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revision 2101 by gross, Wed Nov 26 08:29:08 2008 UTC revision 3675 by jfenwick, Thu Nov 17 00:53:38 2011 UTC
# Line 1  Line 1 
   
1  ########################################################  ########################################################
2  #  #
3  # Copyright (c) 2003-2008 by University of Queensland  # Copyright (c) 2003-2010 by University of Queensland
4  # Earth Systems Science Computational Center (ESSCC)  # Earth Systems Science Computational Center (ESSCC)
5  # http://www.uq.edu.au/esscc  # http://www.uq.edu.au/esscc
6  #  #
# Line 11  Line 10 
10  #  #
11  ########################################################  ########################################################
12    
13    EnsureSConsVersion(0,98,1)
14    EnsurePythonVersion(2,5)
15    
16  EnsureSConsVersion(0,96,91)  import sys, os, platform, re
17  EnsurePythonVersion(2,3)  from distutils import sysconfig
18    from site_init import *
19  import sys, os, re, socket  
20    # Version number to check for in options file. Increment when new features are
21  # Add our extensions  # added or existing options changed.
22  if os.path.isdir('scons'): sys.path.append('scons')  REQUIRED_OPTS_VERSION=201
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
   
 # The string python2.4 or python2.5  
 python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  
23    
24  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
25  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS = (os.name == 'nt')
26    
27  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  ########################## Determine options file ############################
28    # 1. command line
29    # 2. scons/<hostname>_options.py
30    # 3. name as part of a cluster
31    options_file=ARGUMENTS.get('options_file', None)
32    if not options_file:
33        ext_dir = os.path.join(os.getcwd(), 'scons')
34        hostname = platform.node().split('.')[0]
35        for name in hostname, effectiveName(hostname):
36            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
37            options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
38            if os.path.isfile(options_file): break
39    
 # Read configuration options from file scons/<hostname>_options.py  
 hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
 tmp = os.path.join("scons",hostname+"_options.py")  
 options_file = ARGUMENTS.get('options_file', tmp)  
40  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
41    options_file = False      print("\nWARNING:\nOptions file %s" % options_file)
42    print "Options file not found (expected '%s')" % tmp      print("not found! Default options will be used which is most likely suboptimal.")
43  else:      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
44    print "Options file is", options_file      print("subdirectory and customize it to your needs.\n")
45        options_file = None
46  # Load options file and command-line arguments  
47  opts = Options(options_file, ARGUMENTS)  ############################### Build options ################################
48    
49  ############ Load build options ################################  default_prefix='/usr'
50    mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
51  opts.AddOptions(  lapack_flavours=('none', 'clapack', 'mkl')
52  # Where to install esys stuff  
53    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),  vars = Variables(options_file, ARGUMENTS)
54    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),  vars.AddVariables(
55    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
56    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
57    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
58  # Compilation options    BoolVariable('verbose', 'Output full compile/link lines', False),
59    BoolOption('dodebug', 'For backwards compatibility', 'no'),  # Compiler/Linker options
60    BoolOption('usedebug', 'Do you want a debug build?', 'no'),    ('cc', 'Path to C compiler', 'default'),
61    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
62    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
63    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
64    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
65    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),    ('cc_extra', 'Extra C compiler flags', ''),
66    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
   ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  
   ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  
   ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),  
   ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),  
   ('cc_extra', 'Extra C/C++ flags', ''),  
67    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
68    ('sys_libs', 'System libraries to link with', []),    BoolVariable('werror','Treat compiler warnings as errors', True),
69    ('ar_flags', 'Static library archiver flags to use', ''),    BoolVariable('debug', 'Compile with debug flags', False),
70    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
71    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),    ('omp_flags', 'OpenMP compiler flags', 'default'),
72    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
73  # Python  # Mandatory libraries
74    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
75    ('python_lib_path', 'Path to Python libs', usr_lib),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
76    ('python_libs', 'Python libraries to link with', [python_version]),  # Mandatory for tests
77    ('python_cmd', 'Python command', 'python'),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
78  # Boost    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
79    ('boost_path', 'Path to Boost includes', '/usr/include'),  # Optional libraries and options
80    ('boost_lib_path', 'Path to Boost libs', usr_lib),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
81    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
82  # NetCDF    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
83    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    BoolVariable('netcdf', 'Enable netCDF file support', False),
84    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
85    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
86    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
87  # MPI    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
88    BoolOption('useMPI', 'For backwards compatibility', 'no'),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
89    BoolOption('usempi', 'Compile parallel version using MPI', 'no'),    BoolVariable('papi', 'Enable PAPI', False),
90    ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   ('mpi_path', 'Path to MPI includes', '/usr/include'),  
   ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),  
   ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),  
 # ParMETIS  
   BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),  
   ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),  
   ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),  
   ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),  
 # PAPI  
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
91    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
92    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
93  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
94    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
95    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
96    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
97    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
98  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
99    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
100    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
101    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
102    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
103    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
104  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
105    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
106    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
107    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
108  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
109    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
110    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
111    ('blas_libs', 'BLAS libraries to link with', ['blas']),    BoolVariable('pyvisi', 'Enable pyvisi (deprecated, requires VTK module)', False),
112  # An option for specifying the compiler tools set (see windows branch).    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
113    ('tools_names', 'allow control over the tools in the env setup', ['intelc']),  # Advanced settings
114  # finer control over library building, intel aggressive global optimisation    #dudley_assemble_flags = -funroll-loops      to actually do something
115  # works with dynamic libraries on windows.    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
116    ('share_esysUtils', 'control static or dynamic esysUtils lib', False),    # To enable passing function pointers through python
117    ('share_paso', 'control static or dynamic paso lib', False)    BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
118      # An option for specifying the compiler tools (see windows branch)
119      ('tools_names', 'Compiler tools to use', ['default']),
120      ('env_export', 'Environment variables to be passed to tools',[]),
121      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
122      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
123      # finer control over library building, intel aggressive global optimisation
124      # works with dynamic libraries on windows.
125      ('build_shared', 'Build dynamic libraries only', False),
126      ('sys_libs', 'Extra libraries to link with', []),
127      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
128      ('SVN_VERSION', 'Do not use from options file', -2),
129  )  )
130    
131  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
   
