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revision 2132 by jfenwick, Fri Dec 5 00:18:06 2008 UTC revision 3585 by caltinay, Wed Sep 7 06:16:08 2011 UTC
# Line 1  Line 1 
   
1  ########################################################  ########################################################
2  #  #
3  # Copyright (c) 2003-2008 by University of Queensland  # Copyright (c) 2003-2010 by University of Queensland
4  # Earth Systems Science Computational Center (ESSCC)  # Earth Systems Science Computational Center (ESSCC)
5  # http://www.uq.edu.au/esscc  # http://www.uq.edu.au/esscc
6  #  #
# Line 11  Line 10 
10  #  #
11  ########################################################  ########################################################
12    
13    EnsureSConsVersion(0,98,1)
14    EnsurePythonVersion(2,5)
15    
16  EnsureSConsVersion(0,96,91)  import sys, os, platform, re
17  EnsurePythonVersion(2,3)  from distutils import sysconfig
18    from site_init import *
19  import sys, os, re, socket  
20    # Version number to check for in options file. Increment when new features are
21  # Add our extensions  # added or existing options changed.
22  if os.path.isdir('scons'): sys.path.append('scons')  REQUIRED_OPTS_VERSION=200
 import scons_extensions  
   
 # Use /usr/lib64 if available, else /usr/lib  
 usr_lib = '/usr/lib'  
 if os.path.isfile('/usr/lib64/libc.so'): usr_lib = '/usr/lib64'  
   
 # The string python2.4 or python2.5  
 python_version = 'python%s.%s' % (sys.version_info[0], sys.version_info[1])  
23    
24  # MS Windows support, many thanks to PH  # MS Windows support, many thanks to PH
25  IS_WINDOWS_PLATFORM = (os.name== "nt")  IS_WINDOWS = (os.name == 'nt')
26    
27  prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  ########################## Determine options file ############################
28    # 1. command line
29    # 2. scons/<hostname>_options.py
30    # 3. name as part of a cluster
31    options_file=ARGUMENTS.get('options_file', None)
32    if not options_file:
33        ext_dir = os.path.join(os.getcwd(), 'scons')
34        hostname = platform.node().split('.')[0]
35        for name in hostname, effectiveName(hostname):
36            mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
37            options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
38            if os.path.isfile(options_file): break
39    
 # Read configuration options from file scons/<hostname>_options.py  
 hostname = re.sub("[^0-9a-zA-Z]", "_", socket.gethostname().split('.')[0])  
 tmp = os.path.join("scons",hostname+"_options.py")  
 options_file = ARGUMENTS.get('options_file', tmp)  
40  if not os.path.isfile(options_file):  if not os.path.isfile(options_file):
41    options_file = False      print("\nWARNING:\nOptions file %s" % options_file)
42    print "Options file not found (expected '%s')" % tmp      print("not found! Default options will be used which is most likely suboptimal.")
43  else:      print("It is recommended that you copy one of the TEMPLATE files in the scons/")
44    print "Options file is", options_file      print("subdirectory and customize it to your needs.\n")
45        options_file = None
46  # Load options file and command-line arguments  
47  opts = Options(options_file, ARGUMENTS)  ############################### Build options ################################
48    
49  ############ Load build options ################################  default_prefix='/usr'
50    mpi_flavours=('none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
51  opts.AddOptions(  lapack_flavours=('none', 'clapack', 'mkl')
52  # Where to install esys stuff  
53    ('prefix', 'where everything will be installed',                       Dir('#.').abspath),  vars = Variables(options_file, ARGUMENTS)
54    ('incinstall', 'where the esys headers will be installed',             os.path.join(Dir('#.').abspath,'include')),  vars.AddVariables(
55    ('bininstall', 'where the esys binaries will be installed',            os.path.join(prefix,'bin')),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
56    ('libinstall', 'where the esys libraries will be installed',           os.path.join(prefix,'lib')),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
57    ('pyinstall', 'where the esys python modules will be installed',       os.path.join(prefix,'esys')),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
58  # Compilation options    BoolVariable('verbose', 'Output full compile/link lines', False),
59    BoolOption('dodebug', 'For backwards compatibility', 'no'),  # Compiler/Linker options
60    BoolOption('usedebug', 'Do you want a debug build?', 'no'),    ('cc', 'Path to C compiler', 'default'),
61    BoolOption('usevtk', 'Do you want to use VTK?', 'yes'),    ('cxx', 'Path to C++ compiler', 'default'),
62    ('options_file', 'File of paths/options. Default: scons/<hostname>_options.py', options_file),    ('cc_flags', 'Base C/C++ compiler flags', 'default'),
63    ('win_cc_name', 'windows C compiler name if needed', 'msvc'),    ('cc_optim', 'Additional C/C++ flags for a non-debug build', 'default'),
64    # The strings -DDEFAULT_ get replaced by scons/<hostname>_options.py or by defaults below    ('cc_debug', 'Additional C/C++ flags for a debug build', 'default'),
65    ('cc_flags', 'C compiler flags to use', '-DEFAULT_1'),    ('cc_extra', 'Extra C compiler flags', ''),
66    ('cc_optim', 'C compiler optimization flags to use', '-DEFAULT_2'),    ('cxx_extra', 'Extra C++ compiler flags', ''),
   ('cc_debug', 'C compiler debug flags to use', '-DEFAULT_3'),  
   ('omp_optim', 'OpenMP compiler flags to use (Release build)', '-DEFAULT_4'),  
   ('omp_debug', 'OpenMP compiler flags to use (Debug build)', '-DEFAULT_5'),  
   ('omp_libs', 'OpenMP compiler libraries to link with', '-DEFAULT_6'),  
   ('cc_extra', 'Extra C/C++ flags', ''),  
67    ('ld_extra', 'Extra linker flags', ''),    ('ld_extra', 'Extra linker flags', ''),
68    ('sys_libs', 'System libraries to link with', []),    BoolVariable('werror','Treat compiler warnings as errors', True),
69    ('ar_flags', 'Static library archiver flags to use', ''),    BoolVariable('debug', 'Compile with debug flags', False),
70    BoolOption('useopenmp', 'Compile parallel version using OpenMP', 'yes'),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
71    BoolOption('usepedantic', 'Compile with -pedantic if using gcc', 'no'),    ('omp_flags', 'OpenMP compiler flags', 'default'),
72    BoolOption('usewarnings','Compile with warnings as errors if using gcc','yes'),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
73  # Python  # Mandatory libraries
