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revision 1215 by ksteube, Thu Jul 12 01:14:55 2007 UTC revision 5123 by sshaw, Thu Aug 28 07:02:11 2014 UTC
# Line 1  Line 1 
1  #         Copyright 2006 by ACcESS MNRF  ##############################################################################
2  #  #
3  #              http://www.access.edu.au  # Copyright (c) 2003-2014 by University of Queensland
4  #       Primary Business: Queensland, Australia  # http://www.uq.edu.au
 #  Licensed under the Open Software License version 3.0  
 #     http://www.opensource.org/licenses/osl-3.0.php  
   
 # top-level Scons configuration file for all esys13 modules  
 # Begin initialisation Section  
 # all of this section just intialises default environments and helper  
 # scripts. You shouldn't need to modify this section.  
 EnsureSConsVersion(0,96,91)  
 EnsurePythonVersion(2,3)  
   
 #===============================================================  
 #   import tools:  
 import glob  
 import sys, os  
 import socket  
 # Add our extensions  
 if sys.path.count('scons')==0: sys.path.append('scons')  
 import scons_extensions  
   
 #===============================================================  
 #   check on windows or linux platform  
 #  
 IS_WINDOWS_PLATFORM = (os.name== "nt")  
   
 if IS_WINDOWS_PLATFORM:  
    tools_prefix="C:\\Program Files\\"  
 else:  
    tools_prefix="/usr"  
   
 #==============================================================================================      
 #      
 #    get the installation prefix  
 #  
 prefix = ARGUMENTS.get('prefix', Dir('#.').abspath)  
 print "Install prefix is: ", prefix  
   
 # Default options and options help text  
 # These are defaults and can be overridden using command line arguments or an options file.  
 # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used  
 # DO NOT CHANGE THEM HERE  
 # Where to install?  
 #==============================================================================================      
 #      
 #    get the options file if present:  
 #  
 if ARGUMENTS.get('options_file',0):  
    options_file = ARGUMENTS.get('options_file',0)  
 else:  
    from string import ascii_letters,digits  
    hostname=""  
    for s in socket.gethostname().split('.')[0]:  
       if s in ascii_letters+digits:  
          hostname+=s  
       else:  
          hostname+="_"  
    options_file = os.path.join("scons",hostname+"_options.py")  
     
 if os.path.isfile(options_file):  
    print "option file is ",options_file,"."  
 else:  
    print "option file is ",options_file, "(not present)."  
 # and load it  
 opts = Options(options_file, ARGUMENTS)  
 #================================================================  
 #  
 #   check if UMFPACK is installed on the system:  
 #  
 uf_root=None  
 for i in [ 'UMFPACK', 'umfpack', 'ufsparse', 'UFSPARSE']:  
    if os.path.isdir(os.path.join(tools_prefix,'include',i)):  
        uf_root=i  
        print i," is used form ",tools_prefix  
        break  
 if not uf_root==None:  
    umf_path_default=os.path.join(tools_prefix,'include',uf_root)  
    umf_lib_path_default=os.path.join(tools_prefix,'lib')  
    umf_libs_default=['umfpack']  
    amd_path_default=os.path.join(tools_prefix,'include',uf_root)  
    amd_lib_path_default=os.path.join(tools_prefix,'lib')  
    amd_libs_default=['amd']  
    ufc_path_default=os.path.join(tools_prefix,'include',uf_root)  
 else:  
    umf_path_default=None  
    umf_lib_path_default=None  
    umf_libs_default=None  
    amd_path_default=None  
    amd_lib_path_default=None  
    amd_libs_default=None  
    ufc_path_default=None  
 #  
 #==========================================================================  
 #  
 #    python installation:  
 #  
 if IS_WINDOWS_PLATFORM:  
    python_path_default=os.path.join(tools_prefix,'python%s%s'%(sys.version_info[0],sys.version_info[1]),"include")  
    python_lib_path_default=os.path.join(tools_prefix,'python%s%s'%(sys.version_info[0],sys.version_info[1]),"libs")  
    python_libs_default=["python%s%s"%(sys.version_info[0],sys.version_info[1])]  
 else:  
    python_path_default=os.path.join(tools_prefix,'include','python%s.%s'%(sys.version_info[0],sys.version_info[1]))  
    python_lib_path_default=os.path.join(tools_prefix,'lib')  
    python_libs_default=["python%s.%s"%(sys.version_info[0],sys.version_info[1])]  
   