 # intelc uses regular expressions improperly and emits a warning about  
 # failing to find the compilers.  This warning can be safely ignored.  
132    
133  if IS_WINDOWS_PLATFORM:  # Intel's compiler uses regular expressions improperly and emits a warning
134        env = Environment(options = opts)  # about failing to find the compilers. This warning can be safely ignored.
       env = Environment(tools = ['default'] + env['tools_names'],  
                         options = opts)  
 else:  
    if socket.gethostname().split('.')[0] == 'service0':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 ############ Fill in compiler options if not set above #########  
   
 # Backwards compatibility: allow dodebug=yes and useMPI=yes  
 if env['dodebug']: env['usedebug'] = 1  
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
   fatalwarning      = ""        # Switch to turn warnings into errors  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-pedantic -Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER -isystem " + env['boost_path'] + "/boost -isystem " + env['python_path'] + " -Wno-sign-compare -Wno-system-headers -Wno-strict-aliasing -Wno-long-long"  
 #the strict aliasing warning is triggered by some type punning in the boost headers for version 1.34  
 #isystem does not seem to prevent this  
 #the long long warning occurs on the Mac  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = "-pedantic-errors -Wno-long-long"  
   fatalwarning      = "-Werror"  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   fatalwarning      = ""  
 elif env["CC"] == "icl":  
   # intel C on Windows, see windows_intelc_options.py for a start  
   pedantic      = ""  
   fatalwarning      = ""  
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
135    
136  try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  # PATH is needed so the compiler, linker and tools are found if they are not
137  except KeyError: pass  # in default locations.
138    env = Environment(tools = ['default'], options = vars,
139  try: env['ENV']['HOME'] = os.environ['HOME']                    ENV = {'PATH': os.environ['PATH']})
140  except KeyError: pass  if env['tools_names'] != 'default':
141        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
142                          ENV = {'PATH' : os.environ['PATH']})
143    
144    if options_file:
145        opts_valid=False
146        if 'escript_opts_version' in env.Dictionary() and \
147            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
148                opts_valid=True
149        if opts_valid:
150            print("Using options in %s." % options_file)
151        else:
152            print("\nOptions file %s" % options_file)
153            print("is outdated! Please update the file by examining one of the TEMPLATE")
154            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
155            Exit(1)
156    
157    # Generate help text (scons -h)
158    Help(vars.GenerateHelpText(env))
159    
160    # Check for superfluous options
161    if len(vars.UnknownVariables())>0:
162        for k in vars.UnknownVariables():
163            print("Unknown option '%s'" % k)
164        Exit(1)
165    
166    #################### Make sure install directories exist #####################
167    
168    env['BUILD_DIR']=env['build_dir']
169    prefix=Dir(env['prefix']).abspath
170    env['incinstall'] = os.path.join(prefix, 'include')
171    env['bininstall'] = os.path.join(prefix, 'bin')
172    env['libinstall'] = os.path.join(prefix, 'lib')
173    env['pyinstall']  = os.path.join(prefix, 'esys')
174    if not os.path.isdir(env['bininstall']):
175        os.makedirs(env['bininstall'])
176    if not os.path.isdir(env['libinstall']):
177        os.makedirs(env['libinstall'])
178    if not os.path.isdir(env['pyinstall']):
179        os.makedirs(env['pyinstall'])
180    
181    env.Append(CPPPATH = [env['incinstall']])
182    env.Append(LIBPATH = [env['libinstall']])
183    
184    ################# Fill in compiler options if not set above ##################
185    
186    if env['cc'] != 'default': env['CC']=env['cc']
187    if env['cxx'] != 'default': env['CXX']=env['cxx']
188    
189    # version >=9 of intel C++ compiler requires use of icpc to link in C++
190    # runtimes (icc does not)
191    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
192        env['LINK'] = env['CXX']
193    
194    # default compiler/linker options
195    cc_flags = ''
196    cc_optim = ''
197    cc_debug = ''
198    omp_flags = ''
199    omp_ldflags = ''
200    fatalwarning = '' # switch to turn warnings into errors
201    sysheaderopt = '' # how to indicate that a header is a system header
202    
203    # env['CC'] might be a full path
204    cc_name=os.path.basename(env['CC'])
205    
206    if cc_name == 'icc':
207        # Intel compiler
208        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
209        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
210        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
211        omp_flags   = "-openmp -openmp_report0"
212        omp_ldflags = "-openmp -openmp_report0 -lguide -lpthread"
213        fatalwarning = "-Werror"
214    elif cc_name[:3] == 'gcc':
215        # GNU C on any system
216        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
217        cc_optim     = "-O3"
218        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
219        omp_flags    = "-fopenmp"
220        omp_ldflags  = "-fopenmp"
221        fatalwarning = "-Werror"
222        sysheaderopt = "-isystem"
223    elif cc_name == 'cl':
224        # Microsoft Visual C on Windows
225        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
226        cc_optim     = "/O2 /Op /W3"
227        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
228        fatalwarning = "/WX"
229    elif cc_name == 'icl':
230        # Intel C on Windows
231        cc_flags     = '/EHsc /GR /MD'
232        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
233        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
234        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
235        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
236    
237    # set defaults if not otherwise specified
238    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
239    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
240    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
241    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
242    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
243    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
244    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
245    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
246    
247    # set up the autolazy values
248    if env['forcelazy'] == 'on':
249        env.Append(CPPDEFINES=['FAUTOLAZYON'])
250    elif env['forcelazy'] == 'off':
251        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
252    
253    # set up the collective resolve values
254    if env['forcecollres'] == 'on':
255        env.Append(CPPDEFINES=['FRESCOLLECTON'])
256    elif env['forcecollres'] == 'off':
257        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
258    
259    # allow non-standard C if requested
260    if env['iknowwhatimdoing']:
261        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
262    
263    # Disable OpenMP if no flags provided
264    if env['openmp'] and env['omp_flags'] == '':
265       print("OpenMP requested but no flags provided - disabling OpenMP!")
266       env['openmp'] = False
267    
268    if env['openmp']:
269        env.Append(CCFLAGS = env['omp_flags'])
270        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
271    else:
272        env['omp_flags']=''
273        env['omp_ldflags']=''
274    
275  # Configure for test suite  # add debug/non-debug compiler flags
276  env.PrependENVPath('PYTHONPATH', prefix)  if env['debug']:
277  env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])      env.Append(CCFLAGS = env['cc_debug'])
