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1 @comment{x-kbibtex-personnameformatting=<%l><, %f>}
2
3 Created by Kbib version 0.6.5
4 #Last modified: Wed May 20 10:08:05 2009
5
6 @book{SAAD,
7 address = "20 Park Plaza, Boston, MA 02116, USA",
8 author = "Saad, Y.",
9 publisher = "PWS Publishing Company",
10 title = "{Iterative Methods for Sparse Linear Systems}",
11 year = "1996"
12 }
13
14 @book{WEISS,
15 address = "Berlin",
16 author = "Weiss, R.",
17 publisher = "Akademie Verlag",
18 series = "{Mathematical Research, vol.\ 97}",
19 title = "{Parameter-Free Iterative Linear Solvers}",
20 year = "1996"
21 }
22
23 @book{Multigrid,
24 author = "Trottenberg, U. and Oosterlee, C. W. and Sch{\"u}ller, A.",
25 publisher = "Academic Press",
26 title = "{Multigrid}",
27 year = "2001"
28 }
29
30 @book{AMG,
31 author = "Shapira, Y.",
32 publisher = "Springer",
33 title = "{Matrix-Based Multigrid}",
34 year = "2008"
35 }
36
37 @book{NumHand,
38 address = "Amsterdam",
39 author = "Ciarlet, P.~G. and Lions, J.~L.",
40 publisher = "North Holland",
41 title = "{Handbook of Numerical Analysis}",
42 volume = "2",
43 year = "1991"
44 }
45
46 @inproceedings{NUMARRAY,
47 author = "Miller, Todd and Hsu, Jin-Chung and Greenfield, Perry and White, Richard L.",
48 booktitle = "{Astronomical Data Analysis Software and Systems XI}",
49 title = "{An Array Module for Python}",
50 year = "2001"
51 }
52
53 @book{Zienc,
54 address = "London",
55 author = "Zienkiewicz, O.~C.",
56 edition = "second",
57 publisher = "McGraw-Hill",
58 title = "{The Finite Element Method in Engineering Science}",
59 year = "1971"
60 }
61
62 @article{SUPG2,
63 author = "Elman, H.C. and Ramage, A.",
64 journal = "SIAM J. Numer. Anal.",
65 number = "1",
66 pages = "254--281",
67 title = "{An Analysis of Smoothing Effects of Upwinding Strategies For The Convection-Diffusion Equation}",
68 volume = "40",
69 year = "2002"
70 }
71
72 @book{TURCOTTE2002,
73 author = "Turcotte, Donald L. and Schubert, Gerald",
74 edition = "Second",
75 publisher = "Cambridge University Press",
76 title = "{Geodynamics}",
77 year = 2002
78 }
79
80 @article{MORESI2003,
81 author = "Moresi, L. and Dufour, F. and Muhlhaus, H.--B.",
82 journal = "Journal of Computational Physics",
83 number = 184,
84 pages = "476--497",
85 title = "{A {Lagrangian} integration point finite element method for large deformation modeling of viscoelastic geomaterials}",
86 year = 2003
87 }
88
89 @article{GROSZ99c,
90 author = "L.~Grosz",
91 journal = "J. of Num. Lin. Alg. with Appl.",
92 note = "to appear",
93 title = "{Preconditioning by Incomplete Block Elimination}",
94 year = "2000"
95 }
96
97 @book{VTK,
98 address = "London",
99 author = "{The Kitware}, Inc",
100 edition = "second",
101 publisher = "Kitware, Inc publishers.",
102 title = "{Visualization Toolkit User's Guide.}",
103 year = "1971"
104 }
105
106 @article{BOURGOUIN2006,
107 author = "Bourgouin, L. and Muhlhaus, H. and Hale, A. J. and Arsac, A.",
108 journal = "Acta Geotechnica",
109 number = "4",
110 pages = "225--236",
111 title = "{Towards realistic simulations of lava dome growth using the level set method}",
112 volume = "1",
113 year = "2006"
