doc/user/esys.bib

@comment{x-kbibtex-personnameformatting=<%l><, %f>}

Created by Kbib version 0.6.5
#Last modified: Wed May 20 10:08:05 2009

@book{SAAD,
    address = "20 Park Plaza, Boston, MA 02116, USA",
    author = "Saad, Y.",
    publisher = "PWS Publishing Company",
    title = "{Iterative Methods for Sparse Linear Systems}",
    year = "1996"
}

@book{WEISS,
    address = "Berlin",
    author = "Weiss, R.",
    publisher = "Akademie Verlag",
    series = "{Mathematical Research, vol.\ 97}",
    title = "{Parameter-Free Iterative Linear Solvers}",
    year = "1996"
}

@book{Multigrid,
    author = "Trottenberg, U. and Oosterlee, C. W. and Sch{\"u}ller, A.",
    publisher = "Academic Press",
    title = "{Multigrid}",
    year = "2001"
}

@book{AMG,
    author = "Shapira, Y.",
    publisher = "Springer",
    title = "{Matrix-Based Multigrid}",
    year = "2008"
}

@book{NumHand,
    address = "Amsterdam",
    author = "Ciarlet, P.~G. and Lions, J.~L.",
    publisher = "North Holland",
    title = "{Handbook of Numerical Analysis}",
    volume = "2",
    year = "1991"
}

@book{Briggs2000, address = "Philadelphia, PA, USA", author = "William L. Briggs and Van Emden Henson and Steve F. McCormick", isbn = "0-89871-462-1", publisher = "Society for Industrial and Applied Mathematics", title = "{A Multigrid Tutorial: Second Edition}", year = "2000" } 

@article{Vanek1996, abstract = "An algebraic multigrid algorithm for symmetric, positive definite linear systems is developed based on the concept of prolongation by smoothed aggregation. Coarse levels are generated automatically. We present a set of requirements motivated heuristically by a convergence theory. The algorithm then attempts to satisfy the requirements. Input to the method are the coefficient matrix and zero energy modes, which are determined from nodal coordinates and knowledge of the differential equation. Efficiency of the resulting algorithm is demonstrated by computational results on real world problems from solid elasticity, plate bending, and shells.", author = "P. Van\v{e}k and J. Mandel and M. Brezina", doi = "10.1007/BF02238511", issn = "1436-5057", journal = "Computing", number = "3", pages = "179--196", title = "{Algebraic multigrid by smoothed aggregation for second and fourth order elliptic problems}", url = "http://dx.doi.org/10.1007/BF02238511", volume = "56", year = "1996" }


@article{Stuben2001281, author = "K. Stuben", doi = "10.1016/S0377-0427(00)00516-1", issn = "0377-0427", journal = "Journal of Computational and Applied Mathematics", keywords = "Algebraic multigrid", note = "Numerical Analysis 2000. Vol. VII: Partial Differential Equations", number = "1--2", pages = "281--309", title = "{A review of algebraic multigrid}", url = "http://www.sciencedirect.com/science/article/pii/S0377042700005161", volume = "128", year = "2001" } 

@inproceedings{Tuminaro2000, acmid = "370060", address = "Washington, DC, USA", articleno = "5", author = "Ray S. Tuminaro", booktitle = "{Proceedings of the 2000 ACM/IEEE Conference on Supercomputing}", isbn = "0-7803-9802-5", location = "Dallas, Texas, USA", publisher = "IEEE Computer Society", series = "{SC '00}", title = "{Parallel Smoothed Aggregation Multigrid: Aggregation Strategies on Massively Parallel Machines}", url = "http://dl.acm.org/citation.cfm?id=370049.370060", year = "2000" }

@inproceedings{NUMARRAY,
    author = "Miller, Todd and Hsu, Jin-Chung and Greenfield, Perry and White, Richard L.",
    booktitle = "{Astronomical Data Analysis Software and Systems XI}",
    title = "{An Array Module for Python}",
    year = "2001"
}

@book{Zienc,
    address = "London",
    author = "Zienkiewicz, O.~C.",
    edition = "second",
    publisher = "McGraw-Hill",
    title = "{The Finite Element Method in Engineering Science}",
    year = "1971"
}

@article{SUPG2,
    author = "Elman, H.C. and Ramage, A.",
    journal = "SIAM J. Numer. Anal.",
    number = "1",
    pages = "254--281",
    title = "{An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation}",
    volume = "40",
    year = "2002"
}

@book{TURCOTTE2002,
    author = "Turcotte, Donald L. and Schubert, Gerald",
    edition = "Second",
    publisher = "Cambridge University Press",
    title = "{Geodynamics}",
    year = 2002
}

@article{MORESI2003,
    author = "Moresi, L. and Dufour, F. and Muhlhaus, H.--B.",
    journal = "Journal of Computational Physics",
    number = 184,
    pages = "476--497",
    title = "{A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials}",
    year = 2003
}

@article{GROSZ99c,
    author = "L.~Grosz",
    journal = "J. of Num. Lin. Alg. with Appl.",
    note = "to appear",
    title = "{Preconditioning by Incomplete Block Elimination}",
    year = "2000"
}

@book{VTK,
    address = "London",
    author = "{The Kitware}, Inc",
    edition = "second",
    publisher = "Kitware, Inc publishers.",
    title = "{Visualization Toolkit User's Guide.}",
    year = "1971"
}

@article{BOURGOUIN2006,
    author = "Bourgouin, L. and Muhlhaus, H. and Hale, A. J. and Arsac, A.",
    journal = "Acta Geotechnica",
    number = "4",
    pages = "225--236",
    title = "{Towards realistic simulations of lava dome growth using the level set method}",
    volume = "1",
    year = "2006"
}