278    else:
279        env.Append(CCFLAGS = env['cc_optim'])
280    
281  env['ENV']['ESCRIPT_ROOT'] = prefix  # always add cc_flags
282    env.Append(CCFLAGS = env['cc_flags'])
283    
284  ############ Set up paths for Configure() ######################  # add system libraries
285    env.AppendUnique(LIBS = env['sys_libs'])
286    
 # Make a copy of an environment  
 # Use env.Clone if available, but fall back on env.Copy for older version of scons  
 def clone_env(env):  
   if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
   else:                   return env.Copy() # scons-0.96  
287    
288  # Add cc option -I<Escript>/trunk/include  global_revision=ARGUMENTS.get('SVN_VERSION', None)
289  env.Append(CPPPATH      = [Dir('include')])  if global_revision:
290        global_revision = re.sub(':.*', '', global_revision)
291        global_revision = re.sub('[^0-9]', '', global_revision)
292        if global_revision == '': global_revision='-2'
293    else:
294      # Get the global Subversion revision number for the getVersion() method
295      try:
296        global_revision = os.popen('svnversion -n .').read()
297        global_revision = re.sub(':.*', '', global_revision)
298        global_revision = re.sub('[^0-9]', '', global_revision)
299        if global_revision == '': global_revision='-2'
300      except:
301        global_revision = '-1'
302    env['svn_revision']=global_revision
303    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
304    
305    if IS_WINDOWS:
306        if not env['build_shared']:
307            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
308            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
309    
310    ###################### Copy required environment vars ########################
311    
312    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
313    if IS_WINDOWS:
314        LD_LIBRARY_PATH_KEY='PATH'
315        env['ENV']['LD_LIBRARY_PATH']=''
316    else:
317        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
318    
319  # Add cc option -L<Escript>/trunk/lib  # the following env variables are exported for the unit tests
 env.Append(LIBPATH      = [Dir(env['libinstall'])])  
320    
321  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
322  if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])      try:
323            env['ENV'][key] = os.environ[key]
324        except KeyError:
325            env['ENV'][key] = 1
326    
327    env_export=env['env_export']
328    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
329    
330    for key in set(env_export):
331        try:
332            env['ENV'][key] = os.environ[key]
333        except KeyError:
334            pass
335    
336  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  try:
337        env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
338    except KeyError:
339        pass
340    
341    # these shouldn't be needed
342    #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
343    #    try:
344    #        env['ENV'][key] = os.environ[key]
345    #    except KeyError:
346    #        pass
347    
348  # MS Windows  try:
349  if IS_WINDOWS_PLATFORM:      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
350    env.PrependENVPath('PATH',    [env['boost_lib_path']])  except KeyError:
351    env.PrependENVPath('PATH',    [env['libinstall']])      pass
   if not env['share_esysUtils'] :  
     env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])  
   if not env['share_paso'] :  
     env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])  
352    
353    if env['usenetcdf']:  ######################## Add some custom builders ############################
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
354    
355  env.Append(ARFLAGS = env['ar_flags'])  py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
356    env.Append(BUILDERS = {'PyCompile' : py_builder});
357    
358  # Get the global Subversion revision number for getVersion() method  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
359  try:  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
    global_revision = os.popen("svnversion -n .").read()  
    global_revision = re.sub(":.*", "", global_revision)  
    global_revision = re.sub("[^0-9]", "", global_revision)  
 except:  
    global_revision="-1"  
 if global_revision == "": global_revision="-2"  
 env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  
360    
361  ############ numarray (required) ###############################  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
362    env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
363    
364  try:  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
365    from numarray import identity  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
 except ImportError:  
   print "Cannot import numarray, you need to set your PYTHONPATH"  
   sys.exit(1)  
366    
367  ############ C compiler (required) #############################  ############################ Dependency checks ###############################
368    
369  # Create a Configure() environment for checking existence of required libraries and headers  # Create a Configure() environment to check for compilers and python
370  conf = Configure(clone_env(env))  conf = Configure(env.Clone())
371    
372  # Test that the compiler is working  ######## Test that the compilers work
373  if not conf.CheckFunc('printf'):  
374    print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  if 'CheckCC' in dir(conf): # exists since scons 1.1.0
375    sys.exit(1)      if not conf.CheckCC():
376            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
377            Exit(1)
378        if not conf.CheckCXX():
379            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
380            Exit(1)
381    else:
382        if not conf.CheckFunc('printf', language='c'):
383            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
384            Exit(1)
385        if not conf.CheckFunc('printf', language='c++'):
386            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
387            Exit(1)
388    
389  if conf.CheckFunc('gethostname'):  if conf.CheckFunc('gethostname'):
390    conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
391    
392  ############ python libraries (required) #######################  ######## Python headers & library (required)
393    
394  conf.env.AppendUnique(CPPPATH       = [env['python_path']])  python_inc_path=sysconfig.get_python_inc()
395  conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  if IS_WINDOWS:
396  conf.env.AppendUnique(LIBS      = [env['python_libs']])      python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
397    elif env['PLATFORM']=='darwin':
398        python_lib_path=sysconfig.get_config_var('LIBPL')
399    else:
400        python_lib_path=sysconfig.get_config_var('LIBDIR')
401    #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
402    if IS_WINDOWS:
403        python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
404    else:
405        python_libs=['python'+sysconfig.get_python_version()]
406    
407    if sysheaderopt == '':
408        conf.env.AppendUnique(CPPPATH = [python_inc_path])
409    else:
410        conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
411    
412  conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs  conf.env.AppendUnique(LIBPATH = [python_lib_path])
413    conf.env.AppendUnique(LIBS = python_libs)
414    # The wrapper script needs to find the libs
415    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
416    
417  if not conf.CheckCHeader('Python.h'):  if not conf.CheckCHeader('Python.h'):
418    print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])      print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
419    sys.exit(1)      Exit(1)
420  if not conf.CheckFunc('Py_Main'):  if not conf.CheckFunc('Py_Exit'):
421    print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])      print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
422    sys.exit(1)      Exit(1)
   
