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Thu Sep 1 03:11:26 2011 UTC (7 years, 11 months ago) by jfenwick
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Fixed some bib entries, changed visit script in guide to use " instead of '.
Reworded a sentence.

1 gross 2484 Created by Kbib version 0.6.5
2     \#Last modified: Wed May 20 10:08:05 2009
3 jgs 102
4 gross 2484 @Book{ SAAD,
5     author = "Y. Saad",
6 gross 3502 title = "{Iterative Methods for Sparse Linear Systems}",
7 gross 2484 publisher = "PWS Publishing Company",
8     year = "1996",
9     address = "20 Park Plaza, Boston, MA 02116, USA"
10 gross 2371 }
11 jfenwick 1966
12 gross 2484 @Book{ WEISS,
13     author = "R. Weiss",
14 gross 3502 title = "{Parameter-Free Iterative Linear Solvers}",
15 gross 2484 publisher = "Akademie Verlag",
16     year = "1996",
17 gross 3502 series = "{Mathematical Research, vol.\ 97}",
18 gross 2484 address = "Berlin"
19 jfenwick 1966 }
20    
21 artak 2976 @Book{ Multigrid,
22 gross 3502 author = {U. Trottenberg and C. W. Oosterlee and A. Sch{\"u}ller},
23     title = "{Multigrid}",
24 artak 2976 publisher = "Academic Press",
25     year = "2001"
26     }
27    
28 gross 2484 @Book{ AMG,
29     author = "Y. Shapira",
30 gross 3502 title = "{Matrix-Based Multigrid}",
31 gross 2484 publisher = "Springer",
32     year = "2008"
33 gross 2371 }
34 jgs 102
35 gross 2484 @Book{ NumHand,
36     author = "P.~G. Ciarlet and J.~L. Lions",
37 gross 3502 title = "{Handbook of Numerical Analysis}",
38 gross 2484 publisher = "North Holland",
39     year = "1991",
40     volume = "2",
41     address = "Amsterdam"
42 gross 2371 }
43 jgs 102
44 gross 2484 @InProceedings{ NUMARRAY,
45 gross 3502 title = "{An Array Module for Python}",
46     booktitle = "{Astronomical Data Analysis Software and Systems XI}",
47     author = "Todd Miller and Jin-Chung Hsu and Perry Greenfield and Richard L. White",
48 gross 2484 year = "2001"
49 jgs 113 }
50    
51 gross 2484 @Book{ Zienc,
52     author = "O.~C. Zienkiewicz",
53 gross 3502 title = "{The Finite Element Method in Engineering Science}",
54 gross 2484 publisher = "McGraw-Hill",
55     year = "1971",
56     address = "London",
57     edition = "second"
58 gross 2371 }
59    
60 gross 2484 @Article{ SUPG2,
61     author = "H.C. Elman and A. Ramage",
62 gross 3502 title = "{An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation}",
63 gross 2484 journal = "SIAM J. Numer. Anal.",
64     year = "2002",
65     volume = "40",
66     number = "1",
67     pages = "254--281"
68 gross 2371 }
69    
70 gross 2484 @Book{ TURCOTTE2002,
71     author = "Donald L. Turcotte and Gerald Schubert",
72 gross 3502 title = "{Geodynamics}",
73 gross 2484 publisher = "Cambridge University Press",
74 gross 2371 year = 2002,
75 gross 2484 edition = "Second"
76 gross 2371 }
77    
78 gross 2484 @Article{ MORESI2003,
79 gross 3502 title = "{A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials}",
80     author = "L. Moresi and F. Dufour and H.--B. Muhlhaus",
81 gross 2484 journal = "Journal of Computational Physics",
82 gross 3502 pages = "476--497",
83 gross 2371 number = 184,
84 gross 3502 year = 2003
85 jgs 113 }
86    
87 gross 2484 @Article{ GROSZ99c,
88     author = "L.~Grosz",
89 gross 3502 title = "{Preconditioning by Incomplete Block Elimination}",
90 gross 2484 journal = "J. of Num. Lin. Alg. with Appl.",
91     year = "2000",
92     note = "to appear"
93 gross 2371 }
94 lgraham 1700
95 gross 2484 @Book{ VTK,
96     author = "Inc {The Kitware}",
97 gross 3502 title = "{Visualization Toolkit User's Guide.}",
98 gross 2484 publisher = "Kitware, Inc publishers.",
99     year = "1971",
100     address = "London",
