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revision 2026 by jfenwick, Tue Nov 11 01:56:54 2008 UTC revision 4078 by jfenwick, Fri Nov 16 07:50:49 2012 UTC
# Line 1  Line 1 
1    ##############################################################################
 ########################################################  
2  #  #
3  # Copyright (c) 2003-2008 by University of Queensland  # Copyright (c) 2003-2012 by University of Queensland
4  # Earth Systems Science Computational Center (ESSCC)  # http://www.uq.edu.au
 # http://www.uq.edu.au/esscc  
5  #  #
6  # Primary Business: Queensland, Australia  # Primary Business: Queensland, Australia
7  # Licensed under the Open Software License version 3.0  # Licensed under the Open Software License version 3.0
8  # http://www.opensource.org/licenses/osl-3.0.php  # http://www.opensource.org/licenses/osl-3.0.php
9  #  #
10  ########################################################  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)
11    # Development since 2012 by School of Earth Sciences
12    #
13  EnsureSConsVersion(0,96,91)  ##############################################################################
 EnsurePythonVersion(2,3)  
   
 import sys, os, re, socket  
   
 # Add our extensions  
 if os.path.isdir('scons'): sys.path.append('scons')  
 import scons_extensions  
14    
15  # Use /usr/lib64 if available, else /usr/lib  EnsureSConsVersion(0,98,1)
16  usr_lib = '/usr/lib'  EnsurePythonVersion(2,5)
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
17    
18  # The string python2.4 or python2.5  import sys, os, platform, re
19  python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  from distutils import sysconfig
20    from site_init import *
21    from subprocess import PIPE, Popen
22    
23    # Version number to check for in options file. Increment when new features are
24    # added or existing options changed.
25    REQUIRED_OPTS_VERSION=201
26    
27  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
28  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS = (os.name == 'nt')
29    
30  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  ########################## Determine options file ############################
31    # 1. command line
32    # 2. scons/<hostname>_options.py
33    # 3. name as part of a cluster
34    options_file=ARGUMENTS.get('options_file', None)
35    if not options_file:
36        ext_dir = os.path.join(os.getcwd(), 'scons')
37        hostname = platform.node().split('.')[0]
38        for name in hostname, effectiveName(hostname):
39            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
40            options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
41            if os.path.isfile(options_file): break
42    
 # Read configuration options from file scons/<hostname>_options.py  
 hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
 tmp = os.path.join("scons",hostname+"_options.py")  
 options_file = ARGUMENTS.get('options_file', tmp)  
43  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
44    options_file = False      print("\nWARNING:\nOptions file %s" % options_file)
45    print "Options file not found (expected '%s')" % tmp      print("not found! Default options will be used which is most likely suboptimal.")
46  else:      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
47    print "Options file is", options_file      print("subdirectory and customize it to your needs.\n")
48        options_file = None
49  # Load options file and command-line arguments  
50  opts = Options(options_file, ARGUMENTS)  ############################### Build options ################################
51    
52  ############ Load build options ################################  default_prefix='/usr'
53    mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
54  opts.AddOptions(  lapack_flavours=('none', 'clapack', 'mkl')
55  # Where to install esys stuff  
56    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),  vars = Variables(options_file, ARGUMENTS)
57    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),  vars.AddVariables(
58    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
59    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
60    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
61  # Compilation options    BoolVariable('verbose', 'Output full compile/link lines', False),
62    BoolOption('dodebug', 'For backwards compatibility', 'no'),  # Compiler/Linker options
63    BoolOption('usedebug', 'Do you want a debug build?', 'no'),    ('cc', 'Path to C compiler', 'default'),
64    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
65    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
66    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
67    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
68    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),    ('cc_extra', 'Extra C compiler flags', ''),
69    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
   ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  
   ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  
   ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),  
   ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),  
   ('cc_extra', 'Extra C/C++ flags', ''),  
70    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
71    ('sys_libs', 'System libraries to link with', []),    BoolVariable('werror','Treat compiler warnings as errors', True),
72    ('ar_flags', 'Static library archiver flags to use', ''),    BoolVariable('debug', 'Compile with debug flags', False),
73    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
74    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),    ('omp_flags', 'OpenMP compiler flags', 'default'),
75    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
76  # Python  # Mandatory libraries
77    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
78    ('python_lib_path', 'Path to Python libs', usr_lib),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
79    ('python_libs', 'Python libraries to link with', [python_version]),  # Mandatory for tests
80    ('python_cmd', 'Python command', 'python'),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
81  # Boost    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
82    ('boost_path', 'Path to Boost includes', '/usr/include'),  # Optional libraries and options
83    ('boost_lib_path', 'Path to Boost libs', usr_lib),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
84    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
85  # NetCDF    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
86    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    BoolVariable('netcdf', 'Enable netCDF file support', False),
87    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
88    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
89    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
90  # MPI    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
91    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
92    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    BoolVariable('papi', 'Enable PAPI', False),
93    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('mpi_path', 'Path to MPI includes', '/usr/include'),  
   ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),  
   ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),  
 # ParMETIS  
   BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),  
   ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),  
   ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),  
   ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),  
 # PAPI  
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
94    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
95    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
96  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
97    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
98    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
99    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
100    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
101  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
102    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
103    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
104    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
105    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
106    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
107  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
108    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
109    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
110    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
111  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
112    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
113    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
114    ('blas_libs', 'BLAS libraries to link with', ['blas']),    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
115  # An option for specifying the compiler tools set (see windows branch).  # Advanced settings
116    ('tools_names', 'allow control over the tools in the env setup', ['intelc'])    #dudley_assemble_flags = -funroll-loops      to actually do something
117      ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
118      # To enable passing function pointers through python
119      BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
120      # An option for specifying the compiler tools (see windows branch)
121      ('tools_names', 'Compiler tools to use', ['default']),
122      ('env_export', 'Environment variables to be passed to tools',[]),
123      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
124      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
125      # finer control over library building, intel aggressive global optimisation
126      # works with dynamic libraries on windows.
127      ('build_shared', 'Build dynamic libraries only', False),
128      ('sys_libs', 'Extra libraries to link with', []),
129      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
130      ('SVN_VERSION', 'Do not use from options file', -2),
131      ('pythoncmd', 'which python to compile with','python'),
132      ('usepython3', 'Is this a python3 build? (experimental)', False),
133      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
134      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
135      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
136      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
137  )  )
138    
139  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
   
