Log of /trunk/escript/py_src

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Revision 7027 - Directory Listing
Modified Fri Aug 7 05:26:26 2020 UTC (2 years, 6 months ago) by uqaeller

Merged in most of Mark's work

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Revision 6939 - Directory Listing
Modified Mon Jan 20 03:37:18 2020 UTC (3 years ago) by uqaeller

Updated the copyright header.

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Revision 6651 - Directory Listing
Modified Wed Feb 7 02:12:08 2018 UTC (5 years ago) by jfenwick

Make everyone sad by touching all the files

Copyright dates update

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Revision 6634 - Directory Listing
Modified Tue Dec 5 05:01:43 2017 UTC (5 years, 2 months ago) by jfenwick

Add a package docstring to escript

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Revision 6523 - Directory Listing
Modified Tue Mar 7 06:50:34 2017 UTC (5 years, 11 months ago) by jfenwick

UPDATE THE COPYRIGHT DATES

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Revision 6119 - Directory Listing
Modified Sun Apr 3 23:36:59 2016 UTC (6 years, 10 months ago) by caltinay

merging trilinos branch to trunk.
We can now build with trilinos and use it instead of paso for single PDEs.
There are some more things to be done...

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Revision 6112 - Directory Listing
Modified Thu Mar 31 09:40:10 2016 UTC (6 years, 10 months ago) by jfenwick

Relicense all the things!

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Revision 6093 - Directory Listing
Modified Thu Mar 24 07:18:55 2016 UTC (6 years, 10 months ago) by jfenwick

Removing unintended inclusions in __all__ for esys.escript

Patched some unit tests which were affected.

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Revision 5863 - Directory Listing
Modified Wed Jan 13 02:25:48 2016 UTC (7 years ago) by jfenwick

Copyright dates updated.
\version for doxygen to read

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Revision 5828 - Directory Listing
Modified Mon Nov 23 00:43:19 2015 UTC (7 years, 2 months ago) by jfenwick

Provide access to splitworld via the escript package

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Revision 5740 - Directory Listing
Modified Mon Jul 13 10:28:24 2015 UTC (7 years, 6 months ago) by jfenwick

Remove blanket import of escript into inversions.
Modify __all__ to allow "hiding" some members of escript from a blanket import

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Revision 5707 - Directory Listing
Modified Mon Jun 29 03:59:06 2015 UTC (7 years, 7 months ago) by sshaw

adding copyright headers to files without copyright info, moved header to top of file in some cases where it wasn't

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Revision 5706 - Directory Listing
Modified Mon Jun 29 03:41:36 2015 UTC (7 years, 7 months ago) by sshaw

all python files now force use of python3 prints and division syntax to stop sneaky errors appearing in py3 environs

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Revision 5593 - Directory Listing
Modified Fri Apr 24 01:36:26 2015 UTC (7 years, 9 months ago) by jfenwick

Fixing institution name to comply with policy

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Revision 5562 - Directory Listing
Modified Thu Mar 26 01:36:21 2015 UTC (7 years, 10 months ago) by jfenwick

More split world functions

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Revision 5448 - Directory Listing
Modified Fri Feb 6 05:31:37 2015 UTC (8 years ago) by jfenwick

Updating all the dates

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Revision 4884 - Directory Listing
Modified Thu Apr 24 04:47:39 2014 UTC (8 years, 9 months ago) by jduplessis

this file is added so that we can import Symbolic by doing:
    import esys.escript.symbolic as symb instead of 
    import esys.escriptcore.symbolic as symb

the one line containined in the file is on line five for reasons prettiness

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Revision 4657 - Directory Listing
Modified Thu Feb 6 06:12:20 2014 UTC (9 years ago) by jfenwick

I changed some files.
Updated copyright notices, added GeoComp.

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Revision 4525 - Directory Listing
Modified Fri Aug 30 09:14:35 2013 UTC (9 years, 5 months ago) by jfenwick

try this

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Revision 4508 - Directory Listing
Modified Wed Jul 24 04:23:22 2013 UTC (9 years, 6 months ago) by jfenwick

Moving to escriptcore

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Revision 4504 - Directory Listing
Modified Mon Jul 22 02:04:34 2013 UTC (9 years, 6 months ago) by caltinay

Fix to verbose parameter reporting in linear pdes

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Revision 4447 - Directory Listing
Modified Wed Jun 12 13:55:53 2013 UTC (9 years, 8 months ago) by caltinay

Clean up some generated test files.

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Revision 4446 - Directory Listing
Modified Tue Jun 11 04:00:15 2013 UTC (9 years, 8 months ago) by caltinay

This should fix the py3 error...