101     edition = "second"
102 gross 2371 }
103 lgraham 1700
104 gross 2484 @Article{ BOURGOUIN2006,
105     author = "L. Bourgouin and H. Muhlhaus and A. J. Hale and A. Arsac",
106 gross 3502 title = "{Towards realistic simulations of lava dome growth using the level set method}",
107 gross 2484 journal = "Acta Geotechnica",
108     year = "2006",
109     volume = "1",
110     number = "4",
111     pages = "225--236"
112 gross 2371 }
113 lgraham 2115
114 gross 2484 @Article{ SUSSMAN1994,
115     author = "M. Sussman and P. Smereka and S. Osher",
116 gross 3502 title = "{A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow}",
117 gross 2484 journal = "Journal of Computational Physics",
118     year = "1994",
119     volume = "114",
120     pages = "146--159"
121 gross 2371 }
122 lgraham 2115
123 gross 2484 @Article{ LIN2005,
124     author = "C. Lin and H. Lee and T. Lee and L. J. Weber",
125 gross 3502 title = "{A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows}",
126 gross 2484 journal = "International Journal for Numerical Methods in Fluids",
127     year = "2005",
128     volume = "49",
129     pages = "521--547"
130 gross 2371 }
131 lgraham 1700
132 gross 2484 @Article{ SUCKALE2008,
133     author = "J. Suckale and J. C. Have",
134 gross 3502 title = "{An alternative numerical model of buoyancy driven flows}",
135 gross 2484 year = "2008",
136     pages = "1--43"
137 gross 2371 }
138 lgraham 1700
139 gross 2484 @Article{ GROSS2006,
140     author = "L. Gross and L. Bourgouin and A. J. Hale and H.-B Muhlhaus",
141 gross 3502 title = "{Interface Modeling in Incompressible Media using Level Sets in Escript}",
142 gross 2484 journal = "Physics of the Earth and Planetary Interiors",
143 gross 2432 year = 2007,
144 gross 2484 volume = "163",
145     pages = "23--34",
146     month = "Aug.",
147     doi = "doi:10.1016/j.pepi.2007.04.004"
148 gross 2371 }
149 lgraham 1700
150 gross 2484 @Article{ VANKEKEN1997,
151     author = "P. E. {van Keken} and S. D. King and H. Schmeling and U. R. Christensen and D. Neumeister and M. P. Doin",
152 gross 3502 title = "{A comparison of methods for the modeling of thermochemical convection}",
153 gross 2484 journal = "J. Geophys. Res.",
154     year = "1997",
155     volume = "102",
156     number = "B10",
157     pages = "22477--22495"
158 gross 2371 }
159 lgraham 1700
160 gross 2484 @Article{ AAMIRBERKYAN2008,
161     author = "A. Amirberkyan and L. Gross",
162 gross 3502 title = "{Efficient Solvers for Incompressible Fluid Flows in Geosciences}",
163 gross 2484 journal = "ANZIAM Journal",
164     year = "2008",
165     volume = "50",
166     pages = "C189--C203"
167 gross 2371 }
168 lgraham 1700
169 gross 2484 @Article{ MBENZI2005,
170     author = "M. Benzi and G. H. Golub and J. Liesen",
171 gross 3502 title = "{Numerical solution of saddle point problems}",
172 gross 2484 journal = "Acta Numerica",
173     year = "2005",
174     volume = "14",
175     pages = "1--137"
176 gross 2371 }
177 jfenwick 1966
178 gross 2484 @Misc{ OPENDX,
179     key = "opendx",
180     title = "{OpenDX}",
181     howpublished = "http://www.opendx.org/",
182     url = "http://www.opendx.org/"
183 gross 2371 }
184 jfenwick 1966
185 gross 2484 @Misc{ netCDF,
186     key = "netcdf",
187     title = "{netCDF}",
188     howpublished = "http://www.unidata.ucar.edu/software/netcdf",
189     url = "http://www.unidata.ucar.edu/software/netcdf"
190 jfenwick 1966 }
191    
192 gross 2484 @Misc{ UMFPACK,
193     key = "umfpack",
194     howpublished = "http://www.cise.ufl.edu/research/sparse/umfpack/",
195     url = "http://www.cise.ufl.edu/research/sparse/umfpack/"
196 jfenwick 1966 }
197    
198 gross 2484 @Misc{ MKL,
199     key = "MKL",