74    ('python_path', 'Path to Python includes', '/usr/include/'+python_version),    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
75    ('python_lib_path', 'Path to Python libs', usr_lib),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
76    ('python_libs', 'Python libraries to link with', [python_version]),  # Optional libraries and options
77    ('python_cmd', 'Python command', 'python'),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
78  # Boost    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
79    ('boost_path', 'Path to Boost includes', '/usr/include'),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
80    ('boost_lib_path', 'Path to Boost libs', usr_lib),    BoolVariable('netcdf', 'Enable netCDF file support', False),
81    ('boost_libs', 'Boost libraries to link with', ['boost_python']),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
82  # NetCDF    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
83    BoolOption('usenetcdf', 'switch on/off the usage of netCDF', 'yes'),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
84    ('netCDF_path', 'Path to netCDF includes', '/usr/include'),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
85    ('netCDF_lib_path', 'Path to netCDF libs', usr_lib),    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
86    ('netCDF_libs', 'netCDF C++ libraries to link with', ['netcdf_c++', 'netcdf']),    BoolVariable('papi', 'Enable PAPI', False),
87  # MPI    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
   BoolOption('useMPI', 'For backwards compatibility', 'no'),  
   BoolOption('usempi', 'Compile parallel version using MPI', 'no'),  
   ('MPICH_IGNORE_CXX_SEEK', 'name of macro to ignore MPI settings of C++ SEEK macro (for MPICH)' , 'MPICH_IGNORE_CXX_SEEK'),  
   ('mpi_path', 'Path to MPI includes', '/usr/include'),  
   ('mpi_run', 'mpirun name' , 'mpiexec -np 1'),  
   ('mpi_lib_path', 'Path to MPI libs (needs to be added to the LD_LIBRARY_PATH)', usr_lib),  
   ('mpi_libs', 'MPI libraries to link with (needs to be shared!)', ['mpich' , 'pthread', 'rt']),  
 # ParMETIS  
   BoolOption('useparmetis', 'Compile parallel version using ParMETIS', 'yes'),  
   ('parmetis_path', 'Path to ParMETIS includes', '/usr/include'),  
   ('parmetis_lib_path', 'Path to ParMETIS library', usr_lib),  
   ('parmetis_libs', 'ParMETIS library to link with', ['parmetis', 'metis']),  
 # PAPI  
   BoolOption('usepapi', 'switch on/off the usage of PAPI', 'no'),  
   ('papi_path', 'Path to PAPI includes', '/usr/include'),  
   ('papi_lib_path', 'Path to PAPI libs', usr_lib),  
88    ('papi_libs', 'PAPI libraries to link with', ['papi']),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
89    BoolOption('papi_instrument_solver', 'use PAPI in Solver.c to instrument each iteration of the solver', False),    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
90  # MKL    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
91    BoolOption('usemkl', 'switch on/off the usage of MKL', 'no'),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
92    ('mkl_path', 'Path to MKL includes', '/sw/sdev/cmkl/10.0.2.18/include'),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
93    ('mkl_lib_path', 'Path to MKL libs', '/sw/sdev/cmkl/10.0.2.18/lib/em64t'),    BoolVariable('umfpack', 'Enable UMFPACK', False),
94    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver', 'mkl_em64t', 'guide', 'pthread']),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
95  # UMFPACK    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
96    BoolOption('useumfpack', 'switch on/off the usage of UMFPACK', 'no'),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
97    ('ufc_path', 'Path to UFconfig includes', '/usr/include/suitesparse'),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
98    ('umf_path', 'Path to UMFPACK includes', '/usr/include/suitesparse'),    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
99    ('umf_lib_path', 'Path to UMFPACK libs', usr_lib),    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
100    ('umf_libs', 'UMFPACK libraries to link with', ['umfpack']),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
101  # AMD (used by UMFPACK)    ('lapack_libs', 'LAPACK libraries to link with', []),
102    ('amd_path', 'Path to AMD includes', '/usr/include/suitesparse'),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
103    ('amd_lib_path', 'Path to AMD libs', usr_lib),    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
104    ('amd_libs', 'AMD libraries to link with', ['amd']),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
105  # BLAS (used by UMFPACK)    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
106    ('blas_path', 'Path to BLAS includes', '/usr/include/suitesparse'),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
107    ('blas_lib_path', 'Path to BLAS libs', usr_lib),    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
108    ('blas_libs', 'BLAS libraries to link with', ['blas']),    BoolVariable('pyvisi', 'Enable pyvisi (deprecated, requires VTK module)', False),
109  # An option for specifying the compiler tools set (see windows branch).    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
110    ('tools_names', 'allow control over the tools in the env setup', ['intelc']),  # Advanced settings
111  # finer control over library building, intel aggressive global optimisation    #dudley_assemble_flags = -funroll-loops      to actually do something
112  # works with dynamic libraries on windows.    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
113    ('share_esysUtils', 'control static or dynamic esysUtils lib', False),    # To enable passing function pointers through python
114    ('share_paso', 'control static or dynamic paso lib', False)    BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
115      # An option for specifying the compiler tools (see windows branch)
116      ('tools_names', 'Compiler tools to use', ['default']),
117      ('env_export', 'Environment variables to be passed to tools',[]),
118      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
119      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
120      # finer control over library building, intel aggressive global optimisation
121      # works with dynamic libraries on windows.
122      ('share_esysutils', 'Build a dynamic esysUtils library', False),
123      ('share_paso', 'Build a dynamic paso library', False),
124      ('sys_libs', 'Extra libraries to link with', []),
125      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
126  )  )
127    
128  ############ Specify which compilers to use ####################  ##################### Create environment and help text #######################
   