 # intelc uses regular expressions improperly and emits a warning about  
 # failing to find the compilers.  This warning can be safely ignored.  
   
 if IS_WINDOWS_PLATFORM:  
       env = Environment(options = opts)  
       env = Environment(tools = ['default'] + env['tools_names'],  
                         options = opts)  
 else:  
    if socket.gethostname().split('.')[0] == 'service0':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 ############ Fill in compiler options if not set above #########  
   
 # Backwards compatibility: allow dodebug=yes and useMPI=yes  
 if env['dodebug']: env['usedebug'] = 1  
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
   fatalwarning      = ""        # Switch to turn warnings into errors  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER -isystem /usr/include/boost/ -isystem /usr/include/python2.5/ -Wno-sign-compare"  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = "-pedantic-errors -Wno-long-long"  
   fatalwarning      = "-Werror"  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   fatalwarning      = ""  
 elif env["CC"] == "icl":  
   # intel C on Windows, see windows_msvc71_options.py for a start  
   pedantic      = ""  
   fatalwarning      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
140    
141  try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  # Intel's compiler uses regular expressions improperly and emits a warning
142  except KeyError: pass  # about failing to find the compilers. This warning can be safely ignored.
143    
144  try: env['ENV']['HOME'] = os.environ['HOME']  # PATH is needed so the compiler, linker and tools are found if they are not
145  except KeyError: pass  # in default locations.
146    env = Environment(tools = ['default'], options = vars,
147  # Configure for test suite                    ENV = {'PATH': os.environ['PATH']})
148  env.PrependENVPath('PYTHONPATH', prefix)                    
149  env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
150    #set the vars for clang
151  env['ENV']['ESCRIPT_ROOT'] = prefix  def mkclang(env):
152      env['CC']='clang'
153  ############ Set up paths for Configure() ######################    env['CXX']='clang++'
154                      
155  # Make a copy of an environment                    
156  # Use env.Clone if available, but fall back on env.Copy for older version of scons  if env['tools_names'] != 'default':
157  def clone_env(env):      zz=env['tools_names']
158    if 'Clone' in dir(env): return env.Clone()    # scons-0.98      if 'clang' in zz:
159    else:                   return env.Copy() # scons-0.96          zz.remove('clang')
160            zz.insert(0, mkclang)
161        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
162                          ENV = {'PATH' : os.environ['PATH']})
163    
164    if options_file:
165        opts_valid=False
166        if 'escript_opts_version' in env.Dictionary() and \
167            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
168                opts_valid=True
169        if opts_valid:
170            print("Using options in %s." % options_file)
171        else:
172            print("\nOptions file %s" % options_file)
173            print("is outdated! Please update the file by examining one of the TEMPLATE")
174            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
175            Exit(1)
176    
177    # Generate help text (scons -h)
178    Help(vars.GenerateHelpText(env))
179    
180    # Check for superfluous options
181    if len(vars.UnknownVariables())>0:
182        for k in vars.UnknownVariables():
183            print("Unknown option '%s'" % k)
184        Exit(1)
185    
186    #################### Make sure install directories exist #####################
187    
188    env['BUILD_DIR']=Dir(env['build_dir']).abspath
189    prefix=Dir(env['prefix']).abspath
190    env['incinstall'] = os.path.join(prefix, 'include')
191    env['bininstall'] = os.path.join(prefix, 'bin')
192    env['libinstall'] = os.path.join(prefix, 'lib')
193    env['pyinstall']  = os.path.join(prefix, 'esys')
194    if not os.path.isdir(env['bininstall']):
195        os.makedirs(env['bininstall'])
196    if not os.path.isdir(env['libinstall']):
197        os.makedirs(env['libinstall'])
198    if not os.path.isdir(env['pyinstall']):
199        os.makedirs(env['pyinstall'])
200    
201    env.Append(CPPPATH = [env['incinstall']])
202    env.Append(LIBPATH = [env['libinstall']])
203    
204    ################# Fill in compiler options if not set above ##################
205    
206    if env['cc'] != 'default': env['CC']=env['cc']
207    if env['cxx'] != 'default': env['CXX']=env['cxx']
208    
209    # version >=9 of intel C++ compiler requires use of icpc to link in C++
210    # runtimes (icc does not)
211    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
212        env['LINK'] = env['CXX']
213    
214    # default compiler/linker options
215    cc_flags = ''
216    cc_optim = ''
217    cc_debug = ''
218    omp_flags = ''
219    omp_ldflags = ''
220    fatalwarning = '' # switch to turn warnings into errors
221    sysheaderopt = '' # how to indicate that a header is a system header
222    
223    # env['CC'] might be a full path
224    cc_name=os.path.basename(env['CC'])
225    
226    if cc_name == 'icc':
227        # Intel compiler
228        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
229        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
230        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
231        omp_flags   = "-openmp -openmp_report0"
232        omp_ldflags = "-openmp -openmp_report0 -lpthread"
233        fatalwarning = "-Werror"
234    elif cc_name[:3] == 'gcc':
235        # GNU C on any system
236        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
237        cc_optim     = "-O3"
238        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
239        omp_flags    = "-fopenmp"
240        omp_ldflags  = "-fopenmp"
241        fatalwarning = "-Werror"
242        sysheaderopt = "-isystem"
243    elif cc_name == 'cl':
244        # Microsoft Visual C on Windows