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Revision 4407 - Directory Listing
Modified Tue May 14 05:17:24 2013 UTC (9 years, 8 months ago) by jfenwick

Added output function to arithmetic tuple

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Revision 4399 - Directory Listing
Modified Thu May 9 10:46:41 2013 UTC (9 years, 9 months ago) by jfenwick

just fiddling

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Revision 4398 - Directory Listing
Modified Thu May 9 08:42:44 2013 UTC (9 years, 9 months ago) by jfenwick

support for supressing doco subpackages. fiddling with one of the imports to try to reduce the number of places where Data appears.  Seriously it looks like we have 8 different Data classes

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Revision 4396 - Directory Listing
Modified Wed May 8 09:27:10 2013 UTC (9 years, 9 months ago) by jfenwick

fix extraction script to pick up more classes. Stop models from importing escript into its namespace

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Revision 4326 - Directory Listing
Modified Wed Mar 20 02:50:46 2013 UTC (9 years, 10 months ago) by caltinay

Removed stray print statement.

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Revision 4286 - Directory Listing
Modified Thu Mar 7 04:28:11 2013 UTC (9 years, 11 months ago) by caltinay

Assorted spelling fixes.

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Revision 4285 - Directory Listing
Modified Thu Mar 7 01:08:43 2013 UTC (9 years, 11 months ago) by caltinay

Corrected some spelling.

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Revision 4281 - Directory Listing
Modified Wed Mar 6 07:08:36 2013 UTC (9 years, 11 months ago) by gross

typo - sorry

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Revision 4237 - Directory Listing
Modified Thu Feb 21 07:27:36 2013 UTC (9 years, 11 months ago) by jfenwick

Fixed bad tabbing so this revision works with python3 or clang.
(clang at least up to the tests which need pyproj)

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Revision 4190 - Directory Listing
Modified Mon Feb 11 05:10:00 2013 UTC (9 years, 11 months ago) by gross

unit gal added

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Revision 4154 - Directory Listing
Modified Tue Jan 22 09:30:23 2013 UTC (10 years ago) by jfenwick

Round 1 of copyright fixes

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Revision 4126 - Directory Listing
Modified Tue Jan 8 02:37:48 2013 UTC (10 years, 1 month ago) by gross

some work on the level set class. no testing yet.

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Revision 4114 - Directory Listing
Modified Fri Dec 14 04:24:46 2012 UTC (10 years, 1 month ago) by caltinay

Time to remove deprecated saveVTK/DX methods from Data and Domain.

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Revision 4104 - Directory Listing
Modified Thu Dec 13 03:30:23 2012 UTC (10 years, 1 month ago) by jfenwick

Ensuring we are using new-style classes
This may not be strictly necessary since our code does not depend on the difference.

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Revision 4074 - Directory Listing
Modified Thu Nov 15 03:30:59 2012 UTC (10 years, 2 months ago) by gross

this will break the downundermodule: major revision of the classes.

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Revision 4071 - Directory Listing
Modified Tue Nov 13 21:43:11 2012 UTC (10 years, 2 months ago) by gross

small fix

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Revision 4069 - Directory Listing
Modified Tue Nov 13 07:47:16 2012 UTC (10 years, 2 months ago) by gross

ArithmeticTuple supports empty data object as components now.

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Revision 4046 - Directory Listing
Modified Tue Oct 30 04:43:25 2012 UTC (10 years, 3 months ago) by caltinay

Deprecated saveDX and made sure DeprecationWarnings are shown (py2.7 disabled
those). Also a fix to $BUILD_DIR being non-absolute.

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Revision 4039 - Directory Listing
Modified Fri Oct 26 07:34:06 2012 UTC (10 years, 3 months ago) by gross

magnetic inversion added

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Revision 4025 - Directory Listing
Modified Mon Oct 22 08:18:47 2012 UTC (10 years, 3 months ago) by gross

 linearPDE.resetRightHandSideCoefficients has been implemented and tested.

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Revision 4023 - Directory Listing
Modified Tue Oct 16 04:17:48 2012 UTC (10 years, 3 months ago) by caltinay

Another fix to the PDE assembly logic in ripley.

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Revision 4020 - Directory Listing
Modified Thu Oct 11 22:27:33 2012 UTC (10 years, 4 months ago) by caltinay

Removed print() that slipped in in last commit.

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Revision 4019 - Directory Listing
Modified Thu Oct 11 08:12:55 2012 UTC (10 years, 4 months ago) by jfenwick

More tabbing errors,
range/xrange
...