 # intelc uses regular expressions improperly and emits a warning about  
 # failing to find the compilers.  This warning can be safely ignored.  
   
 if IS_WINDOWS_PLATFORM:  
       env = Environment(options = opts)  
       env = Environment(tools = ['default'] + env['tools_names'],  
                         options = opts)  
 else:  
    if socket.gethostname().split('.')[0] == 'service0':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
    elif os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not)  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
   
 ############ Fill in compiler options if not set above #########  
   
 # Backwards compatibility: allow dodebug=yes and useMPI=yes  
 if env['dodebug']: env['usedebug'] = 1  
 if env['useMPI']: env['usempi'] = 1  
   
 # Default compiler options (override allowed in hostname_options.py, but should not be necessary)  
 # For both C and C++ you get: cc_flags and either the optim flags or debug flags  
   
 sysheaderopt = ""       # how do we indicate that a header is a system header. Use "" for no action.  
   
 if env["CC"] == "icc":  
   # Intel compilers  
   cc_flags      = "-fPIC -ansi -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"  
   cc_optim      = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = "-openmp -openmp_report0"  
   omp_debug     = "-openmp -openmp_report0"  
   omp_libs      = ['guide', 'pthread']  
   pedantic      = ""  
   fatalwarning      = ""        # Switch to turn warnings into errors  
   sysheaderopt      = ""  
 elif env["CC"] == "gcc":  
   # GNU C on any system  
   cc_flags      = "-pedantic -Wall -fPIC -ansi -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing"  
 #The strict aliasing error occurs for some versions of boost  
 #the long long warning occurs on the Mac  
   cc_optim      = "-O3"  
   cc_debug      = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = "-pedantic-errors -Wno-long-long"  
   fatalwarning      = "-Werror"  
   sysheaderopt      = "-isystem "  
 elif env["CC"] == "cl":  
   # Microsoft Visual C on Windows  
   cc_flags      = "/FD /EHsc /GR /wd4068 -D_USE_MATH_DEFINES -DDLL_NETCDF"  
   cc_optim      = "/O2 /Op /MT /W3"  
   cc_debug      = "/Od /RTC1 /MTd /ZI -DBOUNDS_CHECK"  
   omp_optim     = ""  
   omp_debug     = ""  
   omp_libs      = []  
   pedantic      = ""  
   fatalwarning      = ""  
   sysheaderopt      = ""  
 elif env["CC"] == "icl":  
   # intel C on Windows, see windows_intelc_options.py for a start  
   pedantic      = ""  
   fatalwarning      = ""  
   sysheaderopt      = ""  
   
   
 # If not specified in hostname_options.py then set them here  
 if env["cc_flags"]  == "-DEFAULT_1": env['cc_flags'] = cc_flags  
 if env["cc_optim"]  == "-DEFAULT_2": env['cc_optim'] = cc_optim  
 if env["cc_debug"]  == "-DEFAULT_3": env['cc_debug'] = cc_debug  
 if env["omp_optim"] == "-DEFAULT_4": env['omp_optim'] = omp_optim  
 if env["omp_debug"] == "-DEFAULT_5": env['omp_debug'] = omp_debug  
 if env["omp_libs"]  == "-DEFAULT_6": env['omp_libs'] = omp_libs  
   