 #==========================================================================  
 #  
 #    boost installation:  
 #  
 if IS_WINDOWS_PLATFORM:  
    boost_libs_path_default=os.path.join(tools_prefix,'boost','lib')  
    boost_libs_default=None  
    for i in os.listdir(boost_libs_path_default):  
       name=os.path.splitext(i)  
       if name[1] == ".dll" and name[0].startswith("boost_python"):  
           if boost_libs_default == None:  
          boost_libs_default= [ name[0] ]  
       else:  
          if not name[0].find("-gd-"): boost_libs_default=[ name[0] ]  
    boost_path_default=os.path.join(tools_prefix,'boost','include','boost-%s'%(boost_libs_default[0].split("-")[-1],))  
 else:  
    boost_path_default=os.path.join(tools_prefix,'include')  
    boost_libs_path_default=os.path.join(tools_prefix,'lib')  
    boost_libs_default=['boost_python']  
 #==========================================================================  
5  #  #
6  #    check if netCDF is installed on the system:  # Primary Business: Queensland, Australia
7  #  # Licensed under the Open Software License version 3.0
8  if IS_WINDOWS_PLATFORM:  # http://www.opensource.org/licenses/osl-3.0.php
9      netcdf_dir=os.path.join(tools_prefix,'netcdf')  #
10      netCDF_path_default=os.path.join(netcdf_dir,'include')  # Development until 2012 by Earth Systems Science Computational Center (ESSCC)
11      netCDF_lib_path_default=os.path.join(netcdf_dir,'lib')  # Development 2012-2013 by School of Earth Sciences
12  else:  # Development from 2014 by Centre for Geoscience Computing (GeoComp)
13      netCDF_path_default=os.path.join(tools_prefix,'include','netcdf-3')  #
14      netCDF_lib_path_default=os.path.join(tools_prefix,'lib','netcdf-3')  ##############################################################################
15    
16  if os.path.isdir(netCDF_path_default) and os.path.isdir(netCDF_lib_path_default):  EnsureSConsVersion(0,98,1)
17       useNetCDF_default='yes'  EnsurePythonVersion(2,5)
18       netCDF_libs_default=[ 'netcdf_c++', 'netcdf' ]  
19  else:  import atexit, sys, os, platform, re
20       useNetCDF_default='no'  from distutils import sysconfig
21       netCDF_path_default=None  from dependencies import *
22       netCDF_lib_path_default=None  from site_init import *
23       netCDF_libs_default=None  
24    # Version number to check for in options file. Increment when new features are
25  if IS_WINDOWS_PLATFORM:  # added or existing options changed.
26          useNetCDF_default='no' # be default netcdf is not supported on windows.  REQUIRED_OPTS_VERSION=201
27  #==========================================================================  
28  #  # MS Windows support, many thanks to PH
29  #    compile:  IS_WINDOWS = (os.name == 'nt')
30  #  
31  if IS_WINDOWS_PLATFORM:  IS_OSX = (os.uname()[0] == 'Darwin')
32      # cc_flags_default  = '/GR /EHsc /MD /Qc99 /Qopenmp /Qopenmp-report1 /O3 /G7 /Qprec /Qpar-report1 /QxP /QaxP'  
33      # cc_flags_debug_default  = '/Od /MDd /RTC1 /GR /EHsc /Qc99 /Qopenmp /Qopenmp-report1 /Qprec'  ########################## Determine options file ############################
34      cc_flags_default  = '/nologo /EHsc /GR  /wd4068 /O2 /Op /MT /W3 /Ob0 /Z7'  # 1. command line
35      cc_flags_debug_default  ='/nologo /EHsc /GR  /wd4068 /Od /RTC1 /MTd /ZI /Ob0 /Z7'  # 2. scons/<hostname>_options.py
36        # 3. name as part of a cluster
37      cc_flags_default  = '/nologo /EHsc /GR  /O2 /MT /W3 /Ob0 /Z7 /wd4068'  options_file=ARGUMENTS.get('options_file', None)
38      cc_flags_debug_default  ='/nologo /EHsc /GR /Od /RTC1 /MTd /W3 /Ob0 /Z7/wd4068'  if not options_file:
39      cxx_flags_default = ''      ext_dir = os.path.join(os.getcwd(), 'scons')
40      cxx_flags_debug_default = ''      hostname = platform.node().split('.')[0]
41      cc_common_flags = '/FD /EHsc /GR /wd4068 '      for name in hostname, effectiveName(hostname):
42  else:          mangledhostname = re.sub('[^0-9a-zA-Z]', '_', hostname)
43     cc_flags_default='-O3 -std=c99 -ffast-math -fpic -Wno-unknown-pragmas -ansi -pedantic-errors'          options_file = os.path.join(ext_dir, mangledhostname+'_options.py')
44     cc_flags_debug_default='-g -O0 -ffast-math -std=c99 -fpic -Wno-unknown-pragmas -ansi -pedantic-errors'          if os.path.isfile(options_file): break
45     cxx_flags_default='--no-warn -ansi'  
46     cxx_flags_debug_default='--no-warn -ansi -DDOASSERT'  if not os.path.isfile(options_file):
47  #==============================================================================================          print("\nWARNING:\nOptions file %s" % options_file)
48  # Default options and options help text      print("not found! Default options will be used which is most likely suboptimal.")
49  # These are defaults and can be overridden using command line arguments or an options file.      print("We recommend that you copy the most relavent options file in the scons/os/")
50  # if the options_file or ARGUMENTS do not exist then the ones listed as default here are used      print("subdirectory and customize it to your needs.\n")
51  # DO NOT CHANGE THEM HERE      options_file = None
52  opts.AddOptions(  
53  # Where to install esys stuff  ############################### Build options ################################
54    ('incinstall', 'where the esys headers will be installed', prefix+'/include'),  
55    ('libinstall', 'where the esys libraries will be installed', prefix+'/lib'),  default_prefix='/usr'
56    ('pyinstall', 'where the esys python modules will be installed', prefix),  mpi_flavours=('no', 'none', 'MPT', 'MPICH', 'MPICH2', 'OPENMPI', 'INTELMPI')
57    ('src_zipfile', 'the source zip file will be installed.', prefix+"/release/escript_src.zip"),  lapack_flavours=('none', 'clapack', 'mkl')
58    ('test_zipfile', 'the test zip file will be installed.', prefix+"/release/escript_tests.zip"),  
59    ('src_tarfile', 'the source tar file will be installed.', prefix+"/release/escript_src.tar.gz"),  vars = Variables(options_file, ARGUMENTS)
60    ('test_tarfile', 'the test tar file will be installed.', prefix+"/release/escript_tests.tar.gz"),  vars.AddVariables(
61    ('examples_tarfile', 'the examples tar file will be installed.', prefix+"/release/doc/escript_examples.tar.gz"),    PathVariable('options_file', 'Path to options file', options_file, PathVariable.PathIsFile),
62    ('examples_zipfile', 'the examples zip file will be installed.', prefix+"/release/doc/escript_examples.zip"),    PathVariable('prefix', 'Installation prefix', Dir('#.').abspath, PathVariable.PathIsDirCreate),
63    ('guide_pdf', 'name of the user guide in pdf format', prefix+"/release/doc/user/guide.pdf"),    PathVariable('build_dir', 'Top-level build directory', Dir('#/build').abspath, PathVariable.PathIsDirCreate),
64    ('api_epydoc', 'name of the epydoc api docs directory',prefix+"/release/doc/epydoc"),    BoolVariable('verbose', 'Output full compile/link lines', False),
65    ('api_doxygen', 'name of the doxygen api docs directory',prefix+"/release/doc/doxygen"),  # Compiler/Linker options
66    ('guide_html', 'name of the directory for user guide in html format', prefix+"/release/doc/user/html"),    ('cxx', 'Path to C++ compiler', 'default'),
67  # Compilation options    ('cc_flags', 'Base C++ compiler flags', 'default'),
68    BoolOption('dodebug', 'Do you want a debug build?', 'no'),    ('cc_optim', 'Additional C++ flags for a non-debug build', 'default'),
69    ('options_file', "Optional file containing preferred options. Ignored if it doesn't exist (default: scons/<hostname>_options.py)", options_file),    ('cc_debug', 'Additional C++ flags for a debug build', 'default'),
70    ('cc_defines','C/C++ defines to use', None),    ('cxx_extra', 'Extra C++ compiler flags', ''),
71    ('cc_flags','C compiler flags to use (Release build)', cc_flags_default),    ('ld_extra', 'Extra linker flags', ''),
72    ('cc_flags_debug', 'C compiler flags to use (Debug build)', cc_flags_debug_default),    BoolVariable('werror','Treat compiler warnings as errors', True),
73    ('cxx_flags', 'C++ compiler flags to use (Release build)', cxx_flags_default),    BoolVariable('debug', 'Compile with debug flags', False),
74    ('cxx_flags_debug', 'C++ compiler flags to use (Debug build)', cxx_flags_debug_default),    BoolVariable('openmp', 'Compile parallel version using OpenMP', False),
75    ('ar_flags', 'Static library archiver flags to use', None),    ('omp_flags', 'OpenMP compiler flags', 'default'),
76    ('sys_libs', 'System libraries to link with', None),    ('omp_ldflags', 'OpenMP linker flags', 'default'),
77    ('tar_flags','flags for zip files','-c -z'),  # Mandatory libraries
78  # MKL    ('boost_prefix', 'Prefix/Paths of boost installation', default_prefix),
79    PathOption('mkl_path', 'Path to MKL includes', None),    ('boost_libs', 'Boost libraries to link with', ['boost_python-mt']),
80    PathOption('mkl_lib_path', 'Path to MKL libs', None),  # Mandatory for tests
81    ('mkl_libs', 'MKL libraries to link with', None),    ('cppunit_prefix', 'Prefix/Paths of CppUnit installation', default_prefix),
82  # SCSL    ('cppunit_libs', 'CppUnit libraries to link with', ['cppunit']),
83    PathOption('scsl_path', 'Path to SCSL includes', None),  # Optional libraries and options
84    PathOption('scsl_lib_path', 'Path to SCSL libs', None),    EnumVariable('mpi', 'Compile parallel version using MPI flavour', 'none', allowed_values=mpi_flavours),
85    ('scsl_libs', 'SCSL libraries to link with', None),    ('mpi_prefix', 'Prefix/Paths of MPI installation', default_prefix),
86    ('scsl_libs_MPI', 'SCSL libraries to link with for MPI build', None),    ('mpi_libs', 'MPI shared libraries to link with', ['mpi']),
87  # UMFPACK    BoolVariable('netcdf', 'Enable netCDF file support', False),
88    PathOption('ufc_path', 'Path to UFconfig includes', ufc_path_default),    ('netcdf_prefix', 'Prefix/Paths of netCDF installation', default_prefix),
89    PathOption('umf_path', 'Path to UMFPACK includes', umf_path_default),    ('netcdf_libs', 'netCDF libraries to link with', ['netcdf_c++', 'netcdf']),
90    PathOption('umf_lib_path', 'Path to UMFPACK libs', umf_lib_path_default),    BoolVariable('parmetis', 'Enable ParMETIS (requires MPI)', False),
91    ('umf_libs', 'UMFPACK libraries to link with', umf_libs_default),    ('parmetis_prefix', 'Prefix/Paths of ParMETIS installation', default_prefix),
92  # AMD (used by UMFPACK)    ('parmetis_libs', 'ParMETIS libraries to link with', ['parmetis', 'metis']),