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Revision 4018 - Directory Listing
Modified Thu Oct 11 04:43:39 2012 UTC (10 years, 4 months ago) by jfenwick

Used "new" raise syntax in a few places
Fixed some tabbing
Fixed some funnies involving changes to xrange/range
added a quick and nasty __hash__ function to Symbol
   def __hash__(self):
        return id(self)
This does mean that __hash__ and == do not match exactly.   Not sure if that matters for our purposes

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Revision 4009 - Directory Listing
Modified Tue Oct 2 05:53:37 2012 UTC (10 years, 4 months ago) by caltinay

don't try to flip y-coord in reader. some more fixes and doco.

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Revision 4007 - Directory Listing
Modified Tue Oct 2 02:12:01 2012 UTC (10 years, 4 months ago) by caltinay

Doco updates.
Data source paddings now take x,y not xy,z as Z padding can be done by setting
vertical extents.

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Revision 4000 - Directory Listing
Modified Thu Sep 27 01:32:07 2012 UTC (10 years, 4 months ago) by caltinay

s/escript/escore/

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Revision 3997 - Directory Listing
Modified Thu Sep 27 01:09:12 2012 UTC (10 years, 4 months ago) by caltinay

Add note to documentation that saveDataCSV will not work in all cases.

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Revision 3995 - Directory Listing
Modified Wed Sep 26 12:43:17 2012 UTC (10 years, 4 months ago) by jfenwick

More module fiddles

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Revision 3994 - Directory Listing
Modified Wed Sep 26 07:38:38 2012 UTC (10 years, 4 months ago) by jfenwick

Install doco still needs work.
Removing some of the weird:
     esys.finley.finley
type modules

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Revision 3990 - Directory Listing
Modified Tue Sep 25 05:03:20 2012 UTC (10 years, 4 months ago) by caltinay

First set of assorted epydoc fixes/additions.

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Revision 3982 - Directory Listing
Modified Fri Sep 21 03:23:22 2012 UTC (10 years, 4 months ago) by jfenwick

More edits + removing pyvisi from trunk

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Revision 3981 - Directory Listing
Modified Fri Sep 21 02:47:54 2012 UTC (10 years, 4 months ago) by jfenwick

First pass of updating copyright notices

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Revision 3978 - Directory Listing
Modified Thu Sep 20 04:36:17 2012 UTC (10 years, 4 months ago) by caltinay

Make sympy optional as it was intended initially. Trying to instantiate anything
from symbolic will raise an exception if sympy is not available.

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Revision 3976 - Directory Listing
Modified Thu Sep 20 03:26:47 2012 UTC (10 years, 4 months ago) by caltinay

fixed python-2.7'ism.

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Revision 3975 - Directory Listing
Modified Thu Sep 20 01:54:06 2012 UTC (10 years, 4 months ago) by caltinay

Merged symbolic branch into trunk. Curious what daniel and spartacus have to
say...

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Revision 3928 - Directory Listing
Modified Mon Jul 9 23:23:43 2012 UTC (10 years, 7 months ago) by jfenwick

Do not allow attempts to setValue using a Locator which does not match the funcionSpace of the Data

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Revision 3922 - Directory Listing
Modified Mon Jul 9 02:19:51 2012 UTC (10 years, 7 months ago) by jfenwick

Adds setvalue to locator
Addresses mantis #531

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Revision 3911 - Directory Listing
Modified Thu Jun 14 01:01:03 2012 UTC (10 years, 7 months ago) by jfenwick

Copyright changes

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Revision 3910 - Directory Listing
Modified Thu Jun 14 00:45:03 2012 UTC (10 years, 7 months ago) by gross

Small bug fixed.

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Revision 3909 - Directory Listing
Modified Wed Jun 13 07:03:06 2012 UTC (10 years, 7 months ago) by gross

darcy solver removes hydrostatic pressure from problem now

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Revision 3906 - Directory Listing
Modified Thu Jun 7 11:00:50 2012 UTC (10 years, 8 months ago) by jfenwick

Disable AMG on MPI builds

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Revision 3905 - Directory Listing
Modified Tue Jun 5 08:33:41 2012 UTC (10 years, 8 months ago) by gross

length scale changed

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Revision 3892 - Directory Listing
Modified Tue Apr 10 08:57:23 2012 UTC (10 years, 10 months ago) by jfenwick

Merged changes across from the attempt2 branch.
This version builds and passes python2 tests.
It also passes most python3 tests.

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Revision 3885 - Directory Listing
Modified Wed Apr 4 22:12:26 2012 UTC (10 years, 10 months ago) by gross

some fix in AMG

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Revision 3883 - Directory Listing
Modified Mon Mar 26 03:24:14 2012 UTC (10 years, 10 months ago) by caltinay

Modified dlopenflags in escript's init module so newer MKL libraries can
successfully load support libraries.

