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revision 1343 by ksteube, Wed Nov 14 02:48:02 2007 UTC revision 1887 by ksteube, Wed Oct 15 03:26:25 2008 UTC
# Line 1  Line 1 
 #         Copyright 2006 by ACcESS MNRF  
 #  
 #              http://www.access.edu.au  
 #       Primary Business: Queensland, Australia  
 #  Licensed under the Open Software License version 3.0  
 #     http://www.opensource.org/licenses/osl-3.0.php  
   
 # top-level Scons configuration file for all esys13 modules  
 # Begin initialisation Section  
 # all of this section just intialises default environments and helper  
 # scripts. You shouldn't need to modify this section.  
 EnsureSConsVersion(0,96,91)  
 EnsurePythonVersion(2,3)  
   
 #===============================================================  
 #   import tools:  
 import glob  
 import sys, os, re  
 # Add our extensions  
 if sys.path.count('scons')==0: sys.path.append('scons')  
 import scons_extensions  
1    
2  #===============================================================  ########################################################
   
 tools_prefix="/usr"  
   
 #==============================================================================================      
 #      
 #    get the installation prefix  
3  #  #
4  prefix = ARGUMENTS.get('prefix', '/usr')  # Copyright (c) 2003-2008 by University of Queensland
5    # Earth Systems Science Computational Center (ESSCC)
6  # We may also need to know where python's site-packages subdirectory lives  # http://www.uq.edu.au/esscc
7  python_version = 'python%s.%s'%(sys.version_info[0],sys.version_info[1])  #
8    # Primary Business: Queensland, Australia
9  # Install as a standard python package in /usr/lib64 if available, else in /usr/lib  # Licensed under the Open Software License version 3.0
10  if os.path.isdir(  prefix+"/lib64/"+python_version+"/site-packages"):  # http://www.opensource.org/licenses/osl-3.0.php
11     sys_dir_packages =  prefix+"/lib64/"+python_version+"/site-packages/esys"  #
12     sys_dir_libraries = prefix+"/lib64"  ########################################################
 else:  
    sys_dir_packages =  prefix+"/lib/"+python_version+"/site-packages/esys"  
    sys_dir_libraries = prefix+"/lib"  
13    
 sys_dir_examples = prefix+"/share/doc/esys"  
14    
15  source_root = Dir('#.').abspath  EnsureSConsVersion(0,96,91)
16    EnsurePythonVersion(2,3)
17    
18  dir_packages = os.path.join(source_root,"esys")  import sys, os, re, socket
 dir_examples = os.path.join(source_root,"examples")  
 dir_libraries = os.path.join(source_root,"lib")  
   
 print "Source root is : ",source_root  
 print " Default packages local installation:    ", dir_packages  
 print " Default library local installation  ", dir_libraries  
 print " Default example local  installation:    ", dir_examples  
 print "Install prefix is: ", prefix  
 print " Default packages system installation:   ", sys_dir_packages  
 print " Default library system installation     ", sys_dir_libraries  
 print " Default example system installation:    ", sys_dir_examples  
   
 #==============================================================================================      
   
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 # Where to install?  
 #==============================================================================================      
 #      
 #    get the options file if present:  
 #  
 options_file = ARGUMENTS.get('options_file','')  
19    
20  if not os.path.isfile(options_file) :  # Add our extensions
21      options_file = False  if os.path.isdir('scons'): sys.path.append('scons')
22    import scons_extensions
23    
24  if not options_file :  # Use /usr/lib64 if available, else /usr/lib
25     import socket  usr_lib = '/usr/lib'
26     hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'
    tmp = os.path.join("scons",hostname+"_options.py")  
27    
28     if os.path.isfile(tmp) :  # The string python2.4 or python2.5
29        options_file = tmp  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])
30    
31    # MS Windows support, many thanks to PH
32  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS_PLATFORM = (os.name== "nt")
33    
34  # If you're not going to tell me then......  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)
 # FIXME: add one for the altix too.  
 if not options_file :  
    if IS_WINDOWS_PLATFORM :  
       options_file = "scons/windows_mscv71_options.py"  
    else:  
       options_file = "scons/linux_gcc_eg_options.py"  
35    
36  # and load it  # Read configuration options from file scons/<hostname>_options.py
37  opts = Options(options_file, ARGUMENTS)  hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])
38  #================================================================  tmp = os.path.join("scons",hostname+"_options.py")
39  #  options_file = ARGUMENTS.get('options_file', tmp)
40  #   check if UMFPACK is installed on the system:  if not os.path.isfile(options_file):
41  #    options_file = False
42  uf_root=None    print "Options file not found (expected '%s')" % tmp
 for i in [ 'UMFPACK', 'umfpack', 'ufsparse', 'UFSPARSE']:  
    if os.path.isdir(os.path.join(tools_prefix,'include',i)):  
        uf_root=i  
        print i," is used form ",tools_prefix  
        break  
 if not uf_root==None:  
    umf_path_default=os.path.join(tools_prefix,'include',uf_root)  
    umf_lib_path_default=os.path.join(tools_prefix,'lib')  
    umf_libs_default=['umfpack']  
    amd_path_default=os.path.join(tools_prefix,'include',uf_root)  
    amd_lib_path_default=os.path.join(tools_prefix,'lib')  
    amd_libs_default=['amd']  
    ufc_path_default=os.path.join(tools_prefix,'include',uf_root)  
43  else:  else:
44     umf_path_default=None    print "Options file is", options_file
    umf_lib_path_default=None  
    umf_libs_default=None  
    amd_path_default=None  
    amd_lib_path_default=None  
    amd_libs_default=None  
    ufc_path_default=None  
 #  
 #==========================================================================  
 #  
 #    python installation:  
 #  
 python_path_default=os.path.join(tools_prefix,'include','python%s.%s'%(sys.version_info[0],sys.version_info[1]))  
 python_lib_path_default=os.path.join(tools_prefix,'lib')  
 python_lib_default="python%s.%s"%(sys.version_info[0],sys.version_info[1])  
   