93    PathOption('amd_path', 'Path to AMD includes', amd_path_default),    BoolVariable('papi', 'Enable PAPI', False),
94    PathOption('amd_lib_path', 'Path to AMD libs', amd_lib_path_default),    ('papi_prefix', 'Prefix/Paths to PAPI installation', default_prefix),
95    ('amd_libs', 'AMD libraries to link with', amd_libs_default),    ('papi_libs', 'PAPI libraries to link with', ['papi']),
96  # BLAS    BoolVariable('papi_instrument_solver', 'Use PAPI to instrument each iteration of the solver', False),
97    PathOption('blas_path', 'Path to BLAS includes', None),    BoolVariable('mkl', 'Enable the Math Kernel Library', False),
98    PathOption('blas_lib_path', 'Path to BLAS libs', None),    ('mkl_prefix', 'Prefix/Paths to MKL installation', default_prefix),
99    ('blas_libs', 'BLAS libraries to link with', None),    ('mkl_libs', 'MKL libraries to link with', ['mkl_solver','mkl_em64t','guide','pthread']),
100  # netCDF    BoolVariable('umfpack', 'Enable UMFPACK', False),
101    ('useNetCDF', 'switch on/off the usage of netCDF', useNetCDF_default),    ('umfpack_prefix', 'Prefix/Paths to UMFPACK installation', default_prefix),
102    PathOption('netCDF_path', 'Path to netCDF includes', netCDF_path_default),    ('umfpack_libs', 'UMFPACK libraries to link with', ['umfpack']),
103    PathOption('netCDF_lib_path', 'Path to netCDF libs', netCDF_lib_path_default),    BoolVariable('boomeramg', 'Enable BoomerAMG', False),
104    ('netCDF_libs', 'netCDF C++ libraries to link with', netCDF_libs_default),    ('boomeramg_prefix', 'Prefix/Paths to BoomerAMG installation', default_prefix),
105  # Python    ('boomeramg_libs', 'BoomerAMG libraries to link with', ['boomeramg']),
106  # locations of include files for python    EnumVariable('lapack', 'Set LAPACK flavour', 'none', allowed_values=lapack_flavours),
107    PathOption('python_path', 'Path to Python includes', python_path_default),    ('lapack_prefix', 'Prefix/Paths to LAPACK installation', default_prefix),
108    PathOption('python_lib_path', 'Path to Python libs', python_lib_path_default),    ('lapack_libs', 'LAPACK libraries to link with', []),
109    ('python_libs', 'Python libraries to link with', python_libs_default),    BoolVariable('silo', 'Enable the Silo file format in weipa', False),
110  # Boost    ('silo_prefix', 'Prefix/Paths to Silo installation', default_prefix),
111    PathOption('boost_path', 'Path to Boost includes', boost_path_default),    ('silo_libs', 'Silo libraries to link with', ['siloh5', 'hdf5']),
112    PathOption('boost_libs_path', 'Path to Boost libs', boost_libs_path_default),    BoolVariable('visit', 'Enable the VisIt simulation interface', False),
113    ('boost_libs', 'Boost libraries to link with', boost_libs_default),    ('visit_prefix', 'Prefix/Paths to VisIt installation', default_prefix),
114  # Doc building    ('visit_libs', 'VisIt libraries to link with', ['simV2']),
115    PathOption('doxygen_path', 'Path to Doxygen executable', None),    BoolVariable('vsl_random', 'Use VSL from intel for random data', False),
116  #  PathOption('epydoc_path', 'Path to Epydoc executable', None),  # Advanced settings
117  # PAPI    #dudley_assemble_flags = -funroll-loops      to actually do something
118    PathOption('papi_path', 'Path to PAPI includes', None),    ('dudley_assemble_flags', 'compiler flags for some dudley optimisations', ''),
119    PathOption('papi_lib_path', 'Path to PAPI libs', None),    # To enable passing function pointers through python
120    ('papi_libs', 'PAPI libraries to link with', None),    BoolVariable('iknowwhatimdoing', 'Allow non-standard C', False),
121  # MPI    # An option for specifying the compiler tools (see windows branch)
122    BoolOption('useMPI', 'Compile parallel version using MPI', 'no'),    ('tools_names', 'Compiler tools to use', ['default']),
123      ('env_export', 'Environment variables to be passed to tools',[]),
124      EnumVariable('forcelazy', 'For testing use only - set the default value for autolazy', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
125      EnumVariable('forcecollres', 'For testing use only - set the default value for force resolving collective ops', 'leave_alone', allowed_values=('leave_alone', 'on', 'off')),
126      # finer control over library building, intel aggressive global optimisation
127      # works with dynamic libraries on windows.
128      ('build_shared', 'Build dynamic libraries only', False),
129      ('sys_libs', 'Extra libraries to link with', []),
130      ('escript_opts_version', 'Version of options file (do not specify on command line)'),
131      ('SVN_VERSION', 'Do not use from options file', -2),
132      ('pythoncmd', 'which python to compile with','python'),
133      ('usepython3', 'Is this a python3 build? (experimental)', False),
134      ('pythonlibname', 'Name of the python library to link. (This is found automatically for python2.X.)', ''),
135      ('pythonlibpath', 'Path to the python library. (You should not need to set this unless your python has moved)',''),
136      ('pythonincpath','Path to python include files. (You should not need to set this unless your python has moved',''),
137      BoolVariable('BADPYTHONMACROS','Extra \#include to get around a python bug.', True),
138      BoolVariable('compressed_files','Enables reading from compressed binary files', True),
139      ('compression_libs', 'Compression libraries to link with', ['boost_iostreams'])
140  )  )
 #=================================================================================================  
 #  
 #   Note: On the Altix the intel compilers are not automatically  
 #   detected by scons intelc.py script. The Altix has a different directory  
 #   path and in some locations the "modules" facility is used to support  
 #   multiple compiler versions. This forces the need to import the users PATH  
 #   environment which isn't the "scons way"  
 #   This doesn't impact linux and windows which will use the default compiler (g++ or msvc, or the intel compiler if it is installed on both platforms)  
 #   FIXME: Perhaps a modification to intelc.py will allow better support for ia64 on altix  
 #  
 if IS_WINDOWS_PLATFORM:  
       env = Environment(tools = ['default', 'msvc'], options = opts)  
 else:  
    if os.uname()[4]=='ia64':  
       env = Environment(tools = ['default', 'intelc'], options = opts)  
       if env['CXX'] == 'icpc':  
          env['LINK'] = env['CXX'] # version >=9 of intel c++ compiler requires use of icpc to link in C++ runtimes (icc does not). FIXME: this behaviour could be directly incorporated into scons intelc.py  
    else:  
       env = Environment(tools = ['default'], options = opts)  
 Help(opts.GenerateHelpText(env))  
 #=================================================================================================  
 #  
 #     Initialise Scons Build Environment  
 #     check for user environment variables we are interested in  
 try:  
    python_path = os.environ['PYTHONPATH']  
    env['ENV']['PYTHONPATH'] = python_path  
 except KeyError:  
    python_path = ''  
141    
142  try:  ##################### Create environment and help text #######################
    omp_num_threads = os.environ['OMP_NUM_THREADS']  
 except KeyError:  
    omp_num_threads = 1  
 env['ENV']['OMP_NUM_THREADS'] = omp_num_threads  
143    
144  try:  # Intel's compiler uses regular expressions improperly and emits a warning
145     env['ENV']['DISPLAY'] = os.environ['DISPLAY']  # about failing to find the compilers. This warning can be safely ignored.
    env['ENV']['XAUTHORITY'] = os.environ['XAUTHORITY']  
 except KeyError:  
    pass  
146    
147  try:  # PATH is needed so the compiler, linker and tools are found if they are not
148     path = os.environ['PATH']  # in default locations.
149     env['ENV']['PATH'] = path  env = Environment(tools = ['default'], options = vars,
150  except KeyError:                    ENV = {'PATH': os.environ['PATH']})
151     path = ''  
152  try:  # set the vars for clang
153     ld_library_path = os.environ['LD_LIBRARY_PATH']  def mkclang(env):
154     env['ENV']['LD_LIBRARY_PATH'] = ld_library_path      env['CXX']='clang++'
155  except KeyError:  
156     ld_library_path = ''  if env['tools_names'] != ['default']:
157  #==========================================================================      zz=env['tools_names']
158  #      if 'clang' in zz:
159  #    Add some customer builders          zz.remove('clang')
160  #          zz.insert(0, mkclang)
161  py_builder = Builder(action = scons_extensions.build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)      env = Environment(tools = ['default'] + env['tools_names'], options = vars,
162  env.Append(BUILDERS = {'PyCompile' : py_builder});                        ENV = {'PATH' : os.environ['PATH']})
163    
164  if IS_WINDOWS_PLATFORM:  if options_file:
165     runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', src_suffix='.exe', single_source=True)      opts_valid=False
166        if 'escript_opts_version' in env.Dictionary() and \
167            int(env['escript_opts_version']) >= REQUIRED_OPTS_VERSION:
168                opts_valid=True
169        if opts_valid:
170            print("Using options in %s." % options_file)
171        else:
172            print("\nOptions file %s" % options_file)
173            print("is outdated! Please update the file by examining one of the TEMPLATE")
174            print("files in the scons/ subdirectory and setting escript_opts_version to %d.\n"%REQUIRED_OPTS_VERSION)
175            Exit(1)
176    
177    # Generate help text (scons -h)
178    Help(vars.GenerateHelpText(env))
179    
180    # Check for superfluous options
181    if len(vars.UnknownVariables())>0:
182        for k in vars.UnknownVariables():
183            print("Unknown option '%s'" % k)
184        Exit(1)
185    
186    # create dictionary which will be populated with info for buildvars file
187    env['buildvars']={}
188    # create list which will be populated with warnings if there are any
189    env['warnings']=[]
190    
191    #################### Make sure install directories exist #####################
192    
193    env['BUILD_DIR']=Dir(env['build_dir']).abspath
194    prefix=Dir(env['prefix']).abspath
195    env['buildvars']['prefix']=prefix
196    env['incinstall'] = os.path.join(prefix, 'include')
197    env['bininstall'] = os.path.join(prefix, 'bin')
198    env['libinstall'] = os.path.join(prefix, 'lib')
199    env['pyinstall']  = os.path.join(prefix, 'esys')
200    if not os.path.isdir(env['bininstall']):