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Revision 3852 - Directory Listing
Modified Thu Mar 1 05:34:52 2012 UTC (10 years, 11 months ago) by jfenwick

Correcting some indent errors

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Revision 3822 - Directory Listing
Modified Mon Feb 13 06:22:06 2012 UTC (10 years, 11 months ago) by gross

Transport solver supports now constraints (except the linear CN)

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Revision 3807 - Directory Listing
Modified Mon Feb 6 06:14:25 2012 UTC (11 years ago) by gross

LINEAR_CRANK_NICOLSON solver added

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Revision 3793 - Directory Listing
Modified Wed Feb 1 07:39:43 2012 UTC (11 years ago) by gross

new implementation of FCT solver with some modifications to the python interface

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Revision 3788 - Directory Listing
Modified Mon Jan 30 04:41:33 2012 UTC (11 years ago) by caltinay

Fixed showEscriptParams() which hasn't worked for 2 years or so.

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Revision 3786 - Directory Listing
Modified Wed Jan 25 04:46:39 2012 UTC (11 years ago) by jfenwick

Made 2D interpolation call consistant with 1D and 3D.
Doco updates later

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Revision 3771 - Directory Listing
Modified Wed Jan 18 02:30:48 2012 UTC (11 years ago) by jfenwick

First stage of 2.6/3 conversion

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Revision 3676 - Directory Listing
Modified Thu Nov 17 03:52:25 2011 UTC (11 years, 2 months ago) by jfenwick

Removed some debug text
Corrected some dudley where they should not have been.
Set savanna to build shared for now

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Revision 3675 - Directory Listing
Modified Thu Nov 17 00:53:38 2011 UTC (11 years, 2 months ago) by jfenwick

pasowrap joins the trunk.

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Revision 3648 - Directory Listing
Modified Thu Nov 3 08:13:31 2011 UTC (11 years, 3 months ago) by gross

typos fixed

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Revision 3630 - Directory Listing
Modified Wed Oct 19 03:04:53 2011 UTC (11 years, 3 months ago) by gross

minor fix to dary flux

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Revision 3620 - Directory Listing
Modified Wed Oct 5 06:06:14 2011 UTC (11 years, 4 months ago) by gross

bug fixed

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Revision 3619 - Directory Listing
Modified Wed Oct 5 03:53:34 2011 UTC (11 years, 4 months ago) by gross

some rescaling of permeability in the darcy solver added

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Revision 3584 - Directory Listing
Modified Tue Sep 6 11:08:34 2011 UTC (11 years, 5 months ago) by jfenwick

Removing Locator.setValue for now

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Revision 3582 - Directory Listing
Modified Tue Sep 6 02:02:17 2011 UTC (11 years, 5 months ago) by gross

some clarification of the documentation on the Stokes solver.

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Revision 3577 - Directory Listing
Modified Mon Sep 5 08:22:52 2011 UTC (11 years, 5 months ago) by gross

getFLux fixed and tests added.

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Revision 3574 - Directory Listing
Modified Fri Sep 2 07:19:31 2011 UTC (11 years, 5 months ago) by jfenwick

Added setValue to locator.
Some unit tests added but they aren't being triggered for some reason

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Revision 3569 - Directory Listing
Modified Thu Sep 1 02:42:36 2011 UTC (11 years, 5 months ago) by gross

Darcy flow solver and docu reviewed. Coupled solvers have been removed.

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Revision 3566 - Directory Listing
Modified Tue Aug 30 07:37:55 2011 UTC (11 years, 5 months ago) by gross

small fix to units

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Revision 3549 - Directory Listing
Modified Tue Aug 9 06:40:06 2011 UTC (11 years, 6 months ago) by jfenwick

Fix for issue #617
A couple of extra tests to make sure it doesn't happen again

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Revision 3522 - Directory Listing
Modified Tue May 24 00:57:58 2011 UTC (11 years, 8 months ago) by gross

(almost) full support for Point elements

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Revision 3515 - Directory Listing
Modified Thu May 19 08:20:57 2011 UTC (11 years, 8 months ago) by gross

some first work for DiracFunctions

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Revision 3510 - Directory Listing
Modified Fri May 13 06:09:49 2011 UTC (11 years, 9 months ago) by gross

some fixes for the compilation without BOOMERAMG

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Revision 3508 - Directory Listing
Modified Fri May 13 04:15:29 2011 UTC (11 years, 9 months ago) by lgao

Add Boomer AMG as a new preconditioner 
Can be used by .setPreconditioner(SolverOptions.BOOMERAMG)
and the following parallel coarsening method can be 
used together with Boomer AMG preconditioner: 
  .setCoarsening(SolverOptions.CIJP_FIXED_RANDOM_COARSENING)
  .setCoarsening(SolverOptions.CIJP_COARSENING)
  .setCoarsening(SolverOptions.FALGOUT_COARSENING)
  .setCoarsening(SolverOptions.PMIS_COARSENING)
  .setCoarsening(SolverOptions.HMIS_COARSENING)

Note that Boomer AMG is only available when MPI is enabled.  