 # OpenMP is disabled if useopenmp=no or both variables omp_optim and omp_debug are empty  
 if not env["useopenmp"]:  
   env['omp_optim'] = ""  
   env['omp_debug'] = ""  
   env['omp_libs'] = []  
   
 if env['omp_optim'] == "" and env['omp_debug'] == "": env["useopenmp"] = 0  
   
 ############ Copy environment variables into scons env #########  
   
 try: env['ENV']['OMP_NUM_THREADS'] = os.environ['OMP_NUM_THREADS']  
 except KeyError: env['ENV']['OMP_NUM_THREADS'] = 1  
   
 try: env['ENV']['PATH'] = os.environ['PATH']  
 except KeyError: pass  
   
 try: env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']  
 except KeyError: pass  
   
 try: env['ENV']['C_INCLUDE_PATH'] = os.environ['C_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['CPLUS_INCLUDE_PATH'] = os.environ['CPLUS_INCLUDE_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LD_LIBRARY_PATH'] = os.environ['LD_LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['LIBRARY_PATH'] = os.environ['LIBRARY_PATH']  
 except KeyError: pass  
   
 try: env['ENV']['DISPLAY'] = os.environ['DISPLAY']  
 except KeyError: pass  
   
 try: env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
 except KeyError: pass  
   
 try: env['ENV']['HOME'] = os.environ['HOME']  
 except KeyError: pass  
129    
130  # Configure for test suite  # Intel's compiler uses regular expressions improperly and emits a warning
131  env.PrependENVPath('PYTHONPATH', prefix)  # about failing to find the compilers. This warning can be safely ignored.
 env.PrependENVPath('LD_LIBRARY_PATH', env['libinstall'])  
   
 env['ENV']['ESCRIPT_ROOT'] = prefix  
   
 ############ Set up paths for Configure() ######################  
   
 # Make a copy of an environment  
 # Use env.Clone if available, but fall back on env.Copy for older version of scons  
 def clone_env(env):  
   if 'Clone' in dir(env): return env.Clone()    # scons-0.98  
   else:                   return env.Copy() # scons-0.96  
   
 # Add cc option -I<Escript>/trunk/include  
 env.Append(CPPPATH      = [Dir('include')])  
132    
133  # Add cc option -L<Escript>/trunk/lib  # PATH is needed so the compiler, linker and tools are found if they are not
134  env.Append(LIBPATH      = [Dir(env['libinstall'])])  # in default locations.
135    env = Environment(tools = ['default'], options = vars,
136                      ENV = {'PATH': os.environ['PATH']})
137    if env['tools_names'] != 'default':
138        env = Environment(tools = ['default'] + env['tools_names'], options = vars,
139                          ENV = {'PATH' : os.environ['PATH']})
140    
141    if options_file:
142        opts_valid=False
143        if 'escript_opts_version' in env.Dictionary() and \
144            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
145                opts_valid=True
146        if opts_valid:
147            print("Using options in %s." % options_file)
148        else:
149            print("\nOptions file %s" % options_file)
150            print("is outdated! Please update the file by examining one of the TEMPLATE")
151            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
152            Exit(1)
153    
154    # Generate help text (scons -h)
155    Help(vars.GenerateHelpText(env))
156    
157    # Check for superfluous options
158    if len(vars.UnknownVariables())>0:
159        for k in vars.UnknownVariables():
160            print("Unknown option '%s'" % k)
161        Exit(1)
162    
163    #################### Make sure install directories exist #####################
164    
165    env['BUILD_DIR']=env['build_dir']
166    prefix=Dir(env['prefix']).abspath
167    env['incinstall'] = os.path.join(prefix, 'include')
168    env['bininstall'] = os.path.join(prefix, 'bin')
169    env['libinstall'] = os.path.join(prefix, 'lib')
170    env['pyinstall']  = os.path.join(prefix, 'esys')
171    if not os.path.isdir(env['bininstall']):
172        os.makedirs(env['bininstall'])
173    if not os.path.isdir(env['libinstall']):
174        os.makedirs(env['libinstall'])
175    if not os.path.isdir(env['pyinstall']):
176        os.makedirs(env['pyinstall'])
177    
178    env.Append(CPPPATH = [env['incinstall']])
179    env.Append(LIBPATH = [env['libinstall']])
180    
181    ################# Fill in compiler options if not set above ##################
182    
183    if env['cc'] != 'default': env['CC']=env['cc']
184    if env['cxx'] != 'default': env['CXX']=env['cxx']
185    
186    # version >=9 of intel C++ compiler requires use of icpc to link in C++
187    # runtimes (icc does not)
188    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
189        env['LINK'] = env['CXX']
190    
191    # default compiler/linker options
192    cc_flags = ''
193    cc_optim = ''
194    cc_debug = ''
195    omp_flags = ''
196    omp_ldflags = ''
197    fatalwarning = '' # switch to turn warnings into errors
198    sysheaderopt = '' # how to indicate that a header is a system header
199    
200    # env['CC'] might be a full path
201    cc_name=os.path.basename(env['CC'])
202    
203    if cc_name == 'icc':
204        # Intel compiler
205        cc_flags    = "-std=c99 -fPIC -wd161 -w1 -vec-report0 -DBLOCKTIMER -DCORE_ID1"
206        cc_optim    = "-O3 -ftz -IPF_ftlacc- -IPF_fma -fno-alias -ip"
207        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
208        omp_flags   = "-openmp -openmp_report0"
209        omp_ldflags = "-openmp -openmp_report0 -lguide -lpthread"
210        fatalwarning = "-Werror"
211    elif cc_name[:3] == 'gcc':
212        # GNU C on any system
213        cc_flags     = "-pedantic -Wall -fPIC -ffast-math -Wno-unknown-pragmas -DBLOCKTIMER  -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
214        cc_optim     = "-O3"
215        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
216        omp_flags    = "-fopenmp"
217        omp_ldflags  = "-fopenmp"
218        fatalwarning = "-Werror"
219        sysheaderopt = "-isystem"
220    elif cc_name == 'cl':
221        # Microsoft Visual C on Windows
222        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
223        cc_optim     = "/O2 /Op /W3"
224        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
225        fatalwarning = "/WX"
226    elif cc_name == 'icl':
227        # Intel C on Windows
228        cc_flags     = '/EHsc /GR /MD'
229        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
230        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
231        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
232        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
233    
234    # set defaults if not otherwise specified
235    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
236    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
237    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
238    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
239    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
240    if env['cc_extra']  != '': env.Append(CFLAGS = env['cc_extra'])
241    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
242    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
243    
244    # set up the autolazy values
245    if env['forcelazy'] == 'on':
246        env.Append(CPPDEFINES=['FAUTOLAZYON'])
247    elif env['forcelazy'] == 'off':
248        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
249    
250    # set up the collective resolve values
251    if env['forcecollres'] == 'on':
252        env.Append(CPPDEFINES=['FRESCOLLECTON'])
253    elif env['forcecollres'] == 'off':
254        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
255    
256    # allow non-standard C if requested
257    if env['iknowwhatimdoing']:
258        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
259    
260    # Disable OpenMP if no flags provided
261    if env['openmp'] and env['omp_flags'] == '':
262       print("OpenMP requested but no flags provided - disabling OpenMP!")
263       env['openmp'] = False
264    
265    if env['openmp']:
266        env.Append(CCFLAGS = env['omp_flags'])
267        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
268    else:
269        env['omp_flags']=''
270        env['omp_ldflags']=''
271    
272    # add debug/non-debug compiler flags
273    if env['debug']:
274        env.Append(CCFLAGS = env['cc_debug'])
275    else:
276        env.Append(CCFLAGS = env['cc_optim'])
277    
278  if env['cc_extra'] != '': env.Append(CCFLAGS = env['cc_extra'])  # always add cc_flags
279  if env['ld_extra'] != '': env.Append(LINKFLAGS = env['ld_extra'])  env.Append(CCFLAGS = env['cc_flags'])
280    
281  if env['usepedantic']: env.Append(CCFLAGS = pedantic)  # add system libraries
282    env.AppendUnique(LIBS = env['sys_libs'])
283    
284  # MS Windows  # Get the global Subversion revision number for the getVersion() method
 if IS_WINDOWS_PLATFORM:  
   env.PrependENVPath('PATH',    [env['boost_lib_path']])  
   env.PrependENVPath('PATH',    [env['libinstall']])  
   if not env['share_esysUtils'] :  
     env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])  
   if not env['share_paso'] :  
     env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])  
   
   if env['usenetcdf']:  
     env.PrependENVPath('PATH',  [env['netCDF_lib_path']])  
   
 env.Append(ARFLAGS = env['ar_flags'])  
   