201        os.makedirs(env['bininstall'])
202    if not os.path.isdir(env['libinstall']):
203        os.makedirs(env['libinstall'])
204    if not os.path.isdir(env['pyinstall']):
205        os.makedirs(env['pyinstall'])
206    
207    env.Append(CPPPATH = [env['incinstall']])
208    env.Append(LIBPATH = [env['libinstall']])
209    
210    ################# Fill in compiler options if not set above ##################
211    
212    if env['cxx'] != 'default': env['CXX']=env['cxx']
213    
214    # version >=9 of intel C++ compiler requires use of icpc to link in C++
215    # runtimes (icc does not)
216    if not IS_WINDOWS and os.uname()[4]=='ia64' and env['CXX']=='icpc':
217        env['LINK'] = env['CXX']
218    
219    # default compiler/linker options
220    cc_flags = ''
221    cc_optim = ''
222    cc_debug = ''
223    omp_flags = ''
224    omp_ldflags = ''
225    fatalwarning = '' # switch to turn warnings into errors
226    sysheaderopt = '' # how to indicate that a header is a system header
227    
228    # env['CC'] might be a full path
229    cc_name=os.path.basename(env['CXX'])
230    
231    if cc_name == 'icpc':
232        # Intel compiler
233        # #1875: offsetof applied to non-POD types is nonstandard (in boost)
234        # removed -std=c99 because icpc doesn't like it and we aren't using c anymore
235        cc_flags    = "-fPIC -w2 -wd1875 -Wno-unknown-pragmas"
236        cc_optim    = "-O3 -ftz -fno-alias -inline-level=2 -ipo -xHost"
237        cc_debug    = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK"
238        omp_flags   = "-openmp"
239        omp_ldflags = "-openmp -openmp_report=1"
240        fatalwarning = "-Werror"
241    elif cc_name[:3] == 'g++':
242        # GNU C on any system
243        # note that -ffast-math is not used because it breaks isnan(),
244        # see mantis #691
245        cc_flags     = "-pedantic -Wall -fPIC -Wno-unknown-pragmas -Wno-sign-compare -Wno-system-headers -Wno-long-long -Wno-strict-aliasing -finline-functions"
246        cc_optim     = "-O3"
247        cc_debug     = "-g -O0 -DDOASSERT -DDOPROF -DBOUNDS_CHECK --param=max-vartrack-size=90000000" #avoids vartrack limit being exceeded with escriptcpp.cpp
248        omp_flags    = "-fopenmp"
249        omp_ldflags  = "-fopenmp"
250        fatalwarning = "-Werror"
251        sysheaderopt = "-isystem"
252    elif cc_name == 'cl':
253        # Microsoft Visual C on Windows
254        cc_flags     = "/EHsc /MD /GR /wd4068 /D_USE_MATH_DEFINES /DDLL_NETCDF"
255        cc_optim     = "/O2 /Op /W3"
256        cc_debug     = "/Od /RTCcsu /ZI /DBOUNDS_CHECK"
257        fatalwarning = "/WX"
258    elif cc_name == 'icl':
259        # Intel C on Windows
260        cc_flags     = '/EHsc /GR /MD'
261        cc_optim     = '/fast /Oi /W3 /Qssp /Qinline-factor- /Qinline-min-size=0 /Qunroll'
262        cc_debug     = '/Od /RTCcsu /Zi /Y- /debug:all /Qtrapuv'
263        omp_flags    = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
264        omp_ldflags  = '/Qvec-report0 /Qopenmp /Qopenmp-report0 /Qparallel'
265    
266    env['sysheaderopt']=sysheaderopt
267    
268    # set defaults if not otherwise specified
269    if env['cc_flags']    == 'default': env['cc_flags'] = cc_flags
270    if env['cc_optim']    == 'default': env['cc_optim'] = cc_optim
271    if env['cc_debug']    == 'default': env['cc_debug'] = cc_debug
272    if env['omp_flags']   == 'default': env['omp_flags'] = omp_flags
273    if env['omp_ldflags'] == 'default': env['omp_ldflags'] = omp_ldflags
274    if env['cxx_extra'] != '': env.Append(CXXFLAGS = env['cxx_extra'])
275    if env['ld_extra']  != '': env.Append(LINKFLAGS = env['ld_extra'])
276    
277    if env['BADPYTHONMACROS']: env.Append(CXXFLAGS = ' -DBADPYTHONMACROS')
278    
279    if env['usepython3']:
280        env.Append(CPPDEFINES=['ESPYTHON3'])
281    
282    # set up the autolazy values
283    if env['forcelazy'] == 'on':
284        env.Append(CPPDEFINES=['FAUTOLAZYON'])
285    elif env['forcelazy'] == 'off':
286        env.Append(CPPDEFINES=['FAUTOLAZYOFF'])
287    
288    # set up the collective resolve values
289    if env['forcecollres'] == 'on':
290        env.Append(CPPDEFINES=['FRESCOLLECTON'])
291    elif env['forcecollres'] == 'off':
292        env.Append(CPPDEFINES=['FRESCOLLECTOFF'])
293    
294    # allow non-standard C if requested
295    if env['iknowwhatimdoing']:
296        env.Append(CPPDEFINES=['IKNOWWHATIMDOING'])
297    
298    # Disable OpenMP if no flags provided
299    if env['openmp'] and env['omp_flags'] == '':
300       env['warnings'].append("OpenMP requested but no flags provided - disabling OpenMP!")
301       env['openmp'] = False
302    
303    if env['openmp']:
304        env.Append(CCFLAGS = env['omp_flags'])
305        if env['omp_ldflags'] != '': env.Append(LINKFLAGS = env['omp_ldflags'])
306    else:
307        env['omp_flags']=''
308        env['omp_ldflags']=''
309    
310    env['buildvars']['openmp']=int(env['openmp'])
311    
312    # add debug/non-debug compiler flags
313    env['buildvars']['debug']=int(env['debug'])
314    if env['debug']:
315        env.Append(CCFLAGS = env['cc_debug'])
316    else:
317        env.Append(CCFLAGS = env['cc_optim'])
318    
319    # always add cc_flags
320    env.Append(CCFLAGS = env['cc_flags'])
321    
322    # add system libraries
323    env.AppendUnique(LIBS = env['sys_libs'])
324    
325    # determine svn revision
326    global_revision=ARGUMENTS.get('SVN_VERSION', None)
327    if global_revision:
328        global_revision = re.sub(':.*', '', global_revision)
329        global_revision = re.sub('[^0-9]', '', global_revision)
330        if global_revision == '': global_revision='-2'
331  else:  else:
332     runUnitTest_builder = Builder(action = scons_extensions.runUnitTest, suffix = '.passed', single_source=True)    # Get the global Subversion revision number for the getVersion() method
333  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});    try:
334        global_revision = os.popen('svnversion -n .').read()
335        global_revision = re.sub(':.*', '', global_revision)
336        global_revision = re.sub('[^0-9]', '', global_revision)
337        if global_revision == '': global_revision='-2'
338      except:
339        global_revision = '-1'
340    env['svn_revision']=global_revision
341    env['buildvars']['svn_revision']=global_revision
342    env.Append(CPPDEFINES=['SVN_VERSION='+global_revision])
343    
344    if IS_WINDOWS:
345        if not env['build_shared']:
346            env.Append(CPPDEFINES = ['ESYSUTILS_STATIC_LIB'])
347            env.Append(CPPDEFINES = ['PASO_STATIC_LIB'])
348    
349    # VSL random numbers
350    env['buildvars']['vsl_random']=int(env['vsl_random'])
351    if env['vsl_random']:
352        env.Append(CPPDEFINES = ['MKLRANDOM'])
353    
354    env['IS_WINDOWS']=IS_WINDOWS
355    
356    ###################### Copy required environment vars ########################
357    
358    # Windows doesn't use LD_LIBRARY_PATH but PATH instead
359    if IS_WINDOWS:
360        LD_LIBRARY_PATH_KEY='PATH'
361        env['ENV']['LD_LIBRARY_PATH']=''
362    else:
363        LD_LIBRARY_PATH_KEY='LD_LIBRARY_PATH'
364    
365  runPyUnitTest_builder = Builder(action = scons_extensions.runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)  env['LD_LIBRARY_PATH_KEY']=LD_LIBRARY_PATH_KEY
 env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});  
366    
367  # Convert the options which are held in environment variable into python variables for ease of handling and configure compilation options  # the following env variables are exported for the unit tests
 try:  
    incinstall = env['incinstall']  
    env.Append(CPPPATH = [incinstall,])  
 except KeyError:  
    incinstall = None  
 try:  
    libinstall = env['libinstall']  
    env.Append(LIBPATH = [libinstall,]) # Adds -L for building of libescript.so libfinley.so escriptcpp.so finleycpp.so  
    env.PrependENVPath('LD_LIBRARY_PATH', libinstall)  
    if env['PLATFORM'] == "win32":  
       env.PrependENVPath('PATH', libinstall)  
       env.PrependENVPath('PATH', env['boost_libs_path'])  
 except KeyError:  
    libinstall = None  
 try:  
    pyinstall = env['pyinstall']+'/esys' # all targets will install into pyinstall/esys but PYTHONPATH points at straight pyinstall so you go import esys.escript etc  
    env.PrependENVPath('PYTHONPATH', env['pyinstall'])  
 except KeyError:  
    pyinstall = None  
 try:  
    dodebug = env['dodebug']  
 except KeyError:  
    dodebug = None  
 try:  
    useMPI = env['useMPI']  
 except KeyError:  
    useMPI = None  
 try:  
    cc_defines = env['cc_defines']  
    env.Append(CPPDEFINES = cc_defines)  
 except KeyError:  
    pass  
368    
369  if dodebug:  for key in 'OMP_NUM_THREADS', 'ESCRIPT_NUM_PROCS', 'ESCRIPT_NUM_NODES':
   if useMPI:  
370      try:      try:
371        flags = env['cc_flags_debug_MPI']          env['ENV'][key] = os.environ[key]
       env.Append(CCFLAGS = flags)  
372      except KeyError:      except KeyError:
373        pass          env['ENV'][key] = '1'
374    else:  
375    env_export=env['env_export']
376    env_export.extend(['ESCRIPT_NUM_THREADS','ESCRIPT_HOSTFILE','DISPLAY','XAUTHORITY','PATH','HOME','KMP_MONITOR_STACKSIZE','TMPDIR','TEMP','TMP','LD_PRELOAD'])
377    
378    for key in set(env_export):
379      try:      try:
380        flags = env['cc_flags_debug']          env['ENV'][key] = os.environ[key]
       env.Append(CCFLAGS = flags)  
381      except KeyError:      except KeyError:
       pass  
 else:  
   if useMPI:  
    try:  
      flags = env['cc_flags_MPI']  
      env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
   else:  
    try:  
       flags = env['cc_flags']  
       env.Append(CCFLAGS = flags)  
    except KeyError:  
       pass  
 if dodebug:  
    if useMPI:  
      try:  
         flags = env['cxx_flags_debug_MPI']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
    else:  
      try:  
         flags = env['cxx_flags_debug']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
382          pass          pass
 else:  
    if useMPI:  
      try:  
         flags = env['cxx_flags_MPI']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
    else:  
      try:  
         flags = env['cxx_flags']  
         env.Append(CXXFLAGS = flags)  
      except KeyError:  
         pass  
 try:  
    flags = env['ar_flags']  
    env.Append(ARFLAGS = flags)  
 except KeyError:  
    ar_flags = None  
 try:  
    sys_libs = env['sys_libs']  
 except KeyError:  
    sys_libs = []  
   