 #==========================================================================  
 #  
 #    boost installation:  
 #  
 boost_path_default=os.path.join(tools_prefix,'include')  
 boost_lib_path_default=os.path.join(tools_prefix,'lib')  
 boost_lib_default=['boost_python']  
45    
46  #==========================================================================  # Load options file and command-line arguments
47  #  opts = Options(options_file, ARGUMENTS)
 #    check if netCDF is installed on the system:  
 #  
 netCDF_path_default=os.path.join(tools_prefix,'include','netcdf-3')  
 netCDF_lib_path_default=os.path.join(tools_prefix,'lib')  
48    
49  if os.path.isdir(netCDF_path_default) and os.path.isdir(netCDF_lib_path_default):  ############ Load build options ################################
      useNetCDF_default='yes'  
      netCDF_libs_default=[ 'netcdf_c++', 'netcdf' ]  
 else:  
      useNetCDF_default='no'  
      netCDF_path_default=None  
      netCDF_lib_path_default=None  
      netCDF_libs_default=None  
50    
 #==========================================================================  
 #  
 #  MPI:  
 #  
 if IS_WINDOWS_PLATFORM:  
    useMPI_default='no'  
    mpi_path_default=None  
    mpi_lib_path_default=None  
    mpi_libs_default=[]  
    mpi_run_default=None  
 else:  
    useMPI_default='no'  
    mpi_root='/usr/local'  
    mpi_path_default=os.path.join(mpi_root,'include')  
    mpi_lib_path_default=os.path.join(mpi_root,'lib')  
    mpi_libs_default=[ 'mpich' , 'pthread', 'rt' ]  
    mpi_run_default='mpiexec -np 1'  
 #  
 #==========================================================================  
 #  
 #    compile:  
 #  
 cc_flags_default='-O3 -std=c99 -ffast-math -fpic -Wno-unknown-pragmas -ansi'  
 cc_flags_debug_default='-g -O0 -ffast-math -std=c99 -fpic -Wno-unknown-pragmas -ansi'  
 cxx_flags_default='--no-warn -ansi'  
 cxx_flags_debug_default='--no-warn -ansi -DDOASSERT'  
   