114 }
115
116 @article{SUSSMAN1994,
117 author = "Sussman, M. and Smereka, P. and Osher, S.",
118 journal = "Journal of Computational Physics",
119 pages = "146--159",
120 title = "{A Level Set Approach for Computing Solutions to Incompressible Two-Phase Flow}",
121 volume = "114",
122 year = "1994"
123 }
124
125 @article{LIN2005,
126 author = "Lin, C. and Lee, H. and Lee, T. and Weber, L. J.",
127 journal = "International Journal for Numerical Methods in Fluids",
128 pages = "521--547",
129 title = "{A Level Set Characteristic Galerkin Finite Element Method for Free Surface Flows}",
130 volume = "49",
131 year = "2005"
132 }
133
134 @article{SUCKALE2008,
135 author = "Suckale, J. and Have, J. C.",
136 pages = "1--43",
137 title = "{An alternative numerical model of buoyancy driven flows}",
138 year = "2008"
139 }
140
141 @article{GROSS2006,
142 author = "Gross, L. and Bourgouin, L. and Hale, A. J. and Muhlhaus, H.-B",
143 doi = "10.1016/j.pepi.2007.04.004",
144 journal = "Physics of the Earth and Planetary Interiors",
145 month = "Aug.",
146 pages = "23--34",
147 title = "{Interface Modeling in Incompressible Media using Level Sets in Escript}",
148 volume = "163",
149 year = 2007
150 }
151
152 @article{VANKEKEN1997,
153 author = "{van Keken}, P. E. and King, S. D. and Schmeling, H. and Christensen, U. R. and Neumeister, D. and Doin, M. P.",
154 journal = "J. Geophys. Res.",
155 number = "B10",
156 pages = "22477--22495",
157 title = "{A comparison of methods for the modeling of thermochemical convection}",
158 volume = "102",
159 year = "1997"
160 }
161
162 @article{AAMIRBERKYAN2008,
163 author = "Amirberkyan, A. and Gross, L.",
164 journal = "ANZIAM Journal",
165 pages = "C189--C203",
166 title = "{Efficient Solvers for Incompressible Fluid Flows in Geosciences}",
167 volume = "50",
168 year = "2008"
169 }
170
171 @article{MBENZI2005,
172 author = "Benzi, M. and Golub, G. H. and Liesen, J.",
173 journal = "Acta Numerica",
174 pages = "1--137",
175 title = "{Numerical solution of saddle point problems}",
176 volume = "14",
177 year = "2005"
178 }
179
180 @misc{OPENDX,
181 howpublished = "http://www.opendx.org/",
182 key = "opendx",
183 title = "{OpenDX}",
184 url = "http://www.opendx.org/"
185 }
186
187 @misc{netCDF,
188 howpublished = "http://www.unidata.ucar.edu/software/netcdf",
189 key = "netcdf",
190 title = "{netCDF}",
191 url = "http://www.unidata.ucar.edu/software/netcdf"
192 }
193
194 @article{UMFPACK,
195 author = "Davis, Timothy A.",
196 issue = 2,
197 journal = "ACM Transactions on Mathematical Software (TOMS)",
198 pages = "196--199",
199 title = "{Algorithm 832: UMFPACK V4.3---an unsymmetric-pattern multifrontal method}",
200 url = "http://www.cise.ufl.edu/research/sparse/umfpack/",
201 volume = 30,
202 year = 2004
203 }
204
205 @misc{MKL,
206 key = "MKL",
207 title = "{INTEL's Math Kernel Library}"
208 }
209
210 @misc{VisIt,
211 howpublished = "https://wci.llnl.gov/codes/visit/home.html",
212 key = "visit",
213 title = "{VisIt homepage}",
214 url = "https://wci.llnl.gov/codes/visit/home.html"
215 }
216
217 @misc{Sympy,
218 howpublished = "http://sympy.org/en/index.html",
219 key = "Sympy",
