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Revision 5662 - (show annotations)
Thu Jun 18 04:40:34 2015 UTC (4 years ago) by caltinay
File size: 14306 byte(s)
Fixes #259 - replaced all references to mayavi by Mayavi2 in the docs.
The arguments were already correct.

1 Created by Kbib version 0.6.5
2 \#Last modified: Wed May 20 10:08:05 2009
3
4 @Book{ SAAD,
5 author = "Y. Saad",
6 title = "{Iterative Methods for Sparse Linear Systems}",
7 publisher = "PWS Publishing Company",
8 year = "1996",
9 address = "20 Park Plaza, Boston, MA 02116, USA"
10 }
11
12 @Book{ WEISS,
13 author = "R. Weiss",
14 title = "{Parameter-Free Iterative Linear Solvers}",
15 publisher = "Akademie Verlag",
16 year = "1996",
17 series = "{Mathematical Research, vol.\ 97}",
18 address = "Berlin"
19 }
20
21 @Book{ Multigrid,
22 author = {U. Trottenberg and C. W. Oosterlee and A. Sch{\"u}ller},
23 title = "{Multigrid}",
24 publisher = "Academic Press",
25 year = "2001"
26 }
27
28 @Book{ AMG,
29 author = "Y. Shapira",
30 title = "{Matrix-Based Multigrid}",
31 publisher = "Springer",
32 year = "2008"
33 }
34
35 @Book{ NumHand,
36 author = "P.~G. Ciarlet and J.~L. Lions",
37 title = "{Handbook of Numerical Analysis}",
38 publisher = "North Holland",
39 year = "1991",
40 volume = "2",
41 address = "Amsterdam"
42 }
43
44 @InProceedings{ NUMARRAY,
45 title = "{An Array Module for Python}",
46 booktitle = "{Astronomical Data Analysis Software and Systems XI}",
47 author = "Todd Miller and Jin-Chung Hsu and Perry Greenfield and Richard L. White",
48 year = "2001"
49 }
50
51 @Book{ Zienc,
52 author = "O.~C. Zienkiewicz",
53 title = "{The Finite Element Method in Engineering Science}",
54 publisher = "McGraw-Hill",
55 year = "1971",
56 address = "London",
57 edition = "second"
58 }
59
60 @Article{ SUPG2,
61 author = "H.C. Elman and A. Ramage",
62 title = "{An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation}",
63 journal = "SIAM J. Numer. Anal.",
64 year = "2002",
65 volume = "40",
66 number = "1",
67 pages = "254--281"
68 }
69
70 @Book{ TURCOTTE2002,
71 author = "Donald L. Turcotte and Gerald Schubert",
72 title = "{Geodynamics}",
73 publisher = "Cambridge University Press",
74 year = 2002,
75 edition = "Second"
76 }
77
78 @Article{ MORESI2003,
79 title = "{A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials}",
80 author = "L. Moresi and F. Dufour and H.--B. Muhlhaus",
81 journal = "Journal of Computational Physics",
82 pages = "476--497",
83 number = 184,
84 year = 2003
85 }
86
87 @Article{ GROSZ99c,
88 author = "L.~Grosz",
89 title = "{Preconditioning by Incomplete Block Elimination}",
90 journal = "J. of Num. Lin. Alg. with Appl.",
91 year = "2000",
92 note = "to appear"
93 }
94
95 @Book{ VTK,
96 author = "Inc {The Kitware}",
97 title = "{Visualization Toolkit User's Guide.}",
98 publisher = "Kitware, Inc publishers.",
99 year = "1971",
100 address = "London",
101 edition = "second"
102 }
103
104 @Article{ BOURGOUIN2006,
105 author = "L. Bourgouin and H. Muhlhaus and A. J. Hale and A. Arsac",
106 title = "{Towards realistic simulations of lava dome growth using the level set method}",
107 journal = "Acta Geotechnica",
108 year = "2006",
109 volume = "1",
110 number = "4",
111 pages = "225--236"
112 }
113
114 @Article{ SUSSMAN1994,
115 author = "M. Sussman and P. Smereka and S. Osher",
116 title = "{A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow}",
117 journal = "Journal of Computational Physics",
118 year = "1994",
119 volume = "114",
120 pages = "146--159"
121 }
122
123 @Article{ LIN2005,
124 author = "C. Lin and H. Lee and T. Lee and L. J. Weber",
125 title = "{A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows}",
126 journal = "International Journal for Numerical Methods in Fluids",
127 year = "2005",
128 volume = "49",
129 pages = "521--547"
130 }
131
132 @Article{ SUCKALE2008,
133 author = "J. Suckale and J. C. Have",
134 title = "{An alternative numerical model of buoyancy driven flows}",
135 year = "2008",