 #==============================================================================================      
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
51  opts.AddOptions(  opts.AddOptions(
52  # Where to install esys stuff  # Where to install esys stuff
53    ('incinstall', 'where the esys headers will be installed',             Dir('#.').abspath+'/include'),    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),
54    ('libinstall', 'where the esys libraries will be installed',           dir_libraries),    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),
55    ('pyinstall', 'where the esys python modules will be installed',       dir_packages),    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),
56    ('exinstall', 'where the esys examples will be installed',             dir_examples),    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),
57    ('sys_libinstall', 'where the system esys libraries will be installed',       sys_dir_libraries),    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),
   ('sys_pyinstall', 'where the system esys python modules will be installed',   sys_dir_packages),  
   ('sys_exinstall', 'where the system esys examples will be installed',         sys_dir_examples),  
   ('src_zipfile', 'the source zip file will be installed.',              Dir('#.').abspath+"/release/escript_src.zip"),  
   ('test_zipfile', 'the test zip file will be installed.',               Dir('#.').abspath+"/release/escript_tests.zip"),  
   ('src_tarfile', 'the source tar file will be installed.',              Dir('#.').abspath+"/release/escript_src.tar.gz"),  
   ('test_tarfile', 'the test tar file will be installed.',               Dir('#.').abspath+"/release/escript_tests.tar.gz"),  
   ('examples_tarfile', 'the examples tar file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.tar.gz"),  
   ('examples_zipfile', 'the examples zip file will be installed.',       Dir('#.').abspath+"/release/doc/escript_examples.zip"),  
   ('guide_pdf', 'name of the user guide in pdf format',                  Dir('#.').abspath+"/release/doc/user/guide.pdf"),  
   ('api_epydoc', 'name of the epydoc api docs directory',                Dir('#.').abspath+"/release/doc/epydoc"),  
   ('guide_html', 'name of the directory for user guide in html format',  Dir('#.').abspath+"/release/doc/user/html"),  
   ('api_doxygen', 'name of the doxygen api docs directory',prefix+"/release/doc/doxygen"),  
58  # Compilation options  # Compilation options
59    BoolOption('dodebug', 'Do you want a debug build?', 'no'),    BoolOption('dodebug', 'For backwards compatibility', 'no'),
60    BoolOption('bounds_check', 'Do you want extra array bounds checking?', 'no'),    BoolOption('usedebug', 'Do you want a debug build?', 'no'),
61    ('options_file', "Optional file containing preferred options. Ignored if it doesn't exist (default: scons/<hostname>_options.py)", options_file),    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),
62    ('cc_defines','C/C++ defines to use', None),    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),
63    ('cc_flags','C compiler flags to use (Release build)', cc_flags_default),    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below
64    ('cc_flags_debug', 'C compiler flags to use (Debug build)', cc_flags_debug_default),    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),
65    ('cxx_flags', 'C++ compiler flags to use (Release build)', cxx_flags_default),    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),
66    ('cxx_flags_debug', 'C++ compiler flags to use (Debug build)', cxx_flags_debug_default),    ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),
67    ('omp_flags', 'OpenMP compiler flags to use (Release build)', ''),    ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),
68    ('omp_flags_debug', 'OpenMP compiler flags to use (Debug build)', ''),    ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),
69    ('ar_flags', 'Static library archiver flags to use', None),    ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),
70    ('sys_libs', 'System libraries to link with', None),    ('cc_extra', 'Extra C/C++ flags', ''),
71    ('tar_flags','flags for zip files','-c -z'),    ('ld_extra', 'Extra linker flags', ''),
72  # MKL    ('sys_libs', 'System libraries to link with', []),
73    PathOption('mkl_path', 'Path to MKL includes', None),    ('ar_flags', 'Static library archiver flags to use', ''),
74    PathOption('mkl_lib_path', 'Path to MKL libs', None),    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),
75    ('mkl_libs', 'MKL libraries to link with', None),    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'yes'),
 # SCSL  
   PathOption('scsl_path', 'Path to SCSL includes', None),  
   PathOption('scsl_lib_path', 'Path to SCSL libs', None),  
   ('scsl_libs', 'SCSL libraries to link with', None),  
   ('scsl_libs_MPI', 'SCSL libraries to link with for MPI build', None),  
 # UMFPACK  
   PathOption('ufc_path', 'Path to UFconfig includes', ufc_path_default),  
   PathOption('umf_path', 'Path to UMFPACK includes', umf_path_default),  
   PathOption('umf_lib_path', 'Path to UMFPACK libs', umf_lib_path_default),  
   ('umf_libs', 'UMFPACK libraries to link with', umf_libs_default),  
 # AMD (used by UMFPACK)  
   PathOption('amd_path', 'Path to AMD includes', amd_path_default),  
   PathOption('amd_lib_path', 'Path to AMD libs', amd_lib_path_default),  
   ('amd_libs', 'AMD libraries to link with', amd_libs_default),  
 # TRILINOS  
   PathOption('trilinos_path', 'Path to TRILINOS includes', None),  
   PathOption('trilinos_lib_path', 'Path to TRILINOS libs', None),  
   ('trilinos_libs', 'TRILINOS libraries to link with', None),  
 # BLAS  
   PathOption('blas_path', 'Path to BLAS includes', None),  
   PathOption('blas_lib_path', 'Path to BLAS libs', None),  
   ('blas_libs', 'BLAS libraries to link with', None),  
 # netCDF  
   ('useNetCDF', 'switch on/off the usage of netCDF', useNetCDF_default),  
   PathOption('netCDF_path', 'Path to netCDF includes', netCDF_path_default),  
   PathOption('netCDF_lib_path', 'Path to netCDF libs', netCDF_lib_path_default),  
   ('netCDF_libs', 'netCDF C++ libraries to link with', netCDF_libs_default),  
76  # Python  # Python
77  # locations of include files for python    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),
78  # FIXME: python_path should be python_inc_path and the same for boost etc.    ('python_lib_path', 'Path to Python libs', usr_lib),
79    PathOption('python_path', 'Path to Python includes', python_path_default),    ('python_libs', 'Python libraries to link with', [python_version]),
   PathOption('python_lib_path', 'Path to Python libs', python_lib_path_default),  
   ('python_lib', 'Python libraries to link with', python_lib_default),  
80    ('python_cmd', 'Python command', 'python'),    ('python_cmd', 'Python command', 'python'),
81  # Boost  # Boost
82    PathOption('boost_path', 'Path to Boost includes', boost_path_default),    ('boost_path', 'Path to Boost includes', '/usr/include'),
83    PathOption('boost_lib_path', 'Path to Boost libs', boost_lib_path_default),    ('boost_lib_path', 'Path to Boost libs', usr_lib),
84    ('boost_lib', 'Boost libraries to link with', boost_lib_default),    ('boost_libs', 'Boost libraries to link with', ['boost_python']),
85  # Doc building  # NetCDF
86  #  PathOption('doxygen_path', 'Path to Doxygen executable', None),    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),
87  #  PathOption('epydoc_path', 'Path to Epydoc executable', None),    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),
88  # PAPI    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),
89    PathOption('papi_path', 'Path to PAPI includes', None),    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),
   PathOption('papi_lib_path', 'Path to PAPI libs', None),  
   ('papi_libs', 'PAPI libraries to link with', None),  
   ('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', None),  
90  # MPI  # MPI
91    BoolOption('useMPI', 'Compile parallel version using MPI', useMPI_default),    BoolOption('useMPI', 'For backwards compatibility', 'no'),
92      BoolOption('usempi', 'Compile parallel version using MPI', 'no'),
93    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),
94    PathOption('mpi_path', 'Path to MPI includes', mpi_path_default),    ('mpi_path', 'Path to MPI includes', '/usr/include'),
95    ('mpi_run', 'mpirun name' , mpi_run_default),    ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),
96    PathOption('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)',mpi_lib_path_default),    ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),
97    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', mpi_libs_default)    ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),
98    # ParMETIS
99      BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),