220 title = "{Sympy homepage}",
221 url = "http://sympy.org/en/index.html"
222 }
223
224 @misc{OPENMP,
225 howpublished = "http://openmp.org",
226 key = "openmp",
227 title = "{OpenMP}",
228 url = "http://openmp.org"
229 }
230
231 @misc{MPI,
232 howpublished = "http://www.mpi-forum.org",
233 key = "mpi",
234 title = "{MPI}",
235 url = "http://www.mpi-forum.org"
236 }
237
238 @book{LBB,
239 author = "Girault, V. and Raviart, P. A.",
240 publisher = "Springer Verlag, Berlin",
241 title = "{Finite Element Methods for Navier-Stokes Equations- Theory and Algorithms}",
242 year = 1986
243 }
244
245 @misc{SCSL,
246 title = "{SCSL (Scientific Computing Software Library)}",
247 url = "http://www.sgi.com/products/software/irix/scsl.html"
248 }
249
250 @manual{GMSH,
251 author = "Geuzaine, Christophe and Remacle, Jean-Francois",
252 edition = "1.12",
253 month = "Aug",
254 title = "{Gmsh Reference Manual}",
255 url = "http://www.geuz.org/gmsh",
256 year = 2003
257 }
258
259 @article{RILU,
260 author = "Suchomel, B. and Saad, Y.",
261 journal = "Numerical Linear Algebra with Applications",
262 number = 5,
263 pages = "1099--1506",
264 title = "{ARMS: an algebraic recursive multilevel solver for general sparse linear systems}",
265 volume = "9",
266 year = 2002
267 }
268
269 @article{Trilinos,
270 address = "New York, NY, USA",
271 author = "Heroux, Michael A. and Bartlett, Roscoe A. and Howle, Vicki E. and Hoekstra, Robert J. and Hu, Jonathan J. and Kolda, Tamara G. and Lehoucq, Richard B. and Long, Kevin R. and Pawlowski, Roger P. and Phipps, Eric T. and Salinger, Andrew G. and Thornquist, Heidi K. and Tuminaro, Ray S. and Willenbring, James M. and Williams, Alan and Stanley, Kendall S.",
272 journal = "ACM Trans. Math. Softw.",
273 number = "3",
274 pages = "397--423",
275 publisher = "ACM Press",
276 title = "{An overview of the Trilinos project}",
277 volume = "31",
278 year = "2005"
279 }
280
281 @article{SuperLU,
282 author = "Demmel, James W. and Eisenstat, Stanley C. and Gilbert, John R. and Li, Xiaoye S. and Liu, Joseph W. H.",
283 journal = "SIAM J. Matrix Analysis and Applications",
284 number = "3",
285 pages = "720--755",
286 title = "{A supernodal approach to sparse partial pivoting}",
287 volume = "20",
288 year = "1999"
289 }
290
291 @misc{RIGHTHANDRULE,
292 howpublished = "http://en.wikipedia.org/wiki/Right-hand\_rule",
293 key = "RHR",
294 title = "{Right-hand rule}",
295 url = "http://en.wikipedia.org/wiki/Right-hand_rule"
296 }
297
298 @misc{TETGEN,
299 author = "Si, Hang",
300 howpublished = "http://tetgen.berlios.de",
301 month = "Jan",
302 title = "{TetGen: A Quality Tetrahedral Mesh Generator and Three-Dimensional Delaunay Triangulator}",
303 url = "http://tetgen.berlios.de",
304 year = 2008
305 }
306
307 @misc{NETGEN,
308 author = "Edwards, Tim",
309 howpublished = "http://opencircuitdesign.com/netgen/",
310 title = "{Netgen 1.4}",
311 url = "http://opencircuitdesign.com/netgen/"
312 }
313
314 @article{ELMAN,
315 author = "Silvester, David and Elman, Howard and Kay, David and Wathen, Andrew",
316 doi = "10.1016/S0377-0427(00)00515-X",
317 issn = "0377-0427",
318 journal = "Journal of Computational and Applied Mathematics",