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Revision 3502 - Directory Listing
Modified Thu Apr 28 05:06:24 2011 UTC (11 years, 9 months ago) by gross

Darcy flow solver is now supporting 4 solvers

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Revision 3501 - Directory Listing
Modified Wed Apr 13 04:07:53 2011 UTC (11 years, 10 months ago) by gross

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Revision 3500 - Directory Listing
Modified Mon Apr 11 03:09:06 2011 UTC (11 years, 10 months ago) by gross

GMRES solver for new DarcyFlux solver added

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Revision 3499 - Directory Listing
Modified Fri Apr 8 00:14:35 2011 UTC (11 years, 10 months ago) by gross

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Revision 3494 - Directory Listing
Modified Tue Apr 5 04:12:08 2011 UTC (11 years, 10 months ago) by gross

more coal seam gas

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Revision 3485 - Directory Listing
Modified Thu Mar 24 22:44:40 2011 UTC (11 years, 10 months ago) by gross

some compile fixes

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Revision 3462 - Directory Listing
Modified Mon Feb 7 02:01:50 2011 UTC (12 years ago) by caltinay

Removed debug output.

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Revision 3452 - Directory Listing
Modified Tue Jan 25 01:53:57 2011 UTC (12 years ago) by caltinay

Fixed building cookbook, including toc (scons scans for keywords in the tex
files but not in .cls as it seems).
Also fixed a few epydoc warnings and typos.

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Revision 3440 - Directory Listing
Modified Fri Jan 14 00:04:53 2011 UTC (12 years ago) by gross

a second AMG interpolation implemented

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Revision 3436 - Directory Listing
Modified Mon Jan 10 02:06:07 2011 UTC (12 years, 1 month ago) by plaub

Added/modified AMG tests:

  - "self.failUnless(...)" became "self.assertTrue(...)"
    because fail* is soon to be deprecated,
  - fixed logical error in self.assertTrue argument,
  - added another test, 'testSquare'.

Added some print statements to AMG.c in verbose mode to
identify which of the stopping conditions were fulfilled.

Changed default AMG parameters for 'setNumPreSweeps' and 
'setNumPostSweeps' to 1 (huge speed improvment).

P.S Beware of bugs in the above code; I have only proved 
it correct, not tried it... Jokes!

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Revision 3435 - Directory Listing
Modified Fri Jan 7 03:40:39 2011 UTC (12 years, 1 month ago) by gross

initial value changed

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Revision 3434 - Directory Listing
Modified Fri Jan 7 03:35:58 2011 UTC (12 years, 1 month ago) by gross

initial value changed

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Revision 3433 - Directory Listing
Modified Fri Jan 7 02:39:05 2011 UTC (12 years, 1 month ago) by gross

initial value changed

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Revision 3432 - Directory Listing
Modified Fri Jan 7 01:32:07 2011 UTC (12 years, 1 month ago) by jfenwick

Made import statements a bit more specific to clean up the epydoc

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Revision 3431 - Directory Listing
Modified Fri Jan 7 01:19:21 2011 UTC (12 years, 1 month ago) by gross

redundant setMinCoarseMatrixSparsity removed.

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Revision 3402 - Directory Listing
Modified Tue Dec 7 07:36:12 2010 UTC (12 years, 2 months ago) by gross

AMG support now block size > 3 (requires clapack or MKL).

additional diagnostics for AMG 

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Revision 3379 - Directory Listing
Modified Wed Nov 24 04:48:49 2010 UTC (12 years, 2 months ago) by gross

some clarification on lumping

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Revision 3378 - Directory Listing
Modified Tue Nov 23 05:09:25 2010 UTC (12 years, 2 months ago) by caltinay

Pass dictionary of data objects to EscriptDataset as kwargs in DataManager.

