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1  % $Id$  Created by Kbib version 0.6.5
2    \#Last modified: Wed May 20 10:08:05 2009
3    
4    @Book{ SAAD,
5        author = "Y. Saad",
6        title = "Iterative Methods for Sparse Linear Systems",
7        publisher = "PWS Publishing Company",
8        year = "1996",
9        address = "20 Park Plaza, Boston, MA 02116, USA"
10    }
11    
12    @Book{ WEISS,
13        author = "R. Weiss",
14        title = "Parameter-Free Iterative Linear Solvers",
15        publisher = "Akademie Verlag",
16        year = "1996",
17        series = "Mathematical Research, vol.\ 97",
18        address = "Berlin"
19    }
20    
21    @Book{ AMG,
22        author = "Y. Shapira",
23        title = "Matrix-Based Multigrid",
24        publisher = "Springer",
25        year = "2008"
26    }
27    
28    @Book{ NumHand,
29        author = "P.~G. Ciarlet and J.~L. Lions",
30        title = "Handbook of Numerical Analysis",
31        publisher = "North Holland",
32        year = "1991",
33        volume = "2",
34        address = "Amsterdam"
35    }
36    
37    @InProceedings{ NUMARRAY,
38        author = "Todd Miller Jin-Chung Hsu {Perry Greenfield} and Richard L. White",
39        title = "An Array Module for Python",
40        booktitle = "Astronomical Data Analysis Software and Systems XI",
41        year = "2001"
42    }
43    
44    @Book{ Zienc,
45        author = "O.~C. Zienkiewicz",
46        title = "The Finite Element Method in Engineering Science",
47        publisher = "McGraw-Hill",
48        year = "1971",
49        address = "London",
50        edition = "second"
51    }
52    
53    @Article{ SUPG2,
54        author = "H.C. Elman and A. Ramage",
55        title = "An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation",
56        journal = "SIAM J. Numer. Anal.",
57        year = "2002",
58        volume = "40",
59        number = "1",
60        pages = "254--281"
61    }
62    
63    @Book{ TURCOTTE2002,
64        author = "Donald L. Turcotte and Gerald Schubert",
65        title = "Geodynamics",
66        publisher = "Cambridge University Press",
67        year = 2002,
68        edition = "Second"
69    }
70    
71    @Article{ MORESI2003,
72        author = "L. Moresi and F. Dufour and H. \-B. M {\"u}hlhaus",
73        title = "A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials",
74        journal = "Journal of Computational Physics",
75        year = 2003,
76        number = 184,
77        pages = "476--497"
78    }
79    
80    @Article{ GROSZ99c,
81        author = "L.~Grosz",
82        title = "Preconditioning by Incomplete Block Elimination",
83        journal = "J. of Num. Lin. Alg. with Appl.",
84        year = "2000",
85        note = "to appear"
86    }
87    
88    @Book{ VTK,
89        author = "Inc {The Kitware}",
90        title = "Visualization Toolkit User's Guide.",
91        publisher = "Kitware, Inc publishers.",
92        year = "1971",
93        address = "London",
94        edition = "second"
95    }
96    
97    @Article{ BOURGOUIN2006,
98        author = "L. Bourgouin and H. Muhlhaus and A. J. Hale and A. Arsac",
99        title = "Towards realistic simulations of lava dome growth using the level set method",
100        journal = "Acta Geotechnica",
101        year = "2006",
102        volume = "1",
103        number = "4",
104        pages = "225--236"
105    }
106    
107    @Article{ SUSSMAN1994,
108        author = "M. Sussman and P. Smereka and S. Osher",
109        title = "A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow",
110        journal = "Journal of Computational Physics",
111        year = "1994",
112        volume = "114",
113        pages = "146--159"
114    }
115    
116    @Article{ LIN2005,
117        author = "C. Lin and H. Lee and T. Lee and L. J. Weber",
118        title = "A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows",
119        journal = "International Journal for Numerical Methods in Fluids",
120        year = "2005",
121        volume = "49",
122        pages = "521--547"
123    }
124    
125    @Article{ SUCKALE2008,
126        author = "J. Suckale and J. C. Have",
127        title = "An alternative numerical model of buoyancy driven flows",
128        year = "2008",
129        pages = "1--43"
130    }
131    
132    @Article{ GROSS2006,
133        author = "L. Gross and L. Bourgouin and A. J. Hale and H.-B Muhlhaus",
134        title = "Interface Modeling in Incompressible Media using Level Sets in Escript",
135        journal = "Physics of the Earth and Planetary Interiors",
136        year = 2007,
137        volume = "163",
138        pages = "23--34",