319 keywords = "Navier-Stokes equations; Incompressible flow; Preconditioning; Multigrid iteration",
320 note = "",
321 number = "1--2",
322 pages = "261--279",
323 title = "{Efficient preconditioning of the linearized Navier-Stokes equations for incompressible flow}",
324 url = "http://www.sciencedirect.com/science/article/pii/S037704270000515X",
325 volume = "128",
326 year = "2001"
327 }
328
329 @article{LEASTSQUARESFEM1994,
330 author = "Pehlivanov, A. I. and Carey, G. F. and Lazarov, R. D.",
331 journal = "SIAM Journal on Numerical Analysis",
332 month = "October",
333 number = 5,
334 pages = "1368--1377",
335 title = "{Least-Squares Mixed Finite Elements for Second-Order Elliptic Problems}",
336 volume = "31",
337 year = 1994
338 }
339
340 @article{Muhlhaus2005,
341 author = "Muhlhaus, Hans-Bernd and Regenauer-Lieb, Klaus",
342 journal = "Geophysical Journal International",
343 month = "November",
344 number = 2,
345 pages = "788--800(13)",
346 title = "{Towards a self-consistent plate mantle model that includes elasticity: simple benchmarks and application to basic modes of convection}",
347 volume = "163",
348 year = 2005
349 }
350
351 @manual{NUMPY,
352 author = "Community, Scipy",
353 howpublished = "http://docs.scipy.org/doc/",
354 title = "{Numpy and Scipy Documentation}",
355 url = "http://docs.scipy.org/doc/"
356 }
357
358 @manual{matplotlib,
359 author = "Hunter, John and Droettboom, Michael and Dale, Darren",
360 howpublished = "http://matplotlib.sourceforge.net/",
361 month = "July",
362 title = "{matplotlib}",
363 url = "http://matplotlib.sourceforge.net/",
364 year = "2009"
365 }
366
367 @manual{mayavi,
368 howpublished = "http://docs.enthought.com/mayavi/mayavi",
369 key = "mayavi",
370 title = "{Mayavi: 3D scientific data visualization and plotting in Python}",
371 year = "2015",
372 url = "http://docs.enthought.com/mayavi/mayavi"
373 }
374
375 @misc{gnuplot,
376 author = "Williams, Thomas and Kelley, Colin",
377 howpublished = "http://www.gnuplot.info/",
378 month = mar,
379 title = "{gnuplot homepage}",
380 url = "http://www.gnuplot.info/",
381 year = "2009"
382 }
383
384 @manual{SCIPY,
385 author = "{The Scipy community}",
386 howpublished = "http://docs.scipy.org/doc/",
387 title = "{Numpy and Scipy Documentation}",
388 url = "http://docs.scipy.org/doc/"
389 }
390
391 @misc{SCSL,
392 howpublished = "http://www.sgi.com/products/software/irix/scsl.html",
393 title = "{SCSL (Scientific Computing Software Library)}",
394 url = "http://www.sgi.com/products/software/irix/scsl.html"
395 }
396
397 @misc{IDEAS,
398 howpublished = "http://www.plm.automation.siemens.com/en\\\_us/products/nx/",
399 key = "IDEAS",
400 title = "{I\_DEAS}",
401 url = "http://www.plm.automation.siemens.com/en_us/products/nx/"
402 }
403
404 @misc{VRML,
405 howpublished = "http://www.w3.org/MarkUp/VRML/",
406 key = "VRML",
407 title = "{VRML}",
408 url = "http://www.w3.org/MarkUp/VRML/"
409 }
410
411 @misc{STL,
412 howpublished = "http://en.wikipedia.org/wiki/STL\_(file\_format)",
413 key = "STL",
414 title = "{STL}",
415 url = "http://en.wikipedia.org/wiki/STL_(file_format)"
416 }
417
418 @misc{NASTRAN,