 # Get the global Subversion revision number for getVersion() method  
285  try:  try:
286     global_revision = os.popen("svnversion -n .").read()      global_revision = os.popen('svnversion -n .').read()
287     global_revision = re.sub(":.*", "", global_revision)      global_revision = re.sub(':.*', '', global_revision)
288     global_revision = re.sub("[^0-9]", "", global_revision)      global_revision = re.sub('[^0-9]', '', global_revision)
289        if global_revision == '': global_revision='-2'
290  except:  except:
291     global_revision="-1"      global_revision = '-1'
292  if global_revision == "": global_revision="-2"  env['svn_revision']=global_revision
293  env.Append(CPPDEFINES = ["SVN_VERSION="+global_revision])  env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
294    
295  ############ numarray (required) ###############################  if IS_WINDOWS:
296        if not env['share_esysutils']:
297            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
298        if not env['share_paso']:
299            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
300    
301    ###################### Copy required environment vars ########################
302    
303    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
304    if IS_WINDOWS:
305        LD_LIBRARY_PATH_KEY='PATH'
306        env['ENV']['LD_LIBRARY_PATH']=''
307    else:
308        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
309    
310    # the following env variables are exported for the unit tests
311    
312    for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
313        try:
314            env['ENV'][key] = os.environ[key]
315        except KeyError:
316            env['ENV'][key] = 1
317    
318    env_export=env['env_export']
319    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','TMPDIR','TEMP','TMP'])
320    
321    for key in set(env_export):
322        try:
323            env['ENV'][key] = os.environ[key]
324        except KeyError:
325            pass
326    
327  try:  try:
328    from numarray import identity      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
329  except ImportError:  except KeyError:
330    print "Cannot import numarray, you need to set your PYTHONPATH"      pass
331    sys.exit(1)  
332    # these shouldn't be needed
333  ############ C compiler (required) #############################  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
334    #    try:
335    #        env['ENV'][key] = os.environ[key]
336    #    except KeyError:
337    #        pass
338    
339  # Create a Configure() environment for checking existence of required libraries and headers  try:
340  conf = Configure(clone_env(env))      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
341    except KeyError:
342  # Test that the compiler is working      pass
 if not conf.CheckFunc('printf'):  
   print "Cannot run C compiler '%s' (or libc is missing)" % (env['CC'])  
   sys.exit(1)  
   
 if conf.CheckFunc('gethostname'):  
   conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])  
   
 ############ python libraries (required) #######################  
   
   
 if not sysheaderopt =="":  
   conf.env.Append(CCFLAGS=sysheaderopt+env['python_path'])  
 else:  
   conf.env.AppendUnique(CPPPATH     = [env['python_path']])  
   
 conf.env.AppendUnique(LIBPATH       = [env['python_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['python_libs']])  
   
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['python_lib_path'])  # The wrapper script needs to find these libs  
   
 if not conf.CheckCHeader('Python.h'):  
   print "Cannot find python include files (tried 'Python.h' in directory %s)" % (env['python_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('Py_Main'):  
   print "Cannot find python library method Py_Main (tried lib %s in directory %s)" % (env['python_libs'], env['python_lib_path'])  
   sys.exit(1)  
   
 ############ boost (required) ##################################  
   
 if not sysheaderopt =="":  
   conf.env.Append(CCFLAGS=sysheaderopt+env['boost_path']+'boost')  
 else:  
   conf.env.AppendUnique(CPPPATH     = [env['boost_path']])  
   
 conf.env.AppendUnique(LIBPATH       = [env['boost_lib_path']])  
 conf.env.AppendUnique(LIBS      = [env['boost_libs']])  
   
 conf.env.PrependENVPath('LD_LIBRARY_PATH', env['boost_lib_path'])   # The wrapper script needs to find these libs  
   
 if not conf.CheckCXXHeader('boost/python.hpp'):  
   print "Cannot find boost include files (tried boost/python.hpp in directory %s)" % (env['boost_path'])  
   sys.exit(1)  
 if not conf.CheckFunc('PyObject_SetAttr'):  
   print "Cannot find boost library method PyObject_SetAttr (tried method PyObject_SetAttr in library %s in directory %s)" % (env['boost_libs'], env['boost_lib_path'])  
   sys.exit(1)  
   
 # Commit changes to environment  
 env = conf.Finish()  
   
 ############ VTK (optional) ####################################  
   
 if env['usevtk']:  
   try:  
     import vtk  
     env['usevtk'] = 1  
   except ImportError:  
     env['usevtk'] = 0  
   
 # Add VTK to environment env if it was found  
 if env['usevtk']:  
   env.Append(CPPDEFINES = ['USE_VTK'])  
   
 ############ NetCDF (optional) #################################  
   
 conf = Configure(clone_env(env))  
   
 if env['usenetcdf']:  
   conf.env.AppendUnique(CPPPATH = [env['netCDF_path']])  
   conf.env.AppendUnique(LIBPATH = [env['netCDF_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['netCDF_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['netCDF_lib_path'])    # The wrapper script needs to find these libs  
   
 if env['usenetcdf'] and not conf.CheckCHeader('netcdf.h'): env['usenetcdf'] = 0  
 if env['usenetcdf'] and not conf.CheckFunc('nc_open'): env['usenetcdf'] = 0  
343    
344  # Add NetCDF to environment env if it was found  ######################## Add some custom builders ############################
 if env['usenetcdf']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['USE_NETCDF'])  
 else:  
   conf.Finish()  
345    
346  ############ PAPI (optional) ###################################  py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
347    env.Append(BUILDERS = {'PyCompile' : py_builder});
348    
349  # Start a new configure environment that reflects what we've already found  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
350  conf = Configure(clone_env(env))  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
351    
352  if env['usepapi']:  runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
353    conf.env.AppendUnique(CPPPATH = [env['papi_path']])  env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
   conf.env.AppendUnique(LIBPATH = [env['papi_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['papi_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['papi_lib_path'])  # The wrapper script needs to find these libs  
354    
355  if env['usepapi'] and not conf.CheckCHeader('papi.h'): env['usepapi'] = 0  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
356  if env['usepapi'] and not conf.CheckFunc('PAPI_start_counters'): env['usepapi'] = 0  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
357    
358  # Add PAPI to environment env if it was found  ############################ Dependency checks ###############################
 if env['usepapi']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['BLOCKPAPI'])  
 else:  
   conf.Finish()  
359    
360  ############ MKL (optional) ####################################  # Create a Configure() environment to check for compilers and python
361    conf = Configure(env.Clone())
362    
363  # Start a new configure environment that reflects what we've already found  ######## Test that the compilers work
364  conf = Configure(clone_env(env))  
365    if 'CheckCC' in dir(conf): # exists since scons 1.1.0
366        if not conf.CheckCC():
367            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
368            Exit(1)
369        if not conf.CheckCXX():
370            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
371            Exit(1)
372    else:
373        if not conf.CheckFunc('printf', language='c'):
374            print("Cannot run C compiler '%s' (check config.log)" % (env['CC']))
375            Exit(1)
376        if not conf.CheckFunc('printf', language='c++'):
377            print("Cannot run C++ compiler '%s' (check config.log)" % (env['CXX']))
378            Exit(1)
379    
380  if env['usemkl']:  if conf.CheckFunc('gethostname'):
381    conf.env.AppendUnique(CPPPATH = [env['mkl_path']])      conf.env.Append(CPPDEFINES = ['HAVE_GETHOSTNAME'])
   conf.env.AppendUnique(LIBPATH = [env['mkl_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['mkl_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mkl_lib_path'])   # The wrapper script needs to find these libs  
382    
383  if env['usemkl'] and not conf.CheckCHeader('mkl_solver.h'): env['usemkl'] = 0  ######## Python headers & library (required)
 if env['usemkl'] and not conf.CheckFunc('pardiso_'): env['usemkl'] = 0  
384    
385  # Add MKL to environment env if it was found  python_inc_path=sysconfig.get_python_inc()
386  if env['usemkl']:  if IS_WINDOWS:
387    env = conf.Finish()      python_lib_path=os.path.join(sysconfig.get_config_var('prefix'), 'libs')
388    env.Append(CPPDEFINES = ['MKL'])  elif env['PLATFORM']=='darwin':
389        python_lib_path=sysconfig.get_config_var('LIBPL')
390  else:  else:
391    conf.Finish()      python_lib_path=sysconfig.get_config_var('LIBDIR')
392    #python_libs=[sysconfig.get_config_var('LDLIBRARY')] # only on linux
393  ############ UMFPACK (optional) ################################  if IS_WINDOWS:
394        python_libs=['python%s%s'%(sys.version_info[0], sys.version_info[1])]
 # Start a new configure environment that reflects what we've already found  
 conf = Configure(clone_env(env))  
   