@article{SUSSMAN1994,
    author = "Sussman, M. and Smereka, P. and Osher, S.",
    journal = "Journal of Computational Physics",
    pages = "146--159",
    title = "{A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow}",
    volume = "114",
    year = "1994"
}

@article{LIN2005,
    author = "Lin, C. and Lee, H. and Lee, T. and Weber, L. J.",
    journal = "International Journal for Numerical Methods in Fluids",
    pages = "521--547",
    title = "{A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows}",
    volume = "49",
    year = "2005"
}

@article{SUCKALE2008,
    author = "Suckale, J. and Have, J. C.",
    pages = "1--43",
    title = "{An alternative numerical model of buoyancy driven flows}",
    year = "2008"
}

@article{GROSS2006,
    author = "Gross, L. and Bourgouin, L. and Hale, A. J. and Muhlhaus, H.-B",
    doi = "10.1016/j.pepi.2007.04.004",
    journal = "Physics of the Earth and Planetary Interiors",
    month = "Aug.",
    pages = "23--34",
    title = "{Interface Modeling in Incompressible Media using Level Sets in Escript}",
    volume = "163",
    year = 2007
}

@article{VANKEKEN1997,
    author = "{van Keken}, P. E. and King, S. D. and Schmeling, H. and Christensen, U. R. and Neumeister, D. and Doin, M. P.",
    journal = "J. Geophys. Res.",
    number = "B10",
    pages = "22477--22495",
    title = "{A comparison of methods for the modeling of thermochemical convection}",
    volume = "102",
    year = "1997"
}

@article{AAMIRBERKYAN2008,
    author = "Amirberkyan, A. and Gross, L.",
    journal = "ANZIAM Journal",
    pages = "C189--C203",
    title = "{Efficient Solvers for Incompressible Fluid Flows in Geosciences}",
    volume = "50",
    year = "2008"
}

@article{MBENZI2005,
    author = "Benzi, M. and Golub, G. H. and Liesen, J.",
    journal = "Acta Numerica",
    pages = "1--137",
    title = "{Numerical solution of saddle point problems}",
    volume = "14",
    year = "2005"
}

@misc{OPENDX,
    howpublished = "http://www.opendx.org/",
    key = "opendx",
    title = "{OpenDX}",
    url = "http://www.opendx.org/"
}

@misc{netCDF,
    howpublished = "http://www.unidata.ucar.edu/software/netcdf",
    key = "netcdf",
    title = "{netCDF}",
    url = "http://www.unidata.ucar.edu/software/netcdf"
}

@article{UMFPACK,
    author = "Davis, Timothy A.",
    issue = 2,
    journal = "ACM Transactions on Mathematical Software (TOMS)",
    pages = "196--199",
    title = "{Algorithm 832: UMFPACK V4.3---an unsymmetric-pattern multifrontal method}",
    url = "http://www.cise.ufl.edu/research/sparse/umfpack/",
    volume = 30,
    year = 2004
}

@misc{MKL,
    key = "MKL",
    title = "{INTEL's Math Kernel Library}"
}

@misc{VisIt,
    howpublished = "https://wci.llnl.gov/codes/visit/home.html",
    key = "visit",
    title = "{VisIt homepage}",
    url = "https://wci.llnl.gov/codes/visit/home.html"
}

@misc{TrilinosWeb,
    howpublished = "https://trilinos.github.io/",
    key = "Trilinos",
    title = "{Trilinos homepage}",
    url = "https://trilinos.github.io/"
}

@misc{Sympy,
    howpublished = "http://sympy.org/en/index.html",
    key = "Sympy",
    title = "{Sympy homepage}",
    url = "http://sympy.org/en/index.html"
}

@misc{OPENMP,
    howpublished = "http://openmp.org",
    key = "openmp",
    title = "{OpenMP}",
    url = "http://openmp.org"
}

@misc{MPI,
    howpublished = "http://www.mpi-forum.org",
    key = "mpi",
    title = "{MPI}",
    url = "http://www.mpi-forum.org"
}

@book{LBB,
    author = "Girault, V. and Raviart, P. A.",
    publisher = "Springer Verlag, Berlin",
    title = "{Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms}",
    year = 1986
}

@misc{SCSL,
    title = "{SCSL (Scientific Computing Software Library)}",
    url = "http://www.sgi.com/products/software/irix/scsl.html"
}

@manual{GMSH,
    author = "Geuzaine, Christophe and Remacle, Jean-Francois",
    edition = "1.12",
    month = "Aug",
    title = "{Gmsh Reference Manual}",
    url = "http://www.geuz.org/gmsh",
    year = 2003
}

@article{RILU,
    author = "Suchomel, B. and Saad, Y.",
    journal = "Numerical Linear Algebra with Applications",
    number = 5,
    pages = "1099--1506",
    title = "{ARMS: an algebraic recursive multilevel solver for general sparse linear systems}",
    volume = "9",
    year = 2002
}

@article{Trilinos,
    address = "New York, NY, USA",
    author = "Heroux, Michael A. and Bartlett, Roscoe A. and Howle, Vicki E. and Hoekstra, Robert J. and Hu, Jonathan J. and Kolda, Tamara G. and Lehoucq, Richard B. and Long, Kevin R. and Pawlowski, Roger P. and Phipps, Eric T. and Salinger, Andrew G. and Thornquist, Heidi K. and Tuminaro, Ray S. and Willenbring, James M. and Williams, Alan and Stanley, Kendall S.",
    journal = "ACM Trans. Math. Softw.",
    number = "3",
    pages = "397--423",
    publisher = "ACM Press",
    title = "{An overview of the Trilinos project}",
    volume = "31",
    year = "2005"
}