 ############ boost (required) ##################################  
   
 conf.env.AppendUnique(CPPPATH       = [env['boost_path']])  
 conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['boost_libs']])  
   
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  
   
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('PyObject_SetAttr'):  
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
423    
424  # Commit changes to environment  # Commit changes to environment
425  env = conf.Finish()  env = conf.Finish()
426    
427  ############ VTK (optional) ####################################  ######## boost (required)
   
 if env['usevtk']:  
   try:  
     import vtk  
     env['usevtk'] = 1  
   except ImportError:  
     env['usevtk'] = 0  
   
 # Add VTK to environment env if it was found  
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
   
 ############ NetCDF (optional) #################################  
   
 conf = Configure(clone_env(env))  
428    
429  if env['usenetcdf']:  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
430    conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  if sysheaderopt == '':
431    conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])      env.AppendUnique(CPPPATH = [boost_inc_path])
   conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs  
   
 if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
   
 # Add NetCDF to environment env if it was found  
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
432  else:  else:
433    conf.Finish()      # This is required because we can't -isystem /usr/include since it breaks
434        # std includes
435  ############ PAPI (optional) ###################################      if os.path.normpath(boost_inc_path) == '/usr/include':
436            conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
437        else:
438            env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
439    
440    env.AppendUnique(LIBPATH = [boost_lib_path])
441    env.AppendUnique(LIBS = env['boost_libs'])
442    env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
443    
444  # Start a new configure environment that reflects what we've already found  ######## numpy (required)
 conf = Configure(clone_env(env))  
445    
446  if env['usepapi']:  try:
447    conf.env.AppendUnique(CPPPATH = [env['papi_path']])      from numpy import identity
448    conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  except ImportError:
449    conf.env.AppendUnique(LIBS    = [env['papi_libs']])      print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
450    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs      Exit(1)
451    
452  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  ######## CppUnit (required for tests)
 if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  
453    
454  # Add PAPI to environment env if it was found  try:
455  if env['usepapi']:      cppunit_inc_path,cppunit_lib_path=findLibWithHeader(env, env['cppunit_libs'], 'cppunit/TestFixture.h', env['cppunit_prefix'], lang='c++')
456    env = conf.Finish()      env.AppendUnique(CPPPATH = [cppunit_inc_path])
457    env.Append(CPPDEFINES = ['BLOCKPAPI'])      env.AppendUnique(LIBPATH = [cppunit_lib_path])
458  else:      env.PrependENVPath(LD_LIBRARY_PATH_KEY, cppunit_lib_path)
459    conf.Finish()      env['cppunit']=True
460    except:
461  ############ MKL (optional) ####################################      env['cppunit']=False
462    
463  # Start a new configure environment that reflects what we've already found  ######## VTK (optional)
 conf = Configure(clone_env(env))  
464    
465  if env['usemkl']:  if env['pyvisi']:
466    conf.env.AppendUnique(CPPPATH = [env['mkl_path']])      try:
467    conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])          import vtk
468    conf.env.AppendUnique(LIBS    = [env['mkl_libs']])          env['pyvisi'] = True
469    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs      except ImportError:
470            print("Cannot import vtk, disabling pyvisi.")
471            env['pyvisi'] = False
472    
473    ######## netCDF (optional)
474    
475    netcdf_inc_path=''
476    netcdf_lib_path=''
477    if env['netcdf']:
478        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
479        env.AppendUnique(CPPPATH = [netcdf_inc_path])
480        env.AppendUnique(LIBPATH = [netcdf_lib_path])
481        env.AppendUnique(LIBS = env['netcdf_libs'])
482        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
483        env.Append(CPPDEFINES = ['USE_NETCDF'])
484    
485    ######## PAPI (optional)
486    
487    papi_inc_path=''
488    papi_lib_path=''
489    if env['papi']:
490        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
491        env.AppendUnique(CPPPATH = [papi_inc_path])
492        env.AppendUnique(LIBPATH = [papi_lib_path])
493        env.AppendUnique(LIBS = env['papi_libs'])
494        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
495        env.Append(CPPDEFINES = ['BLOCKPAPI'])
496    
497    ######## MKL (optional)
498    
499    mkl_inc_path=''
500    mkl_lib_path=''
501    if env['mkl']:
502        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
503        env.AppendUnique(CPPPATH = [mkl_inc_path])
504        env.AppendUnique(LIBPATH = [mkl_lib_path])
505        env.AppendUnique(LIBS = env['mkl_libs'])
506        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
507        env.Append(CPPDEFINES = ['MKL'])
508    
509    ######## UMFPACK (optional)