 if env['useumfpack']:  
   conf.env.AppendUnique(CPPPATH = [env['ufc_path']])  
   conf.env.AppendUnique(CPPPATH = [env['umf_path']])  
   conf.env.AppendUnique(LIBPATH = [env['umf_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['umf_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['amd_path']])  
   conf.env.AppendUnique(LIBPATH = [env['amd_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['amd_libs']])  
   conf.env.AppendUnique(CPPPATH = [env['blas_path']])  
   conf.env.AppendUnique(LIBPATH = [env['blas_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env['blas_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['umf_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['amd_lib_path'])   # The wrapper script needs to find these libs  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['blas_lib_path'])  # The wrapper script needs to find these libs  
   
 if env['useumfpack'] and not conf.CheckCHeader('umfpack.h'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('umfpack_di_symbolic'): env['useumfpack'] = 0  
 if env['useumfpack'] and not conf.CheckFunc('daxpy'): env['useumfpack'] = 0 # this does not work on shake73?  
   
 # Add UMFPACK to environment env if it was found  
 if env['useumfpack']:  
   env = conf.Finish()  
   env.Append(CPPDEFINES = ['UMFPACK'])  
395  else:  else:
396    conf.Finish()      python_libs=['python'+sysconfig.get_python_version()]
397    
398  ############ Add the compiler flags ############################  if sysheaderopt == '':
399        conf.env.AppendUnique(CPPPATH = [python_inc_path])
 # Enable debug by choosing either cc_debug or cc_optim  
 if env['usedebug']:  
   env.Append(CCFLAGS        = env['cc_debug'])  
   env.Append(CCFLAGS        = env['omp_debug'])  
400  else:  else:
401    env.Append(CCFLAGS        = env['cc_optim'])      conf.env.Append(CCFLAGS = [sysheaderopt, python_inc_path])
   env.Append(CCFLAGS        = env['omp_optim'])  
402    
403  # Always use cc_flags  conf.env.AppendUnique(LIBPATH = [python_lib_path])
404  env.Append(CCFLAGS      = env['cc_flags'])  conf.env.AppendUnique(LIBS = python_libs)
405  env.Append(LIBS         = [env['omp_libs']])  # The wrapper script needs to find the libs
406    conf.env.PrependENVPath(LD_LIBRARY_PATH_KEY, python_lib_path)
407    
408  ############ MPI (optional) ####################################  if not conf.CheckCHeader('Python.h'):
409        print("Cannot find python include files (tried 'Python.h' in directory %s)" % (python_inc_path))
410        Exit(1)
411    if not conf.CheckFunc('Py_Exit'):
412        print("Cannot find python library method Py_Main (tried %s in directory %s)" % (python_libs, python_lib_path))
413        Exit(1)
414    
415  # Create a modified environment for MPI programs (identical to env if usempi=no)  # Commit changes to environment
416  env_mpi = clone_env(env)  env = conf.Finish()
417    
418  # Start a new configure environment that reflects what we've already found  ######## boost (required)
 conf = Configure(clone_env(env_mpi))  
419    
420  if env_mpi['usempi']:  boost_inc_path,boost_lib_path=findLibWithHeader(env, env['boost_libs'], 'boost/python.hpp', env['boost_prefix'], lang='c++')
421    conf.env.AppendUnique(CPPPATH = [env_mpi['mpi_path']])  if sysheaderopt == '':
422    conf.env.AppendUnique(LIBPATH = [env_mpi['mpi_lib_path']])      env.AppendUnique(CPPPATH = [boost_inc_path])
423    conf.env.AppendUnique(LIBS    = [env_mpi['mpi_libs']])  else:
424    conf.env.PrependENVPath('LD_LIBRARY_PATH', env['mpi_lib_path'])   # The wrapper script needs to find these libs      # This is required because we can't -isystem /usr/include since it breaks
425        # std includes
426        if os.path.normpath(boost_inc_path) == '/usr/include':
427            conf.env.Append(CCFLAGS=[sysheaderopt, os.path.join(boost_inc_path,'boost')])
428        else:
429            env.Append(CCFLAGS=[sysheaderopt, boost_inc_path])
430    
431    env.AppendUnique(LIBPATH = [boost_lib_path])
432    env.AppendUnique(LIBS = env['boost_libs'])
433    env.PrependENVPath(LD_LIBRARY_PATH_KEY, boost_lib_path)
434    
435  if env_mpi['usempi'] and not conf.CheckCHeader('mpi.h'): env_mpi['usempi'] = 0  ######## numpy (required)
 if env_mpi['usempi'] and not conf.CheckFunc('MPI_Init'): env_mpi['usempi'] = 0  
436    
437  # Add MPI to environment env_mpi if it was found  try:
438  if env_mpi['usempi']:      from numpy import identity
439    env_mpi = conf.Finish()  except ImportError:
440    env_mpi.Append(CPPDEFINES = ['PASO_MPI', 'MPI_NO_CPPBIND', env_mpi['MPICH_IGNORE_CXX_SEEK']])      print("Cannot import numpy, you need to set your PYTHONPATH and probably %s"%LD_LIBRARY_PATH_KEY)
441  else:      Exit(1)
   conf.Finish()  
442    
443  env['usempi'] = env_mpi['usempi']  ######## VTK (optional)
444    
445  ############ ParMETIS (optional) ###############################  if env['pyvisi']:
446        try:
447            import vtk
448            env['pyvisi'] = True
449        except ImportError:
450            print("Cannot import vtk, disabling pyvisi.")
451            env['pyvisi'] = False
452    
453    ######## netCDF (optional)
454    
455    netcdf_inc_path=''
456    netcdf_lib_path=''
457    if env['netcdf']:
458        netcdf_inc_path,netcdf_lib_path=findLibWithHeader(env, env['netcdf_libs'], 'netcdf.h', env['netcdf_prefix'], lang='c++')
459        env.AppendUnique(CPPPATH = [netcdf_inc_path])
460        env.AppendUnique(LIBPATH = [netcdf_lib_path])
461        env.AppendUnique(LIBS = env['netcdf_libs'])
462        env.PrependENVPath(LD_LIBRARY_PATH_KEY, netcdf_lib_path)
463        env.Append(CPPDEFINES = ['USE_NETCDF'])
464    
465    ######## PAPI (optional)
466    
467    papi_inc_path=''
468    papi_lib_path=''
469    if env['papi']:
470        papi_inc_path,papi_lib_path=findLibWithHeader(env, env['papi_libs'], 'papi.h', env['papi_prefix'], lang='c')
471        env.AppendUnique(CPPPATH = [papi_inc_path])
472        env.AppendUnique(LIBPATH = [papi_lib_path])
473        env.AppendUnique(LIBS = env['papi_libs'])
474        env.PrependENVPath(LD_LIBRARY_PATH_KEY, papi_lib_path)
475        env.Append(CPPDEFINES = ['BLOCKPAPI'])
476    
477    ######## MKL (optional)
478    
479    mkl_inc_path=''
480    mkl_lib_path=''
481    if env['mkl']:
482        mkl_inc_path,mkl_lib_path=findLibWithHeader(env, env['mkl_libs'], 'mkl_solver.h', env['mkl_prefix'], lang='c')
483        env.AppendUnique(CPPPATH = [mkl_inc_path])
484        env.AppendUnique(LIBPATH = [mkl_lib_path])
485        env.AppendUnique(LIBS = env['mkl_libs'])
486        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mkl_lib_path)
487        env.Append(CPPDEFINES = ['MKL'])
488    
489    ######## UMFPACK (optional)
490    
491    umfpack_inc_path=''
492    umfpack_lib_path=''
493    if env['umfpack']:
494        umfpack_inc_path,umfpack_lib_path=findLibWithHeader(env, env['umfpack_libs'], 'umfpack.h', env['umfpack_prefix'], lang='c')
495        env.AppendUnique(CPPPATH = [umfpack_inc_path])
496        env.AppendUnique(LIBPATH = [umfpack_lib_path])
497        env.AppendUnique(LIBS = env['umfpack_libs'])
498        env.PrependENVPath(LD_LIBRARY_PATH_KEY, umfpack_lib_path)
499        env.Append(CPPDEFINES = ['UMFPACK'])
500    
501    ######## LAPACK (optional)
502    
503    if env['lapack']=='mkl' and not env['mkl']:
504        print("mkl_lapack requires MKL!")
505        Exit(1)
506    
507    env['uselapack'] = env['lapack']!='none'
508    lapack_inc_path=''
509    lapack_lib_path=''
510    if env['uselapack']:
511        header='clapack.h'
512        if env['lapack']=='mkl':
513            env.AppendUnique(CPPDEFINES = ['MKL_LAPACK'])
514            header='mkl_lapack.h'
515        lapack_inc_path,lapack_lib_path=findLibWithHeader(env, env['lapack_libs'], header, env['lapack_prefix'], lang='c')
516        env.AppendUnique(CPPPATH = [lapack_inc_path])
517        env.AppendUnique(LIBPATH = [lapack_lib_path])
518        env.AppendUnique(LIBS = env['lapack_libs'])
519        env.Append(CPPDEFINES = ['USE_LAPACK'])
520    
521    ######## Silo (optional)
522    
523    silo_inc_path=''
524    silo_lib_path=''
525    if env['silo']:
526        silo_inc_path,silo_lib_path=findLibWithHeader(env, env['silo_libs'], 'silo.h', env['silo_prefix'], lang='c')
527        env.AppendUnique(CPPPATH = [silo_inc_path])
528        env.AppendUnique(LIBPATH = [silo_lib_path])
529        # Note that we do not add the libs since they are only needed for the
530        # weipa library and tools.
531        #env.AppendUnique(LIBS = [env['silo_libs']])
532    