100      ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),
101      ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),
102      ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),
103    # PAPI
104      BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),
105      ('papi_path', 'Path to PAPI includes', '/usr/include'),
106      ('papi_lib_path', 'Path to PAPI libs', usr_lib),
107      ('papi_libs', 'PAPI libraries to link with', ['papi']),
108      BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),
109    # MKL
110      BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),
111      ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),
112      ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),
113      ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),
114    # UMFPACK
115      BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),
116      ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),
117      ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),
118      ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),
119      ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),
120    # AMD (used by UMFPACK)
121      ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),
122      ('amd_lib_path', 'Path to AMD libs', usr_lib),
123      ('amd_libs', 'AMD libraries to link with', ['amd']),
124    # BLAS (used by UMFPACK)
125      ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),
126      ('blas_lib_path', 'Path to BLAS libs', usr_lib),
127      ('blas_libs', 'BLAS libraries to link with', ['blas'])
128  )  )
129  #=================================================================================================  
130  #  ############ Specify which compilers to use ####################
131  #   Note: On the Altix the intel compilers are not automatically  
132  #   detected by scons intelc.py script. The Altix has a different directory  # intelc uses regular expressions improperly and emits a warning about
133  #   path and in some locations the "modules" facility is used to support  # failing to find the compilers.  This warning can be safely ignored.
 #   multiple compiler versions. This forces the need to import the users PATH  
 #   environment which isn't the "scons way"  
 #   This doesn't impact linux and windows which will use the default compiler (g++ or msvc, or the intel compiler if it is installed on both platforms)  
 #   FIXME: Perhaps a modification to intelc.py will allow better support for ia64 on altix  
 #  
134    
135  if IS_WINDOWS_PLATFORM:  if IS_WINDOWS_PLATFORM:
136        env = Environment(tools = ['default', 'msvc'], options = opts)        env = Environment(tools = ['default', 'msvc'], options = opts)
137  else:  else:
138     if os.uname()[4]=='ia64':     if socket.gethostname().split('.')[0] == 'service0':
139          env = Environment(tools = ['default', 'intelc'], options = opts)
140       elif os.uname()[4]=='ia64':
141        env = Environment(tools = ['default', 'intelc'], options = opts)        env = Environment(tools = ['default', 'intelc'], options = opts)
142        if env['CXX'] == 'icpc':        if env['CXX'] == 'icpc':
143           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not). FIXME: this behaviour could be directly incorporated into scons intelc.py           env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)
144     else:     else:
145        env = Environment(tools = ['default'], options = opts)        env = Environment(tools = ['default'], options = opts)
146  Help(opts.GenerateHelpText(env))  Help(opts.GenerateHelpText(env))
147    
148  if env['bounds_check']:  ############ Fill in compiler options if not set above #########
    env.Append(CPPDEFINES = [ 'BOUNDS_CHECK' ])  
    env.Append(CXXDEFINES = [ 'BOUNDS_CHECK' ])  
149    
150  #=================================================================================================  # Backwards compatibility: allow dodebug=yes and useMPI=yes
151  #  if env['dodebug']: env['usedebug'] = 1
152  #     Initialise Scons Build Environment  if env['useMPI']: env['usempi'] = 1
153  #     check for user environment variables we are interested in  
154  try:  # Default compiler options (override allowed in hostname_options.py, but should not be necessary)
155     tmp = os.environ['PYTHONPATH']  # For both C and C++ you get: cc_flags and either the optim flags or debug flags
156     env['ENV']['PYTHONPATH'] = tmp  
157  except KeyError:  if env["CC"] == "icc":
158     pass    # Intel compilers
159      cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
160      cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"
161      cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
162      omp_optim     = "-openmp -openmp_report0"
163      omp_debug     = "-openmp -openmp_report0"
164      omp_libs      = ['guide', 'pthread']
165      pedantic      = ""
166    elif env["CC"] == "gcc":
167      # GNU C on any system
168      cc_flags      = "-fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER"
169      cc_optim      = "-O3"
170      cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
171      omp_optim     = ""
172      omp_debug     = ""
173      omp_libs      = []
174      pedantic      = "-pedantic-errors -Wno-long-long"
175    elif env["CC"] == "cl":
176      # Microsoft Visual C on Windows
177      cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"
178      cc_optim      = "/O2 /Op /MT /W3"
179      cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"
180      omp_optim     = ""
181      omp_debug     = ""
182      omp_libs      = []
183      pedantic      = ""
184    
185    # If not specified in hostname_options.py then set them here
186    if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags
187    if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim
188    if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug
189    if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim
190    if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug
191    if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs
192    
193    # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty
194    if not env["useopenmp"]:
195      env['omp_optim'] = ""
196      env['omp_debug'] = ""
197      env['omp_libs'] = []
198    
199    if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0
200    
201    ############ Copy environment variables into scons env #########
202    
203    try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']
204    except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1
205    
206    try: env['ENV']['PATH'] = os.environ['PATH']
207    except KeyError: pass
208    
209    try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
210    except KeyError: pass
211    
212    try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']
213    except KeyError: pass
214    
215    try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']
216    except KeyError: pass
217    
218    try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']
219    except KeyError: pass
220    
221    try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']
222    except KeyError: pass
223    
224    try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']
225    except KeyError: pass
226    
227    try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']
228    except KeyError: pass
229    
230    try: env['ENV']['HOME'] = os.environ['HOME']
231    except KeyError: pass
232    
233    # Configure for test suite
234    env.PrependENVPath('PYTHONPATH', prefix)
235    env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])
236    
237    env['ENV']['ESCRIPT_ROOT'] = prefix
238    
239    ############ Set up paths for Configure() ######################
240    
241    # Make a copy of an environment
242    # Use env.Clone if available, but fall back on env.Copy for older version of scons
243    def clone_env(env):
244      if 'Clone' in dir(env): return env.Clone()    # scons-0.98
245      else:                   return env.Copy() # scons-0.96
246    
247    # Add cc option -I<Escript>/trunk/include
248    env.Append(CPPPATH      = [Dir('include')])
249    
250    # Add cc option -L<Escript>/trunk/lib
251    env.Append(LIBPATH      = [Dir(env['libinstall'])])
252    
253  env.PrependENVPath('PYTHONPATH', source_root)  env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])
254    
255  try:  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])
256     omp_num_threads = os.environ['OMP_NUM_THREADS']  if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])
 except KeyError:  
    omp_num_threads = 1  
 env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  
257    
258  try:  if env['usepedantic']: env.Append(CCFLAGS = pedantic)
    path = os.environ['PATH']  
    env['ENV']['PATH'] = path  
 except KeyError:  
    omp_num_threads = 1  
259    
260  env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  # MS Windows