419 howpublished = "http://simcompanion.mscsoftware.com/",
420 key = "NASTRAN",
421 title = "{Nastran}",
422 url = "http://simcompanion.mscsoftware.com/"
423 }
424
425 @misc{MEDIT,
426 howpublished = "http://www-rocq.inria.fr/OpenFEM/Doc/",
427 key = "medit",
428 title = "{Medit}",
429 url = "http://www-rocq.inria.fr/OpenFEM/Doc/"
430 }
431
432 @misc{CGNS,
433 howpublished = "http://cgns.sourceforge.net/",
434 key = "cgns",
435 title = "{CGNS}",
436 url = "http://cgns.sourceforge.net/"
437 }
438
439 @misc{PLOT3D,
440 howpublished = "http://www.plot3d.net/",
441 key = "plot3d",
442 title = "{Plot3D}",
443 url = "http://www.plot3d.net/"
444 }
445
446 @misc{DIFFPACK,
447 howpublished = "http://www.diffpack.com/",
448 key = "diffpack",
449 title = "{Diffpack}",
450 url = "http://www.diffpack.com/"
451 }
452
453 @misc{GOCAD,
454 howpublished = "\url{http://www.pdgm.com/Products/GOCAD}",
455 key = "gocad",
456 title = "{Paradigm GOCAD homepage}",
457 url = "http://www.pdgm.com/Products/GOCAD"
458 }
459
460 @inproceedings{lazyauspdc,
461 author = "Fenwick, Joel and Gross, Lutz",
462 booktitle = "{Parallel and Distributed Computing 2010 (AusPDC2010)}",
463 editor = "Chen, Jinjun and Ranjan, Rajiv",
464 issn = "1445-1336",
465 month = "January",
466 pages = "71--76",
467 series = "{Conferences in Research and Practice in Information Technology}",
468 title = "{Lazy Evaluation of PDE Coefficients in the EScript System}",
469 volume = "107",
470 year = "2010"
471 }
472
473 @inproceedings{LoulaCorrea2006a,
474 author = "Loula, Abimael F. D. and Correa, Maicon R.",
475 booktitle = "{III European Conference on Computational Mechanics Solids, Structures and Coupled Problems in Engineering }",
476 editor = "Soares, C.A. Mota and others",
477 localfile = "LoulaCorrea2006a.pdf",
478 title = "{NUMERICAL ANALYSIS OF STABILIZED MIXED FINITE ELEMENT METHODS FOR DARCY FLOW }",
479 year = "2006"
480 }
481
482 @article{MasudHughes2002a,
483 author = "Masud, Arif and Hughes, Thomas J.R.",
484 journal = "Comput. Methods Appl. Mech. Engrg.",
485 localfile = "MasudHughes2002a.pdf",
486 number = "191",
487 pages = "4341--4370",
488 title = "{A stabilized mixed finite element method for Darcy flowArif Masud }",
489 year = "2002"
490 }
491
492 @book{Kelley2004a,
493 author = "Kelley, C. T.",
494 publisher = "Cambridge University Press",
495 series = "{Frontiers in Applied Mathematics}",
496 title = "{Iterative Methods for Linear and Nonlinear Equations}",
497 volume = "18",
498 year = 2004
499 }
500
501 @article{Schoenauer1981a,
502 author = "Sch{\"o}nauer, W. and Raith, K. and Glotz, G.",
503 journal = "Computer Methods in Applied Mechanics and Engineering",
504 pages = "327--359",
505 title = "{The principle of the difference of difference quotients as a key to the selfadaptive solution of nonlinear partial differential equations}",
506 volume = "28",
507 year = "1981"
508 }
509
510 @misc{gaussfilter,
511 howpublished = "\url{http://en.wikipedia.org/wiki/Gaussian\_blur}",
512 key = "{WikiGaussianBlur}",
513 title = "{Gaussian blur}",
514 url = "http://en.wikipedia.org/wiki/Gaussian_blur",
515 urldate = "20130221"
516 }
517

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