533    ######## VSL random numbers (optional)
534    if env['vsl_random']:
535        env.Append(CPPDEFINES = ['MKLRANDOM'])
536    
537    ######## VisIt (optional)
538    
539    visit_inc_path=''
540    visit_lib_path=''
541    if env['visit']:
542        visit_inc_path,visit_lib_path=findLibWithHeader(env, env['visit_libs'], 'VisItControlInterface_V2.h', env['visit_prefix'], lang='c')
543        env.AppendUnique(CPPPATH = [visit_inc_path])
544        env.AppendUnique(LIBPATH = [visit_lib_path])
545    
546    ######## MPI (optional)
547    
548    env['usempi'] = env['mpi']!='none'
549    mpi_inc_path=''
550    mpi_lib_path=''
551    if env['usempi']:
552        mpi_inc_path,mpi_lib_path=findLibWithHeader(env, env['mpi_libs'], 'mpi.h', env['mpi_prefix'], lang='c')
553        env.AppendUnique(CPPPATH = [mpi_inc_path])
554        env.AppendUnique(LIBPATH = [mpi_lib_path])
555        env.AppendUnique(LIBS = env['mpi_libs'])
556        env.PrependENVPath(LD_LIBRARY_PATH_KEY, mpi_lib_path)
557        env.Append(CPPDEFINES = ['ESYS_MPI', 'MPI_NO_CPPBIND', 'MPICH_IGNORE_CXX_SEEK'])
558        # NetCDF 4.1 defines MPI_Comm et al. if MPI_INCLUDED is not defined!
559        # On the other hand MPT and OpenMPI don't define the latter so we have to
560        # do that here
561        if env['netcdf'] and env['mpi'] in ['MPT','OPENMPI']:
562            env.Append(CPPDEFINES = ['MPI_INCLUDED'])
563    
564    ######## BOOMERAMG (optional)
565    
566    #if env['boomeramg'] and env['mpi'] == 'none':
567    #    print("boomeramg requires mpi!")
568    #    Exit(1)
569    if env['mpi'] == 'none': env['boomeramg'] = False
570    
571    boomeramg_inc_path=''
572    boomeramg_lib_path=''
573    if env['boomeramg']:
574        boomeramg_inc_path,boomeramg_lib_path=findLibWithHeader(env, env['boomeramg_libs'], 'HYPRE.h', env['boomeramg_prefix'], lang='c')
575        env.AppendUnique(CPPPATH = [boomeramg_inc_path])
576        env.AppendUnique(LIBPATH = [boomeramg_lib_path])
577        # Note that we do not add the libs since they are only needed for the
578        # weipa library and tools.
579        env.AppendUnique(LIBS = env['boomeramg_libs'])
580        env.PrependENVPath(LD_LIBRARY_PATH_KEY, boomeramg_lib_path)
581        env.Append(CPPDEFINES = ['BOOMERAMG'])
582    
583    ######## ParMETIS (optional)
584    
585    if not env['usempi']: env['parmetis'] = False
586    
587    parmetis_inc_path=''
588    parmetis_lib_path=''
589    if env['parmetis']:
590        parmetis_inc_path,parmetis_lib_path=findLibWithHeader(env, env['parmetis_libs'], 'parmetis.h', env['parmetis_prefix'], lang='c')
591        env.AppendUnique(CPPPATH = [parmetis_inc_path])
592        env.AppendUnique(LIBPATH = [parmetis_lib_path])
593        env.AppendUnique(LIBS = env['parmetis_libs'])
594        env.PrependENVPath(LD_LIBRARY_PATH_KEY, parmetis_lib_path)
595        env.Append(CPPDEFINES = ['USE_PARMETIS'])
596    
597  # Start a new configure environment that reflects what we've already found  ######## gmsh (optional, for tests)
 conf = Configure(clone_env(env_mpi))  
598    
599  if not env_mpi['usempi']: env_mpi['useparmetis'] = 0  try:
600        import subprocess
601        p=subprocess.Popen(['gmsh', '-info'], stderr=subprocess.PIPE)
602        _,e=p.communicate()
603        if e.split().count("MPI"):
604            env['gmsh']='m'
605        else:
606            env['gmsh']='s'
607    except OSError:
608        env['gmsh']=False
609    
610  if env_mpi['useparmetis']:  ######################## Summarize our environment ###########################
   conf.env.AppendUnique(CPPPATH = [env_mpi['parmetis_path']])  
   conf.env.AppendUnique(LIBPATH = [env_mpi['parmetis_lib_path']])  
   conf.env.AppendUnique(LIBS    = [env_mpi['parmetis_libs']])  
   conf.env.PrependENVPath('LD_LIBRARY_PATH', env['parmetis_lib_path'])  # The wrapper script needs to find these libs  
611    
612  if env_mpi['useparmetis'] and not conf.CheckCHeader('parmetis.h'): env_mpi['useparmetis'] = 0  # keep some of our install paths first in the list for the unit tests
613  if env_mpi['useparmetis'] and not conf.CheckFunc('ParMETIS_V3_PartGeomKway'): env_mpi['useparmetis'] = 0  env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
614    env.PrependENVPath('PYTHONPATH', prefix)
615    env['ENV']['ESCRIPT_ROOT'] = prefix
616    
617  # Add ParMETIS to environment env_mpi if it was found  if not env['verbose']:
618  if env_mpi['useparmetis']:      env['CCCOMSTR'] = "Compiling $TARGET"
619    env_mpi = conf.Finish()      env['CXXCOMSTR'] = "Compiling $TARGET"
620    env_mpi.Append(CPPDEFINES = ['USE_PARMETIS'])      env['SHCCCOMSTR'] = "Compiling $TARGET"
621        env['SHCXXCOMSTR'] = "Compiling $TARGET"
622        env['ARCOMSTR'] = "Linking $TARGET"
623        env['LINKCOMSTR'] = "Linking $TARGET"
624        env['SHLINKCOMSTR'] = "Linking $TARGET"
625        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
626        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
627        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
628        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
629        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
630    
631    print("")
632    print("*** Config Summary (see config.log and lib/buildvars for details) ***")
633    print("Escript/Finley revision %s"%global_revision)
634    print("  Install prefix:  %s"%env['prefix'])
635    print("          Python:  %s"%sysconfig.PREFIX)
636    print("           boost:  %s"%env['boost_prefix'])
637    print("           numpy:  YES")
638    if env['usempi']:
639        print("             MPI:  YES (flavour: %s)"%env['mpi'])
640  else:  else:
641    conf.Finish()      print("             MPI:  DISABLED")
642    if env['uselapack']:
643  env['useparmetis'] = env_mpi['useparmetis']      print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
644    else:
645  ############ Now we switch on Warnings as errors ###############      print("          LAPACK:  DISABLED")
646    d_list=[]
647  #this needs to be done after configuration because the scons test files have warnings in them  e_list=[]
648    for i in 'debug','openmp','netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
649  if ((fatalwarning != "") and (env['usewarnings'])):      if env[i]: e_list.append(i)
650    env.Append(CCFLAGS        = fatalwarning)      else: d_list.append(i)
651    env_mpi.Append(CCFLAGS        = fatalwarning)  for i in e_list:
652        print("%16s:  YES"%i)
653  ############ Summarize our environment #########################  for i in d_list:
654        print("%16s:  DISABLED"%i)
655  print ""  if env['gmsh']=='m':
656  print "Summary of configuration (see ./config.log for information)"      print("            gmsh:  FOUND, MPI-ENABLED")
657  print " Using python libraries"  elif env['gmsh']=='s':
658  print " Using numarray"      print("            gmsh:  FOUND")
659  print " Using boost"  else:
660  if env['usenetcdf']: print "    Using NetCDF"      print("            gmsh:  NOT FOUND")
661  else: print "   Not using NetCDF"  print("      vsl_random:  %s"%env['vsl_random'])
662  if env['usevtk']: print "   Using VTK"      
663  else: print "   Not using VTK"  if ((fatalwarning != '') and (env['werror'])):
664  if env['usemkl']: print "   Using MKL"      print("  Treating warnings as errors")
665  else: print "   Not using MKL"  else:
666  if env['useumfpack']: print "   Using UMFPACK"      print("  NOT treating warnings as errors")
667  else: print "   Not using UMFPACK"  print("")
668  if env['useopenmp']: print "    Using OpenMP"  
669  else: print "   Not using OpenMP"  ####################### Configure the subdirectories #########################
670  if env['usempi']: print "   Using MPI"  
671  else: print "   Not using MPI"  from grouptest import *
672  if env['useparmetis']: print "  Using ParMETIS"  
673  else: print "   Not using ParMETIS (requires MPI)"  TestGroups=[]
674  if env['usepapi']: print "  Using PAPI"  
675  else: print "   Not using PAPI"  # keep an environment without warnings-as-errors
676  if env['usedebug']: print " Compiling for debug"  dodgy_env=env.Clone()
677  else: print "   Not compiling for debug"  
678  print " Installing in", prefix  # now add warnings-as-errors flags. This needs to be done after configuration
679  if ((fatalwarning != "") and (env['usewarnings'])): print " Treating warnings as errors"  # because the scons test files have warnings in them
680  else: print "   Not treating warnings as errors"  if ((fatalwarning != '') and (env['werror'])):
681  print ""      env.Append(CCFLAGS = fatalwarning)
   