@article{SuperLU,
    author = "Demmel, James W. and Eisenstat, Stanley C. and Gilbert, John R. and Li, Xiaoye S. and Liu, Joseph W. H.",
    journal = "SIAM J. Matrix Analysis and Applications",
    number = "3",
    pages = "720--755",
    title = "{A supernodal approach to sparse partial pivoting}",
    volume = "20",
    year = "1999"
}

@misc{RIGHTHANDRULE,
    howpublished = "http://en.wikipedia.org/wiki/Right-hand\_rule",
    key = "RHR",
    title = "{Right-hand rule}",
    url = "http://en.wikipedia.org/wiki/Right-hand_rule"
}

@misc{TETGEN,
    author = "Si, Hang",
    howpublished = "http://tetgen.berlios.de",
    month = "Jan",
    title = "{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator}",
    url = "http://tetgen.berlios.de",
    year = 2008
}

@misc{NETGEN,
    author = "Edwards, Tim",
    howpublished = "http://opencircuitdesign.com/netgen/",
    title = "{Netgen 1.4}",
    url = "http://opencircuitdesign.com/netgen/"
}

@article{ELMAN,
    author = "Silvester, David and Elman, Howard and Kay, David and Wathen, Andrew",
    doi = "10.1016/S0377-0427(00)00515-X",
    issn = "0377-0427",
    journal = "Journal of Computational and Applied Mathematics",
    keywords = "Navier-Stokes equations; Incompressible flow; Preconditioning; Multigrid iteration",
    note = "",
    number = "1--2",
    pages = "261--279",
    title = "{Efficient preconditioning of the linearized Navier-Stokes equations for incompressible flow}",
    url = "http://www.sciencedirect.com/science/article/pii/S037704270000515X",
    volume = "128",
    year = "2001"
}

@article{LEASTSQUARESFEM1994,
    author = "Pehlivanov, A. I. and Carey, G. F. and Lazarov, R. D.",
    journal = "SIAM Journal on Numerical Analysis",
    month = "October",
    number = 5,
    pages = "1368--1377",
    title = "{Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems}",
    volume = "31",
    year = 1994
}

@article{Muhlhaus2005,
    author = "Muhlhaus, Hans-Bernd and Regenauer-Lieb, Klaus",
    journal = "Geophysical Journal International",
    month = "November",
    number = 2,
    pages = "788--800(13)",
    title = "{Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection}",
    volume = "163",
    year = 2005
}

@manual{NUMPY,
    author = "Community, Scipy",
    howpublished = "http://docs.scipy.org/doc/",
    title = "{Numpy and Scipy Documentation}",
    url = "http://docs.scipy.org/doc/"
}

@manual{matplotlib,
    author = "Hunter, John and Droettboom, Michael and Dale, Darren",
    howpublished = "http://matplotlib.sourceforge.net/",
    month = "July",
    title = "{matplotlib}",
    url = "http://matplotlib.sourceforge.net/",
    year = "2009"
}

@manual{mayavi,
    howpublished = "http://docs.enthought.com/mayavi/mayavi",
    key = "mayavi",
    title = "{Mayavi: 3D scientific data visualization and plotting in Python}",
    year = "2015",
    url = "http://docs.enthought.com/mayavi/mayavi"
}

@misc{gnuplot,
    author = "Williams, Thomas and Kelley, Colin",
    howpublished = "http://www.gnuplot.info/",
    month = mar,
    title = "{gnuplot homepage}",
    url = "http://www.gnuplot.info/",
    year = "2009"
}

@manual{SCIPY,
    author = "{The Scipy community}",
    howpublished = "http://docs.scipy.org/doc/",
    title = "{Numpy and Scipy Documentation}",
    url = "http://docs.scipy.org/doc/"
}

@misc{SCSL,
    howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
    title = "{SCSL (Scientific Computing Software Library)}",
    url = "http://www.sgi.com/products/software/irix/scsl.html"
}

@misc{IDEAS,
    howpublished = "http://www.plm.automation.siemens.com/en\\\_us/products/nx/",
    key = "IDEAS",
    title = "{I\_DEAS}",
    url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
}

@misc{VRML,
    howpublished = "http://www.w3.org/MarkUp/VRML/",
    key = "VRML",
    title = "{VRML}",
    url = "http://www.w3.org/MarkUp/VRML/"
}

@misc{STL,
    howpublished = "http://en.wikipedia.org/wiki/STL\_(file\_format)",
    key = "STL",
    title = "{STL}",
    url = "http://en.wikipedia.org/wiki/STL_(file_format)"
}

@misc{NASTRAN,
    howpublished = "http://simcompanion.mscsoftware.com/",
    key = "NASTRAN",
    title = "{Nastran}",
    url = "http://simcompanion.mscsoftware.com/"
}

@misc{MEDIT,
    howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
    key = "medit",
    title = "{Medit}",
    url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
}

@misc{CGNS,
    howpublished = "http://cgns.sourceforge.net/",
    key = "cgns",
    title = "{CGNS}",
    url = "http://cgns.sourceforge.net/"
}

@misc{PLOT3D,
    howpublished = "http://www.plot3d.net/",
    key = "plot3d",
    title = "{Plot3D}",
    url = "http://www.plot3d.net/"
}

@misc{DIFFPACK,
    howpublished = "http://www.diffpack.com/",
    key = "diffpack",
    title = "{Diffpack}",
    url = "http://www.diffpack.com/"
}

@misc{GOCAD,
    howpublished = "\url{http://www.pdgm.com/Products/GOCAD}",
    key = "gocad",
    title = "{Paradigm GOCAD homepage}",
    url = "http://www.pdgm.com/Products/GOCAD"
}