 try:  
    tar_flags = env['tar_flags']  
    env.Replace(TARFLAGS = tar_flags)  
 except KeyError:  
    pass  
   
 try:  
    includes = env['mkl_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
   
 try:  
    lib_path = env['mkl_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
   
 if useMPI:  
    mkl_libs = []  
 else:  
    try:  
       mkl_libs = env['mkl_libs']  
    except KeyError:  
       mkl_libs = []  
   
 try:  
    includes = env['scsl_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
383    
384  try:  try:
385     lib_path = env['scsl_lib_path']      env.PrependENVPath(LD_LIBRARY_PATH_KEY, os.environ[LD_LIBRARY_PATH_KEY])
    env.Append(LIBPATH = [lib_path,])  
386  except KeyError:  except KeyError:
387     pass      pass
388    
389  if useMPI:  if IS_OSX:
390    try:    try:
391      scsl_libs = env['scsl_libs_MPI']      env.PrependENVPath('DYLD_LIBRARY_PATH', os.environ['DYLD_LIBRARY_PATH'])
392    except KeyError:    except KeyError:
393      scsl_libs = []      pass
 else:  
   try:  
     scsl_libs = env['scsl_libs']  
   except KeyError:  
     scsl_libs = []  
394    
 try:  
    includes = env['umf_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
395    
396  try:  # these shouldn't be needed
397     lib_path = env['umf_lib_path']  #for key in 'C_INCLUDE_PATH','CPLUS_INCLUDE_PATH','LIBRARY_PATH':
398     env.Append(LIBPATH = [lib_path,])  #    try:
399  except KeyError:  #        env['ENV'][key] = os.environ[key]
400     pass  #    except KeyError:
401    #        pass
 if useMPI:  
     umf_libs = []  
 else:  
    try:  
       umf_libs = env['umf_libs']  
    except KeyError:  
       umf_libs = []  
   