139        month = "Aug.",
140        doi = "doi:10.1016/j.pepi.2007.04.004"
141    }
142    
143    @Article{ VANKEKEN1997,
144        author = "P. E. {van Keken} and S. D. King and H. Schmeling and U. R. Christensen and D. Neumeister and M. P. Doin",
145        title = "A comparison of methods for the modeling of thermochemical convection",
146        journal = "J. Geophys. Res.",
147        year = "1997",
148        volume = "102",
149        number = "B10",
150        pages = "22477--22495"
151    }
152    
153    @Article{ AAMIRBERKYAN2008,
154        author = "A. Amirberkyan and L. Gross",
155        title = "Efficient Solvers for Incompressible Fluid Flows in Geosciences",
156        journal = "ANZIAM Journal",
157        year = "2008",
158        volume = "50",
159        pages = "C189--C203"
160    }
161    
162    @Article{ MBENZI2005,
163        author = "M. Benzi and G. H. Golub and J. Liesen",
164        title = "Numerical solution of saddle point problems",
165        journal = "Acta Numerica",
166        year = "2005",
167        volume = "14",
168        pages = "1--137"
169    }
170    
171    @Misc{ OPENDX,
172        key = "opendx",
173        title = "{OpenDX}",
174        howpublished = "http://www.opendx.org/",
175        url = "http://www.opendx.org/"
176    }
177    
178    @Misc{ netCDF,
179        key = "netcdf",
180        title = "{netCDF}",
181        howpublished = "http://www.unidata.ucar.edu/software/netcdf",
182        url = "http://www.unidata.ucar.edu/software/netcdf"
183    }
184    
185    @Misc{ UMFPACK,
186        key = "umfpack",
187        howpublished = "http://www.cise.ufl.edu/research/sparse/umfpack/",
188        url = "http://www.cise.ufl.edu/research/sparse/umfpack/"
189    }
190    
191    @Misc{ MKL,
192        key = "MKL",
193        title = "INTEL's Math Kernel Library"
194    }
195    
196    @Misc{ VisIt,
197        key = "visit",
198        title = "{VisIt}",
199        howpublished = "https://wci.llnl.gov/codes/visit/home.html",
200        url = "https://wci.llnl.gov/codes/visit/home.html"
201    }
202    
203    @Misc{ OPENMP,
204        key = "openmp",
205        title = "{OpenMP}",
206        howpublished = "http://openmp.org",
207        url = "http://openmp.org"
208    }
209    
210    @Misc{ MPI,
211        key = "mpi",
212        title = "{MPI}",
213        howpublished = "http://www.mpi-forum.org",
214        url = "http://www.mpi-forum.org"
215    }
216    
217    @Book{ LBB,
218        author = "V. Girault and P. A. Raviart",
219        title = "Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms",
220        publisher = "Springer Verlag, Berlin",
221        year = 1986
222    }
223    
224    @Misc{ SCSL,
225        title = "SCSL (Scientific Computing Software Library)",
226        url = "http://www.sgi.com/products/software/irix/scsl.html"
227    }
228    
229    @Manual{ GMSH,
230        title = "Gmsh Reference Manual",
231        author = "Christophe Geuzaine and Jean-Francois Remacle",
232        edition = "1.12",
233        month = "Aug",
234        year = 2003,
235        url = "http://www.geuz.org/gmsh"
236    }
237    
238    @Article{ RILU,
239        author = "B. Suchomel {Y. Saad}",
240        title = "ARMS: an algebraic recursive multilevel solver for general sparse linear systems",
241        journal = "Numerical Linear Algebra with Applications",
242        year = 2002,
243        volume = "9",
244        number = 5,
245        pages = "1099--1506"
246    }
247    
248    @Misc{ RIGHTHANDRULE,
249        title = "Right-hand rule",
250        howpublished = "http://en.wikipedia.org/wiki/Right-hand_rule",
251        url = "http://en.wikipedia.org/wiki/Right-hand_rule"
252    }
253    
254    @Misc{ TETGEN,
255        title = "TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator",
256        author = "Hang Si",
257        month = "Jan",
258        year = 2008,
259        howpublished = "http://tetgen.berlios.de",
260        url = "http://tetgen.berlios.de"
261    }
262    
263    @Misc{ NETGEN,
264        title = "Netgen 1.4",
265        author = "Tim Edwards",
266        howpublished = "http://opencircuitdesign.com/netgen/",
267        url = "http://opencircuitdesign.com/netgen/"
268    }
269    
270    @Article{ ELMAN,
271        author = "Howard Elman David Kay {David Silvester} and Andrew Wathen",
272        title = "Efficient Preconditioning of the Linearized Navier-Stokes Equations",
273        journal = "Journal of Computational and Applied Mathematics",
274        year = 2001,
275        number = 128,
276        pages = "261--279"
277    }
278    
279    @Article{ LEASTSQUARESFEM1994,