@inproceedings{lazyauspdc,
    author = "Fenwick, Joel and Gross, Lutz",
    booktitle = "{Parallel and Distributed Computing 2010 (AusPDC2010)}",
    editor = "Chen, Jinjun and Ranjan, Rajiv",
    issn = "1445-1336",
    month = "January",
    pages = "71--76",
    series = "{Conferences in Research and Practice in Information Technology}",
    title = "{Lazy Evaluation of PDE Coefficients in the EScript System}",
    volume = "107",
    year = "2010"
}

@inproceedings{LoulaCorrea2006a,
    author = "Loula, Abimael F. D. and Correa, Maicon R.",
    booktitle = "{III European Conference on Computational Mechanics Solids, Structures and Coupled Problems in Engineering }",
    editor = "Soares, C.A. Mota and others",
    localfile = "LoulaCorrea2006a.pdf",
    title = "{NUMERICAL ANALYSIS OF STABILIZED MIXED FINITE ELEMENT METHODS FOR DARCY FLOW }",
    year = "2006"
}

@article{MasudHughes2002a,
    author = "Masud, Arif and Hughes, Thomas J.R.",
    journal = "Comput. Methods Appl. Mech. Engrg.",
    localfile = "MasudHughes2002a.pdf",
    number = "191",
    pages = "4341--4370",
    title = "{A stabilized mixed finite element method for Darcy flowArif Masud }",
    year = "2002"
}

@book{Kelley2004a,
    author = "Kelley, C. T.",
    publisher = "Cambridge University Press",
    series = "{Frontiers in Applied Mathematics}",
    title = "{Iterative Methods for Linear and Nonlinear Equations}",
    volume = "18",
    year = 2004
}

@article{Schoenauer1981a,
    author = "Sch{\"o}nauer, W. and Raith, K. and Glotz, G.",
    journal = "Computer Methods in Applied Mechanics and Engineering",
    pages = "327--359",
    title = "{The principle of the difference of difference quotients as a key to the selfadaptive solution of nonlinear partial differential equations}",
    volume = "28",
    year = "1981"
}

@misc{gaussfilter,
    howpublished = "\url{http://en.wikipedia.org/wiki/Gaussian\_blur}",
    key = "{WikiGaussianBlur}",
    title = "{Gaussian blur}",
    url = "http://en.wikipedia.org/wiki/Gaussian_blur",
    urldate = "20130221"
}