200 gross 3502 title = "{INTEL's Math Kernel Library}"
201 jfenwick 1966 }
202    
203 gross 2484 @Misc{ VisIt,
204     key = "visit",
205 caltinay 3367 title = "{VisIt homepage}",
206 gross 2484 howpublished = "https://wci.llnl.gov/codes/visit/home.html",
207     url = "https://wci.llnl.gov/codes/visit/home.html"
208 jfenwick 1966 }
209    
210 gross 2484 @Misc{ OPENMP,
211     key = "openmp",
212     title = "{OpenMP}",
213     howpublished = "http://openmp.org",
214     url = "http://openmp.org"
215 lgraham 2128 }
216    
217 gross 2484 @Misc{ MPI,
218     key = "mpi",
219     title = "{MPI}",
220     howpublished = "http://www.mpi-forum.org",
221     url = "http://www.mpi-forum.org"
222 jfenwick 2331 }
223    
224 gross 2484 @Book{ LBB,
225     author = "V. Girault and P. A. Raviart",
226 gross 3502 title = "{Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms}",
227 gross 2484 publisher = "Springer Verlag, Berlin",
228     year = 1986
229 gross 2371 }
230    
231 gross 2718 @Misc{ SCSL,
232 gross 3502 title = "{SCSL (Scientific Computing Software Library)}",
233 gross 2484 url = "http://www.sgi.com/products/software/irix/scsl.html"
234 gross 2371 }
235    
236 gross 2484 @Manual{ GMSH,
237 gross 3502 title = "{Gmsh Reference Manual}",
238 gross 2484 author = "Christophe Geuzaine and Jean-Francois Remacle",
239     edition = "1.12",
240     month = "Aug",
241 gross 2371 year = 2003,
242 gross 2484 url = "http://www.geuz.org/gmsh"
243 gross 2371 }
244    
245 gross 2484 @Article{ RILU,
246 gross 3502 title = "{ARMS: an algebraic recursive multilevel solver for general sparse linear systems}",
247     author = "B. Suchomel and Y. Saad",
248 gross 2484 journal = "Numerical Linear Algebra with Applications",
249 gross 3502 pages = "1099--1506",
250 gross 2484 volume = "9",
251 gross 2371 number = 5,
252 gross 3502 year = 2002
253 gross 2371 }
254    
255 gross 3502 @Article{ PASTIX,
256     author = "P. H{\'e}non and P. Ramet and J. Roman",
257     title = "{{PaStiX}: A High-Performance Parallel Direct Solver for Sparse Symmetric Definite Systems}",
258     journal = "Parallel Computing",
259     year = "2002",
260     volume = "28",
261     number = "2",
262     pages = "301--321",
263     month = jan
264 caltinay 3293 }
265    
266 gross 3502 @Article{ Trilinos,
267     author = "Michael A. Heroux and Roscoe A. Bartlett and Vicki E. Howle and Robert J. Hoekstra and Jonathan J. Hu and Tamara G. Kolda and Richard B. Lehoucq and Kevin R. Long and Roger P. Pawlowski and Eric T. Phipps and Andrew G. Salinger and Heidi K. Thornquist and Ray S. Tuminaro and James M. Willenbring and Alan Williams and Kendall S. Stanley",
268     title = "{An overview of the Trilinos project}",
269     journal = "ACM Trans. Math. Softw.",
270     volume = "31",
271     number = "3",
272     year = "2005",
273     pages = "397--423",
274     publisher = "ACM Press",
275     address = "New York, NY, USA"
276 caltinay 3316 }
277    
278 gross 3502 @Article{ SuperLU,
279     author = "James W. Demmel and Stanley C. Eisenstat and John R. Gilbert and Xiaoye S. Li and Joseph W. H. Liu",
280     title = "{A supernodal approach to sparse partial pivoting}",
281     journal = "SIAM J. Matrix Analysis and Applications",
282     year = "1999",
283     volume = "20",
284     number = "3",
285     pages = "720--755"
286 caltinay 3316 }
287    
288 gross 3502 @Misc{ RIGHTHANDRULE,
289 jfenwick 3570 key="RHR",
290 gross 3502 title = "{Right-hand rule}",
291 jfenwick 3570 howpublished = "http://en.wikipedia.org/wiki/Right-hand_rule",
292 gross 2484 url = "http://en.wikipedia.org/wiki/Right-hand_rule"
293 gross 2371 }
294    
295 gross 2718 @Misc{ TETGEN,