136 pages = "1--43"
137 }
138
139 @Article{ GROSS2006,
140 author = "L. Gross and L. Bourgouin and A. J. Hale and H.-B Muhlhaus",
141 title = "{Interface Modeling in Incompressible Media using Level Sets in Escript}",
142 journal = "Physics of the Earth and Planetary Interiors",
143 year = 2007,
144 volume = "163",
145 pages = "23--34",
146 month = "Aug.",
147 doi = "doi:10.1016/j.pepi.2007.04.004"
148 }
149
150 @Article{ VANKEKEN1997,
151 author = "P. E. {van Keken} and S. D. King and H. Schmeling and U. R. Christensen and D. Neumeister and M. P. Doin",
152 title = "{A comparison of methods for the modeling of thermochemical convection}",
153 journal = "J. Geophys. Res.",
154 year = "1997",
155 volume = "102",
156 number = "B10",
157 pages = "22477--22495"
158 }
159
160 @Article{ AAMIRBERKYAN2008,
161 author = "A. Amirberkyan and L. Gross",
162 title = "{Efficient Solvers for Incompressible Fluid Flows in Geosciences}",
163 journal = "ANZIAM Journal",
164 year = "2008",
165 volume = "50",
166 pages = "C189--C203"
167 }
168
169 @Article{ MBENZI2005,
170 author = "M. Benzi and G. H. Golub and J. Liesen",
171 title = "{Numerical solution of saddle point problems}",
172 journal = "Acta Numerica",
173 year = "2005",
174 volume = "14",
175 pages = "1--137"
176 }
177
178 @Misc{ OPENDX,
179 key = "opendx",
180 title = "{OpenDX}",
181 howpublished = "http://www.opendx.org/",
182 url = "http://www.opendx.org/"
183 }
184
185 @Misc{ netCDF,
186 key = "netcdf",
187 title = "{netCDF}",
188 howpublished = "http://www.unidata.ucar.edu/software/netcdf",
189 url = "http://www.unidata.ucar.edu/software/netcdf"
190 }
191
192 @Misc{ UMFPACK,
193 key = "umfpack",
194 howpublished = "http://www.cise.ufl.edu/research/sparse/umfpack/",
195 url = "http://www.cise.ufl.edu/research/sparse/umfpack/"
196 }
197
198 @Misc{ MKL,
199 key = "MKL",
200 title = "{INTEL's Math Kernel Library}"
201 }
202
203 @Misc{ VisIt,
204 key = "visit",
205 title = "{VisIt homepage}",
206 howpublished = "https://wci.llnl.gov/codes/visit/home.html",
207 url = "https://wci.llnl.gov/codes/visit/home.html"
208 }
209
210 @Misc{ Sympy,
211 key = "Sympy",
212 title = "{Sympy homepage}",
213 howpublished = "http://sympy.org/en/index.html",
214 url = "http://sympy.org/en/index.html"
215 }
216
217 @Misc{ OPENMP,
218 key = "openmp",
219 title = "{OpenMP}",
220 howpublished = "http://openmp.org",
221 url = "http://openmp.org"
222 }
223
224 @Misc{ MPI,
225 key = "mpi",
226 title = "{MPI}",
227 howpublished = "http://www.mpi-forum.org",
228 url = "http://www.mpi-forum.org"
229 }
230
231 @Book{ LBB,
232 author = "V. Girault and P. A. Raviart",
233 title = "{Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms}",
234 publisher = "Springer Verlag, Berlin",
235 year = 1986
236 }
237
238 @Misc{ SCSL,
239 title = "{SCSL (Scientific Computing Software Library)}",
240 url = "http://www.sgi.com/products/software/irix/scsl.html"
241 }
242
243 @Manual{ GMSH,
244 title = "{Gmsh Reference Manual}",
245 author = "Christophe Geuzaine and Jean-Francois Remacle",
246 edition = "1.12",
247 month = "Aug",
248 year = 2003,
249 url = "http://www.geuz.org/gmsh"
250 }
251
252 @Article{ RILU,
253 title = "{ARMS: an algebraic recursive multilevel solver for general sparse linear systems}",
254 author = "B. Suchomel and Y. Saad",
255 journal = "Numerical Linear Algebra with Applications",
256 pages = "1099--1506",
257 volume = "9",
258 number = 5,
259 year = 2002
260 }
261
262 @Article{ PASTIX,
263 author = "P. H{\'e}non and P. Ramet and J. Roman",
264 title = "{{PaStiX}: A High-Performance Parallel Direct Solver for Sparse Symmetric Definite Systems}",
265 journal = "Parallel Computing",
266 year = "2002",
267 volume = "28",
268 number = "2",
269 pages = "301--321",
270 month = jan
271 }
272
273 @Article{ Trilinos,
274 author = "Michael A. Heroux and Roscoe A. Bartlett and Vicki E. Howle and Robert J. Hoekstra and Jonathan J. Hu and Tamara G. Kolda and Richard B. Lehoucq and Kevin R. Long and Roger P. Pawlowski and Eric T. Phipps and Andrew G. Salinger and Heidi K. Thornquist and Ray S. Tuminaro and James M. Willenbring and Alan Williams and Kendall S. Stanley",