261    if IS_WINDOWS_PLATFORM:
262      env.PrependENVPath('PATH',    [env['boost_lib_path']])
263      env.PrependENVPath('PATH',    [env['libinstall']])
264      if env['usenetcdf']:
265        env.PrependENVPath('PATH',  [env['netCDF_lib_path']])
266    
267    env.Append(ARFLAGS = env['ar_flags'])
268    
269  # Copy some variables from the system environment to the build environment  # Get the global Subversion revision number for getVersion() method
270  try:  try:
271     env['ENV']['DISPLAY'] = os.environ['DISPLAY']     global_revision = os.popen("svnversion -n .").read()
272     env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']     global_revision = re.sub(":.*", "", global_revision)
273     home_temp = os.environ['HOME']   # MPICH2's mpd needs $HOME to find $HOME/.mpd.conf     global_revision = re.sub("[^0-9]", "", global_revision)
274     env['ENV']['HOME'] = home_temp  except:
275  except KeyError:     global_revision="-1"
276     pass  if global_revision == "": global_revision="-2"
277    env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])
278    
279  try:  ############ numarray (required) ###############################
    tmp = os.environ['PATH']  
    env['ENV']['PATH'] = tmp  
 except KeyError:  
    pass  
280    
281  try:  try:
282     tmp = os.environ['LD_LIBRARY_PATH']    from numarray import identity
283     env['ENV']['LD_LIBRARY_PATH'] = tmp  except ImportError:
284  except KeyError:    print "Cannot import numarray, you need to set your PYTHONPATH"
285     pass    sys.exit(1)
 #==========================================================================  
 #  
 #    Add some customer builders  
 #  
 py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  
 env.Append(BUILDERS = {'PyCompile' : py_builder});  
286    
287  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed',  ############ C compiler (required) #############################
                               src_suffix=env['PROGSUFFIX'], single_source=True)  
288    
289  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  # Create a Configure() environment for checking existence of required libraries and headers
290    conf = Configure(clone_env(env))
291    
292  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  # Test that the compiler is working
293  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  if not conf.CheckFunc('printf'):
294      print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])
295      sys.exit(1)
296    
297  # Convert the options which are held in environment variable into python variables for ease of handling and configure compilation options  if conf.CheckFunc('gethostname'):
298  try:    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
    incinstall = env['incinstall']  
    env.Append(CPPPATH = [incinstall,])  
 except KeyError:  
    incinstall = None  
 try:  
    libinstall = env['libinstall']  
    env.Append(LIBPATH = [libinstall,]) # Adds -L for building of libescript.so libfinley.so escriptcpp.so finleycpp.so  
    env.PrependENVPath('LD_LIBRARY_PATH', libinstall)  
    if IS_WINDOWS_PLATFORM :  
       env.PrependENVPath('PATH', libinstall)  
       env.PrependENVPath('PATH', env['boost_lib_path'])  
 except KeyError:  
    libinstall = None  
 try:  
    pyinstall = env['pyinstall'] # all targets will install into pyinstall/esys but PYTHONPATH points at straight pyinstall so you go import esys.escript etc  
 except KeyError:  
    pyinstall = None  
299    
300  try:  ############ python libraries (required) #######################
    cc_defines = env['cc_defines']  
    env.Append(CPPDEFINES = cc_defines)  
 except KeyError:  
    pass  
 try:  
    flags = env['ar_flags']  
    env.Append(ARFLAGS = flags)  
 except KeyError:  
    ar_flags = None  
 try:  
    sys_libs = env['sys_libs']  
 except KeyError:  
    sys_libs = []  
301    
302  try:  conf.env.AppendUnique(CPPPATH       = [env['python_path']])
303     tar_flags = env['tar_flags']  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])
304     env.Replace(TARFLAGS = tar_flags)  conf.env.AppendUnique(LIBS      = [env['python_libs']])
 except KeyError:  
    pass  
305    
306  try:  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs
    exinstall = env['exinstall']  
 except KeyError:  
    exinstall = None  
 try:  
    sys_libinstall = env['sys_libinstall']  
 except KeyError:  
    sys_libinstall = None  
 try:  
    sys_pyinstall = env['sys_pyinstall']  
 except KeyError:  
    sys_pyinstall = None  
 try:  
    sys_exinstall = env['sys_exinstall']  
 except KeyError:  
    sys_exinstall = None  
307    
308  # ====================== debugging ===================================  if not conf.CheckCHeader('Python.h'):
309  try:    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])
310     dodebug = env['dodebug']    sys.exit(1)
311  except KeyError:  if not conf.CheckFunc('Py_Main'):
312     dodebug = None    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])
313      sys.exit(1)
314    
315  # === switch on omp ===================================================  ############ boost (required) ##################################
 try:  
   omp_flags = env['omp_flags']  
 except KeyError:  
   omp_flags = ''  
316    
317  try:  conf.env.AppendUnique(CPPPATH       = [env['boost_path']])
318    omp_flags_debug = env['omp_flags_debug']  conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])
319  except KeyError:  conf.env.AppendUnique(LIBS      = [env['boost_libs']])
   omp_flags_debug = ''  
320    
321  # ========= use mpi? =====================================================  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs
322  try:  
323     useMPI = env['useMPI']  if not conf.CheckCXXHeader('boost/python.hpp'):
324  except KeyError:    print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])
325     useMPI = None    sys.exit(1)
326  # ========= set compiler flags ===========================================  if not conf.CheckFunc('PyObject_SetAttr'):
327      print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])
328  if dodebug:    sys.exit(1)
329      try:  
330        flags = env['cc_flags_debug'] + ' ' + omp_flags_debug  # Commit changes to environment
331        env.Append(CCFLAGS = flags)  env = conf.Finish()
332      except KeyError:  
333        pass  ############ VTK (optional) ####################################
334  else:  
335     try:  if env['usevtk']:
336        flags = env['cc_flags'] + ' ' + omp_flags    try:
337        env.Append(CCFLAGS = flags)      import vtk
338     except KeyError:      env['usevtk'] = 1
339        pass    except ImportError:
340  if dodebug:      env['usevtk'] = 0
341       try:  
342          flags = env['cxx_flags_debug']  # Add VTK to environment env if it was found
343          env.Append(CXXFLAGS = flags)  if env['usevtk']:
344       except KeyError:    env.Append(CPPDEFINES = ['USE_VTK'])
345          pass  
346    ############ NetCDF (optional) #################################
347    
348    conf = Configure(clone_env(env))
349    
350    if env['usenetcdf']:
351      conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])
352      conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])
353      conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])
354      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs
355    
356    if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0
357    if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0
358    
359    # Add NetCDF to environment env if it was found
360    if env['usenetcdf']:
361      env = conf.Finish()
362      env.Append(CPPDEFINES = ['USE_NETCDF'])
363  else:  else:
364       try:    conf.Finish()
365          flags = env['cxx_flags']  
366          env.Append(CXXFLAGS = flags)  ############ PAPI (optional) ###################################
367       except KeyError:  
368          pass  # Start a new configure environment that reflects what we've already found
369  try:  conf = Configure(clone_env(env))
370       if env['CC'] == 'gcc': env.Append(CCFLAGS = "-pedantic-errors -Wno-long-long")  
371  except:  if env['usepapi']:
372       pass    conf.env.AppendUnique(CPPPATH = [env['papi_path']])
373      conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])
374      conf.env.AppendUnique(LIBS    = [env['papi_libs']])
375      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs
376    
377  # ============= set mkl (but only of no MPI) =====================================  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0
378  if not useMPI:  if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0
379     try:  
380        includes = env['mkl_path']  # Add PAPI to environment env if it was found
381        env.Append(CPPPATH = [includes,])  if env['usepapi']:
382     except KeyError:    env = conf.Finish()
383        pass    env.Append(CPPDEFINES = ['BLOCKPAPI'])
   
