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1  % $Id$  Created by Kbib version 0.6.5
2    \#Last modified: Wed May 20 10:08:05 2009
3    
4  @BOOK{SAAD,  @Book{ SAAD,
5    AUTHOR  = {Y. Saad},      author = "Y. Saad",
6    EDITOR  = {},      title = "Iterative Methods for Sparse Linear Systems",
7    TITLE   = {Iterative Methods for Sparse Linear Systems},      publisher = "PWS Publishing Company",
8    PUBLISHER = {PWS Publishing Company},      year = "1996",
9    YEAR    = {1996},      address = "20 Park Plaza, Boston, MA 02116, USA"
10    SERIES  = {},  }
11    ADDRESS = {20 Park Plaza, Boston, MA 02116, USA},  
12   NOTE    = {}   }  @Book{ WEISS,
13        author = "R. Weiss",
14  @BOOK{WEISS,      title = "Parameter-Free Iterative Linear Solvers",
15    AUTHOR  = {R. Weiss},      publisher = "Akademie Verlag",
16    TITLE   = {Parameter-Free Iterative Linear Solvers},      year = "1996",
17    SERIES  = {Mathematical Research, vol.\ 97},      series = "Mathematical Research, vol.\ 97",
18    PUBLISHER = {Akademie Verlag},      address = "Berlin"
19    YEAR    = {1996},  }
20    ADDRESS = {Berlin},  
21    NOTE    = {}   }  @Book{ Multigrid,
22        author = "U. Trottenberg and C. W. Oosterlee and A. Schüller",
23  % FEM stuff      title = "Multigrid",
24  @BOOK{NumHand,      publisher = "Academic Press",
25    AUTHOR  = {P.~G. Ciarlet and J.~L. Lions},      year = "2001"
26    TITLE   = {Handbook of Numerical Analysis},  }
27    VOLUME  = {2},  
28    YEAR    = {1991},  @Book{ AMG,
29    PUBLISHER = {North Holland},      author = "Y. Shapira",
30    ADDRESS = {Amsterdam},      title = "Matrix-Based Multigrid",
31    NOTE    = {}   }      publisher = "Springer",
32        year = "2008"
33  @INPROCEEDINGS{NUMARRAY,  }
34    AUTHOR={Perry Greenfield, Todd Miller, Jin-Chung Hsu and Richard L. White},  
35    TITLE={An Array Module for Python},  @Book{ NumHand,
36    EDITOR={},      author = "P.~G. Ciarlet and J.~L. Lions",
37    BOOKTITLE={Astronomical Data Analysis Software and Systems XI},      title = "Handbook of Numerical Analysis",
38    PUBLISHER={ },YEAR={2001}}      publisher = "North Holland",
39        year = "1991",
40  @BOOK{Zienc,      volume = "2",
41    AUTHOR  = {O.~C. Zienkiewicz},      address = "Amsterdam"
42    TITLE   = {The Finite Element Method in Engineering Science},  }
43    PUBLISHER = {McGraw-Hill},  
44    YEAR    = {1971},  @InProceedings{ NUMARRAY,
45    ADDRESS = {London},      author = "Todd Miller Jin-Chung Hsu {Perry Greenfield} and Richard L. White",
46    EDITION = {second},      title = "An Array Module for Python",
47    NOTE    = {}   }      booktitle = "Astronomical Data Analysis Software and Systems XI",
48        year = "2001"
49  @ARTICLE{SUPG2,  }
50    AUTHOR  = {H.C. Elman and A. Ramage},  
51    TITLE   = {An Analysis of Smoothing Effects of Upwinding Strategies For The Convction-Diffusion Equation}  @Book{ Zienc,
52    JOURNAL = {SIAM J. Numer. Anal.}      author = "O.~C. Zienkiewicz",
53    YEAR    = {2002}      title = "The Finite Element Method in Engineering Science",
54   VOLUME  = {40},      publisher = "McGraw-Hill",
55   NUMBER  = {1},      year = "1971",
56   PAGES   = {254--281}}      address = "London",
57        edition = "second"
58  @Book{TURCOTTE2002,  }
59  author              = { Donald L. Turcotte and Gerald Schubert },  
60  title               = {Geodynamics},  @Article{ SUPG2,
61  year                = 2002,      author = "H.C. Elman and A. Ramage",
62  publisher           = { Cambridge University Press },      title = "An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation",
63  edition             = {Second}      journal = "SIAM J. Numer. Anal.",
64  }      year = "2002",
65        volume = "40",
66  @Article{MORESI2003,      number = "1",
67  author              = { L. Moresi and F. Dufour and H. \-B. M      pages = "254--281"
68  {\"u}hlhaus },  }
69  title               = { A {Lagrangian} integration point finite element  
70  method for  @Book{ TURCOTTE2002,
71                          large deformation modeling of viscoelastic      author = "Donald L. Turcotte and Gerald Schubert",
72  geomaterials      title = "Geodynamics",
73  },      publisher = "Cambridge University Press",
74  journal             = { Journal of Computational Physics },      year = 2002,
75  number              = 184,      edition = "Second"
76  pages               = { 476--497 },  }
77  year                = 2003  