245        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
246        cc_optim     = "/O2 /Op /W3"
247        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
248        fatalwarning = "/WX"
249    elif cc_name == 'icl':
250        # Intel C on Windows
251        cc_flags     = '/EHsc /GR /MD'
252        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
253        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
254        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
255        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
256    
257    # set defaults if not otherwise specified
258    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
259    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
260    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
261    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
262    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
263    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
264    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
265    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
266    
267    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
268    
269    if env['usepython3']:
270        env.Append(CPPDEFINES=['ESPYTHON3'])
271    
272    # set up the autolazy values
273    if env['forcelazy'] == 'on':
274        env.Append(CPPDEFINES=['FAUTOLAZYON'])
275    elif env['forcelazy'] == 'off':
276        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
277    
278    # set up the collective resolve values
279    if env['forcecollres'] == 'on':
280        env.Append(CPPDEFINES=['FRESCOLLECTON'])
281    elif env['forcecollres'] == 'off':
282        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
283    
284    # allow non-standard C if requested
285    if env['iknowwhatimdoing']:
286        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
287    
288    # Disable OpenMP if no flags provided
289    if env['openmp'] and env['omp_flags'] == '':
290       print("OpenMP requested but no flags provided - disabling OpenMP!")
291       env['openmp'] = False
292    
293    if env['openmp']:
294        env.Append(CCFLAGS = env['omp_flags'])
295        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
296    else:
297        env['omp_flags']=''
298        env['omp_ldflags']=''
299    
300  # Add cc option -I<Escript>/trunk/include  # add debug/non-debug compiler flags
301  env.Append(CPPPATH      = [Dir('include')])  if env['debug']:
302        env.Append(CCFLAGS = env['cc_debug'])
303    else:
304        env.Append(CCFLAGS = env['cc_optim'])
305    
306  # Add cc option -L<Escript>/trunk/lib  # always add cc_flags
307  env.Append(LIBPATH      = [Dir(env['libinstall'])])  env.Append(CCFLAGS = env['cc_flags'])
308    
309  env.Append(CPPDEFINES = ['ESCRIPT_EXPORTS', 'FINLEY_EXPORTS'])  # add system libraries
310    env.AppendUnique(LIBS = env['sys_libs'])
311    
 if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  
 if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])  
312    
313  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  global_revision=ARGUMENTS.get('SVN_VERSION', None)
314    if global_revision:
315        global_revision = re.sub(':.*', '', global_revision)
316        global_revision = re.sub('[^0-9]', '', global_revision)
317        if global_revision == '': global_revision='-2'
318    else:
319      # Get the global Subversion revision number for the getVersion() method
320      try:
321        global_revision = os.popen('svnversion -n .').read()
322        global_revision = re.sub(':.*', '', global_revision)
323        global_revision = re.sub('[^0-9]', '', global_revision)
324        if global_revision == '': global_revision='-2'
325      except:
326        global_revision = '-1'
327    env['svn_revision']=global_revision
328    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
329    
330    if IS_WINDOWS:
331        if not env['build_shared']:
332            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
333            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
334    
335    ###################### Copy required environment vars ########################
336    
337    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
338    if IS_WINDOWS:
339        LD_LIBRARY_PATH_KEY='PATH'
340        env['ENV']['LD_LIBRARY_PATH']=''
341    else:
342        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
343    
344  # MS Windows  # the following env variables are exported for the unit tests
 if IS_WINDOWS_PLATFORM:  
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
345    
346  env.Append(ARFLAGS = env['ar_flags'])  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
347        try:
348            env['ENV'][key] = os.environ[key]
349        except KeyError:
350            env['ENV'][key] = 1
351    
352    env_export=env['env_export']
353    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP'])
354    
355    for key in set(env_export):
356        try:
357            env['ENV'][key] = os.environ[key]
358        except KeyError:
359            pass
360    
 # Get the global Subversion revision number for getVersion() method  
361  try:  try:
362     global_revision = os.popen("svnversion -n .").read()      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
363     global_revision = re.sub(":.*", "", global_revision)  except KeyError:
364     global_revision = re.sub("[^0-9]", "", global_revision)      pass
365  except:  
366     global_revision="-1"  # these shouldn't be needed
367  if global_revision == "": global_revision="-2"  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
368  env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  #    try:
369    #        env['ENV'][key] = os.environ[key]
370  ############ numarray (required) ###############################  #    except KeyError:
371    #        pass
372    
373  try:  try:
374    from numarray import identity      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
375  except ImportError:  except KeyError:
376    print "Cannot import numarray, you need to set your PYTHONPATH"      pass
   sys.exit(1)  
   