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Revision 3369 - Directory Listing
Modified Fri Nov 19 06:26:11 2010 UTC (12 years, 2 months ago) by gross

matrix balance introduced in paso

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Revision 3368 - Directory Listing
Modified Fri Nov 19 05:59:46 2010 UTC (12 years, 2 months ago) by jfenwick

3d interpolateTable support.
New more generic interface for table interpolation.
tests and doco updated

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Revision 3360 - Directory Listing
Modified Thu Nov 18 00:20:21 2010 UTC (12 years, 2 months ago) by jfenwick

Fix some epydoc errors
Fixed issue 564
removed minimize.py since it hasn't worked in who knows how long

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Revision 3358 - Directory Listing
Modified Wed Nov 17 08:02:32 2010 UTC (12 years, 2 months ago) by gross

a more flexiblae version of safeDiv

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Revision 3352 - Directory Listing
Modified Tue Nov 16 03:58:09 2010 UTC (12 years, 2 months ago) by gross

exposure of AMG options

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Revision 3349 - Directory Listing
Modified Mon Nov 15 05:09:56 2010 UTC (12 years, 2 months ago) by caltinay

escript now supports out-of-tree builds.
All build and test files are now created under a user-definable build_dir
directory.
This also fixes issue 291.
Removed most svn:ignore props since they are no longer required.

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Revision 3344 - Directory Listing
Modified Thu Nov 11 23:26:52 2010 UTC (12 years, 3 months ago) by caltinay

Phew!
-escript, finley, and dudley now uses weipa's saveVTK implementation
-moved tests from finley to weipa accordingly; dudley still to do
-rebaselined all test files
-fixed a few issues in weipa.saveVTK, e.g. saving metadata without schema
-added a deprecation warning to esys.escript.util.saveVTK
-todo: change doco, tests and other places to use weipa.saveVTK

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Revision 3283 - Directory Listing
Modified Mon Oct 18 22:39:28 2010 UTC (12 years, 3 months ago) by gross

AMG reengineered, BUG is Smoother fixed.

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Revision 3269 - Directory Listing
Modified Wed Oct 13 03:21:50 2010 UTC (12 years, 4 months ago) by jfenwick

Fixed some intel compiler warnings.
Put linearPDEs back the way it was and present a common interface for dudley and finley (as per Lutz)

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Revision 3267 - Directory Listing
Modified Wed Oct 13 02:12:06 2010 UTC (12 years, 4 months ago) by caltinay

Renamed restarts.py to datamanager.py, added a method to explicitly set the
domain without adding data. Calling export() without domain/data will now
output a warning. Some additional cleanup.

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Revision 3259 - Directory Listing
Modified Mon Oct 11 01:48:14 2010 UTC (12 years, 4 months ago) by jfenwick

Merging dudley and scons updates from branches

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Revision 3201 - Directory Listing
Modified Thu Sep 23 06:54:18 2010 UTC (12 years, 4 months ago) by gross

bug in meanValue fixed.

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Revision 3192 - Directory Listing
Modified Fri Sep 17 04:02:57 2010 UTC (12 years, 4 months ago) by caltinay

- weipa's saveVTK will now save multiple files if the data objects to write are
  not on the same mesh.
- the save* methods now also add the appropriate file extension if not already
  supplied

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Revision 3188 - Directory Listing
Modified Thu Sep 16 04:36:38 2010 UTC (12 years, 4 months ago) by caltinay

Fixed deletion of old restart directories with a checkpoint freq>1.

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Revision 3186 - Directory Listing
Modified Thu Sep 16 01:23:53 2010 UTC (12 years, 4 months ago) by caltinay

Added checkpoint frequency setting to DataManager so that visualisation files
can be created independent of restart files. Also removed the overhead of
creating an EscriptDataset instance for the restart-only case.

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Revision 3158 - Directory Listing
Modified Mon Sep 6 06:09:11 2010 UTC (12 years, 5 months ago) by gross

GS and Jacobi are now used through the same interface.

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Revision 3147 - Directory Listing
Modified Fri Sep 3 02:03:05 2010 UTC (12 years, 5 months ago) by caltinay

Don't clear domain on error. Moved adding Metadata-tags to the C++ level.

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Revision 3139 - Directory Listing
Modified Thu Sep 2 06:37:43 2010 UTC (12 years, 5 months ago) by caltinay

Fixed a typo.

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Revision 3133 - Directory Listing
Modified Thu Sep 2 02:04:29 2010 UTC (12 years, 5 months ago) by caltinay

Added methods to set mesh labels and units to DataManager.

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Revision 3132 - Directory Listing
Modified Thu Sep 2 01:48:31 2010 UTC (12 years, 5 months ago) by caltinay

Removed unused variable.

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Revision 3131 - Directory Listing
Modified Thu Sep 2 01:40:47 2010 UTC (12 years, 5 months ago) by caltinay

DataManager now uses Python magic to figure out how to load the domain without
hardcoding anything finley-specific.