280        author = "A. I. Pehlivanov and G. F. Carey and R. D. Lazarov",
281        title = "Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems",
282        journal = "SIAM Journal on Numerical Analysis",
283        year = 1994,
284        volume = "31",
285        number = 5,
286        pages = "1368--1377",
287        month = "October"
288    }
289    
290    @Article{ Muhlhaus2005,
291        author = "Hans-Bernd; Regenauer-Lieb Klaus Muhlhaus",
292        title = "Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection",
293        journal = "Geophysical Journal International",
294        year = 2005,
295        volume = "163",
296        number = 2,
297        pages = "788--800(13)",
298        month = "November"
299    }
300    
301    @Manual{ NUMPY,
302        title = "Numpy and Scipy Documentation",
303        url = "http://docs.scipy.org/doc/",
304        howpublished = "http://docs.scipy.org/doc/",
305        author = "Scipy Community"
306    }
307    
308    @Manual{ matplotlib,
309        title = "matplotlib",
310        author = "John Hunter and Michael Droettboom and Darren Dale",
311        month = "July",
312        year = "2009",
313        howpublished = "http://matplotlib.sourceforge.net/",
314        url = "http://matplotlib.sourceforge.net/"
315    }
316    
317    @Manual{ mayavi,
318        title = "Mayavi2: The next generation scientific data visualization",
319        year = "2009",
320        howpublished = "https://svn.enthought.com/enthought/wiki/MayaVi",
321        url = "https://svn.enthought.com/enthought/wiki/MayaVi"
322    }
323    
324    @Misc{ gnuplot,
325        title = "gnuplot homepage",
326        author = "Thomas Williams and Colin Kelley",
327        month = mar,
328        year = "2009",
329        howpublished = "http://www.gnuplot.info/",
330        url = "http://www.gnuplot.info/"
331    }
332    
333    @Manual{ SCIPY,
334        title = "Numpy and Scipy Documentation",
335        author = "The Scipy community",
336        howpublished = "http://docs.scipy.org/doc/",
337        url = "http://docs.scipy.org/doc/"
338    }
339    
340    @Misc{ SCSL,
341            title = "SCSL (Scientific Computing Software Library)",
342            howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
343            url = "http://www.sgi.com/products/software/irix/scsl.html"
344    }
345    
346    @Misc{ IDEAS,
347           title = "I_DEAS",
348           howpublished = "http://www.plm.automation.siemens.com/en_us/products/nx/",
349           url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
350    }
351    @Misc{ VRML,
352            title = "VRML",
353           howpublished = "http://www.w3.org/MarkUp/VRML/",
354           url = "http://www.w3.org/MarkUp/VRML/"
355    }
356    @Misc{ STL,
357            title = "STL",
358           howpublished = "http://en.wikipedia.org/wiki/STL_(file_format)",
359           url = "http://en.wikipedia.org/wiki/STL_(file_format)"
360    }
361    @Misc{ NASTRAN,
362            title = "Nastran",
363           howpublished = "http://simcompanion.mscsoftware.com/",
364           url = "http://simcompanion.mscsoftware.com/"
365    }
366    @Misc{ MEDIT,
367            title = "Medit",
368           howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
369           url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
370    }
371    @Misc{ CGNS,
372            title = "CGNS",
373           howpublished = "http://cgns.sourceforge.net/",
374           url = "http://cgns.sourceforge.net/"
375    }
376    @Misc{ PLOT3D,
377            title = "Plot3D",
378           howpublished = "http://www.plot3d.net/",
379           url = "http://www.plot3d.net/"
380    }
381    @Misc{ DIFFPACK,
382            title = "Diffpack",
383           howpublished = "http://www.diffpack.com/",
384           url = "http://www.diffpack.com/"
385    }
386    
387    @InProceedings{lazyauspdc,
388    author = {Joel Fenwick and Lutz Gross},
389    title = {Lazy Evaluation of PDE Coefficients in the EScript System},
390    booktitle = {Parallel and Distributed Computing 2010 (AusPDC2010)},
391    pages = {71--76},
392    year = {2010},
393    editor = {Jinjun Chen and Rajiv Ranjan},
394    volume = {107},
395    series = {Conferences in Research and Practice in Information Technology},
396    month = {January},
397    issn = {1445-1336}
398    }
399    
 @BOOK{SAAD,  
   AUTHOR  = {Y. Saad},  
   EDITOR  = {},  
   TITLE   = {Iterative Methods for Sparse Linear Systems},  
   PUBLISHER = {PWS Publishing Company},  
   YEAR    = {1996},  
   SERIES  = {},  
   ADDRESS = {20 Park Plaza, Boston, MA 02116, USA},  
  NOTE    = {}   }  
   
