all_list += ['install_pasowrap']
842  install_all_list += ['install_dudley']  install_all_list += ['install_dudley']
843  install_all_list += ['install_finley']  install_all_list += ['install_finley']
844  install_all_list += ['install_weipa']  install_all_list += ['install_weipa']
# Line 782  env.Default('install_all') Line 855  env.Default('install_all')
855    
856  ################## Targets to build and run the test suite ###################  ################## Targets to build and run the test suite ###################
857    
858  env.Alias('build_cppunittest', ['install_cppunittest_headers', 'build_cppunittest_lib'])  test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
859  env.Alias('install_cppunittest', ['build_cppunittest', 'install_cppunittest_lib'])  if not env['cppunit']:
860  env.Alias('run_tests', ['install_all', 'install_cppunittest_lib'])      env.Alias('run_tests', test_msg)
861  env.Alias('all_tests', ['install_all', 'install_cppunittest_lib', 'run_tests', 'py_tests'])  env.Alias('run_tests', ['install_all'])
862    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
863  env.Alias('build_full',['install_all','build_tests','build_py_tests'])  env.Alias('build_full',['install_all','build_tests','build_py_tests'])
864  env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')  env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
865    
# Line 808  if not IS_WINDOWS: Line 882  if not IS_WINDOWS:
882          print("Error attempting to write unittests file.")          print("Error attempting to write unittests file.")
883          Exit(1)          Exit(1)
884    
885        # delete utest.sh upon cleanup
886        env.Clean('target_init', 'utest.sh')
887    
888      # Make sure that the escript wrapper is in place      # Make sure that the escript wrapper is in place
889      if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):      if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
890          print("Copying escript wrapper.")          print("Copying escript wrapper.")
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