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Revision 3128 - Directory Listing
Modified Wed Sep 1 03:54:09 2010 UTC (12 years, 5 months ago) by caltinay

-Added mesh axis label/unit and variable unit support to weipa's Silo writer
-Created EscriptDataset python wrapper
-Some code cleanup and a ghost zone fix for the VisIt interface

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Revision 3111 - Directory Listing
Modified Thu Aug 26 06:49:42 2010 UTC (12 years, 5 months ago) by gross

some diagnostics for time step backtracing added

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Revision 3110 - Directory Listing
Modified Thu Aug 26 05:42:18 2010 UTC (12 years, 5 months ago) by caltinay

Fixed a typo.

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Revision 3109 - Directory Listing
Modified Thu Aug 26 04:33:18 2010 UTC (12 years, 5 months ago) by caltinay

Added accessor for the simulation cycle and log which directory was used to
restart.

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Revision 3106 - Directory Listing
Modified Wed Aug 25 08:15:38 2010 UTC (12 years, 5 months ago) by caltinay

Fixed export when 'work_dir' is set to sth other than the current dir.

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Revision 3102 - Directory Listing
Modified Tue Aug 24 06:14:21 2010 UTC (12 years, 5 months ago) by caltinay

Inject the DataManager class to the escript namespace.

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Revision 3101 - Directory Listing
Modified Tue Aug 24 06:08:12 2010 UTC (12 years, 5 months ago) by caltinay

weipa's saveVTK now stores metadata schema & string as expected.

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Revision 3096 - Directory Listing
Modified Thu Aug 19 01:40:52 2010 UTC (12 years, 5 months ago) by caltinay

-New VisIt simulation control interface in weipa (uses VisIt's simv2)
-Rewrote restarts.py to be a more generic data manager for restarts and exports
-Removed weipa python file since the functionality is now handled by restarts.py

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Revision 3094 - Directory Listing
Modified Fri Aug 13 08:38:06 2010 UTC (12 years, 6 months ago) by gross

The MPI and sequational GAUSS_SEIDEL have been merged.
The couring and main diagonal pointer is now manged by the patternm which means that they are calculated once only even if the preconditioner is deleted.

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Revision 3084 - Directory Listing
Modified Wed Aug 4 03:26:50 2010 UTC (12 years, 6 months ago) by gross

small bug fixed.

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Revision 3081 - Directory Listing
Modified Tue Aug 3 05:36:42 2010 UTC (12 years, 6 months ago) by gross

a light restart manager added.

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Revision 3074 - Directory Listing
Modified Tue Jul 27 01:47:45 2010 UTC (12 years, 6 months ago) by gross

tolerance for PCG relaxed.

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Revision 3071 - Directory Listing
Modified Wed Jul 21 05:37:30 2010 UTC (12 years, 6 months ago) by gross

new darcy flux

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Revision 3059 - Directory Listing
Modified Tue Jul 6 03:31:48 2010 UTC (12 years, 7 months ago) by jfenwick

Fix error message in launcher. Allow non-data objects to be passed to condEval

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Revision 3051 - Directory Listing
Modified Tue Jun 29 00:45:49 2010 UTC (12 years, 7 months ago) by lgao

Hybrid MPI/OpenMP versioned Gauss_Seidel preconditioner is added. 
To use it, use "SolverOptions.GAUSS_SEIDEL_MPI" in python script. 

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Revision 3018 - Directory Listing
Modified Thu Apr 29 21:35:24 2010 UTC (12 years, 9 months ago) by gross

some stupid lines removed

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Revision 2994 - Directory Listing
Modified Tue Mar 23 06:13:14 2010 UTC (12 years, 10 months ago) by artak

AMG levels maximum set 5

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Revision 2988 - Directory Listing
Modified Tue Mar 16 06:14:30 2010 UTC (12 years, 10 months ago) by gross

C-level lumping switched on

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Revision 2987 - Directory Listing
Modified Tue Mar 16 01:32:43 2010 UTC (12 years, 10 months ago) by gross

FCT solver rewritten

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Revision 2962 - Directory Listing
Modified Wed Mar 3 01:03:56 2010 UTC (12 years, 11 months ago) by gross

bar as unit added

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Revision 2960 - Directory Listing
Modified Tue Mar 2 07:54:11 2010 UTC (12 years, 11 months ago) by gross

new DarcyFlux solver

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Revision 2954 - Directory Listing
Modified Fri Feb 26 06:09:47 2010 UTC (12 years, 11 months ago) by gross

bug introduced by a smart programmer to the Locator has been fixed?