    try:  
       lib_path = env['mkl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       mkl_libs = env['mkl_libs']  
    except KeyError:  
       mkl_libs = []  
384  else:  else:
385       mkl_libs = []    conf.Finish()
386    
387    ############ MKL (optional) ####################################
388    
389    # Start a new configure environment that reflects what we've already found
390    conf = Configure(clone_env(env))
391    
392  # ============= set scsl (but only of no MPI) =====================================  if env['usemkl']:
393  if not useMPI:    conf.env.AppendUnique(CPPPATH = [env['mkl_path']])
394     try:    conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])
395        includes = env['scsl_path']    conf.env.AppendUnique(LIBS    = [env['mkl_libs']])
396        env.Append(CPPPATH = [includes,])    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['scsl_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
     
    try:  
       scsl_libs = env['scsl_libs']  
    except KeyError:  
       scsl_libs = [ ]  
397    
398    if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0
399    if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0
400    
401    # Add MKL to environment env if it was found
402    if env['usemkl']:
403      env = conf.Finish()
404      env.Append(CPPDEFINES = ['MKL'])
405  else:  else:
406      scsl_libs =  []    conf.Finish()
407    
408    ############ UMFPACK (optional) ################################
409    
410    # Start a new configure environment that reflects what we've already found
411    conf = Configure(clone_env(env))
412    
413  # ============= set TRILINOS (but only with MPI) =====================================  if env['useumfpack']:
414  if useMPI:    conf.env.AppendUnique(CPPPATH = [env['ufc_path']])
415     try:    conf.env.AppendUnique(CPPPATH = [env['umf_path']])
416        includes = env['trilinos_path']    conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])
417        env.Append(CPPPATH = [includes,])    conf.env.AppendUnique(LIBS    = [env['umf_libs']])
418     except KeyError:    conf.env.AppendUnique(CPPPATH = [env['amd_path']])
419        pass    conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])
420      conf.env.AppendUnique(LIBS    = [env['amd_libs']])
421     try:    conf.env.AppendUnique(CPPPATH = [env['blas_path']])
422        lib_path = env['trilinos_lib_path']    conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])
423        env.Append(LIBPATH = [lib_path,])    conf.env.AppendUnique(LIBS    = [env['blas_libs']])
424     except KeyError:    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs
425        pass    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs
426      conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs
427     try:  
428        trilinos_libs = env['trilinos_libs']  if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0
429     except KeyError:  if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0
430        trilinos_libs = []  
431    # Add UMFPACK to environment env if it was found
432    if env['useumfpack']:
433      env = conf.Finish()
434      env.Append(CPPDEFINES = ['UMFPACK'])
435  else:  else:
436       trilinos_libs = []    conf.Finish()
437    
438    ############ Add the compiler flags ############################
439    
440  # ============= set umfpack (but only without MPI) =====================================  # Enable debug by choosing either cc_debug or cc_optim
441  umf_libs=[ ]  if env['usedebug']:
442  if not useMPI:    env.Append(CCFLAGS        = env['cc_debug'])
443     try:    env.Append(CCFLAGS        = env['omp_debug'])
       includes = env['umf_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['umf_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       umf_libs = env['umf_libs']  
       umf_libs+=umf_libs  
    except KeyError:  
       pass  
   
