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#!/bin/sh |
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# |
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# Submit a PBS job to run the tests |
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# |
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# Usage: autotest-scons # Short testing, only C++ tests |
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# Usage: autotest-scons run_tests # Short testing, only C++ tests |
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# Usage: autotest-scons all_tests # Long testing, C++ and python tests |
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# |
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# Copy this somewhere and run it every day via cron |
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# |
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# This file should be maintained in SVN as esys13/trunk/autotest-scons, |
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# be sure to copy it there and commit after modification |
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# |
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# Which tests should we run? |
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target='run_tests' # Default scons target that runs the tests |
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test "x$1" != "x" && target="$1" |
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requested_cpus=2 |
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test "x$target" = "xall_tests" && requested_cpus=4 |
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# MAIL_RECIPIENTS="l.gross@uq.edu.au elspeth@esscc.uq.edu.au matt@esscc.uq.edu.au robert.woodcock@csiro.au Peter.Hornby@csiro.au k.steube@uq.edu.au" |
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MAIL_RECIPIENTS="k.steube@uq.edu.au" |
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RunDate=`date '+%Y_%m_%d'` # Time stamp for log file names |
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WorkDir=/raid3/ksteube/AutoTests |
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cd $WorkDir |
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# Where to put the output of scons run_tests |
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out_file="$WorkDir/Logs/$RunDate.test.output" |
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# Save the name of this script |
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SCRIPT_NAME=$0 |
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# Below here \$variable means I want the variable interpreted when PBS runs the job, not when the job is submitted |
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# Similarly for \`...\` |
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# Write the PBS script to run the tests |
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cat << EOF > Logs/$RunDate.pbs.script.sh |
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#!/bin/bash |
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#PBS -q q1 |
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#PBS -N autotest |
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#PBS -l ncpus=$requested_cpus |
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#PBS -o $RunDate.pbs.stdout |
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#PBS -e $RunDate.pbs.stderr |
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#PBS -W umask=022 |
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echo "PBS_JOBNAME \$PBS_JOBNAME" |
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echo "PBS_JOBID \$PBS_JOBID" |
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echo "PBS_QUEUE \$PBS_QUEUE" |
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echo "NCPUS \$NCPUS" |
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echo "USER \$USER" |
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echo "PBS_O_HOST \$PBS_O_HOST" |
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echo "PBS_O_WORKDIR \$PBS_O_WORKDIR" |
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echo "PBS_O_SHELL \$PBS_O_SHELL" |
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date |
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echo "" |
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echo "" |
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START=\`date '+%Y/%m/%d %H:%M'\` |
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finish () { |
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date |
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# Clean up the sandbox |
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cd $WorkDir |
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/bin/rm -rf sandbox.$RunDate |
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END=\`date '+%Y/%m/%d %H:%M'\` |
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cat << END_MSG | mail -s "ESYS_TESTS $target $RunDate \$1" $MAIL_RECIPIENTS |
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\$2. |
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The tests ran from \$START to \$END on \$NCPUS CPUs |
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See the log files in $WorkDir/Logs/$RunDate* |
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This mail was sent by $SCRIPT_NAME |
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running as \$USER on \`hostname\`. |
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END_MSG |
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test "x\$1" = "FAILURE" && exit 1 |
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exit 0 |
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} |
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cd $WorkDir || finish FAILURE "Could not cd to WorkDir $WorkDir" |
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# Create an empty out_file |
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cat /dev/null > $out_file || finish FAILURE "Could not create out_file $out_file" |
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umask 022 |
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test -d sandbox.$RunDate && finish FAILURE "Today's sandbox already exists" |
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mkdir sandbox.$RunDate || finish FAILURE "Could not mkdir sandbox" |
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cd sandbox.$RunDate || finish FAILURE "Could not cd to sandbox" |
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echo "Checking out esys13/trunk" |
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svn checkout svn+ssh://shake200.esscc.uq.edu.au/home/www_svn/repos/esys13/trunk >> $out_file 2>&1 || finish FAILURE "Could not check out esys13/trunk" |
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# Load modules |
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. /opt/modules/default/init/bash |
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module use /raid2/matt/modules/modulefiles |
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module use /raid2/toolspp4/modulefiles/gcc-3.3.6 |
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module use /usr/share/modules/modulefiles |
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module load esys/env # Recommended modules |
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module load doxygen/1.4.6 |
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module load boost/1.33.0/python-2.4.1 |
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# How many threads? One per CPU. |
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export OMP_NUM_THREADS=\$NCPUS |
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# Run the tests |
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echo "Running the tests $target" |
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cd trunk || finish FAILURE "Could not cd to trunk" |
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scons -j \$NCPUS $target >> $out_file 2>&1 || finish FAILURE "Could not run scons $target" |
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echo "Cleaning up after the tests" |
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# Delete files older than 21 days |
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find $WorkDir -atime +21 -exec rm -f {} \; |
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finish SUCCESS "Successfully ran 'scons $target' on \`hostname\`" |
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EOF |
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# cd to the logs area so the PBS logs are deposited there |
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cd $WorkDir/Logs |
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# Submit the job |
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. /opt/modules/default/init/sh |
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module load pbspro |
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qsub -S /bin/bash $RunDate.pbs.script.sh > /dev/null |
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