275 title = "{An overview of the Trilinos project}",
276 journal = "ACM Trans. Math. Softw.",
277 volume = "31",
278 number = "3",
279 year = "2005",
280 pages = "397--423",
281 publisher = "ACM Press",
282 address = "New York, NY, USA"
283 }
284
285 @Article{ SuperLU,
286 author = "James W. Demmel and Stanley C. Eisenstat and John R. Gilbert and Xiaoye S. Li and Joseph W. H. Liu",
287 title = "{A supernodal approach to sparse partial pivoting}",
288 journal = "SIAM J. Matrix Analysis and Applications",
289 year = "1999",
290 volume = "20",
291 number = "3",
292 pages = "720--755"
293 }
294
295 @Misc{ RIGHTHANDRULE,
296 key="RHR",
297 title = "{Right-hand rule}",
298 howpublished = "http://en.wikipedia.org/wiki/Right-hand_rule",
299 url = "http://en.wikipedia.org/wiki/Right-hand_rule"
300 }
301
302 @Misc{ TETGEN,
303 title = "{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator}",
304 author = "Hang Si",
305 month = "Jan",
306 year = 2008,
307 howpublished = "http://tetgen.berlios.de",
308 url = "http://tetgen.berlios.de"
309 }
310
311 @Misc{ NETGEN,
312 title = "{Netgen 1.4}",
313 author = "Tim Edwards",
314 howpublished = "http://opencircuitdesign.com/netgen/",
315 url = "http://opencircuitdesign.com/netgen/"
316 }
317
318 @Article{ ELMAN,
319 title = "Efficient preconditioning of the linearized Navier-Stokes equations for incompressible flow",
320 journal = "Journal of Computational and Applied Mathematics",
321 volume = "128",
322 number = "1--2",
323 pages = "261--279",
324 year = "2001",
325 note = "",
326 issn = "0377-0427",
327 doi = "DOI: 10.1016/S0377-0427(00)00515-X",
328 url = "http://www.sciencedirect.com/science/article/pii/S037704270000515X",
329 author = "David Silvester and Howard Elman and David Kay and Andrew Wathen",
330 keywords = "Navier-Stokes equations",
331 keywords = "Incompressible flow",
332 keywords = "Preconditioning",
333 keywords = "Multigrid iteration"
334 }
335
336 @Article{ LEASTSQUARESFEM1994,
337 author = "A. I. Pehlivanov and G. F. Carey and R. D. Lazarov",
338 title = "{Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems}",
339 journal = "SIAM Journal on Numerical Analysis",
340 year = 1994,
341 volume = "31",
342 number = 5,
343 pages = "1368--1377",
344 month = "October"
345 }
346
347 @Article{ Muhlhaus2005,
348 title = "{Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection}",
349 author = "Hans-Bernd Muhlhaus and Klaus Regenauer-Lieb",
350 journal = "Geophysical Journal International",
351 pages = "788--800(13)",
352 volume = "163",
353 number = 2,
354 month = "November",
355 year = 2005
356 }
357
358 @Manual{ NUMPY,
359 title = "{Numpy and Scipy Documentation}",
360 url = "http://docs.scipy.org/doc/",
361 howpublished = "http://docs.scipy.org/doc/",
362 author = "Scipy Community"
363 }
364
365 @Manual{ matplotlib,
366 title = "{matplotlib}",
367 author = "John Hunter and Michael Droettboom and Darren Dale",
368 month = "July",
369 year = "2009",
370 howpublished = "http://matplotlib.sourceforge.net/",
371 url = "http://matplotlib.sourceforge.net/"
372 }
373
374 @Manual{ mayavi,
375 key="mayavi",
376 title = "{Mayavi: 3D scientific data visualization and plotting in Python}",
377 year = "2015",
378 howpublished = "http://docs.enthought.com/mayavi/mayavi",
379 url = "http://docs.enthought.com/mayavi/mayavi"
380 }
381
382 @Misc{ gnuplot,
383 title = "{gnuplot homepage}",
384 author = "Thomas Williams and Colin Kelley",
385 month = mar,
386 year = "2009",
387 howpublished = "http://www.gnuplot.info/",
388 url = "http://www.gnuplot.info/"
389 }
390
391 @Manual{ SCIPY,
392 title = "{Numpy and Scipy Documentation}",
393 author = "The Scipy community community {community community}",
394 howpublished = "http://docs.scipy.org/doc/",
395 url = "http://docs.scipy.org/doc/"
396 }
397