78  }  @Article{ MORESI2003,
79        author = "L. Moresi and F. Dufour and H. \-B. M {\"u}hlhaus",
80  @ARTICLE{GROSZ99c,      title = "A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials",
81    AUTHOR  = {L.~Grosz},      journal = "Journal of Computational Physics",
82    TITLE   = {Preconditioning by Incomplete Block Elimination},      year = 2003,
83    JOURNAL = {J. of Num. Lin. Alg. with Appl.},      number = 184,
84    YEAR    = {2000},      pages = "476--497"
85    NOTE    = {to appear}   }  }
86  % VOLUME  = {1},  
87  % NUMBER  = {1},  @Article{ GROSZ99c,
88  % PAGES   = {3--17},      author = "L.~Grosz",
89        title = "Preconditioning by Incomplete Block Elimination",
90        journal = "J. of Num. Lin. Alg. with Appl.",
91        year = "2000",
92        note = "to appear"
93    }
94    
95    @Book{ VTK,
96        author = "Inc {The Kitware}",
97        title = "Visualization Toolkit User's Guide.",
98        publisher = "Kitware, Inc publishers.",
99        year = "1971",
100        address = "London",
101        edition = "second"
102    }
103    
104    @Article{ BOURGOUIN2006,
105        author = "L. Bourgouin and H. Muhlhaus and A. J. Hale and A. Arsac",
106        title = "Towards realistic simulations of lava dome growth using the level set method",
107        journal = "Acta Geotechnica",
108        year = "2006",
109        volume = "1",
110        number = "4",
111        pages = "225--236"
112    }
113    
114    @Article{ SUSSMAN1994,
115        author = "M. Sussman and P. Smereka and S. Osher",
116        title = "A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow",
117        journal = "Journal of Computational Physics",
118        year = "1994",
119        volume = "114",
120        pages = "146--159"
121    }
122    
123    @Article{ LIN2005,
124        author = "C. Lin and H. Lee and T. Lee and L. J. Weber",
125        title = "A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows",
126        journal = "International Journal for Numerical Methods in Fluids",
127        year = "2005",
128        volume = "49",
129        pages = "521--547"
130    }
131    
132    @Article{ SUCKALE2008,
133        author = "J. Suckale and J. C. Have",
134        title = "An alternative numerical model of buoyancy driven flows",
135        year = "2008",
136        pages = "1--43"
137    }
138    
139    @Article{ GROSS2006,
140        author = "L. Gross and L. Bourgouin and A. J. Hale and H.-B Muhlhaus",
141        title = "Interface Modeling in Incompressible Media using Level Sets in Escript",
142        journal = "Physics of the Earth and Planetary Interiors",
143        year = 2007,
144        volume = "163",
145        pages = "23--34",
146        month = "Aug.",
147        doi = "doi:10.1016/j.pepi.2007.04.004"
148    }
149    
150    @Article{ VANKEKEN1997,
151        author = "P. E. {van Keken} and S. D. King and H. Schmeling and U. R. Christensen and D. Neumeister and M. P. Doin",
152        title = "A comparison of methods for the modeling of thermochemical convection",
153        journal = "J. Geophys. Res.",
154        year = "1997",
155        volume = "102",
156        number = "B10",
157        pages = "22477--22495"
158    }
159    
160    @Article{ AAMIRBERKYAN2008,
161        author = "A. Amirberkyan and L. Gross",
162        title = "Efficient Solvers for Incompressible Fluid Flows in Geosciences",
163        journal = "ANZIAM Journal",
164        year = "2008",
165        volume = "50",
166        pages = "C189--C203"
167    }
168    
169    @Article{ MBENZI2005,
170        author = "M. Benzi and G. H. Golub and J. Liesen",
171        title = "Numerical solution of saddle point problems",
172        journal = "Acta Numerica",
173        year = "2005",
174        volume = "14",
175        pages = "1--137"
176    }
177    
178    @Misc{ OPENDX,
179        key = "opendx",
180        title = "{OpenDX}",
181        howpublished = "http://www.opendx.org/",
182        url = "http://www.opendx.org/"
183    }
184    
185    @Misc{ netCDF,
186        key = "netcdf",
187        title = "{netCDF}",
188        howpublished = "http://www.unidata.ucar.edu/software/netcdf",
189        url = "http://www.unidata.ucar.edu/software/netcdf"
190    }
191    
192    @Misc{ UMFPACK,
193        key = "umfpack",
194        howpublished = "http://www.cise.ufl.edu/research/sparse/umfpack/",
195        url = "http://www.cise.ufl.edu/research/sparse/umfpack/"