1	gross	5670	@comment{x-kbibtex-personnameformatting=<%l><, %f>}
2
3	gross	2484	Created by Kbib version 0.6.5
4	gross	5670	#Last modified: Wed May 20 10:08:05 2009
5	jgs	102
6	gross	5670	@book{SAAD,
7			address = "20 Park Plaza, Boston, MA 02116, USA",
8			author = "Saad, Y.",
9			publisher = "PWS Publishing Company",
10	gross	3502	title = "{Iterative Methods for Sparse Linear Systems}",
11	gross	5670	year = "1996"
12	gross	2371	}
13	jfenwick	1966
14	gross	5670	@book{WEISS,
15			address = "Berlin",
16			author = "Weiss, R.",
17	gross	2484	publisher = "Akademie Verlag",
18	gross	3502	series = "{Mathematical Research, vol.\ 97}",
19	gross	5670	title = "{Parameter-Free Iterative Linear Solvers}",
20			year = "1996"
21	jfenwick	1966	}
22
23	gross	5670	@book{Multigrid,
24			author = "Trottenberg, U. and Oosterlee, C. W. and Sch{\"u}ller, A.",
25			publisher = "Academic Press",
26	gross	3502	title = "{Multigrid}",
27	artak	2976	year = "2001"
28			}
29
30	gross	5670	@book{AMG,
31			author = "Shapira, Y.",
32			publisher = "Springer",
33	gross	3502	title = "{Matrix-Based Multigrid}",
34	gross	2484	year = "2008"
35	gross	2371	}
36	jgs	102
37	gross	5670	@book{NumHand,
38			address = "Amsterdam",
39			author = "Ciarlet, P.~G. and Lions, J.~L.",
40			publisher = "North Holland",
41	gross	3502	title = "{Handbook of Numerical Analysis}",
42	gross	2484	volume = "2",
43	gross	5670	year = "1991"
44	gross	2371	}
45	jgs	102
46	acodd	6928	@book{Briggs2000, address = "Philadelphia, PA, USA", author = "William L. Briggs and Van Emden Henson and Steve F. McCormick", isbn = "0-89871-462-1", publisher = "Society for Industrial and Applied Mathematics", title = "{A Multigrid Tutorial: Second Edition}", year = "2000" }
47
48			@article{Vanek1996, abstract = "An algebraic multigrid algorithm for symmetric, positive definite linear systems is developed based on the concept of prolongation by smoothed aggregation. Coarse levels are generated automatically. We present a set of requirements motivated heuristically by a convergence theory. The algorithm then attempts to satisfy the requirements. Input to the method are the coefficient matrix and zero energy modes, which are determined from nodal coordinates and knowledge of the differential equation. Efficiency of the resulting algorithm is demonstrated by computational results on real world problems from solid elasticity, plate bending, and shells.", author = "P. Van\v{e}k and J. Mandel and M. Brezina", doi = "10.1007/BF02238511", issn = "1436-5057", journal = "Computing", number = "3", pages = "179--196", title = "{Algebraic multigrid by smoothed aggregation for second and fourth order elliptic problems}", url = "http://dx.doi.org/10.1007/BF02238511", volume = "56", year = "1996" }
49
50
51
52			@article{Stuben2001281, author = "K. Stuben", doi = "10.1016/S0377-0427(00)00516-1", issn = "0377-0427", journal = "Journal of Computational and Applied Mathematics", keywords = "Algebraic multigrid", note = "Numerical Analysis 2000. Vol. VII: Partial Differential Equations", number = "1--2", pages = "281--309", title = "{A review of algebraic multigrid}", url = "http://www.sciencedirect.com/science/article/pii/S0377042700005161", volume = "128", year = "2001" }
53
54			@inproceedings{Tuminaro2000, acmid = "370060", address = "Washington, DC, USA", articleno = "5", author = "Ray S. Tuminaro", booktitle = "{Proceedings of the 2000 ACM/IEEE Conference on Supercomputing}", isbn = "0-7803-9802-5", location = "Dallas, Texas, USA", publisher = "IEEE Computer Society", series = "{SC '00}", title = "{Parallel Smoothed Aggregation Multigrid: Aggregation Strategies on Massively Parallel Machines}", url = "http://dl.acm.org/citation.cfm?id=370049.370060", year = "2000" }
55
56	gross	5670	@inproceedings{NUMARRAY,
57			author = "Miller, Todd and Hsu, Jin-Chung and Greenfield, Perry and White, Richard L.",
58			booktitle = "{Astronomical Data Analysis Software and Systems XI}",
59	gross	3502	title = "{An Array Module for Python}",
60	gross	2484	year = "2001"
61	jgs	113	}
62
63	gross	5670	@book{Zienc,
64			address = "London",
65			author = "Zienkiewicz, O.~C.",
66			edition = "second",
67			publisher = "McGraw-Hill",
68	gross	3502	title = "{The Finite Element Method in Engineering Science}",
69	gross	5670	year = "1971"
70	gross	2371	}
71
72	gross	5670	@article{SUPG2,
73			author = "Elman, H.C. and Ramage, A.",
74			journal = "SIAM J. Numer. Anal.",
75			number = "1",
76			pages = "254--281",
77	gross	3502	title = "{An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation}",
78	gross	2484	volume = "40",
79	gross	5670	year = "2002"
80	gross	2371	}
81
82	gross	5670	@book{TURCOTTE2002,
83			author = "Turcotte, Donald L. and Schubert, Gerald",
84			edition = "Second",
85			publisher = "Cambridge University Press",
86	gross	3502	title = "{Geodynamics}",
87	gross	5670	year = 2002
88	gross	2371	}
89
90	gross	5670	@article{MORESI2003,
91			author = "Moresi, L. and Dufour, F. and Muhlhaus, H.--B.",
92	gross	2484	journal = "Journal of Computational Physics",
93	gross	5670	number = 184,
94	gross	3502	pages = "476--497",
95	gross	5670	title = "{A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials}",
96	gross	3502	year = 2003
97	jgs	113	}
98
99	gross	5670	@article{GROSZ99c,
100	gross	2484	author = "L.~Grosz",
101	gross	5670	journal = "J. of Num. Lin. Alg. with Appl.",
102			note = "to appear",