510    
511    umfpack_inc_path=''
512    umfpack_lib_path=''
513    if env['umfpack']:
514        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
515        env.AppendUnique(CPPPATH = [umfpack_inc_path])
516        env.AppendUnique(LIBPATH = [umfpack_lib_path])
517        env.AppendUnique(LIBS = env['umfpack_libs'])
518        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
519        env.Append(CPPDEFINES = ['UMFPACK'])
520    
521    ######## LAPACK (optional)
522    
523    if env['lapack']=='mkl' and not env['mkl']:
524        print("mkl_lapack requires MKL!")
525        Exit(1)
526    
527    env['uselapack'] = env['lapack']!='none'
528    lapack_inc_path=''
529    lapack_lib_path=''
530    if env['uselapack']:
531        header='clapack.h'
532        if env['lapack']=='mkl':
533            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
534            header='mkl_lapack.h'
535        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
536        env.AppendUnique(CPPPATH = [lapack_inc_path])
537        env.AppendUnique(LIBPATH = [lapack_lib_path])
538        env.AppendUnique(LIBS = env['lapack_libs'])
539        env.Append(CPPDEFINES = ['USE_LAPACK'])
540    
541    ######## Silo (optional)
542    
543    silo_inc_path=''
544    silo_lib_path=''
545    if env['silo']:
546        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
547        env.AppendUnique(CPPPATH = [silo_inc_path])
548        env.AppendUnique(LIBPATH = [silo_lib_path])
549        # Note that we do not add the libs since they are only needed for the
550        # weipa library and tools.
551        #env.AppendUnique(LIBS = [env['silo_libs']])
552    
553    ######## VSL random numbers (optional)
554    if env['vsl_random']:
555        env.Append(CPPDEFINES = ['MKLRANDOM'])
556    
557    ######## VisIt (optional)
558    
559    visit_inc_path=''
560    visit_lib_path=''
561    if env['visit']:
562        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
563        env.AppendUnique(CPPPATH = [visit_inc_path])
564        env.AppendUnique(LIBPATH = [visit_lib_path])
565    
566    ######## MPI (optional)
567    
568    if env['mpi']=='no':
569        env['mpi']='none'
570    
571    env['usempi'] = env['mpi']!='none'
572    mpi_inc_path=''
573    mpi_lib_path=''
574    if env['usempi']:
575        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
576        env.AppendUnique(CPPPATH = [mpi_inc_path])
577        env.AppendUnique(LIBPATH = [mpi_lib_path])
578        env.AppendUnique(LIBS = env['mpi_libs'])
579        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
580        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
581        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
582        # On the other hand MPT and OpenMPI don't define the latter so we have to
583        # do that here
584        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
585            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
586    
587    ######## BOOMERAMG (optional)
588    
589    if env['mpi'] == 'none': env['boomeramg'] = False
590    
591    boomeramg_inc_path=''
592    boomeramg_lib_path=''
593    if env['boomeramg']:
594        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
595        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
596        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
597        env.AppendUnique(LIBS = env['boomeramg_libs'])
598        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
599        env.Append(CPPDEFINES = ['BOOMERAMG'])
600    
601    ######## ParMETIS (optional)
602    
603    if not env['usempi']: env['parmetis'] = False
604    
605    parmetis_inc_path=''
606    parmetis_lib_path=''
607    if env['parmetis']:
608        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
609        env.AppendUnique(CPPPATH = [parmetis_inc_path])
610        env.AppendUnique(LIBPATH = [parmetis_lib_path])
611        env.AppendUnique(LIBS = env['parmetis_libs'])
612        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
613        env.Append(CPPDEFINES = ['USE_PARMETIS'])
614    
615  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  ######## gmsh (optional, for tests)
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
616    
617  # Add MKL to environment env if it was found  try:
618  if env['usemkl']:      import subprocess
619    env = conf.Finish()      p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
620    env.Append(CPPDEFINES = ['MKL'])      _,e=p.communicate()
621        if e.split().count("MPI"):
622            env['gmsh']='m'
623        else:
624            env['gmsh']='s'
625    except OSError:
626        env['gmsh']=False
627    
628    ######## PDFLaTeX (for documentation)
629    if 'PDF' in dir(env) and '.tex' in env.PDF.builder.src_suffixes(env):
630        env['pdflatex']=True
631  else:  else:
632    conf.Finish()      env['pdflatex']=False
633    
634  ############ UMFPACK (optional) ################################  ######################## Summarize our environment ###########################
635    
636  # Start a new configure environment that reflects what we've already found  # keep some of our install paths first in the list for the unit tests
637  conf = Configure(clone_env(env))  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
638    env.PrependENVPath('PYTHONPATH', prefix)
639  if env['useumfpack']:  env['ENV']['ESCRIPT_ROOT'] = prefix
   conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs  
   