398 @Misc{ SCSL,
399 title = "{SCSL (Scientific Computing Software Library)}",
400 howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
401 url = "http://www.sgi.com/products/software/irix/scsl.html"
402 }
403
404 @Misc{ IDEAS,
405 key="IDEAS",
406 title = "{I\_DEAS}",
407 howpublished = "http://www.plm.automation.siemens.com/en\\\_us/products/nx/",
408 url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
409 }
410
411 @Misc{ VRML,
412 key="VRML",
413 title = "{VRML}",
414 howpublished = "http://www.w3.org/MarkUp/VRML/",
415 url = "http://www.w3.org/MarkUp/VRML/"
416 }
417
418 @Misc{ STL,
419 key="STL",
420 title = "{STL}",
421 howpublished = "http://en.wikipedia.org/wiki/STL\_(file\_format)",
422 url = "http://en.wikipedia.org/wiki/STL_(file_format)"
423 }
424
425 @Misc{ NASTRAN,
426 key="NASTRAN",
427 title = "{Nastran}",
428 howpublished = "http://simcompanion.mscsoftware.com/",
429 url = "http://simcompanion.mscsoftware.com/"
430 }
431
432 @Misc{ MEDIT,
433 key="medit",
434 title = "{Medit}",
435 howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
436 url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
437 }
438
439 @Misc{ CGNS,
440 key="cgns",
441 title = "{CGNS}",
442 howpublished = "http://cgns.sourceforge.net/",
443 url = "http://cgns.sourceforge.net/"
444 }
445
446 @Misc{ PLOT3D,
447 key="plot3d",
448 title = "{Plot3D}",
449 howpublished = "http://www.plot3d.net/",
450 url = "http://www.plot3d.net/"
451 }
452
453 @Misc{ DIFFPACK,
454 key="diffpack",
455 title = "{Diffpack}",
456 howpublished = "http://www.diffpack.com/",
457 url = "http://www.diffpack.com/"
458 }
459
460 @Misc{ GOCAD,
461 key = "gocad",
462 title = "{Paradigm GOCAD homepage}",
463 howpublished = {\url{http://www.pdgm.com/Products/GOCAD}},
464 url = {http://www.pdgm.com/Products/GOCAD}
465 }
466
467 @InProceedings{ lazyauspdc,
468 author = "Joel Fenwick and Lutz Gross",
469 title = "{Lazy Evaluation of PDE Coefficients in the EScript System}",
470 booktitle = "{Parallel and Distributed Computing 2010 (AusPDC2010)}",
471 pages = "71--76",
472 year = "2010",
473 editor = "Jinjun Chen and Rajiv Ranjan",
474 volume = "107",
475 series = "{Conferences in Research and Practice in Information Technology}",
476 month = "January",
477 issn = "1445-1336"
478 }
479
480 @InProceedings{ LoulaCorrea2006a,
481 title = "{NUMERICAL ANALYSIS OF STABILIZED MIXED FINITE ELEMENT METHODS FOR DARCY FLOW }",
482 booktitle = "{III European Conference on Computational Mechanics Solids, Structures and Coupled Problems in Engineering }",
483 author = "Abimael F. D. Loula and Maicon R. Correa",
484 editor = "C.A. Mota Soares and others",
485 year = "2006 ",
486 localfile = "LoulaCorrea2006a.pdf"
487 }
488
489 @Article{ MasudHughes2002a,
490 title = "{A stabilized mixed finite element method for Darcy flowArif Masud
491
492 }",
493 author = "Arif Masud and Thomas J.R. Hughes",
494 journal = "Comput. Methods Appl. Mech. Engrg.",
495 pages = "4341--4370",
496 number = "191",
497 year = "2002",
498 localfile = "MasudHughes2002a.pdf
499 "
500 }
501
502 @Book{ Kelley2004a,
503 author = "C. T. Kelley",
504 title = "{Iterative Methods for Linear and Nonlinear Equations}",
505 Series= "{Frontiers in Applied Mathematics}",
506 volume="18",
507 publisher = "Cambridge University Press",
508 year = 2004
509 }
510
511 @ARTICLE{Schoenauer1981a,
512 author = {Sch{\"{o}}nauer, W. and Raith, K. and Glotz, G.},
513 title = {The principle of the difference of difference quotients as a key
514 to the selfadaptive solution of nonlinear partial differential equations},
515 journal = {Computer Methods in Applied Mechanics and Engineering},
516 year = {1981},
517 volume = {28},
518 pages = {327-359}
519 }
520
521
522 @Misc{gaussfilter,
523 title = {Gaussian blur},
524 howpublished = {\url{http://en.wikipedia.org/wiki/Gaussian_blur}},
525 url = {http://en.wikipedia.org/wiki/Gaussian_blur},
526 urldate = {20130221},
527 }
528

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