103	gross	3502	title = "{Preconditioning by Incomplete Block Elimination}",
104	gross	5670	year = "2000"
105	gross	2371	}
106	lgraham	1700
107	gross	5670	@book{VTK,
108			address = "London",
109			author = "{The Kitware}, Inc",
110			edition = "second",
111			publisher = "Kitware, Inc publishers.",
112	gross	3502	title = "{Visualization Toolkit User's Guide.}",
113	gross	5670	year = "1971"
114	gross	2371	}
115	lgraham	1700
116	gross	5670	@article{BOURGOUIN2006,
117			author = "Bourgouin, L. and Muhlhaus, H. and Hale, A. J. and Arsac, A.",
118			journal = "Acta Geotechnica",
119			number = "4",
120			pages = "225--236",
121	gross	3502	title = "{Towards realistic simulations of lava dome growth using the level set method}",
122	gross	2484	volume = "1",
123	gross	5670	year = "2006"
124	gross	2371	}
125	lgraham	2115
126	gross	5670	@article{SUSSMAN1994,
127			author = "Sussman, M. and Smereka, P. and Osher, S.",
128			journal = "Journal of Computational Physics",
129			pages = "146--159",
130	gross	3502	title = "{A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow}",
131	gross	2484	volume = "114",
132	gross	5670	year = "1994"
133	gross	2371	}
134	lgraham	2115
135	gross	5670	@article{LIN2005,
136			author = "Lin, C. and Lee, H. and Lee, T. and Weber, L. J.",
137			journal = "International Journal for Numerical Methods in Fluids",
138			pages = "521--547",
139	gross	3502	title = "{A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows}",
140	gross	2484	volume = "49",
141	gross	5670	year = "2005"
142	gross	2371	}
143	lgraham	1700
144	gross	5670	@article{SUCKALE2008,
145			author = "Suckale, J. and Have, J. C.",
146			pages = "1--43",
147	gross	3502	title = "{An alternative numerical model of buoyancy driven flows}",
148	gross	5670	year = "2008"
149	gross	2371	}
150	lgraham	1700
151	gross	5670	@article{GROSS2006,
152			author = "Gross, L. and Bourgouin, L. and Hale, A. J. and Muhlhaus, H.-B",
153			doi = "10.1016/j.pepi.2007.04.004",
154			journal = "Physics of the Earth and Planetary Interiors",
155			month = "Aug.",
156			pages = "23--34",
157	gross	3502	title = "{Interface Modeling in Incompressible Media using Level Sets in Escript}",
158	gross	2484	volume = "163",
159	gross	5670	year = 2007
160	gross	2371	}
161	lgraham	1700
162	gross	5670	@article{VANKEKEN1997,
163			author = "{van Keken}, P. E. and King, S. D. and Schmeling, H. and Christensen, U. R. and Neumeister, D. and Doin, M. P.",
164			journal = "J. Geophys. Res.",
165			number = "B10",
166			pages = "22477--22495",
167	gross	3502	title = "{A comparison of methods for the modeling of thermochemical convection}",
168	gross	2484	volume = "102",
169	gross	5670	year = "1997"
170	gross	2371	}
171	lgraham	1700
172	gross	5670	@article{AAMIRBERKYAN2008,
173			author = "Amirberkyan, A. and Gross, L.",
174			journal = "ANZIAM Journal",
175			pages = "C189--C203",
176	gross	3502	title = "{Efficient Solvers for Incompressible Fluid Flows in Geosciences}",
177	gross	2484	volume = "50",
178	gross	5670	year = "2008"
179	gross	2371	}
180	lgraham	1700
181	gross	5670	@article{MBENZI2005,
182			author = "Benzi, M. and Golub, G. H. and Liesen, J.",
183			journal = "Acta Numerica",
184			pages = "1--137",
185	gross	3502	title = "{Numerical solution of saddle point problems}",
186	gross	2484	volume = "14",
187	gross	5670	year = "2005"
188	gross	2371	}
189	jfenwick	1966
190	gross	5670	@misc{OPENDX,
191			howpublished = "http://www.opendx.org/",
192	gross	2484	key = "opendx",
193			title = "{OpenDX}",
194			url = "http://www.opendx.org/"
195	gross	2371	}
196	jfenwick	1966
197	gross	5670	@misc{netCDF,
198			howpublished = "http://www.unidata.ucar.edu/software/netcdf",
199	gross	2484	key = "netcdf",
200			title = "{netCDF}",
201			url = "http://www.unidata.ucar.edu/software/netcdf"
202	jfenwick	1966	}
203
204	gross	5670	@article{UMFPACK,
205			author = "Davis, Timothy A.",
206			issue = 2,
207			journal = "ACM Transactions on Mathematical Software (TOMS)",
208			pages = "196--199",
209			title = "{Algorithm 832: UMFPACK V4.3---an unsymmetric-pattern multifrontal method}",
210			url = "http://www.cise.ufl.edu/research/sparse/umfpack/",
211			volume = 30,
212			year = 2004
213	jfenwick	1966	}
214
215	gross	5670	@misc{MKL,
216	gross	2484	key = "MKL",
217	gross	3502	title = "{INTEL's Math Kernel Library}"
218	jfenwick	1966	}
219
220	gross	5670	@misc{VisIt,
221			howpublished = "https://wci.llnl.gov/codes/visit/home.html",
222	gross	2484	key = "visit",
223	caltinay	3367	title = "{VisIt homepage}",
224	gross	2484	url = "https://wci.llnl.gov/codes/visit/home.html"
225	jfenwick	1966	}
226
227	acodd	6927	@misc{TrilinosWeb,
228			howpublished = "https://trilinos.github.io/",
229			key = "Trilinos",
230			title = "{Trilinos homepage}",
231			url = "https://trilinos.github.io/"
232			}
233
234	gross	5670	@misc{Sympy,
235			howpublished = "http://sympy.org/en/index.html",
236	jduplessis	4880	key = "Sympy",
237			title = "{Sympy homepage}",
238			url = "http://sympy.org/en/index.html"
239			}
240
241	gross	5670	@misc{OPENMP,
242			howpublished = "http://openmp.org",
243	gross	2484	key = "openmp",
244			title = "{OpenMP}",
245			url = "http://openmp.org"
246	lgraham	2128	}
247
248	gross	5670	@misc{MPI,
249			howpublished = "http://www.mpi-forum.org",
250	gross	2484	key = "mpi",
251			title = "{MPI}",
252			url = "http://www.mpi-forum.org"
253	jfenwick	2331	}
254
255	gross	5670	@book{LBB,
256			author = "Girault, V. and Raviart, P. A.",