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?  
640    
641  # Add UMFPACK to environment env if it was found  if not env['verbose']:
642  if env['useumfpack']:      env['CCCOMSTR'] = "Compiling $TARGET"
643    env = conf.Finish()      env['CXXCOMSTR'] = "Compiling $TARGET"
644    env.Append(CPPDEFINES = ['UMFPACK'])      env['SHCCCOMSTR'] = "Compiling $TARGET"
645        env['SHCXXCOMSTR'] = "Compiling $TARGET"
646        env['ARCOMSTR'] = "Linking $TARGET"
647        env['LINKCOMSTR'] = "Linking $TARGET"
648        env['SHLINKCOMSTR'] = "Linking $TARGET"
649        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
650        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
651        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
652        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
653        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
654    
655    print("")
656    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
657    print("Escript/Finley revision %s"%global_revision)
658    print("  Install prefix:  %s"%env['prefix'])
659    print("          Python:  %s"%sysconfig.PREFIX)
660    print("           boost:  %s"%env['boost_prefix'])
661    print("           numpy:  YES")
662    if env['usempi']:
663        print("             MPI:  YES (flavour: %s)"%env['mpi'])
664  else:  else:
665    conf.Finish()      print("             MPI:  DISABLED")
666    if env['uselapack']:
667  ############ Add the compiler flags ############################      print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
   