    try:  
       includes = env['ufc_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       includes = env['amd_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['amd_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       amd_libs = env['amd_libs']  
       umf_libs+=amd_libs  
    except KeyError:  
       pass  
   
 # ============= set TRILINOS (but only with MPI) =====================================  
 if useMPI:  
    try:  
       includes = env['trilinos_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['trilinos_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
    except KeyError:  
       pass  
   
    try:  
       trilinos_libs = env['trilinos_libs']  
    except KeyError:  
       trilinos_libs = []  
444  else:  else:
445       trilinos_libs = []    env.Append(CCFLAGS        = env['cc_optim'])
446      env.Append(CCFLAGS        = env['omp_optim'])
447    
448  # ============= set blas =====================================  # Always use cc_flags
449  try:  env.Append(CCFLAGS      = env['cc_flags'])
450     includes = env['blas_path']  env.Append(LIBS         = [env['omp_libs']])
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
451    
452  try:  ############ MPI (optional) ####################################
    lib_path = env['blas_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
453    
454  try:  # Create a modified environment for MPI programs (identical to env if usempi=no)
455     blas_libs = env['blas_libs']  env_mpi = clone_env(env)
 except KeyError:  
    blas_libs = [ ]  
456    
457  # ========== netcdf ====================================  # Start a new configure environment that reflects what we've already found
458  try:  conf = Configure(clone_env(env_mpi))
459     useNetCDF = env['useNetCDF']  
460  except KeyError:  if env_mpi['usempi']:
461     useNetCDF = 'yes'    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])
462     pass    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])
463          conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])
464  if useNetCDF == 'yes':    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs
465     try:  
466        netCDF_libs = env['netCDF_libs']  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0
467     except KeyError:  if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0
468        pass  
469    # Add MPI to environment env_mpi if it was found
470     env.Append(LIBS = netCDF_libs)  if env_mpi['usempi']:
471     env.Append(CPPDEFINES = [ 'USE_NETCDF' ])    env_mpi = conf.Finish()
472     try:    env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])
       includes = env['netCDF_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['netCDF_lib_path']  
       env.Append(LIBPATH = [ lib_path, ])  
       if IS_WINDOWS_PLATFORM :  
          env.PrependENVPath('PATH', lib_path)  
    except KeyError:  
       pass  
473  else:  else:
474     print "Warning: Installation is not configured with netCDF. Some I/O function may not be available."    conf.Finish()
    netCDF_libs=[ ]  
475    
476  # ====================== boost ======================================  env['usempi'] = env_mpi['usempi']
477  try:  
478     includes = env['boost_path']  ############ ParMETIS (optional) ###############################
479     env.Append(CPPPATH = [includes,])  
480  except KeyError:  # Start a new configure environment that reflects what we've already found
481     pass  conf = Configure(clone_env(env_mpi))
482  try:  
483     lib_path = env['boost_lib_path']  if not env_mpi['usempi']: env_mpi['useparmetis'] = 0
484     env.Append(LIBPATH = [lib_path,])  
485     if IS_WINDOWS_PLATFORM :  if env_mpi['useparmetis']:
486        env.PrependENVPath('PATH', lib_path)    conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])
487  except KeyError:    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])
488     pass    conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])
489  try:    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs
490     boost_lib = env['boost_lib']  
491  except KeyError:  if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0
492     boost_lib = None  if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0
493  # ====================== python ======================================  
494  try:  # Add ParMETIS to environment env_mpi if it was found
495     includes = env['python_path']  if env_mpi['useparmetis']:
496     env.Append(CPPPATH = [includes,])    env_mpi = conf.Finish()
497  except KeyError:    env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])
    pass  
 try:  
    lib_path = env['python_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    python_lib = env['python_lib']  
 except KeyError:  
    python_lib = None  
 # =============== documentation =======================================  
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 # =============== PAPI =======================================  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 # ============= set mpi =====================================  
 if useMPI:  
    env.Append(CPPDEFINES=['PASO_MPI',])  
    try:  
       includes = env['mpi_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
    try:  
       lib_path = env['mpi_lib_path']  
       env.Append(LIBPATH = [lib_path,])  
       env['ENV']['LD_LIBRARY_PATH']+=":"+lib_path  
    except KeyError:  
       pass  
    try:  
       mpi_libs = env['mpi_libs']  
    except KeyError:  
       mpi_libs = []  
   
    try:  
       mpi_run = env['mpi_run']  
    except KeyError:  
       mpi_run = ''  
   
    try:  
        mpich_ignore_cxx_seek=env['MPICH_IGNORE_CXX_SEEK']  
        env.Append(CPPDEFINES = [ mpich_ignore_cxx_seek ] )  
    except KeyError:  
       pass  
498  else:  else:
499    mpi_libs=[]    conf.Finish()
   mpi_run = mpi_run_default  
 # =========== zip files ===========================================  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
 try:  
    papi_instrument_solver = env['papi_instrument_solver']  
 except KeyError:  
    papi_instrument_solver = None  
500    
501    env['useparmetis'] = env_mpi['useparmetis']
502    
503  # ============= and some helpers =====================================  ############ Summarize our environment #########################
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 try:  
    src_zipfile = env.File(env['src_zipfile'])  
 except KeyError:  
    src_zipfile = None  
 try:  
    test_zipfile = env.File(env['test_zipfile'])  
 except KeyError:  
    test_zipfile = None  
 try:  
    examples_zipfile = env.File(env['examples_zipfile'])  
 except KeyError:  
    examples_zipfile = None  
504    
505  try:  print ""
506     src_tarfile = env.File(env['src_tarfile'])  print "Summary of configuration (see ./config.log for information)"
507  except KeyError:  print " Using python libraries"
508     src_tarfile = None  print " Using numarray"
509  try:  print " Using boost"
510     test_tarfile = env.File(env['test_tarfile'])  if env['usenetcdf']: print "    Using NetCDF"
511  except KeyError:  else: print "   Not using NetCDF"
512     test_tarfile = None  if env['usevtk']: print "   Using VTK"
513  try:  else: print "   Not using VTK"
514     examples_tarfile = env.File(env['examples_tarfile'])  if env['usemkl']: print "   Using MKL"
515  except KeyError:  else: print "   Not using MKL"
516     examples_tarfile = None  if env['useumfpack']: print "   Using UMFPACK"
517    else: print "   Not using UMFPACK"
518    if env['useopenmp']: print "    Using OpenMP"
519    else: print "   Not using OpenMP"
520    if env['usempi']: print "   Using MPI"
521    else: print "   Not using MPI"
522    if env['useparmetis']: print "  Using ParMETIS"
523    else: print "   Not using ParMETIS (requires MPI)"
524    if env['usepapi']: print "  Using PAPI"
525    else: print "   Not using PAPI"
526    if env['usedebug']: print " Compiling for debug"
527    else: print "   Not compiling for debug"
528    print " Installing in", prefix
529    print ""
530    
531  try:  ############ Delete option-dependent files #####################
    guide_pdf = env.File(env['guide_pdf'])  
 except KeyError:  
    guide_pdf = None  
532    
533  try:  Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))
534     guide_html_index = env.File('index.htm',env['guide_html'])  Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))
535  except KeyError:  Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))
536     guide_html_index = None  if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))
537    
538  try:  ############ Add some custom builders ##########################
    api_epydoc = env.Dir(env['api_epydoc'])  
 except KeyError:  
    api_epydoc = None  
539    
540  try:  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
541     api_doxygen = env.Dir(env['api_doxygen'])  env.Append(BUILDERS = {'PyCompile' : py_builder});
 except KeyError:  
    api_doxygen = None  
542    
543  try:  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
544     svn_pipe = os.popen("svnversion -n .")  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
    global_revision = svn_pipe.readlines()  
    svn_pipe.close()  
    global_revision = re.sub(":.*", "", global_revision[0])  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision = "0"  
 env.Append(CPPDEFINES = "SVN_VERSION="+global_revision)  
545    
546  # Python install - esys __init__.py  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
547  init_target = env.Command(pyinstall+'/__init__.py', None, Touch('$TARGET'))  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
548    
549  # FIXME: exinstall and friends related to examples are not working.  ############ Build the subdirectories ##########################
550  build_target = env.Alias('build',[libinstall,incinstall,pyinstall,init_target])  
551    Export(["env", "env_mpi", "clone_env"])
552    
 env.Default(build_target)  
   