 try:  
    includes = env['ufc_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
402    
403  try:  try:
404     includes = env['amd_path']      env['ENV']['PYTHONPATH'] = os.environ['PYTHONPATH']
    env.Append(CPPPATH = [includes,])  
405  except KeyError:  except KeyError:
406     pass      pass
407    
408  try:  ######################## Add some custom builders ############################
    lib_path = env['amd_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
409    
410  if useMPI:  if env['pythoncmd']=='python':
411      amd_libs = []      py_builder = Builder(action = build_py, suffix = '.pyc', src_suffix = '.py', single_source=True)
412  else:  else:
413     try:      py_builder = Builder(action = env['pythoncmd']+" scripts/py_comp.py $SOURCE $TARGET", suffix = '.pyc', src_suffix = '.py', single_source=True)
414        amd_libs = env['amd_libs']  env.Append(BUILDERS = {'PyCompile' : py_builder});
    except KeyError:  
       amd_libs = []  
   
 try:  
    includes = env['blas_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
   
 try:  
    lib_path = env['blas_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
   
 try:  
    blas_libs = env['blas_libs']  
 except KeyError:  
    blas_libs = []  
   
 try:  
    useNetCDF = env['useNetCDF']  
 except KeyError:  
    useNetCDF = 'yes'  
    pass  
   
 if not useNetCDF == 'yes':  
    print "Warning: Installation is not configured with netCDF. Some I/O function may not be available."  
     
 if useNetCDF == 'yes':  
    try:  
       includes = env['netCDF_path']  
       env.Append(CPPPATH = [includes,])  
    except KeyError:  
       pass  
   
    try:  
       lib_path = env['netCDF_lib_path']  
       if IS_WINDOWS_PLATFORM: env['ENV']['PATH']+=";"+lib_path  
       env.Append(LIBPATH = [ lib_path, ])  
    except KeyError:  
       pass  
   