196    }
197    
198    @Misc{ MKL,
199        key = "MKL",
200        title = "INTEL's Math Kernel Library"
201    }
202    
203    @Misc{ VisIt,
204        key = "visit",
205        title = "{VisIt homepage}",
206        howpublished = "https://wci.llnl.gov/codes/visit/home.html",
207        url = "https://wci.llnl.gov/codes/visit/home.html"
208    }
209    
210    @Misc{ OPENMP,
211        key = "openmp",
212        title = "{OpenMP}",
213        howpublished = "http://openmp.org",
214        url = "http://openmp.org"
215    }
216    
217    @Misc{ MPI,
218        key = "mpi",
219        title = "{MPI}",
220        howpublished = "http://www.mpi-forum.org",
221        url = "http://www.mpi-forum.org"
222    }
223    
224    @Book{ LBB,
225        author = "V. Girault and P. A. Raviart",
226        title = "Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms",
227        publisher = "Springer Verlag, Berlin",
228        year = 1986
229    }
230    
231    @Misc{ SCSL,
232        title = "SCSL (Scientific Computing Software Library)",
233        url = "http://www.sgi.com/products/software/irix/scsl.html"
234    }
235    
236    @Manual{ GMSH,
237        title = "Gmsh Reference Manual",
238        author = "Christophe Geuzaine and Jean-Francois Remacle",
239        edition = "1.12",
240        month = "Aug",
241        year = 2003,
242        url = "http://www.geuz.org/gmsh"
243    }
244    
245    @Article{ RILU,
246        author = "B. Suchomel {Y. Saad}",
247        title = "ARMS: an algebraic recursive multilevel solver for general sparse linear systems",
248        journal = "Numerical Linear Algebra with Applications",
249        year = 2002,
250        volume = "9",
251        number = 5,
252        pages = "1099--1506"
253    }
254    
255    @Article{PASTIX,
256        author = {H\'enon, P. and Ramet, P. and Roman, J.},
257        title = {{PaStiX}: A High-Performance Parallel Direct Solver for Sparse Symmetric Definite Systems},
258        journal = {Parallel Computing},
259        year = {2002},
260        volume = {28},
261        number = {2},
262        pages = {301--321},
263        month = jan,
264    }
265    
266    @Article{Trilinos,
267        author = {Michael A. Heroux and Roscoe A. Bartlett and Vicki E. Howle and Robert J. Hoekstra and Jonathan J. Hu and Tamara G. Kolda and Richard B. Lehoucq and Kevin R. Long and Roger P. Pawlowski and Eric T. Phipps and Andrew G. Salinger and Heidi K. Thornquist and Ray S. Tuminaro and James M. Willenbring and Alan Williams and Kendall S. Stanley},
268        title = {An overview of the Trilinos project},
269        journal = {ACM Trans. Math. Softw.},
270        volume = {31},
271        number = {3},
272        year = {2005},
273        pages = {397--423},
274        publisher = {ACM Press},
275        address = {New York, NY, USA}
276    }
277    
278    @Article{SuperLU,
279        author  = {James W. Demmel and Stanley C. Eisenstat and
280                   John R. Gilbert and Xiaoye S. Li and Joseph W. H. Liu},
281        title   = {A supernodal approach to sparse partial pivoting},
282        journal = {SIAM J. Matrix Analysis and Applications},
283        year    = {1999},
284        volume  = {20},
285        number  = {3},
286        pages   = {720-755}
287    }
288    
289    @Misc{RIGHTHANDRULE,
290        title = "Right-hand rule",
291        howpublished = "http://en.wikipedia.org/wiki/Right-hand_rule",
292        url = "http://en.wikipedia.org/wiki/Right-hand_rule"
293    }
294    
295    @Misc{ TETGEN,
296        title = "TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator",
297        author = "Hang Si",
298        month = "Jan",
299        year = 2008,
300        howpublished = "http://tetgen.berlios.de",
301        url = "http://tetgen.berlios.de"
302    }
303    
304    @Misc{ NETGEN,
305        title = "Netgen 1.4",
306        author = "Tim Edwards",
307        howpublished = "http://opencircuitdesign.com/netgen/",
308        url = "http://opencircuitdesign.com/netgen/"
309    }
310    
311    @Article{ ELMAN,
312        author = "Howard Elman David Kay {David Silvester} and Andrew Wathen",
313        title = "Efficient Preconditioning of the Linearized Navier-Stokes Equations",
314        journal = "Journal of Computational and Applied Mathematics",
315        year = 2001,
316        number = 128,
317        pages = "261--279"
318    }
319    
320    @Article{ LEASTSQUARESFEM1994,