296 gross 3502 title = "{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator}",
297 gross 2484 author = "Hang Si",
298     month = "Jan",
299 gross 2371 year = 2008,
300 gross 2718 howpublished = "http://tetgen.berlios.de",
301 gross 2484 url = "http://tetgen.berlios.de"
302 gross 2371 }
303    
304 gross 2718 @Misc{ NETGEN,
305 gross 3502 title = "{Netgen 1.4}",
306 gross 2484 author = "Tim Edwards",
307 gross 2718 howpublished = "http://opencircuitdesign.com/netgen/",
308 gross 2484 url = "http://opencircuitdesign.com/netgen/"
309 gross 2371 }
310    
311 gross 2484 @Article{ ELMAN,
312 jfenwick 3570 title = "Efficient preconditioning of the linearized Navier-Stokes equations for incompressible flow",
313     journal = "Journal of Computational and Applied Mathematics",
314     volume = "128",
315     number = "1--2",
316     pages = "261--279",
317     year = "2001",
318     note = "",
319     issn = "0377-0427",
320     doi = "DOI: 10.1016/S0377-0427(00)00515-X",
321     url = "http://www.sciencedirect.com/science/article/pii/S037704270000515X",
322     author = "David Silvester and Howard Elman and David Kay and Andrew Wathen",
323     keywords = "Navier-Stokes equations",
324     keywords = "Incompressible flow",
325     keywords = "Preconditioning",
326     keywords = "Multigrid iteration"
327 gross 2371 }
328    
329 gross 2484 @Article{ LEASTSQUARESFEM1994,
330 gross 2574 author = "A. I. Pehlivanov and G. F. Carey and R. D. Lazarov",
331 gross 3502 title = "{Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems}",
332 gross 2484 journal = "SIAM Journal on Numerical Analysis",
333 gross 2371 year = 1994,
334 gross 2484 volume = "31",
335 gross 2371 number = 5,
336 gross 2484 pages = "1368--1377",
337     month = "October"
338 gross 2371 }
339    
340 gross 2484 @Article{ Muhlhaus2005,
341 gross 3502 title = "{Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection}",
342     author = "Hans-Bernd Muhlhaus and Klaus Regenauer-Lieb",
343 gross 2484 journal = "Geophysical Journal International",
344 gross 3502 pages = "788--800(13)",
345 gross 2484 volume = "163",
346 gross 2371 number = 2,
347 gross 3502 month = "November",
348     year = 2005
349 gross 2484 }
350 gross 2371
351 gross 2574 @Manual{ NUMPY,
352 gross 3502 title = "{Numpy and Scipy Documentation}",
353 gross 2484 url = "http://docs.scipy.org/doc/",
354 gross 2718 howpublished = "http://docs.scipy.org/doc/",
355 gross 2484 author = "Scipy Community"
356 gross 2371 }
357    
358 gross 2574 @Manual{ matplotlib,
359 gross 3502 title = "{matplotlib}",
360 gross 2574 author = "John Hunter and Michael Droettboom and Darren Dale",
361     month = "July",
362     year = "2009",
363 gross 2718 howpublished = "http://matplotlib.sourceforge.net/",
364 gross 2574 url = "http://matplotlib.sourceforge.net/"
365     }
366    
367     @Manual{ mayavi,
368 jfenwick 3570 key="mayavi",
369 gross 3502 title = "{Mayavi2: The next generation scientific data visualization}",
370 gross 2574 year = "2009",
371 gross 2718 howpublished = "https://svn.enthought.com/enthought/wiki/MayaVi",
372 gross 2574 url = "https://svn.enthought.com/enthought/wiki/MayaVi"
373     }
374    
375 gross 2718 @Misc{ gnuplot,
376 gross 3502 title = "{gnuplot homepage}",
377 gross 2580 author = "Thomas Williams and Colin Kelley",
378     month = mar,
379     year = "2009",
380 gross 2718 howpublished = "http://www.gnuplot.info/",
381 gross 2580 url = "http://www.gnuplot.info/"
382     }
383    
384     @Manual{ SCIPY,
385 gross 3502 title = "{Numpy and Scipy Documentation}",
386     author = "The Scipy community community {community community}",
387 gross 2718 howpublished = "http://docs.scipy.org/doc/",
388 gross 2580 url = "http://docs.scipy.org/doc/"