 ############ C compiler (required) #############################  
   
 # Create a Configure() environment for checking existence of required libraries and headers  
 conf = Configure(clone_env(env))  
   
 # Test that the compiler is working  
 if not conf.CheckFunc('printf'):  
   print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  
   sys.exit(1)  
   
 if conf.CheckFunc('gethostname'):  
   conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
   
 ############ python libraries (required) #######################  
   
 conf.env.AppendUnique(CPPPATH       = [env['python_path']])  
 conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['python_libs']])  
377    
378  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs  ######################## Add some custom builders ############################
   
 if not conf.CheckCHeader('Python.h'):  
   print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('Py_Main'):  
   print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])  
   sys.exit(1)  
   
 ############ boost (required) ##################################  
   
 conf.env.AppendUnique(CPPPATH       = [env['boost_path']])  
 conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['boost_libs']])  
   
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  
   
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('PyObject_SetAttr'):  
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
   
 # Commit changes to environment  
 env = conf.Finish()  
379    
380  ############ VTK (optional) ####################################  if env['pythoncmd']=='python':
381        py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
 if env['usevtk']:  
   try:  
     import vtk  
     env['usevtk'] = 1  
   except ImportError:  
     env['usevtk'] = 0  
   
 # Add VTK to environment env if it was found  
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
   
 ############ NetCDF (optional) #################################  
   
 conf = Configure(clone_env(env))  
   
 if env['usenetcdf']:  
   conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
   conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs  
   
 if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
   
 # Add NetCDF to environment env if it was found  
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
382  else:  else:
383    conf.Finish()      py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
384    env.Append(BUILDERS = {'PyCompile' : py_builder});
385    
386    runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
387    env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
388    
389  ############ PAPI (optional) ###################################  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
390    env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
391    
392  # Start a new configure environment that reflects what we've already found  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
393  conf = Configure(clone_env(env))  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
394    
395  if env['usepapi']:  ############################ Dependency checks ###############################
   conf.env.AppendUnique(CPPPATH = [env['papi_path']])  
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs  
396    
397  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  # Create a Configure() environment to check for compilers and python
398  if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  conf = Configure(env.Clone())
399    
400  # Add PAPI to environment env if it was found  ######## Test that the compilers work
401  if env['usepapi']:  
402    env = conf.Finish()  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
403    env.Append(CPPDEFINES = ['BLOCKPAPI'])      if not conf.CheckCC():
404            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
405            Exit(1)
406        if not conf.CheckCXX():
407            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
408            Exit(1)
409  else:  else:
410    conf.Finish()      if not conf.CheckFunc('printf', language='c'):
411            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
412  ############ MKL (optional) ####################################          Exit(1)
413        if not conf.CheckFunc('printf', language='c++'):
414            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
415            Exit(1)
416    
417  # Start a new configure environment that reflects what we've already found  if conf.CheckFunc('gethostname'):
418  conf = Configure(clone_env(env))      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
419    
420  if env['usemkl']:  ######## Python headers & library (required)
   conf.env.AppendUnique(CPPPATH = [env['mkl_path']])  
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs  
421    
422  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  #First we check to see if the config file has specified
423  if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  ##Where to find the filae. Ideally, this should be automatic
424    #But we need to deal with the case where python is not in its INSTALL
425    #Directory
426    # Use the python scons is running
427    if env['pythoncmd']=='python':
428        python_inc_path=sysconfig.get_python_inc()
429        if IS_WINDOWS:
430            python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
431        elif env['PLATFORM']=='darwin':
432            python_lib_path=sysconfig.get_config_var('LIBPL')
433        else:
434            python_lib_path=sysconfig.get_config_var('LIBDIR')
435    
436        #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
437        if IS_WINDOWS:
438            python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
439        else:
440            python_libs=['python'+sysconfig.get_python_version()]
441    
442  # Add MKL to environment env if it was found  #if we want to use a python other than the one scons is running
 if env['usemkl']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['MKL'])  
443  else:  else:
444    conf.Finish()      initstring='from __future__ import print_function;from distutils import sysconfig;'
445        if env['pythonlibname']!='':
446  ############ UMFPACK (optional) ################################          python_libs=env['pythonlibname']
447        else:   # work it out by calling python    
448  # Start a new configure environment that reflects what we've already found          if IS_WINDOWS:
449  conf = Configure(clone_env(env))              cmd='print("python%s%s"%(sys.version_info[0], sys.version_info[1]))'
450            else:
451                cmd='print("python"+sysconfig.get_python_version())'
452            p=Popen([env['pythoncmd'], '-c', initstring+cmd], stdout=PIPE)
453            python_libs=p.stdout.readline()
454            if env['usepython3']:       # This is to convert unicode str into py2 string
455                python_libs=python_libs.encode() # If scons runs on py3 then this must be rethought
456            p.wait()
457            python_libs=python_libs.strip()
458    
459      
460        # Now we know whether we are using python3 or not
461        p=Popen([env['pythoncmd'], '-c',  initstring+'print(sysconfig.get_python_inc())'], stdout=PIPE)
462        python_inc_path=p.stdout.readline()
463        if env['usepython3']:
464             python_inc_path=python_inc_path.encode()
465        p.wait()  
466        python_inc_path=python_inc_path.strip()
467        if IS_WINDOWS:
468            cmd="os.path.join(sysconfig.get_config_var('prefix'), 'libs')"
469        elif env['PLATFORM']=='darwin':
470            cmd="sysconfig.get_config_var(\"LIBPL\")"
471        else:
472            cmd="sysconfig.get_config_var(\"LIBDIR\")"
473    
474        p=Popen([env['pythoncmd'], '-c', initstring+'print('+cmd+')'], stdout=PIPE)
475        python_lib_path=p.stdout.readline()
476        if env['usepython3']:
477            python_lib_path=python_lib_path.decode()
478        p.wait()
479        python_lib_path=python_lib_path.strip()
480    
481    #Check for an override from the config file.
482    #Ideally, this should be automatic
483    #But we need to deal with the case where python is not in its INSTALL
484    #Directory
485    if env['pythonlibpath']!='':
486        python_lib_path=env['pythonlibpath']
487    
488  if env['useumfpack']:  if env['pythonincpath']!='':
489    conf.env.AppendUnique(CPPPATH = [env['ufc_path']])      python_inc_path=env['pythonincpath']
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs  
490    
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
491    
492  # Add UMFPACK to environment env if it was found  if sysheaderopt == '':
493  if env['useumfpack']:      conf.env.AppendUnique(CPPPATH = [python_inc_path])
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
494  else:  else:
495    conf.Finish()      conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
496    
497  ############ Add the compiler flags ############################  conf.env.AppendUnique(LIBPATH = [python_lib_path])
498    conf.env.AppendUnique(LIBS = python_libs)
499    # The wrapper script needs to find the libs
500    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
501    
502  # Enable debug by choosing either cc_debug or cc_optim  if not conf.CheckCHeader('Python.h'):
503  if env['usedebug']:      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
504    env.Append(CCFLAGS        = env['cc_debug'])      Exit(1)
505    env.Append(CCFLAGS        = env['omp_debug'])  if not conf.CheckFunc('Py_Exit'):
506        print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
507        Exit(1)
508    
509    ## reuse conf to check for numpy header (optional)
510    if env['usepython3']:
511        # FIXME: This is until we can work out how to make the checks in python 3
512        conf.env['numpy_h']=False
513  else:  else:
514    env.Append(CCFLAGS        = env['cc_optim'])      if conf.CheckCXXHeader(['Python.h','numpy/ndarrayobject.h']):
515    env.Append(CCFLAGS        = env['omp_optim'])          conf.env.Append(CPPDEFINES = ['HAVE_NUMPY_H'])
516            conf.env['numpy_h']=True
517  # Always use cc_flags      else:
518  env.Append(CCFLAGS      = env['cc_flags'])          conf.env['numpy_h']=False
 env.Append(LIBS         = [env['omp_libs']])  
   