 @BOOK{WEISS,  
   AUTHOR  = {R. Weiss},  
   TITLE   = {Parameter-Free Iterative Linear Solvers},  
   SERIES  = {Mathematical Research, vol.\ 97},  
   PUBLISHER = {Akademie Verlag},  
   YEAR    = {1996},  
   ADDRESS = {Berlin},  
   NOTE    = {}   }  
   
 % FEM stuff  
 @BOOK{NumHand,  
   AUTHOR  = {P.~G. Ciarlet and J.~L. Lions},  
   TITLE   = {Handbook of Numerical Analysis},  
   VOLUME  = {2},  
   YEAR    = {1991},  
   PUBLISHER = {North Holland},  
   ADDRESS = {Amsterdam},  
   NOTE    = {}   }  
   
 @INPROCEEDINGS{NUMARRAY,  
   AUTHOR={Perry Greenfield, Todd Miller, Jin-Chung Hsu and Richard L. White},  
   TITLE={An Array Module for Python},  
   EDITOR={},  
   BOOKTITLE={Astronomical Data Analysis Software and Systems XI},  
   PUBLISHER={ },YEAR={2001}}  
   
 @BOOK{Zienc,  
   AUTHOR  = {O.~C. Zienkiewicz},  
   TITLE   = {The Finite Element Method in Engineering Science},  
   PUBLISHER = {McGraw-Hill},  
   YEAR    = {1971},  
   ADDRESS = {London},  
   EDITION = {second},  
   NOTE    = {}   }  
   
 @ARTICLE{SUPG2,  
   AUTHOR  = {H.C. Elman and A. Ramage},  
   TITLE   = {An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation},  
   JOURNAL = {SIAM J. Numer. Anal.},  
   YEAR    = {2002},  
  VOLUME  = {40},  
  NUMBER  = {1},  
  PAGES   = {254--281}}  
   