389     }
390    
391 gross 2718 @Misc{ SCSL,
392 gross 3502 title = "{SCSL (Scientific Computing Software Library)}",
393     howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
394     url = "http://www.sgi.com/products/software/irix/scsl.html"
395 gross 2717 }
396    
397 gross 2718 @Misc{ IDEAS,
398 jfenwick 3570 key="IDEAS",
399 gross 3502 title = "{I\_DEAS}",
400     howpublished = "http://www.plm.automation.siemens.com/en\\\_us/products/nx/",
401     url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
402 gross 2717 }
403 gross 3502
404 gross 2718 @Misc{ VRML,
405 jfenwick 3570 key="VRML",
406 gross 3502 title = "{VRML}",
407     howpublished = "http://www.w3.org/MarkUp/VRML/",
408     url = "http://www.w3.org/MarkUp/VRML/"
409 gross 2717 }
410 gross 3502
411 gross 2718 @Misc{ STL,
412 jfenwick 3570 key="STL",
413 gross 3502 title = "{STL}",
414 jfenwick 3570 howpublished = "http://en.wikipedia.org/wiki/STL\_(file\_format)",
415 gross 3502 url = "http://en.wikipedia.org/wiki/STL_(file_format)"
416 gross 2717 }
417 gross 3502
418 gross 2718 @Misc{ NASTRAN,
419 jfenwick 3570 key="NASTRAN",
420 gross 3502 title = "{Nastran}",
421     howpublished = "http://simcompanion.mscsoftware.com/",
422     url = "http://simcompanion.mscsoftware.com/"
423 gross 2717 }
424 gross 3502
425 gross 2718 @Misc{ MEDIT,
426 jfenwick 3570 key="medit",
427 gross 3502 title = "{Medit}",
428     howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
429     url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
430 gross 2717 }
431 gross 3502
432 gross 2718 @Misc{ CGNS,
433 jfenwick 3570 key="cgns",
434 gross 3502 title = "{CGNS}",
435     howpublished = "http://cgns.sourceforge.net/",
436     url = "http://cgns.sourceforge.net/"
437 gross 2717 }
438 gross 3502
439 gross 2718 @Misc{ PLOT3D,
440 jfenwick 3570 key="plot3d",
441 gross 3502 title = "{Plot3D}",
442     howpublished = "http://www.plot3d.net/",
443     url = "http://www.plot3d.net/"
444 gross 2717 }
445 gross 3502
446 gross 2718 @Misc{ DIFFPACK,
447 jfenwick 3570 key="diffpack",
448 gross 3502 title = "{Diffpack}",
449     howpublished = "http://www.diffpack.com/",
450     url = "http://www.diffpack.com/"
451 gross 2717 }
452 gross 3502
453     @InProceedings{ lazyauspdc,
454     author = "Joel Fenwick and Lutz Gross",
455     title = "{Lazy Evaluation of PDE Coefficients in the EScript System}",
456     booktitle = "{Parallel and Distributed Computing 2010 (AusPDC2010)}",
457     pages = "71--76",
458     year = "2010",
459     editor = "Jinjun Chen and Rajiv Ranjan",
460     volume = "107",
461     series = "{Conferences in Research and Practice in Information Technology}",
462     month = "January",
463     issn = "1445-1336"
464 jfenwick 2923 }
465 gross 2717
466 gross 3502 @InProceedings{ LoulaCorrea2006a,
467     title = "{NUMERICAL ANALYSIS OF STABILIZED MIXED FINITE ELEMENT METHODS FOR DARCY FLOW }",
468     booktitle = "{III European Conference on Computational Mechanics Solids, Structures and Coupled Problems in Engineering }",
469     author = "Abimael F. D. Loula and Maicon R. Correa",
470     editor = "C.A. Mota Soares and others",
471     year = "2006 ",
472     localfile = "LoulaCorrea2006a.pdf"
473     }
474    
475     @Article{ MasudHughes2002a,
476     title = "{A stabilized mixed finite element method for Darcy flowArif Masud
477    
478     }",
479     author = "Arif Masud and Thomas J.R. Hughes",
480     journal = "Comput. Methods Appl. Mech. Engrg.",
481     pages = "4341--4370",
482     number = "191",
483     year = "2002",
484     localfile = "MasudHughes2002a.pdf
485     "
486     }
487    

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