 ############ MPI (optional) ####################################  
   
 # Create a modified environment for MPI programs (identical to env if usempi=no)  
 env_mpi = clone_env(env)  
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
519    
520  if env_mpi['usempi']:  # Commit changes to environment
521    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  env = conf.Finish()
   conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs  
522    
523  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  ######## boost (required)
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
524    
525  # Add MPI to environment env_mpi if it was found  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
526  if env_mpi['usempi']:  if sysheaderopt == '':
527    env_mpi = conf.Finish()      env.AppendUnique(CPPPATH = [boost_inc_path])
   env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])  
528  else:  else:
529    conf.Finish()      # This is required because we can't -isystem /usr/include since it breaks
530        # std includes
531  env['usempi'] = env_mpi['usempi']      if os.path.normpath(boost_inc_path) == '/usr/include':
532            conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
533        else:
534            env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
535    
536    env.AppendUnique(LIBPATH = [boost_lib_path])
537    env.AppendUnique(LIBS = env['boost_libs'])
538    env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
539    
540    ######## numpy (required)
541    
542    if not detectModule(env, 'numpy'):
543        print("Cannot import numpy. If it is installed try setting your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
544        Exit(1)
545    
546  ############ ParMETIS (optional) ###############################  ######## CppUnit (required for tests)
547    
548  # Start a new configure environment that reflects what we've already found  try:
549  conf = Configure(clone_env(env_mpi))      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
550        env.AppendUnique(CPPPATH = [cppunit_inc_path])
551  if not env_mpi['usempi']: env_mpi['useparmetis'] = 0      env.AppendUnique(LIBPATH = [cppunit_lib_path])
552        env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
553  if env_mpi['useparmetis']:      env['cppunit']=True
554    conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  except:
555    conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])      env['cppunit']=False
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs  
556    
557  if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  ######## sympy (optional)
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
558    
559  # Add ParMETIS to environment env_mpi if it was found  if detectModule(env, 'sympy'):
560  if env_mpi['useparmetis']:      env['sympy'] = True
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])  
561  else:  else:
562    conf.Finish()      print("Cannot import sympy. Symbolic toolbox and nonlinear PDEs will not be available.")
563        env['sympy'] = False
 env['useparmetis'] = env_mpi['useparmetis']  
   