 ############ Delete option-dependent files #####################  
   
 Execute(Delete(env['libinstall'] + "/Compiled.with.debug"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.mpi"))  
 Execute(Delete(env['libinstall'] + "/Compiled.with.openmp"))  
 if not env['usempi']: Execute(Delete(env['libinstall'] + "/pythonMPI"))  
   
 ############ Add some custom builders ##########################  
   
 py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)  
 env.Append(BUILDERS = {'PyCompile' : py_builder});  
   
 runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)  
 env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});  
   
 runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  
 env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
   
 ############ Build the subdirectories ##########################  
682    
683  Export(  Export(
684    ["env",    ['env',
685     "env_mpi",     'dodgy_env',
686     "clone_env",     'IS_WINDOWS',
687     "IS_WINDOWS_PLATFORM"     'TestGroups'
688     ]    ]
689    )  )
   
 env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 env.SConscript(dirs = ['scripts'], build_dir='build/$PLATFORM/scripts', duplicate=0)  
   
 ############ Remember what optimizations we used ###############  
   
 remember_list = []  
690    
691  if env['usedebug']:  env.SConscript(dirs = ['tools/CppUnitTest/src'], variant_dir='$BUILD_DIR/$PLATFORM/tools/CppUnitTest', duplicate=0)
692    remember_list += env.Command(env['libinstall'] + "/Compiled.with.debug", None, Touch('$TARGET'))  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
693    env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
694    env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
695    env.SConscript(dirs = ['escript/src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
696    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
697    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
698    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
699    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
700    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
701    env.SConscript(dirs = ['pyvisi/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pyvisi', duplicate=0)
702    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
703    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
704    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
705    
706    ######################## Populate the buildvars file #########################
707    
708    # remove obsolete file
709    if not env['usempi']:
710        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
711        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
712    
713    # Try to extract the boost version from version.hpp
714    boosthpp=open(os.path.join(boost_inc_path, 'boost', 'version.hpp'))
715    boostversion='unknown'
716    try:
717        for line in boosthpp:
718            ver=re.match(r'#define BOOST_VERSION (\d+)',line)
719            if ver:
720                boostversion=ver.group(1)
721    except StopIteration:
722        pass
723    boosthpp.close()
724    
725    buildvars=open(os.path.join(env['libinstall'], 'buildvars'), 'w')
726    buildvars.write("svn_revision="+str(global_revision)+"\n")
727    buildvars.write("prefix="+prefix+"\n")
728    buildvars.write("cc="+env['CC']+"\n")
729    buildvars.write("cxx="+env['CXX']+"\n")
730    buildvars.write("python="+sys.executable+"\n")
731    buildvars.write("python_version="+str(sys.version_info[0])+"."+str(sys.version_info[1])+"."+str(sys.version_info[2])+"\n")
732    buildvars.write("boost_inc_path="+boost_inc_path+"\n")
733    buildvars.write("boost_lib_path="+boost_lib_path+"\n")
734    buildvars.write("boost_version="+boostversion+"\n")
735    buildvars.write("debug=%d\n"%int(env['debug']))
736    buildvars.write("openmp=%d\n"%int(env['openmp']))
737    buildvars.write("mpi=%s\n"%env['mpi'])
738    buildvars.write("mpi_inc_path=%s\n"%mpi_inc_path)
739    buildvars.write("mpi_lib_path=%s\n"%mpi_lib_path)
740    buildvars.write("lapack=%s\n"%env['lapack'])
741    buildvars.write("pyvisi=%d\n"%env['pyvisi'])
742    buildvars.write("vsl_random=%d\n"%int(env['vsl_random']))
743    for i in 'netcdf','parmetis','papi','mkl','umfpack','boomeramg','silo','visit':
744        buildvars.write("%s=%d\n"%(i, int(env[i])))
745        if env[i]:
746            buildvars.write("%s_inc_path=%s\n"%(i, eval(i+'_inc_path')))
747            buildvars.write("%s_lib_path=%s\n"%(i, eval(i+'_lib_path')))
748    buildvars.close()
749    
750  if env['usempi']:  ################### Targets to build and install libraries ###################
   remember_list += env.Command(env['libinstall'] + "/Compiled.with.mpi", None, Touch('$TARGET'))  
751    
752  if env['omp_optim'] != '':  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))
753    remember_list += env.Command(env['libinstall'] + "/Compiled.with.openmp", None, Touch('$TARGET'))  env.Alias('target_init', [target_init])
754    
755  env.Alias('remember_options', remember_list)  # The headers have to be installed prior to build in order to satisfy
756    # #include <paso/Common.h>
757    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
758    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
759    
760  ############ Targets to build and install libraries ############  env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
761    env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
762    
763  target_init = env.Command(env['pyinstall']+'/__init__.py', None, Touch('$TARGET'))  env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
764  env.Alias('target_init', [target_init])  env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escript_py'])
765    
766  # The headers have to be installed prior to build in order to satisfy #include <paso/Common.h>  env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
767  env.Alias('build_esysUtils', ['target_install_esysUtils_headers', 'target_esysUtils_a'])  env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
 env.Alias('install_esysUtils', ['build_esysUtils', 'target_install_esysUtils_a'])  
768    
769  env.Alias('build_paso', ['target_install_paso_headers', 'target_paso_a'])  env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
770  env.Alias('install_paso', ['build_paso', 'target_install_paso_a'])  env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
771    
772  env.Alias('build_escript', ['target_install_escript_headers', 'target_escript_so', 'target_escriptcpp_so'])  env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
773  env.Alias('install_escript', ['build_escript', 'target_install_escript_so', 'target_install_escriptcpp_so', 'target_install_escript_py'])  env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
774    
775  env.Alias('build_finley', ['target_install_finley_headers', 'target_finley_so', 'target_finleycpp_so'])  env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
776  env.Alias('install_finley', ['build_finley', 'target_install_finley_so', 'target_install_finleycpp_so', 'target_install_finley_py'])  env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
777    
778  # Now gather all the above into a couple easy targets: build_all and install_all  # Now gather all the above into some easy targets: build_all and install_all
779  build_all_list = []  build_all_list = []
780  build_all_list += ['build_esysUtils']  build_all_list += ['build_esysUtils']
781  build_all_list += ['build_paso']  build_all_list += ['build_paso']
782  build_all_list += ['build_escript']  build_all_list += ['build_escript']
783    build_all_list += ['build_dudley']
784  build_all_list += ['build_finley']  build_all_list += ['build_finley']
785  if env['usempi']:       build_all_list += ['target_pythonMPI_exe']  build_all_list += ['build_weipa']
786  if not IS_WINDOWS_PLATFORM: build_all_list += ['target_finley_wrapper']  if not IS_WINDOWS: build_all_list += ['build_escriptreader']
787    if env['usempi']:   build_all_list += ['build_pythonMPI']
788    build_all_list += ['build_escriptconvert']
789  env.Alias('build_all', build_all_list)  env.Alias('build_all', build_all_list)
790    
791  install_all_list = []  install_all_list = []
# Line 665  install_all_list += ['target_init'] Line 793  install_all_list += ['target_init']
793  install_all_list += ['install_esysUtils']  install_all_list += ['install_esysUtils']
794  install_all_list += ['install_paso']  install_all_list += ['install_paso']
795  install_all_list += ['install_escript']  install_all_list += ['install_escript']
796    install_all_list += ['install_dudley']
797  install_all_list += ['install_finley']  install_all_list += ['install_finley']
798  install_all_list += ['target_install_pyvisi_py']  install_all_list += ['install_weipa']
799  install_all_list += ['target_install_modellib_py']  if not IS_WINDOWS: install_all_list += ['install_escriptreader']
800  install_all_list += ['target_install_pycad_py']  install_all_list += ['install_pyvisi_py']
801  if env['usempi']:       install_all_list += ['target_install_pythonMPI_exe']  install_all_list += ['install_modellib_py']
802  if not IS_WINDOWS_PLATFORM: install_all_list += ['target_install_finley_wrapper']  install_all_list += ['install_pycad_py']
803  install_all_list += ['remember_options']  if env['usempi']:   install_all_list += ['install_pythonMPI']
804    install_all_list += ['install_escriptconvert']
805  env.Alias('install_all', install_all_list)  env.Alias('install_all', install_all_list)
806    
807  # Default target is install  # Default target is install
808  env.Default('install_all')  env.Default('install_all')
809    
810  ############ Targets to build and run the test suite ###########  ################## Targets to build and run the test suite ###################
   
 env.Alias('build_cppunittest', ['target_install_cppunittest_headers', 'target_cppunittest_a'])  
 env.Alias('install_cppunittest', ['build_cppunittest', 'target_install_cppunittest_a'])  
 env.Alias('run_tests', ['install_all', 'target_install_cppunittest_a'])  
 env.Alias('all_tests', ['install_all', 'target_install_cppunittest_a', 'run_tests', 'py_tests'])  
   
 ############ Targets to build the documentation ################  
811    
812  env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'guide_pdf', 'guide_html'])  env.Alias('build_cppunittest', ['install_cppunittest_headers', 'build_cppunittest_lib'])
813    env.Alias('install_cppunittest', ['build_cppunittest', 'install_cppunittest_lib'])
814    env.Alias('run_tests', ['install_all', 'install_cppunittest_lib'])
815    env.Alias('all_tests', ['install_all', 'install_cppunittest_lib', 'run_tests', 'py_tests'])
816    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
817    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
818    
819    ##################### Targets to build the documentation #####################
820    
821    env.Alias('api_epydoc','install_all')
822    env.Alias('docs', ['examples_tarfile', 'examples_zipfile', 'api_epydoc', 'api_doxygen', 'user_pdf', 'install_pdf', 'cookbook_pdf'])
823    env.Alias('release_prep', ['docs', 'install_all'])
824    
825    if not IS_WINDOWS:
826        try:
827            utest=open('utest.sh','w')
828            utest.write(GroupTest.makeHeader(env['PLATFORM']))
829            for tests in TestGroups:
830                utest.write(tests.makeString())
831            utest.close()
832            Execute(Chmod('utest.sh', 0755))
833            print("Generated utest.sh.")
834        except IOError:
835            print("Error attempting to write unittests file.")
836            Exit(1)
837    
838        # Make sure that the escript wrapper is in place
839        if not os.path.isfile(os.path.join(env['bininstall'], 'run-escript')):
840            print("Copying escript wrapper.")
841            Execute(Copy(os.path.join(env['bininstall'],'run-escript'), 'bin/run-escript'))
842    

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