 # Zipgets  
 env.Alias('release_src',[ src_zipfile, src_tarfile ])  
 env.Alias('release_tests',[ test_zipfile, test_tarfile])  
 env.Alias('release_examples',[ examples_zipfile, examples_tarfile])  
 env.Alias('examples_zipfile',examples_zipfile)  
 env.Alias('examples_tarfile',examples_tarfile)  
 env.Alias('api_epydoc',api_epydoc)  
 env.Alias('api_doxygen',api_doxygen)  
 env.Alias('guide_html_index',guide_html_index)  
 env.Alias('guide_pdf', guide_pdf)  
 env.Alias('docs',[ 'release_examples', 'guide_pdf', api_epydoc, api_doxygen, guide_html_index])  
 env.Alias('release', ['release_src', 'release_tests', 'docs'])  
   
 env.Alias('build_tests',build_target)    # target to build all C++ tests  
 env.Alias('build_py_tests',build_target) # target to build all python tests  
 env.Alias('build_all_tests', [ 'build_tests', 'build_py_tests' ] ) # target to build all python tests  
 env.Alias('run_tests', 'build_tests')   # target to run all C++ test  
 env.Alias('py_tests', 'build_py_tests') # taget to run all released python tests  
 env.Alias('all_tests', ['run_tests', 'py_tests']) # target to run all C++ and released python tests  
   
   
 # Allow sconscripts to see the env  
 Export(["IS_WINDOWS_PLATFORM", "env", "incinstall", "libinstall", "pyinstall", "dodebug", "mkl_libs", "scsl_libs", "umf_libs", "blas_libs", "netCDF_libs", "useNetCDF", "mpi_run",  
     "boost_lib", "python_lib", "doxygen_path", "epydoc_path", "papi_libs",  
         "sys_libs", "test_zipfile", "src_zipfile", "test_tarfile", "src_tarfile", "examples_tarfile", "examples_zipfile", "trilinos_libs", "mpi_libs", "papi_instrument_solver",  
         "guide_pdf", "guide_html_index", "api_epydoc", "api_doxygen", "useMPI" ])  
   
 # End initialisation section  
 # Begin configuration section  
 # adds this file and the scons option directore to the source tar  
 release_srcfiles=[env.File('SConstruct'),env.Dir('lib'),env.Dir('include'),]+[ env.File(x) for x in glob.glob('scons/*.py') ]  
 release_testfiles=[env.File('README_TESTS'),]  
 env.Zip(src_zipfile, release_srcfiles)  
 env.Zip(test_zipfile, release_testfiles)  
 try:  
    env.Tar(src_tarfile, release_srcfiles)  
    env.Tar(test_tarfile, release_testfiles)  
 except AttributeError:  
    pass  
 # Insert new components to be build here  
 # FIXME: might be nice to replace this verbosity with a list of targets and some  
 # FIXME: nifty python to create the lengthy but very similar env.Sconscript lines  
 # Third Party libraries  
553  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)
 # C/C++ Libraries  
554  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)
 # bruce is removed for now as it doesn't really do anything  
 # env.SConscript(dirs = ['bruce/src'], build_dir='build/$PLATFORM/bruce', duplicate=0)  
555  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)
556  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)
557  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)
# Line 894  env.SConscript(dirs = ['doc'], build_dir Line 560  env.SConscript(dirs = ['doc'], build_dir
560  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)
561  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)
562  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)
563  #env.SConscript(dirs = ['../test'], build_dir='../test/build', duplicate=0)  env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)
564    
565    ############ Remember what optimizations we used ###############
566    
567    remember_list = []
568    
569    if env['usedebug']:
570      remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))
571    
572    if env['usempi']:
573      remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))
574    
575    if env['omp_optim'] != '':
576      remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))
577    
578    env.Alias('remember_options', remember_list)
579    
580    ############ Targets to build and install libraries ############
581    
582    target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))
583    env.Alias('target_init', [target_init])
584    
585    # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>
586    env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])
587    env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])
588    
589    env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])
590    env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])
591    
592    env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])
593    env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])
594    
595    env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])
596    env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])
597    
598    # Now gather all the above into a couple easy targets: build_all and install_all
599    build_all_list = []
600    build_all_list += ['build_esysUtils']
601    build_all_list += ['build_paso']
602    build_all_list += ['build_escript']
603    build_all_list += ['build_finley']
604    if env['usempi']:       build_all_list += ['target_pythonMPI_exe']
605    if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']
606    env.Alias('build_all', build_all_list)
607    
608    install_all_list = []
609    install_all_list += ['target_init']
610    install_all_list += ['install_esysUtils']
611    install_all_list += ['install_paso']
612    install_all_list += ['install_escript']
613    install_all_list += ['install_finley']
614    install_all_list += ['target_install_pyvisi_py']
615    install_all_list += ['target_install_modellib_py']
616    install_all_list += ['target_install_pycad_py']
617    if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']
618    if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']
619    install_all_list += ['remember_options']
620    env.Alias('install_all', install_all_list)
621    
622    # Default target is install
623    env.Default('install_all')
624    
625    ############ Targets to build and run the test suite ###########
626    
627    env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])
628    env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])
629    env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])
630    env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])
631    
632    ############ Targets to build the documentation ################
633    
634  syslib_install_target = env.installDirectory(sys_libinstall,libinstall)  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])
 syspy_install_target = env.installDirectory(sys_pyinstall,pyinstall,recursive=True)  
635    
 install_target = env.Alias("install", env.Flatten([syslib_install_target, syspy_install_target]) )  

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