 ############ Now we switch on Warnings as errors ###############  
564    
565  #this needs to be done after configuration because the scons test files have warnings in them  ######## netCDF (optional)
566    
567  if ((fatalwarning != "") and (env['usewarnings'])):  netcdf_inc_path=''
568    env.Append(CCFLAGS        = fatalwarning)  netcdf_lib_path=''
569    env_mpi.Append(CCFLAGS        = fatalwarning)  if env['netcdf']:
570        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
571        env.AppendUnique(CPPPATH = [netcdf_inc_path])
572        env.AppendUnique(LIBPATH = [netcdf_lib_path])
573        env.AppendUnique(LIBS = env['netcdf_libs'])
574        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
575        env.Append(CPPDEFINES = ['USE_NETCDF'])
576    
577    ######## PAPI (optional)
578    
579    papi_inc_path=''
580    papi_lib_path=''
581    if env['papi']:
582        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
583        env.AppendUnique(CPPPATH = [papi_inc_path])
584        env.AppendUnique(LIBPATH = [papi_lib_path])
585        env.AppendUnique(LIBS = env['papi_libs'])
586        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
587        env.Append(CPPDEFINES = ['BLOCKPAPI'])
588    
589    ######## MKL (optional)
590    
591    mkl_inc_path=''
592    mkl_lib_path=''
593    if env['mkl']:
594        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
595        env.AppendUnique(CPPPATH = [mkl_inc_path])
596        env.AppendUnique(LIBPATH = [mkl_lib_path])
597        env.AppendUnique(LIBS = env['mkl_libs'])
598        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
599        env.Append(CPPDEFINES = ['MKL'])
600    
601    ######## UMFPACK (optional)
602    
603    umfpack_inc_path=''
604    umfpack_lib_path=''
605    if env['umfpack']:
606        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
607        env.AppendUnique(CPPPATH = [umfpack_inc_path])
608        env.AppendUnique(LIBPATH = [umfpack_lib_path])
609        env.AppendUnique(LIBS = env['umfpack_libs'])
610        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
611        env.Append(CPPDEFINES = ['UMFPACK'])
612    
613    ######## LAPACK (optional)
614    
615    if env['lapack']=='mkl' and not env['mkl']:
616        print("mkl_lapack requires MKL!")
617        Exit(1)
618    
619    env['uselapack'] = env['lapack']!='none'
620    lapack_inc_path=''
621    lapack_lib_path=''
622    if env['uselapack']:
623        header='clapack.h'
624        if env['lapack']=='mkl':
625            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
626            header='mkl_lapack.h'
627        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
628        env.AppendUnique(CPPPATH = [lapack_inc_path])
629        env.AppendUnique(LIBPATH = [lapack_lib_path])
630        env.AppendUnique(LIBS = env['lapack_libs'])
631        env.Append(CPPDEFINES = ['USE_LAPACK'])
632    
633    ######## Silo (optional)
634    
635    silo_inc_path=''
636    silo_lib_path=''
637    if env['silo']:
638        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
639        env.AppendUnique(CPPPATH = [silo_inc_path])
640        env.AppendUnique(LIBPATH = [silo_lib_path])
641        # Note that we do not add the libs since they are only needed for the
642        # weipa library and tools.
643        #env.AppendUnique(LIBS = [env['silo_libs']])
644    
645    ######## VSL random numbers (optional)
646    if env['vsl_random']:
647        env.Append(CPPDEFINES = ['MKLRANDOM'])
648    
649    ######## VisIt (optional)
650    
651    visit_inc_path=''
652    visit_lib_path=''
653    if env['visit']:
654        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
655        env.AppendUnique(CPPPATH = [visit_inc_path])
656        env.AppendUnique(LIBPATH = [visit_lib_path])
657    
658    ######## MPI (optional)
659    
660    if env['mpi']=='no':
661        env['mpi']='none'
662    
663    env['usempi'] = env['mpi']!='none'
664    mpi_inc_path=''
665    mpi_lib_path=''
666    if env['usempi']:
667        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
668        env.AppendUnique(CPPPATH = [mpi_inc_path])
669        env.AppendUnique(LIBPATH = [mpi_lib_path])
670        env.AppendUnique(LIBS = env['mpi_libs'])
671        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
672        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
673        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
674        # On the other hand MPT and OpenMPI don't define the latter so we have to
675        # do that here
676        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
677            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
678    
679    ######## BOOMERAMG (optional)
680    
681    if env['mpi'] == 'none': env['boomeramg'] = False
682    
683    boomeramg_inc_path=''
684    boomeramg_lib_path=''
685    if env['boomeramg']:
686        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
687        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
688        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
689        env.AppendUnique(LIBS = env['boomeramg_libs'])
690        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
691        env.Append(CPPDEFINES = ['BOOMERAMG'])
692    
693    ######## ParMETIS (optional)
694    
695    if not env['usempi']: env['parmetis'] = False
696    
697    parmetis_inc_path=''
698    parmetis_lib_path=''
699    if env['parmetis']:
700        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
701        env.AppendUnique(CPPPATH = [parmetis_inc_path])
702        env.AppendUnique(LIBPATH = [parmetis_lib_path])
703        env.AppendUnique(LIBS = env['parmetis_libs'])
704        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
705        env.Append(CPPDEFINES = ['USE_PARMETIS'])
706    
707  ############ Summarize our environment #########################  ######## gmsh (optional, for tests)
708    
709  print ""  try:
710  print "Summary of configuration (see ./config.log for information)"      p=Popen(['gmsh', '-info'], stderr=PIPE)
711  print " Using python libraries"      _,e=p.communicate()
712  print " Using numarray"      if e.split().count("MPI"):
713  print " Using boost"          env['gmsh']='m'
714  if env['usenetcdf']: print "    Using NetCDF"      else:
715  else: print "   Not using NetCDF"          env['gmsh']='s'
716  if env['usevtk']: print "   Using VTK"  except OSError:
717  else: print "   Not using VTK"      env['gmsh']=False
718  if env['usemkl']: print "   Using MKL"  
719  else: print "   Not using MKL"  ######## PDFLaTeX (for documentation)
720  if env['useumfpack']: print "   Using UMFPACK"  if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
721  else: print "   Not using UMFPACK"      env['pdflatex']=True
722  if env['useopenmp']: print "    Using OpenMP"  else:
723  else: print "   Not using OpenMP"      env['pdflatex']=False
 if env['usempi']: print "   Using MPI"  
 else: print "   Not using MPI"  
 if env['useparmetis']: print "  Using ParMETIS"  
 else: print "   Not using ParMETIS (requires MPI)"  
 if env['usepapi']: print "  Using PAPI"  
 else: print "   Not using PAPI"  
 if env['usedebug']: print " Compiling for debug"  
 else: print "   Not compiling for debug"  
 print " Installing in", prefix  
 if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"  