 # Enable debug by choosing either cc_debug or cc_optim  
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
668  else:  else:
669    env.Append(CCFLAGS        = env['cc_optim'])      print("          LAPACK:  DISABLED")
670    env.Append(CCFLAGS        = env['omp_optim'])  d_list=[]
671    e_list=[]
672  # Always use cc_flags  for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
673  env.Append(CCFLAGS      = env['cc_flags'])      if env[i]: e_list.append(i)
674  env.Append(LIBS         = [env['omp_libs']])      else: d_list.append(i)
675    for i in e_list:
676  ############ MPI (optional) ####################################      print("%16s:  YES"%i)
677    for i in d_list:
678  # Create a modified environment for MPI programs (identical to env if usempi=no)      print("%16s:  DISABLED"%i)
679  env_mpi = clone_env(env)  if env['cppunit']:
680        print("         CppUnit:  FOUND")
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if env_mpi['usempi']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs  
   
 if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
   
 # Add MPI to environment env_mpi if it was found  
 if env_mpi['usempi']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])  
681  else:  else:
682    conf.Finish()      print("         CppUnit:  NOT FOUND")
683    if env['gmsh']=='m':
684  env['usempi'] = env_mpi['usempi']      print("            gmsh:  FOUND, MPI-ENABLED")
685    elif env['gmsh']=='s':
686  ############ ParMETIS (optional) ###############################      print("            gmsh:  FOUND")
   
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env_mpi))  
   
 if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  
   
 if env_mpi['useparmetis']:  
   conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs  
   
 if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  
 if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  
   
 # Add ParMETIS to environment env_mpi if it was found  
 if env_mpi['useparmetis']:  
   env_mpi = conf.Finish()  
   env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])  
687  else:  else:
688    conf.Finish()      print("            gmsh:  NOT FOUND")
689    print("      vsl_random:  %s"%env['vsl_random'])
690  env['useparmetis'] = env_mpi['useparmetis']      
691    if ((fatalwarning != '') and (env['werror'])):
692  ############ Now we switch on Warnings as errors ###############      print("  Treating warnings as errors")
693    else:
694  #this needs to be done after configuration because the scons test files have warnings in them      print("  NOT treating warnings as errors")
695    print("")
 if ((fatalwarning != "") and (env['usewarnings'])):  
   env.Append(CCFLAGS        = fatalwarning)  
   env_mpi.Append(CCFLAGS        = fatalwarning)  
   
 ############ Summarize our environment #########################  
696    
697  print ""  ####################### Configure the subdirectories #########################
 print "Summary of configuration (see ./config.log for information)"  
 print " Using python libraries"  
 print " Using numarray"  
 print " Using boost"  
 if env['usenetcdf']: print "    Using NetCDF"  
 else: print "   Not using NetCDF"  
 if env['usevtk']: print "   Using VTK"  
 else: print "   Not using VTK"  
 if env['usemkl']: print "   Using MKL"  
 else: print "   Not using MKL"  
 if env['useumfpack']: print "   Using UMFPACK"  
 else: print "   Not using UMFPACK"  
 if env['useopenmp']: print "    Using OpenMP"  
 else: print "   Not using OpenMP"  
 if env['usempi']: print "   Using MPI"  
 else: print "   Not using MPI"  
 if env['useparmetis']: print "  Using ParMETIS"  
 else: print "   Not using ParMETIS (requires MPI)"  
 if env['usepapi']: print "  Using PAPI"  
 else: print "   Not using PAPI"  
 if env['usedebug']: print " Compiling for debug"  
 else: print "   Not compiling for debug"  
 print " Installing in", prefix  
 if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"  
 else: print "   Not treating warnings as errors"  
 print ""  
698    
699  ############ Delete option-dependent files #####################  from grouptest import *
700    
701  Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  TestGroups=[]
 Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  
 if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  
702    
703  ############ Add some custom builders ##########################  # keep an environment without warnings-as-errors
704    dodgy_env=env.Clone()
705    
706  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  # now add warnings-as-errors flags. This needs to be done after configuration
707  env.Append(BUILDERS = {'PyCompile' : py_builder});  # because the scons test files have warnings in them
708    if ((fatalwarning != '') and (env['werror'])):
709  runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)      env.Append(CCFLAGS = fatalwarning)
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
   
 runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  
 env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
   