    try:  
       netCDF_libs = env['netCDF_libs']  
    except KeyError:  
       netCDF_libs = [ ]  
 else:  
    netCDF_libs=[ ]  
415    
416  try:  runUnitTest_builder = Builder(action = runUnitTest, suffix = '.passed', src_suffix=env['PROGSUFFIX'], single_source=True)
417     includes = env['boost_path']  env.Append(BUILDERS = {'RunUnitTest' : runUnitTest_builder});
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['boost_libs_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    boost_libs = env['boost_libs']  
 except KeyError:  
    boost_libs = None  
 try:  
    includes = env['python_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['python_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    python_libs = env['python_libs']  
 except KeyError:  
    python_libs = None  
 try:  
    doxygen_path = env['doxygen_path']  
 except KeyError:  
    doxygen_path = None  
 try:  
    epydoc_path = env['epydoc_path']  
 except KeyError:  
    epydoc_path = None  
 try:  
    includes = env['papi_path']  
    env.Append(CPPPATH = [includes,])  
 except KeyError:  
    pass  
 try:  
    lib_path = env['papi_lib_path']  
    env.Append(LIBPATH = [lib_path,])  
 except KeyError:  
    pass  
 try:  
    papi_libs = env['papi_libs']  
 except KeyError:  
    papi_libs = None  
418    
419    runPyUnitTest_builder = Builder(action = runPyUnitTest, suffix = '.passed', src_suffic='.py', single_source=True)
420    env.Append(BUILDERS = {'RunPyUnitTest' : runPyUnitTest_builder});
421    
422  try:  runPyExample_builder = Builder(action = runPyExample, suffix = '.passed', src_suffic='.py', single_source=True)
423     src_zipfile = env.File(env['src_zipfile'])  env.Append(BUILDERS = {'RunPyExample' : runPyExample_builder});
 except KeyError:  
    src_zipfile = None  
 try:  
    test_zipfile = env.File(env['test_zipfile'])  
 except KeyError:  
    test_zipfile = None  
 try:  
    examples_zipfile = env.File(env['examples_zipfile'])  
 except KeyError:  
    examples_zipfile = None  
424    
425  try:  epstopdfbuilder = Builder(action = eps2pdf, suffix='.pdf', src_suffix='.eps', single_source=True)
426     src_tarfile = env.File(env['src_tarfile'])  env.Append(BUILDERS = {'EpsToPDF' : epstopdfbuilder});
 except KeyError:  
    src_tarfile = None  
 try:  
    test_tarfile = env.File(env['test_tarfile'])  
 except KeyError:  
    test_tarfile = None  
 try:  
    examples_tarfile = env.File(env['examples_tarfile'])  
 except KeyError:  
    examples_tarfile = None  
427    
428  try:  ############################ Dependency checks ###############################
    guide_pdf = env.File(env['guide_pdf'])  
 except KeyError:  
    guide_pdf = None  
429    
430  try:  ######## Compiler
431     guide_html_index = env.File('index.htm',env['guide_html'])  env=checkCompiler(env)
432  except KeyError:  
433     guide_html_index = None  ######## Python headers & library (required)
434    env=checkPython(env)
435    
436    ######## boost & boost-python (required)
437    env=checkBoost(env)
438    
439    ######## numpy (required) and numpy headers (optional)
440    env=checkNumpy(env)
441    
442    ######## CppUnit (required for tests)
443    env=checkCppUnit(env)
444    
445    ######## optional python modules (sympy, pyproj)
446    env=checkOptionalModules(env)
447    
448    ######## optional dependencies (netCDF, PAPI, MKL, UMFPACK, Lapack, Silo, ...)
449    env=checkOptionalLibraries(env)
450    
451    ######## PDFLaTeX (for documentation)
452    env=checkPDFLatex(env)
453    
454    # keep some of our install paths first in the list for the unit tests
455    env.PrependENVPath(LD_LIBRARY_PATH_KEY, env['libinstall'])
456    env.PrependENVPath('PYTHONPATH', prefix)
457    env['ENV']['ESCRIPT_ROOT'] = prefix
458    
459    if not env['verbose']:
460        env['CXXCOMSTR'] = "Compiling $TARGET"
461        env['SHCXXCOMSTR'] = "Compiling $TARGET"
462        env['ARCOMSTR'] = "Linking $TARGET"
463        env['LINKCOMSTR'] = "Linking $TARGET"
464        env['SHLINKCOMSTR'] = "Linking $TARGET"
465        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
466        env['BIBTEXCOMSTR'] = "Generating bibliography $TARGET"
467        env['MAKEINDEXCOMSTR'] = "Generating index $TARGET"
468        env['PDFLATEXCOMSTR'] = "Building $TARGET from LaTeX input $SOURCES"
469        #Progress(['Checking -\r', 'Checking \\\r', 'Checking |\r', 'Checking /\r'], interval=17)
470    
471    ####################### Configure the subdirectories #########################
472    
473    # remove obsolete files
474    if not env['usempi']:
475        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPI')))
476        Execute(Delete(os.path.join(env['libinstall'], 'pythonMPIredirect')))
477    
478    from grouptest import *
479    TestGroups=[]
480    
481    # keep an environment without warnings-as-errors
482    dodgy_env=env.Clone()
483    
484    # now add warnings-as-errors flags. This needs to be done after configuration
485    # because the scons test files have warnings in them
486    if ((fatalwarning != '') and (env['werror'])):
487        env.Append(CCFLAGS = fatalwarning)
488    
489    Export(
490      ['env',
491       'dodgy_env',
492       'IS_WINDOWS',
493       'TestGroups'
494      ]
495    )
496    
497  try:  env.SConscript(dirs = ['tools/escriptconvert'], variant_dir='$BUILD_DIR/$PLATFORM/tools/escriptconvert', duplicate=0)
498     api_epydoc = env.Dir(env['api_epydoc'])  env.SConscript(dirs = ['paso/src'], variant_dir='$BUILD_DIR/$PLATFORM/paso', duplicate=0)
499  except KeyError:  env.SConscript(dirs = ['weipa/src'], variant_dir='$BUILD_DIR/$PLATFORM/weipa', duplicate=0)
500     api_epydoc = None  env.SConscript(dirs = ['escript/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/escript', duplicate=0)
501    
502    #This will pull in the escriptcore/py_src and escriptcore/test
503    env.SConscript(dirs = ['escriptcore/src'], variant_dir='$BUILD_DIR/$PLATFORM/escriptcore', duplicate=0)
504    #env.SConscript(dirs = ['escript/test'], variant_dir='$BUILD_DIR/$PLATFORM/escript/test', duplicate=0)
505    env.SConscript(dirs = ['esysUtils/src'], variant_dir='$BUILD_DIR/$PLATFORM/esysUtils', duplicate=0)
506    env.SConscript(dirs = ['pasowrap/src'], variant_dir='$BUILD_DIR/$PLATFORM/pasowrap', duplicate=0)
507    env.SConscript(dirs = ['dudley/src'], variant_dir='$BUILD_DIR/$PLATFORM/dudley', duplicate=0)
508    env.SConscript(dirs = ['finley/src'], variant_dir='$BUILD_DIR/$PLATFORM/finley', duplicate=0)
509    env.SConscript(dirs = ['ripley/src'], variant_dir='$BUILD_DIR/$PLATFORM/ripley', duplicate=0)
510    env.SConscript(dirs = ['speckley/src'], variant_dir='$BUILD_DIR/$PLATFORM/speckley', duplicate=0)
511    env.SConscript(dirs = ['downunder/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/downunder', duplicate=0)
512    env.SConscript(dirs = ['modellib/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/modellib', duplicate=0)
513    env.SConscript(dirs = ['pycad/py_src'], variant_dir='$BUILD_DIR/$PLATFORM/pycad', duplicate=0)
514    env.SConscript(dirs = ['pythonMPI/src'], variant_dir='$BUILD_DIR/$PLATFORM/pythonMPI', duplicate=0)
515    env.SConscript(dirs = ['doc'], variant_dir='$BUILD_DIR/$PLATFORM/doc', duplicate=0)
516    env.SConscript(dirs = ['paso/profiling'], variant_dir='$BUILD_DIR/$PLATFORM/paso/profiling', duplicate=0)
517    
518    
519    ######################## Populate the buildvars file #########################
520    
521    write_buildvars(env)
522    
523    ################### Targets to build and install libraries ###################
524    
525    target_init = env.Command(os.path.join(env['pyinstall'],'__init__.py'), None, Touch('$TARGET'))
526    env.Alias('target_init', [target_init])
527    # delete buildvars upon cleanup
528    env.Clean('target_init', os.path.join(env['libinstall'], 'buildvars'))
529    
530    # The headers have to be installed prior to build in order to satisfy
531    # #include <paso/Common.h>
532    env.Alias('build_esysUtils', ['install_esysUtils_headers', 'build_esysUtils_lib'])
533    env.Alias('install_esysUtils', ['build_esysUtils', 'install_esysUtils_lib'])
534    
535    env.Alias('build_paso', ['install_paso_headers', 'build_paso_lib'])
536    env.Alias('install_paso', ['build_paso', 'install_paso_lib'])
537    
538    env.Alias('build_escript', ['install_escript_headers', 'build_escript_lib', 'build_escriptcpp_lib'])
539    env.Alias('install_escript', ['build_escript', 'install_escript_lib', 'install_escriptcpp_lib', 'install_escriptcore_py', 'install_escript_py'])
540    
541    env.Alias('build_pasowrap', ['install_pasowrap_headers', 'build_pasowrap_lib', 'build_pasowrapcpp_lib'])
542    env.Alias('install_pasowrap', ['build_pasowrap', 'install_pasowrap_lib', 'install_pasowrapcpp_lib', 'install_pasowrap_py'])
543    
544    env.Alias('build_dudley', ['install_dudley_headers', 'build_dudley_lib', 'build_dudleycpp_lib'])
545    env.Alias('install_dudley', ['build_dudley', 'install_dudley_lib', 'install_dudleycpp_lib', 'install_dudley_py'])
546    
547    env.Alias('build_finley', ['install_finley_headers', 'build_finley_lib', 'build_finleycpp_lib'])
548    env.Alias('install_finley', ['build_finley', 'install_finley_lib', 'install_finleycpp_lib', 'install_finley_py'])
549    
550    env.Alias('build_ripley', ['install_ripley_headers', 'build_ripley_lib', 'build_ripleycpp_lib'])
551    env.Alias('install_ripley', ['build_ripley', 'install_ripley_lib', 'install_ripleycpp_lib', 'install_ripley_py'])
552    
553    env.Alias('build_speckley', ['install_speckley_headers', 'build_speckley_lib', 'build_speckleycpp_lib'])
554    env.Alias('install_speckley', ['build_speckley', 'install_speckley_lib', 'install_speckleycpp_lib', 'install_speckley_py'])
555    
556    env.Alias('build_weipa', ['install_weipa_headers', 'build_weipa_lib', 'build_weipacpp_lib'])
557    env.Alias('install_weipa', ['build_weipa', 'install_weipa_lib', 'install_weipacpp_lib', 'install_weipa_py'])
558    
559    env.Alias('build_escriptreader', ['install_weipa_headers', 'build_escriptreader_lib'])
560    env.Alias('install_escriptreader', ['build_escriptreader', 'install_escriptreader_lib'])
561    
562    # Now gather all the above into some easy targets: build_all and install_all
563    build_all_list = []
564    build_all_list += ['build_esysUtils']
565    build_all_list += ['build_paso']
566    build_all_list += ['build_escript']
567    build_all_list += ['build_pasowrap']
568    build_all_list += ['build_dudley']
569    build_all_list += ['build_finley']
570    build_all_list += ['build_ripley']
571    build_all_list += ['build_speckley']
572    build_all_list += ['build_weipa']
573    if not IS_WINDOWS: build_all_list += ['build_escriptreader']
574    if env['usempi']:   build_all_list += ['build_pythonMPI']
575    build_all_list += ['build_escriptconvert']
576    env.Alias('build_all', build_all_list)
577    
578    install_all_list = []
579    install_all_list += ['target_init']
580    install_all_list += ['install_esysUtils']
581    install_all_list += ['install_paso']
582    install_all_list += ['install_escript']
583    install_all_list += ['install_pasowrap']
584    install_all_list += ['install_dudley']
585    install_all_list += ['install_finley']
586    install_all_list += ['install_ripley']
587    install_all_list += ['install_speckley']
588    install_all_list += ['install_weipa']
589    if not IS_WINDOWS: install_all_list += ['install_escriptreader']
590    install_all_list += ['install_downunder_py']
591    install_all_list += ['install_modellib_py']
592    install_all_list += ['install_pycad_py']
593    if env['usempi']:   install_all_list += ['install_pythonMPI']
594    install_all_list += ['install_escriptconvert']
595    env.Alias('install_all', install_all_list)
596    
597    # Default target is install
598    env.Default('install_all')
599    
600    ################## Targets to build and run the test suite ###################
601    
602    if not env['cppunit']:
603        test_msg = env.Command('.dummy.', None, '@echo "Cannot run C++ unit tests, CppUnit not found!";exit 1')
604        env.Alias('run_tests', test_msg)
605        env.Alias('build_tests', '')
606    env.Alias('run_tests', ['install_all'])
607    env.Alias('all_tests', ['install_all', 'run_tests', 'py_tests'])
608    env.Alias('build_full',['install_all','build_tests','build_py_tests'])
609    env.Alias('build_PasoTests','$BUILD_DIR/$PLATFORM/paso/profiling/PasoTests')
610    
611    ##################### Targets to build the documentation #####################
612    
613    env.Alias('pdfdocs',['user_pdf', 'install_pdf', 'cookbook_pdf', 'inversion_pdf'])
614    env.Alias('basedocs', ['pdfdocs','examples_tarfile', 'examples_zipfile', 'api_doxygen'])
615    env.Alias('docs', ['basedocs', 'sphinxdoc'])
616    env.Alias('release_prep', ['docs', 'install_all'])
617    env.Alias('release_prep_old', ['basedocs', 'api_epydoc', 'install_all'])
618    
619    # The test scripts are always generated, this target allows us to
620    # generate the testscripts without doing a full build
621    env.Alias('testscripts',[])
622    
623    if not IS_WINDOWS:
624        generateTestScripts(env, TestGroups)
625    
626    
627    
628    ######################## Summarize our environment ###########################
629    def print_summary():
630        print("")
631        print("*** Config Summary (see config.log and <prefix>/lib/buildvars for details) ***")
632        print("Escript/Finley revision %s"%global_revision)
633        print("  Install prefix:  %s"%env['prefix'])
634        print("          Python:  %s"%sysconfig.PREFIX)
635        print("           boost:  %s"%env['boost_prefix'])
636        if env['numpy_h']:
637            print("           numpy:  YES (with headers)")
638        else:
639            print("           numpy:  YES (without headers)")
640        if env['usempi']:
641            print("             MPI:  YES (flavour: %s)"%env['mpi'])
642        else:
643            print("             MPI:  DISABLED")
644        if env['uselapack']:
645            print("          LAPACK:  YES (flavour: %s)"%env['lapack'])
646        else:
647            print("          LAPACK:  DISABLED")
648        d_list=[]
649        e_list=[]
650        for i in 'debug','openmp','boomeramg','gdal','mkl','netcdf','papi','parmetis','pyproj','scipy','silo','sympy','umfpack','visit','vsl_random':
651            if env[i]: e_list.append(i)
652            else: d_list.append(i)
653        for i in e_list:
654            print("%16s:  YES"%i)
655        for i in d_list:
656            print("%16s:  DISABLED"%i)
657        if env['cppunit']:
658            print("         CppUnit:  FOUND")
659        else:
660            print("         CppUnit:  NOT FOUND")
661        if env['gmsh']=='m':
662            print("            gmsh:  FOUND, MPI-ENABLED")
663        elif env['gmsh']=='s':
664            print("            gmsh:  FOUND")
665        else:
666            print("            gmsh:  NOT FOUND")
667        print(    "            gzip:  " + ("YES" if env['compressed_files'] else "NO"))
668    
669        if ((fatalwarning != '') and (env['werror'])):
670            print("  Treating warnings as errors")
671        else:
672            print("  NOT treating warnings as errors")
673        print("")
674        for w in env['warnings']:
675            print("WARNING: %s"%w)
676        if len(GetBuildFailures()):
677            print("\nERROR: build stopped due to errors\n")
678        else:
679            print("\nSUCCESS: build complete\n")
680    
681  try:  atexit.register(print_summary)
    api_doxygen = env.Dir(env['api_doxygen'])  
 except KeyError:  
    api_doxygen = None  
682    
 # Zipgets  
 env.Default(libinstall)  
 env.Default(incinstall)  
 env.Default(pyinstall)  
 env.Alias('release_src',[ src_zipfile, src_tarfile ])  
 env.Alias('release_tests',[ test_zipfile, test_tarfile])  
 env.Alias('release_examples',[ examples_zipfile, examples_tarfile])  
 env.Alias('examples_zipfile',examples_zipfile)  
 env.Alias('examples_tarfile',examples_tarfile)  
 env.Alias('api_epydoc',api_epydoc)  
 env.Alias('api_doxygen',api_doxygen)  
 env.Alias('guide_html_index',guide_html_index)  
 env.Alias('guide_pdf', guide_pdf)  
 env.Alias('docs',[ 'release_examples', 'guide_pdf', api_epydoc, api_doxygen])  
 env.Alias('release', ['release_src', 'release_tests', 'docs'])  
 env.Alias('build_tests')    # target to build all C++ tests  
 env.Alias('build_py_tests') # target to build all python tests  
 env.Alias('build_all_tests', [ 'build_tests', 'build_py_tests' ] ) # target to build all python tests  
 env.Alias('run_tests', 'build_tests')   # target to run all C++ test  
 env.Alias('py_tests', 'build_py_tests') # taget to run all released python tests  
 env.Alias('all_tests', ['run_tests', 'py_tests']) # target to run all C++ and released python tests  
   