321        author = "A. I. Pehlivanov and G. F. Carey and R. D. Lazarov",
322        title = "Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems",
323        journal = "SIAM Journal on Numerical Analysis",
324        year = 1994,
325        volume = "31",
326        number = 5,
327        pages = "1368--1377",
328        month = "October"
329    }
330    
331    @Article{ Muhlhaus2005,
332        author = "Hans-Bernd; Regenauer-Lieb Klaus Muhlhaus",
333        title = "Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection",
334        journal = "Geophysical Journal International",
335        year = 2005,
336        volume = "163",
337        number = 2,
338        pages = "788--800(13)",
339        month = "November"
340    }
341    
342    @Manual{ NUMPY,
343        title = "Numpy and Scipy Documentation",
344        url = "http://docs.scipy.org/doc/",
345        howpublished = "http://docs.scipy.org/doc/",
346        author = "Scipy Community"
347    }
348    
349    @Manual{ matplotlib,
350        title = "matplotlib",
351        author = "John Hunter and Michael Droettboom and Darren Dale",
352        month = "July",
353        year = "2009",
354        howpublished = "http://matplotlib.sourceforge.net/",
355        url = "http://matplotlib.sourceforge.net/"
356    }
357    
358    @Manual{ mayavi,
359        title = "Mayavi2: The next generation scientific data visualization",
360        year = "2009",
361        howpublished = "https://svn.enthought.com/enthought/wiki/MayaVi",
362        url = "https://svn.enthought.com/enthought/wiki/MayaVi"
363    }
364    
365    @Misc{ gnuplot,
366        title = "gnuplot homepage",
367        author = "Thomas Williams and Colin Kelley",
368        month = mar,
369        year = "2009",
370        howpublished = "http://www.gnuplot.info/",
371        url = "http://www.gnuplot.info/"
372    }
373    
374    @Manual{ SCIPY,
375        title = "Numpy and Scipy Documentation",
376        author = "The Scipy community",
377        howpublished = "http://docs.scipy.org/doc/",
378        url = "http://docs.scipy.org/doc/"
379    }
380    
381    @Misc{ SCSL,
382            title = "SCSL (Scientific Computing Software Library)",
383            howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
384            url = "http://www.sgi.com/products/software/irix/scsl.html"
385    }
386    
387    @Misc{ IDEAS,
388           title = "I_DEAS",
389           howpublished = "http://www.plm.automation.siemens.com/en_us/products/nx/",
390           url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
391    }
392    @Misc{ VRML,
393            title = "VRML",
394           howpublished = "http://www.w3.org/MarkUp/VRML/",
395           url = "http://www.w3.org/MarkUp/VRML/"
396    }
397    @Misc{ STL,
398            title = "STL",
399           howpublished = "http://en.wikipedia.org/wiki/STL_(file_format)",
400           url = "http://en.wikipedia.org/wiki/STL_(file_format)"
401    }
402    @Misc{ NASTRAN,
403            title = "Nastran",
404           howpublished = "http://simcompanion.mscsoftware.com/",
405           url = "http://simcompanion.mscsoftware.com/"
406    }
407    @Misc{ MEDIT,
408            title = "Medit",
409           howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
410           url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
411    }
412    @Misc{ CGNS,
413            title = "CGNS",
414           howpublished = "http://cgns.sourceforge.net/",
415           url = "http://cgns.sourceforge.net/"
416    }
417    @Misc{ PLOT3D,
418            title = "Plot3D",
419           howpublished = "http://www.plot3d.net/",
420           url = "http://www.plot3d.net/"
421    }
422    @Misc{ DIFFPACK,
423            title = "Diffpack",
424           howpublished = "http://www.diffpack.com/",
425           url = "http://www.diffpack.com/"
426    }
427    @InProceedings{lazyauspdc,
428    author = {Joel Fenwick and Lutz Gross},
429    title = {Lazy Evaluation of PDE Coefficients in the EScript System},
430    booktitle = {Parallel and Distributed Computing 2010 (AusPDC2010)},
431    pages = {71--76},
432    year = {2010},
433    editor = {Jinjun Chen and Rajiv Ranjan},
434    volume = {107},
435    series = {Conferences in Research and Practice in Information Technology},
436    month = {January},
437    issn = {1445-1336}
438    }
439    

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