257			publisher = "Springer Verlag, Berlin",
258	gross	3502	title = "{Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms}",
259	gross	2484	year = 1986
260	gross	2371	}
261
262	gross	5670	@misc{SCSL,
263	gross	3502	title = "{SCSL (Scientific Computing Software Library)}",
264	gross	2484	url = "http://www.sgi.com/products/software/irix/scsl.html"
265	gross	2371	}
266
267	gross	5670	@manual{GMSH,
268			author = "Geuzaine, Christophe and Remacle, Jean-Francois",
269	gross	2484	edition = "1.12",
270			month = "Aug",
271	gross	5670	title = "{Gmsh Reference Manual}",
272			url = "http://www.geuz.org/gmsh",
273			year = 2003
274	gross	2371	}
275
276	gross	5670	@article{RILU,
277			author = "Suchomel, B. and Saad, Y.",
278	gross	2484	journal = "Numerical Linear Algebra with Applications",
279	gross	5670	number = 5,
280	gross	3502	pages = "1099--1506",
281	gross	5670	title = "{ARMS: an algebraic recursive multilevel solver for general sparse linear systems}",
282	gross	2484	volume = "9",
283	gross	3502	year = 2002
284	gross	2371	}
285
286	gross	5670	@article{Trilinos,
287			address = "New York, NY, USA",
288			author = "Heroux, Michael A. and Bartlett, Roscoe A. and Howle, Vicki E. and Hoekstra, Robert J. and Hu, Jonathan J. and Kolda, Tamara G. and Lehoucq, Richard B. and Long, Kevin R. and Pawlowski, Roger P. and Phipps, Eric T. and Salinger, Andrew G. and Thornquist, Heidi K. and Tuminaro, Ray S. and Willenbring, James M. and Williams, Alan and Stanley, Kendall S.",
289	gross	3502	journal = "ACM Trans. Math. Softw.",
290			number = "3",
291			pages = "397--423",
292			publisher = "ACM Press",
293	gross	5670	title = "{An overview of the Trilinos project}",
294			volume = "31",
295			year = "2005"
296	caltinay	3316	}
297
298	gross	5670	@article{SuperLU,
299			author = "Demmel, James W. and Eisenstat, Stanley C. and Gilbert, John R. and Li, Xiaoye S. and Liu, Joseph W. H.",
300			journal = "SIAM J. Matrix Analysis and Applications",
301			number = "3",
302			pages = "720--755",
303	gross	3502	title = "{A supernodal approach to sparse partial pivoting}",
304			volume = "20",
305	gross	5670	year = "1999"
306	caltinay	3316	}
307
308	gross	5670	@misc{RIGHTHANDRULE,
309			howpublished = "http://en.wikipedia.org/wiki/Right-hand\_rule",
310			key = "RHR",
311	gross	3502	title = "{Right-hand rule}",
312	gross	2484	url = "http://en.wikipedia.org/wiki/Right-hand_rule"
313	gross	2371	}
314
315	gross	5670	@misc{TETGEN,
316			author = "Si, Hang",
317			howpublished = "http://tetgen.berlios.de",
318			month = "Jan",
319	gross	3502	title = "{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator}",
320	gross	5670	url = "http://tetgen.berlios.de",
321			year = 2008
322	gross	2371	}
323
324	gross	5670	@misc{NETGEN,
325			author = "Edwards, Tim",
326			howpublished = "http://opencircuitdesign.com/netgen/",
327	gross	3502	title = "{Netgen 1.4}",
328	gross	2484	url = "http://opencircuitdesign.com/netgen/"
329	gross	2371	}
330
331	gross	5670	@article{ELMAN,
332			author = "Silvester, David and Elman, Howard and Kay, David and Wathen, Andrew",
333			doi = "10.1016/S0377-0427(00)00515-X",
334			issn = "0377-0427",
335			journal = "Journal of Computational and Applied Mathematics",
336			keywords = "Navier-Stokes equations; Incompressible flow; Preconditioning; Multigrid iteration",
337			note = "",
338			number = "1--2",
339			pages = "261--279",
340			title = "{Efficient preconditioning of the linearized Navier-Stokes equations for incompressible flow}",
341			url = "http://www.sciencedirect.com/science/article/pii/S037704270000515X",
342			volume = "128",
343			year = "2001"
344	gross	2371	}
345
346	gross	5670	@article{LEASTSQUARESFEM1994,
347			author = "Pehlivanov, A. I. and Carey, G. F. and Lazarov, R. D.",
348	gross	2484	journal = "SIAM Journal on Numerical Analysis",
349	gross	5670	month = "October",
350	gross	2371	number = 5,
351	gross	2484	pages = "1368--1377",
352	gross	5670	title = "{Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems}",
353			volume = "31",
354			year = 1994
355	gross	2371	}
356
357	gross	5670	@article{Muhlhaus2005,
358			author = "Muhlhaus, Hans-Bernd and Regenauer-Lieb, Klaus",
359	gross	2484	journal = "Geophysical Journal International",
360	gross	5670	month = "November",
361			number = 2,
362	gross	3502	pages = "788--800(13)",
363	gross	5670	title = "{Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection}",
364	gross	2484	volume = "163",
365	gross	3502	year = 2005
366	gross	2484	}
367	gross	2371
368	gross	5670	@manual{NUMPY,
369			author = "Community, Scipy",
370			howpublished = "http://docs.scipy.org/doc/",
371	gross	3502	title = "{Numpy and Scipy Documentation}",
372	gross	5670	url = "http://docs.scipy.org/doc/"
373	gross	2371	}
374
375	gross	5670	@manual{matplotlib,
376			author = "Hunter, John and Droettboom, Michael and Dale, Darren",
377			howpublished = "http://matplotlib.sourceforge.net/",
378			month = "July",
379	gross	3502	title = "{matplotlib}",
380	gross	5670	url = "http://matplotlib.sourceforge.net/",
381			year = "2009"
382	gross	2574	}
383
384	gross	5670	@manual{mayavi,
385	caltinay	5674	howpublished = "http://docs.enthought.com/mayavi/mayavi",
386	gross	5670	key = "mayavi",
387	caltinay	5662	title = "{Mayavi: 3D scientific data visualization and plotting in Python}",
388			year = "2015",
389			url = "http://docs.enthought.com/mayavi/mayavi"
390	gross	2574	}
391
392	gross	5670	@misc{gnuplot,