 else: print "   Not treating warnings as errors"  
 print ""  
724    
725  ############ Delete option-dependent files #####################  ######################## Summarize our environment ###########################
726    
727  Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  # keep some of our install paths first in the list for the unit tests
728  Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
729  Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  env.PrependENVPath('PYTHONPATH', prefix)
730  if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  env['ENV']['ESCRIPT_ROOT'] = prefix
731    
732  ############ Add some custom builders ##########################  if not env['verbose']:
733        env['CCCOMSTR'] = "Compiling $TARGET"
734        env['CXXCOMSTR'] = "Compiling $TARGET"
735        env['SHCCCOMSTR'] = "Compiling $TARGET"
736        env['SHCXXCOMSTR'] = "Compiling $TARGET"
737        env['ARCOMSTR'] = "Linking $TARGET"
738        env['LINKCOMSTR'] = "Linking $TARGET"
739        env['SHLINKCOMSTR'] = "Linking $TARGET"
740        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
741        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
742        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
743        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
744        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
745    
746    print("")
747    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
748    print("Escript/Finley revision %s"%global_revision)
749    print("  Install prefix:  %s"%env['prefix'])
750    print("          Python:  %s"%sysconfig.PREFIX)
751    print("           boost:  %s"%env['boost_prefix'])
752    print("           numpy:  YES")
753    if env['usempi']:
754        print("             MPI:  YES (flavour: %s)"%env['mpi'])
755    else:
756        print("             MPI:  DISABLED")
757    if env['uselapack']:
758        print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
759    else:
760        print("          LAPACK:  DISABLED")
761    d_list=[]
762    e_list=[]
763    for i in 'debug','openmp','boomeramg','mkl','netcdf','papi','parmetis','silo','sympy','umfpack','visit','vsl_random':
764        if env[i]: e_list.append(i)
765        else: d_list.append(i)
766    for i in e_list:
767        print("%16s:  YES"%i)
768    for i in d_list:
769        print("%16s:  DISABLED"%i)
770    if env['cppunit']:
771        print("         CppUnit:  FOUND")
772    else:
773        print("         CppUnit:  NOT FOUND")
774    if env['gmsh']=='m':
775        print("            gmsh:  FOUND, MPI-ENABLED")
776    elif env['gmsh']=='s':
777        print("            gmsh:  FOUND")
778    else:
779        print("            gmsh:  NOT FOUND")
780    if env['numpy_h']:
781        print("   numpy headers:  FOUND")
782    else:
783        print("   numpy headers:  NOT FOUND")
784    print("   vsl_random:  %s"%env['vsl_random'])
785        
786    if ((fatalwarning != '') and (env['werror'])):
787        print("  Treating warnings as errors")
788    else:
789        print("  NOT treating warnings as errors")
790    print("")
791    
792  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  ####################### Configure the subdirectories #########################
 env.Append(BUILDERS = {'PyCompile' : py_builder});  
793    
794  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  from grouptest import *
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
795    
796  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  TestGroups=[]
 env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
797    
798  ############ Build the subdirectories ##########################  # keep an environment without warnings-as-errors
799    dodgy_env=env.Clone()
800    
801  Export(["env", "env_mpi", "clone_env"])  # now add warnings-as-errors flags. This needs to be done after configuration
802    # because the scons test files have warnings in them
803    if ((fatalwarning != '') and (env['werror'])):
804        env.Append(CCFLAGS = fatalwarning)
805    
806  env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  Export(
807  env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)    ['env',
808  env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)     'dodgy_env',
809  env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)     'IS_WINDOWS',
810  env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)     'TestGroups'
811  env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)    ]
812  env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  )
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  
813    
814  ############ Remember what optimizations we used ###############  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
815    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
816    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
817    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
818    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
819    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
820    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
821    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
822    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
823    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
824    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
825    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
826    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
827    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
828    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
829    
830    
831    ######################## Populate the buildvars file #########################
832    
833    # remove obsolete file
834    if not env['usempi']:
835        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
836        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
837    
838    # Try to extract the boost version from version.hpp
839    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
840    boostversion='unknown'
841    try:
842        for line in boosthpp:
843            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
844            if ver:
845                boostversion=ver.group(1)
846    except StopIteration:
847        pass
848    boosthpp.close()
849    
850    
851    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
852    buildvars.write("svn_revision="+str(global_revision)+"\n")
853    buildvars.write("prefix="+prefix+"\n")
854    buildvars.write("cc="+env['CC']+"\n")
855    buildvars.write("cxx="+env['CXX']+"\n")
856    if env['pythoncmd']=='python':
857        buildvars.write("python="+sys.executable+"\n")
858        buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
859    else:
860        buildvars.write("python="+env['pythoncmd']+"\n")
861        p=Popen([env['pythoncmd'], '-c', 'from __future__ import print_function;import sys;print(str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2]))'], stdout=PIPE)
862        verstring=p.stdout.readline().strip()
863        p.wait()
864        buildvars.write("python_version="+verstring+"\n")
865    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
866    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
867    buildvars.write("boost_version="+boostversion+"\n")
