/[escript]/trunk/dudley/src/CPPAdapter/dudleycpp.cpp
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revision 1326 by ksteube, Mon Oct 1 08:10:41 2007 UTC revision 1801 by ksteube, Fri Sep 19 01:37:09 2008 UTC
# Line 15  Line 15 
15    
16  #ifdef PASO_MPI  #ifdef PASO_MPI
17  #include <mpi.h>  #include <mpi.h>
18    #include "paso/Paso_MPI.h"
19  #endif  #endif
20  extern "C" {  extern "C" {
21  #include "../Finley.h"  #include "../Finley.h"
# Line 23  extern "C" { Line 24  extern "C" {
24  #include "MeshAdapter.h"  #include "MeshAdapter.h"
25  #include "MeshAdapterFactory.h"  #include "MeshAdapterFactory.h"
26  #include "SystemMatrixAdapter.h"  #include "SystemMatrixAdapter.h"
27    #include "TransportProblemAdapter.h"
28    
29  #include "FinleyAdapterException.h"  #include "FinleyAdapterException.h"
30  // #include "esysUtils/EsysException.h"  // #include "esysUtils/EsysException.h"
# Line 78  using namespace boost::python; Line 80  using namespace boost::python;
80  BOOST_PYTHON_MODULE(finleycpp)  BOOST_PYTHON_MODULE(finleycpp)
81  {  {
82    
   // def("ReadMesh",finley::readMesh,readMesh_overloads());  
   // def("Brick",finley::brick,brick_overloads());  
   // def("Rectangle",finley::rectangle,rectangle_overloads());  
   // def("Interval",finley::interval,interval_overloads());  
   // def("GlueFaces",finley::glueFaces,glueFaces_overloads());  
   // def("JoinFaces",finley::joinFaces,joinFaces_overloads());  
83    //    //
84    // NOTE: The return_value_policy is necessary for functions that    // NOTE: The return_value_policy is necessary for functions that
85    // return pointers.    // return pointers.
86      //
87      register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator));
88    
89    def("load",finley::loadMesh,    def("LoadMesh",finley::loadMesh,
90        (arg("fileName")="file.nc"),        (arg("fileName")="file.nc"),
91        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
92    def("ReadMesh",finley::readMesh,    def("ReadMesh",finley::readMesh,
93        (arg("fileName")="file.fly",arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimize")=true),        (arg("fileName")="file.fly",arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimize")=true),
94        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
95      def("ReadMeshMPI",finley::readMeshMPI,
96          (arg("fileName")="file.fly",arg("integrationOrder")=-1,  arg("reducedIntegrationOrder")=-1,  arg("optimize")=true),
97          return_value_policy<manage_new_object>());
98    
99    def("ReadGmsh",finley::readGmsh,    def("ReadGmsh",finley::readGmsh,
100        (arg("fileName")="file.msh",arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimize")=true),        (arg("fileName")="file.msh",arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimize")=true),
# Line 135  BOOST_PYTHON_MODULE(finleycpp) Line 136  BOOST_PYTHON_MODULE(finleycpp)
136        arg("optimize")=true),        arg("optimize")=true),
137        return_value_policy<manage_new_object>());        return_value_policy<manage_new_object>());
138    
139    register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator));  
140    
141    class_<finley::MeshAdapter, bases<escript::AbstractContinuousDomain> >    class_<finley::MeshAdapter, bases<escript::AbstractContinuousDomain> >
142        ("MeshAdapter",init<optional <Finley_Mesh*> >())        ("MeshAdapter",init<optional <Finley_Mesh*> >())
143        .def(init<const finley::MeshAdapter&>())        .def(init<const finley::MeshAdapter&>())
144        .def("write",&finley::MeshAdapter::write)        .def("write",&finley::MeshAdapter::write)
145        .def("print_mesh_info",&finley::MeshAdapter::Print_Mesh_Info)        .def("print_mesh_info",&finley::MeshAdapter::Print_Mesh_Info,(arg("full")=false))
146        .def("dump",&finley::MeshAdapter::write)        .def("dump",&finley::MeshAdapter::dump)
147        .def("getDescription",&finley::MeshAdapter::getDescription)        .def("getDescription",&finley::MeshAdapter::getDescription)
148        .def("getDim",&finley::MeshAdapter::getDim)        .def("getDim",&finley::MeshAdapter::getDim)
149        .def("getDataShape",&finley::MeshAdapter::getDataShape)        .def("getDataShape",&finley::MeshAdapter::getDataShape)
150          .def("getNumDataPointsGlobal",&finley::MeshAdapter::getNumDataPointsGlobal)
151        .def("addPDEToSystem",&finley::MeshAdapter::addPDEToSystem)        .def("addPDEToSystem",&finley::MeshAdapter::addPDEToSystem)
152        .def("addPDEToLumpedSystem",&finley::MeshAdapter::addPDEToLumpedSystem)        .def("addPDEToLumpedSystem",&finley::MeshAdapter::addPDEToLumpedSystem)
153        .def("addPDEToRHS",&finley::MeshAdapter::addPDEToRHS)        .def("addPDEToRHS",&finley::MeshAdapter::addPDEToRHS)
154          .def("addPDEToTransportProblem",&finley::MeshAdapter::addPDEToTransportProblem)
155        .def("newOperator",&finley::MeshAdapter::newSystemMatrix)        .def("newOperator",&finley::MeshAdapter::newSystemMatrix)
156          .def("newTransportProblem",&finley::MeshAdapter::newTransportProblem)
157        .def("getSystemMatrixTypeId",&finley::MeshAdapter::getSystemMatrixTypeId)        .def("getSystemMatrixTypeId",&finley::MeshAdapter::getSystemMatrixTypeId)
158        .def("setX",&finley::MeshAdapter::setNewX)        .def("setX",&finley::MeshAdapter::setNewX)
159        .def("getX",&finley::MeshAdapter::getX)        .def("getX",&finley::MeshAdapter::getX)
# Line 166  BOOST_PYTHON_MODULE(finleycpp) Line 170  BOOST_PYTHON_MODULE(finleycpp)
170    
171    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >    class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> >
172        ("OperatorAdapter",no_init)        ("OperatorAdapter",no_init)
173          .def("print_matrix_info",&finley::SystemMatrixAdapter::Print_Matrix_Info,(arg("full")=false))
174        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)        .def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols)
175        .def("resetValues",&finley::SystemMatrixAdapter::resetValues)        .def("resetValues",&finley::SystemMatrixAdapter::resetValues)
176        .def("saveMM",&finley::SystemMatrixAdapter::saveMM)        .def("saveMM",&finley::SystemMatrixAdapter::saveMM)
177        .def("saveHB",&finley::SystemMatrixAdapter::saveHB);        .def("saveHB",&finley::SystemMatrixAdapter::saveHB);
178    
179      class_<finley::TransportProblemAdapter, bases<escript::AbstractTransportProblem> >
180          ("TransportProblemAdapter",no_init)
181          .def("getSafeTimeStepSize",&finley::TransportProblemAdapter::getSafeTimeStepSize)
182          .def("resetTransport",&finley::TransportProblemAdapter::resetTransport);
183  }  }

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