 ############ Build the subdirectories ##########################  
710    
711  Export(  Export(
712    ["env",    ['env',
713     "env_mpi",     'dodgy_env',
714     "clone_env",     'IS_WINDOWS',
715     "IS_WINDOWS_PLATFORM"     'TestGroups'
716     ]    ]
717    )  )
   
 env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  
718    
719  ############ Remember what optimizations we used ###############  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
720    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
721    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
722    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
723    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
724    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
725    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
726    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
727    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
728    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
729    env.SConscript(dirs = ['pyvisi/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pyvisi', duplicate=0)
730    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
731    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
732    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
733    
734    ######################## Populate the buildvars file #########################
735    
736    # remove obsolete file
737    if not env['usempi']:
738        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
739        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
740    
741    # Try to extract the boost version from version.hpp
742    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
743    boostversion='unknown'
744    try:
745        for line in boosthpp:
746            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
747            if ver:
748                boostversion=ver.group(1)
749    except StopIteration:
750        pass
751    boosthpp.close()
752    
753    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
754    buildvars.write("svn_revision="+str(global_revision)+"\n")
755    buildvars.write("prefix="+prefix+"\n")
756    buildvars.write("cc="+env['CC']+"\n")
757    buildvars.write("cxx="+env['CXX']+"\n")
758    buildvars.write("python="+sys.executable+"\n")
759    buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
760    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
761    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
762    buildvars.write("boost_version="+boostversion+"\n")
763    buildvars.write("debug=%d\n"%int(env['debug']))
764    buildvars.write("openmp=%d\n"%int(env['openmp']))
765    buildvars.write("mpi=%s\n"%env['mpi'])
766    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
767    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
768    buildvars.write("lapack=%s\n"%env['lapack'])
769    buildvars.write("pyvisi=%d\n"%env['pyvisi'])
770    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
771    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
772        buildvars.write("%s=%d\n"%(i, int(env[i])))
773        if env[i]:
774            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
775            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
776    buildvars.close()
777    
778  remember_list = []  ################### Targets to build and install libraries ###################
779    
780  if env['usedebug']:  target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
781    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  env.Alias('target_init', [target_init])
782    # delete buildvars upon cleanup
783    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
784    
785  if env['usempi']:  # The headers have to be installed prior to build in order to satisfy
786    remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  # #include <paso/Common.h>
787    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
788    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
789    
790  if env['omp_optim'] != '':  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
791    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
792    
793  env.Alias('remember_options', remember_list)  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
794    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
795    
796  ############ Targets to build and install libraries ############  env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
797    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
798    
 target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  
 env.Alias('target_init', [target_init])  
799    
800  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
801  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
802    
803  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
804  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
805    
806  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
807  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
808    
809  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
810  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
811    
812  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
813  build_all_list = []  build_all_list = []
814  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
815  build_all_list += ['build_paso']  build_all_list += ['build_paso']
816  build_all_list += ['build_escript']  build_all_list += ['build_escript']
817    build_all_list += ['build_pasowrap']
818    build_all_list += ['build_dudley']
819  build_all_list += ['build_finley']  build_all_list += ['build_finley']
820  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_weipa']
821  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  if not IS_WINDOWS: build_all_list += ['build_escriptreader']
822    if env['usempi']:   build_all_list += ['build_pythonMPI']
823    build_all_list += ['build_escriptconvert']
824  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
825    
826  install_all_list = []  install_all_list = []
# Line 650  install_all_list += ['target_init'] Line 828  install_all_list += ['target_init']
828  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
829  install_all_list += ['install_paso']  install_all_list += ['install_paso']
830  install_all_list += ['install_escript']  install_all_list += ['install_escript']
831    install_all_list += ['install_pasowrap']
832    install_all_list += ['install_dudley']
833  install_all_list += ['install_finley']  install_all_list += ['install_finley']
834  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_weipa']
835  install_all_list += ['target_install_modellib_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
836  install_all_list += ['target_install_pycad_py']  install_all_list += ['install_pyvisi_py']
837  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_modellib_py']
838  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  install_all_list += ['install_pycad_py']
839  install_all_list += ['remember_options']  if env['usempi']:   install_all_list += ['install_pythonMPI']
840    install_all_list += ['install_escriptconvert']
841  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
842    
843  # Default target is install  # Default target is install
844  env.Default('install_all')  env.Default('install_all')
845    
846  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
847    
848  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  test_msg = env.Command('.dummy.', None, '@echo "Cannot run C/C++ unit tests, CppUnit not found!";exit 1')
849    if not env['cppunit']:
850        env.Alias('run_tests', test_msg)
851    env.Alias('run_tests', ['install_all'])
852    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
853    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
854    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
855    
856    ##################### Targets to build the documentation #####################
857    
858    env.Alias('api_epydoc','install_all')
859    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
860    env.Alias('release_prep', ['docs', 'install_all'])
861    
862    if not IS_WINDOWS:
863        try:
864            utest=open('utest.sh','w')
865            utest.write(GroupTest.makeHeader(env['PLATFORM']))
866            for tests in TestGroups:
867                utest.write(tests.makeString())
868            utest.close()
869            Execute(Chmod('utest.sh', 0755))
870            print("Generated utest.sh.")
871        except IOError:
872            print("Error attempting to write unittests file.")
873            Exit(1)
874    
875        # delete utest.sh upon cleanup
876        env.Clean('target_init', 'utest.sh')
877    
878        # Make sure that the escript wrapper is in place
879        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
880            print("Copying escript wrapper.")
881            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
882    

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