868    buildvars.write("debug=%d\n"%int(env['debug']))
869    buildvars.write("openmp=%d\n"%int(env['openmp']))
870    buildvars.write("mpi=%s\n"%env['mpi'])
871    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
872    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
873    buildvars.write("lapack=%s\n"%env['lapack'])
874    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
875    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
876        buildvars.write("%s=%d\n"%(i, int(env[i])))
877        if env[i]:
878            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
879            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
880    buildvars.close()
881    
882  remember_list = []  ################### Targets to build and install libraries ###################
883    
884  if env['usedebug']:  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
885    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  env.Alias('target_init', [target_init])
886    # delete buildvars upon cleanup
887    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
888    
889  if env['usempi']:  # The headers have to be installed prior to build in order to satisfy
890    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  # #include <paso/Common.h>
891    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
892    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
893    
894  if env['omp_optim'] != '':  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
895    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
896    
897  env.Alias('remember_options', remember_list)  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
898    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
899    
900  ############ Targets to build and install libraries ############  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
901    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
902    
903  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
904  env.Alias('target_init', [target_init])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
905    
906  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
907  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
908    
909  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
910  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
911    
912  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
913  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
914    
915  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
916  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
917    
918  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
919  build_all_list = []  build_all_list = []
920  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
921  build_all_list += ['build_paso']  build_all_list += ['build_paso']
922  build_all_list += ['build_escript']  build_all_list += ['build_escript']
923    build_all_list += ['build_pasowrap']
924    build_all_list += ['build_dudley']
925  build_all_list += ['build_finley']  build_all_list += ['build_finley']
926  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_ripley']
927  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  build_all_list += ['build_weipa']
928    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
929    if env['usempi']:   build_all_list += ['build_pythonMPI']
930    build_all_list += ['build_escriptconvert']
931  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
932    
933  install_all_list = []  install_all_list = []
# Line 633  install_all_list += ['target_init'] Line 935  install_all_list += ['target_init']
935  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
936  install_all_list += ['install_paso']  install_all_list += ['install_paso']
937  install_all_list += ['install_escript']  install_all_list += ['install_escript']
938    install_all_list += ['install_pasowrap']
939    install_all_list += ['install_dudley']
940  install_all_list += ['install_finley']  install_all_list += ['install_finley']
941  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_ripley']
942  install_all_list += ['target_install_modellib_py']  install_all_list += ['install_weipa']
943  install_all_list += ['target_install_pycad_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
944  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_downunder_py']
945  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  install_all_list += ['install_modellib_py']
946  install_all_list += ['remember_options']  install_all_list += ['install_pycad_py']
947    if env['usempi']:   install_all_list += ['install_pythonMPI']
948    install_all_list += ['install_escriptconvert']
949  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
950    
951  # Default target is install  # Default target is install
952  env.Default('install_all')  env.Default('install_all')
953    
954  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
955    
956  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  if not env['cppunit']:
957        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
958        env.Alias('run_tests', test_msg)
959    env.Alias('run_tests', ['install_all'])
960    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
961    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
962    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
963    
964    ##################### Targets to build the documentation #####################
965    
966    env.Alias('api_epydoc','install_all')
967    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])
968    env.Alias('release_prep', ['docs', 'install_all'])
969    
970    
971    # The test scripts are always generated, this target allows us to
972    # generate the testscripts without doing a full build
973    env.Alias('testscripts',[])
974    
975    if not IS_WINDOWS:
976        try:
977            utest=open('utest.sh','w')
978            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix, False))
979            for tests in TestGroups:
980                utest.write(tests.makeString())
981            utest.close()
982            Execute(Chmod('utest.sh', 0o755))
983            print("Generated utest.sh.")
984            # This version contains only python tests - I want this to be usable
985            # From a binary only install if you have the test files
986            utest=open('itest.sh','w')
987            utest.write(GroupTest.makeHeader(env['PLATFORM'], prefix, True))
988            for tests in TestGroups:
989              if tests.exec_cmd=='$PYTHONRUNNER ':
990                utest.write(tests.makeString())
991            utest.close()
992            Execute(Chmod('itest.sh', 0o755))
993            print("Generated itest.sh.")        
994        except IOError:
995            print("Error attempting to write unittests file.")
996            Exit(1)
997    
998        # delete utest.sh upon cleanup
999        env.Clean('target_init', 'utest.sh')
1000        env.Clean('target_init', 'itest.sh')
1001    
1002        # Make sure that the escript wrapper is in place
1003        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
1004            print("Copying escript wrapper.")
1005            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
1006    

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