 # Python install - esys __init__.py  
 init_target = env.Command(pyinstall+'/__init__.py', None, Touch('$TARGET'))  
 env.Alias(init_target)  
   
 # Allow sconscripts to see the env  
 Export(["IS_WINDOWS_PLATFORM", "env", "incinstall", "libinstall", "pyinstall", "dodebug", "mkl_libs", "scsl_libs", "umf_libs", "amd_libs", "blas_libs", "netCDF_libs", "useNetCDF",  
     "boost_libs", "python_libs", "doxygen_path", "epydoc_path", "papi_libs",  
         "sys_libs", "test_zipfile", "src_zipfile", "test_tarfile", "src_tarfile", "examples_tarfile", "examples_zipfile",  
         "guide_pdf", "guide_html_index", "api_epydoc", "api_doxygen", "useMPI" ])  
   
 # End initialisation section  
 # Begin configuration section  
 # adds this file and the scons option directore to the source tar  
 release_srcfiles=[env.File('SConstruct'),]+[ env.File(x) for x in glob.glob('scons/*.py') ]  
 release_testfiles=[env.File('README_TESTS'),]  
 env.Zip(src_zipfile, release_srcfiles)  
 env.Zip(test_zipfile, release_testfiles)  
 try:  
    env.Tar(src_tarfile, release_srcfiles)  
    env.Tar(test_tarfile, release_testfiles)  
 except AttributeError:  
    pass  
 # Insert new components to be build here  
 # FIXME: might be nice to replace this verbosity with a list of targets and some  
 # FIXME: nifty python to create the lengthy but very similar env.Sconscript lines  
 # Third Party libraries  
 env.SConscript(dirs = ['tools/CppUnitTest/src'], build_dir='build/$PLATFORM/tools/CppUnitTest', duplicate=0)  
 # C/C++ Libraries  
 env.SConscript(dirs = ['paso/src'], build_dir='build/$PLATFORM/paso', duplicate=0)  
 # bruce is removed for now as it doesn't really do anything  
 # env.SConscript(dirs = ['bruce/src'], build_dir='build/$PLATFORM/bruce', duplicate=0)  
 env.SConscript(dirs = ['escript/src'], build_dir='build/$PLATFORM/escript', duplicate=0)  
 env.SConscript(dirs = ['esysUtils/src'], build_dir='build/$PLATFORM/esysUtils', duplicate=0)  
 env.SConscript(dirs = ['finley/src'], build_dir='build/$PLATFORM/finley', duplicate=0)  
 env.SConscript(dirs = ['modellib/py_src'], build_dir='build/$PLATFORM/modellib', duplicate=0)  
 env.SConscript(dirs = ['doc'], build_dir='build/$PLATFORM/doc', duplicate=0)  
 env.SConscript(dirs = ['pyvisi/py_src'], build_dir='build/$PLATFORM/pyvisi', duplicate=0)  
 env.SConscript(dirs = ['pycad/py_src'], build_dir='build/$PLATFORM/pycad', duplicate=0)  
   
 # added by Ben Cumming  
 env.SConscript(dirs = ['pythonMPI/src'], build_dir='build/$PLATFORM/pythonMPI', duplicate=0)  
 #env.SConscript(dirs = ['../test'], build_dir='../test/build', duplicate=0)  

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