393			author = "Williams, Thomas and Kelley, Colin",
394			howpublished = "http://www.gnuplot.info/",
395			month = mar,
396	gross	3502	title = "{gnuplot homepage}",
397	gross	5670	url = "http://www.gnuplot.info/",
398			year = "2009"
399	gross	2580	}
400
401	gross	5670	@manual{SCIPY,
402	caltinay	5674	author = "{The Scipy community}",
403	gross	5670	howpublished = "http://docs.scipy.org/doc/",
404	gross	3502	title = "{Numpy and Scipy Documentation}",
405	gross	2580	url = "http://docs.scipy.org/doc/"
406			}
407
408	gross	5670	@misc{SCSL,
409			howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
410	gross	3502	title = "{SCSL (Scientific Computing Software Library)}",
411			url = "http://www.sgi.com/products/software/irix/scsl.html"
412	gross	2717	}
413
414	gross	5670	@misc{IDEAS,
415			howpublished = "http://www.plm.automation.siemens.com/en\\\_us/products/nx/",
416			key = "IDEAS",
417	gross	3502	title = "{I\_DEAS}",
418			url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
419	gross	2717	}
420	gross	3502
421	gross	5670	@misc{VRML,
422			howpublished = "http://www.w3.org/MarkUp/VRML/",
423			key = "VRML",
424	gross	3502	title = "{VRML}",
425			url = "http://www.w3.org/MarkUp/VRML/"
426	gross	2717	}
427	gross	3502
428	gross	5670	@misc{STL,
429			howpublished = "http://en.wikipedia.org/wiki/STL\_(file\_format)",
430			key = "STL",
431	gross	3502	title = "{STL}",
432			url = "http://en.wikipedia.org/wiki/STL_(file_format)"
433	gross	2717	}
434	gross	3502
435	gross	5670	@misc{NASTRAN,
436			howpublished = "http://simcompanion.mscsoftware.com/",
437			key = "NASTRAN",
438	gross	3502	title = "{Nastran}",
439			url = "http://simcompanion.mscsoftware.com/"
440	gross	2717	}
441	gross	3502
442	gross	5670	@misc{MEDIT,
443			howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
444			key = "medit",
445	gross	3502	title = "{Medit}",
446			url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
447	gross	2717	}
448	gross	3502
449	gross	5670	@misc{CGNS,
450			howpublished = "http://cgns.sourceforge.net/",
451			key = "cgns",
452	gross	3502	title = "{CGNS}",
453			url = "http://cgns.sourceforge.net/"
454	gross	2717	}
455	gross	3502
456	gross	5670	@misc{PLOT3D,
457			howpublished = "http://www.plot3d.net/",
458			key = "plot3d",
459	gross	3502	title = "{Plot3D}",
460			url = "http://www.plot3d.net/"
461	gross	2717	}
462	gross	3502
463	gross	5670	@misc{DIFFPACK,
464			howpublished = "http://www.diffpack.com/",
465			key = "diffpack",
466	gross	3502	title = "{Diffpack}",
467			url = "http://www.diffpack.com/"
468	gross	2717	}
469	gross	3502
470	gross	5670	@misc{GOCAD,
471			howpublished = "\url{http://www.pdgm.com/Products/GOCAD}",
472			key = "gocad",
473			title = "{Paradigm GOCAD homepage}",
474			url = "http://www.pdgm.com/Products/GOCAD"
475	caltinay	4455	}
476
477	gross	5670	@inproceedings{lazyauspdc,
478			author = "Fenwick, Joel and Gross, Lutz",
479	gross	3502	booktitle = "{Parallel and Distributed Computing 2010 (AusPDC2010)}",
480	gross	5670	editor = "Chen, Jinjun and Ranjan, Rajiv",
481			issn = "1445-1336",
482			month = "January",
483	gross	3502	pages = "71--76",
484	gross	5670	series = "{Conferences in Research and Practice in Information Technology}",
485			title = "{Lazy Evaluation of PDE Coefficients in the EScript System}",
486	gross	3502	volume = "107",
487	gross	5670	year = "2010"
488	jfenwick	2923	}
489	gross	2717
490	gross	5670	@inproceedings{LoulaCorrea2006a,
491			author = "Loula, Abimael F. D. and Correa, Maicon R.",
492			booktitle = "{III European Conference on Computational Mechanics Solids, Structures and Coupled Problems in Engineering }",
493			editor = "Soares, C.A. Mota and others",
494			localfile = "LoulaCorrea2006a.pdf",
495	gross	3502	title = "{NUMERICAL ANALYSIS OF STABILIZED MIXED FINITE ELEMENT METHODS FOR DARCY FLOW }",
496	gross	5670	year = "2006"
497	gross	3502	}
498
499	gross	5670	@article{MasudHughes2002a,
500			author = "Masud, Arif and Hughes, Thomas J.R.",
501	gross	3502	journal = "Comput. Methods Appl. Mech. Engrg.",
502	gross	5670	localfile = "MasudHughes2002a.pdf",
503			number = "191",
504	gross	3502	pages = "4341--4370",
505	gross	5670	title = "{A stabilized mixed finite element method for Darcy flowArif Masud }",
506			year = "2002"
507	gross	3502	}
508
509	gross	5670	@book{Kelley2004a,
510			author = "Kelley, C. T.",
511			publisher = "Cambridge University Press",
512			series = "{Frontiers in Applied Mathematics}",
513	gross	4052	title = "{Iterative Methods for Linear and Nonlinear Equations}",
514	gross	5670	volume = "18",
515	gross	4052	year = 2004
516			}
517
518	gross	5670	@article{Schoenauer1981a,
519			author = "Sch{\"o}nauer, W. and Raith, K. and Glotz, G.",
520			journal = "Computer Methods in Applied Mechanics and Engineering",
521			pages = "327--359",
522			title = "{The principle of the difference of difference quotients as a key to the selfadaptive solution of nonlinear partial differential equations}",
523			volume = "28",
524			year = "1981"
525	gross	4052	}
526
527	gross	5670	@misc{gaussfilter,
528			howpublished = "\url{http://en.wikipedia.org/wiki/Gaussian\_blur}",
529	jfenwick	6677	key = "{WikiGaussianBlur}",
530	gross	5670	title = "{Gaussian blur}",
531			url = "http://en.wikipedia.org/wiki/Gaussian_blur",
532			urldate = "20130221"
533	jfenwick	4705	}
534	gross	4052
Name	Value
svn:eol-style	native
svn:keywords	Author Date Id Revision