 @Book{TURCOTTE2002,  
 author              = { Donald L. Turcotte and Gerald Schubert },  
 title               = {Geodynamics},  
 year                = 2002,  
 publisher           = { Cambridge University Press },  
 edition             = {Second}  
 }  
   
 @Article{MORESI2003,  
 author              = { L. Moresi and F. Dufour and H. \-B. M  
 {\"u}hlhaus },  
 title               = { A {Lagrangian} integration point finite element  
 method for  
                         large deformation modeling of viscoelastic  
 geomaterials  
 },  
 journal             = { Journal of Computational Physics },  
 number              = 184,  
 pages               = { 476--497 },  
 year                = 2003  
 }  
   
 @ARTICLE{GROSZ99c,  
   AUTHOR  = {L.~Grosz},  
   TITLE   = {Preconditioning by Incomplete Block Elimination},  
   JOURNAL = {J. of Num. Lin. Alg. with Appl.},  
   YEAR    = {2000},  
   NOTE    = {to appear}   }  
 % VOLUME  = {1},  
 % NUMBER  = {1},  
 % PAGES   = {3--17},  
   
 @BOOK{VTK,  
 AUTHOR  = {The Kitware, Inc},  
 TITLE={Visualization Toolkit User's Guide.},  
 PUBLISHER = {Kitware, Inc publishers.},  
 YEAR    = {1971},  
 ADDRESS = {London},  
 EDITION = {second},  
 NOTE    = {}   }  
   
 %level set stuff  
   
 @ARTICLE{BOURGOUIN2006,  
   AUTHOR  = {L. Bourgouin and H. Muhlhaus and A. J. Hale and A. Arsac},  
   TITLE   = {Towards realistic simulations of lava dome growth using the level set method},  
   JOURNAL = {Acta Geotechnica},  
   YEAR    = {2006},  
  VOLUME  = {1},  
  NUMBER  = {4},  
  PAGES   = {225--236}}  
   
   
 @ARTICLE{SUCKALE2008,  
   AUTHOR  = {J. Suckale and J. C. Have},  
   TITLE   = {An alternative numerical model of buoyancy driven flows},  
   JOURNAL = {},  
   YEAR    = {2008},  
  VOLUME  = {},  
  NUMBER  = {},  
  PAGES   = {1--43}}  
   
   
 @ARTICLE{GROSS2006,  
   AUTHOR  = {L. Gross and L. Bourgouin and A. J. Hale and H.-B Muhlhaus},  
   TITLE   = {Interface Modeling in Incompressible Media using Level Sets in Escipt},  
   JOURNAL = {Physics of the Earth and Planetary Interiors},  
   YEAR    = {2006},  
  VOLUME  = {163},  
  NUMBER  = {1-4},  
  PAGES   = {23--34}}  
   
   
 @ARTICLE{VANKEKEN1997,  
   AUTHOR  = {P. E. van Keken and S. D. King and H. Schmeling and U. R. Christensen and D. Neumeister and M. P. Doin},  
   TITLE   = {A comparison of methods for the modeling of thermochemical convection},  
   JOURNAL = {J. Geophys. Res.},  
   YEAR    = {1997},  
  VOLUME  = {102},  
  NUMBER  = {B10},  
  PAGES   = {22477--22495}}  
   
   
 %models  
   
   
 @ARTICLE{AAMIRBERKYAN2008,  
   AUTHOR  = {A. Amirberkyan and L. Gross},  
   TITLE   = {Efficient Solvers for Incopressible Fluid Flows in Geosciences},  
   JOURNAL = {},  
   YEAR    = {2008},  
  VOLUME  = {},  
  NUMBER  = {},  
  PAGES   = {}}  
   
   
 @ARTICLE{MBENZI2005,  
   AUTHOR  = {M. Benzi and G. H. Golub and J. Liesen},  
   TITLE   = {Numerical solution of saddle point problems},  
   JOURNAL = {Acta Numerica},  
   YEAR    = {2005},  
  VOLUME  = {14},  
  NUMBER  = {},  
  PAGES   = {1--137}}  

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