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Revision 2948 - Directory Listing
Modified Thu Feb 25 04:54:30 2010 UTC (12 years, 11 months ago) by gross

a new almost completed version of the cookbook

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Revision 2941 - Directory Listing
Modified Mon Feb 22 05:17:43 2010 UTC (12 years, 11 months ago) by caltinay

saveESD now doesn't store the absolute path to the files in the ESD file so
the whole dataset can be moved easily.

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Revision 2938 - Directory Listing
Modified Thu Feb 18 00:24:35 2010 UTC (12 years, 11 months ago) by caltinay

saveESD: Add a warning about the experimental status of ESD.
Save the ESD file within the data directory.

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Revision 2923 - Directory Listing
Modified Thu Feb 4 04:05:36 2010 UTC (13 years ago) by jfenwick

Bringing non-release specific things from stage3.1 r2922 back to trunk

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Revision 2912 - Directory Listing
Modified Wed Feb 3 03:31:24 2010 UTC (13 years ago) by gross

some missing functions

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Revision 2905 - Directory Listing
Modified Tue Feb 2 04:26:42 2010 UTC (13 years ago) by gross

some missing files.

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Revision 2881 - Directory Listing
Modified Thu Jan 28 02:03:15 2010 UTC (13 years ago) by jfenwick

Don't panic.
Updating copyright stamps

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Revision 2867 - Directory Listing
Modified Fri Jan 22 06:28:02 2010 UTC (13 years ago) by gross

now option -i is used if no script is given

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Revision 2863 - Directory Listing
Modified Thu Jan 21 07:18:37 2010 UTC (13 years ago) by gross

fix for mantis 454

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Revision 2862 - Directory Listing
Modified Thu Jan 21 04:45:39 2010 UTC (13 years ago) by gross

more review in the cookbook

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Revision 2858 - Directory Listing
Modified Tue Jan 19 01:07:52 2010 UTC (13 years ago) by gross

small fixes with the reduced solution for the transport problem

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Revision 2857 - Directory Listing
Modified Mon Jan 18 07:44:42 2010 UTC (13 years ago) by gross

test for ApproximationOrder added and Transport type problem now choose reduced when necessary only.

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Revision 2850 - Directory Listing
Modified Fri Jan 15 07:14:25 2010 UTC (13 years ago) by gross

the powerlaw is working again. tests are switched on again.

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Revision 2843 - Directory Listing
Modified Thu Jan 14 05:51:28 2010 UTC (13 years ago) by gross

new compressible solver

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Revision 2835 - Directory Listing
Modified Mon Jan 11 01:23:52 2010 UTC (13 years, 1 month ago) by artak

Default smoother set to Gauss-Seidel. This one more robust than jacobi, but jacobi is faster.

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Revision 2828 - Directory Listing
Modified Tue Dec 22 01:24:40 2009 UTC (13 years, 1 month ago) by artak

Smoother for AMG now can be selected from python. Now only Jacobi and Gauss-Seidel are available as smoothers.

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Revision 2816 - Directory Listing
Modified Thu Dec 10 02:09:43 2009 UTC (13 years, 2 months ago) by artak

Standard coarsening is added to options list.

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Revision 2793 - Directory Listing
Modified Tue Dec 1 06:10:10 2009 UTC (13 years, 2 months ago) by gross

some new util functions

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Revision 2760 - Directory Listing
Modified Thu Nov 19 05:22:45 2009 UTC (13 years, 2 months ago) by artak

The first version of the new AMG preconditioner. It need a lot of polishing for efficiency. Old AMG now called AMLI preconditioner.

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Revision 2748 - Directory Listing
Modified Tue Nov 17 07:32:59 2009 UTC (13 years, 2 months ago) by gross

Macro elements are implemented now. VTK writer for macro elements still needs testing.

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Revision 2745 - Directory Listing
Modified Tue Nov 17 04:23:02 2009 UTC (13 years, 2 months ago) by jfenwick

Added getInfLocator and getSupLocator to pdetools.
This means if you want to use them, you will need to import them.
These methods return a locator to a point with the smallest/largest value.

Added resolve() and delay() to utils.
Now you can do things like:

d=delay(v)
..
..
z=resolve(d+1)

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Revision 2742 - Directory Listing
Modified Thu Nov 12 06:03:37 2009 UTC (13 years, 3 months ago) by jfenwick

Merging changes from the lapack branch.

The inverse() operation has been moved into c++. [No lazy support for this operation yet.]
Optional Lapack support has been added for matrices larger than 3x3. 
service0 is set to use mkl_lapack.

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Revision 2738 - Directory Listing
Modified Fri Nov 6 05:33:13 2009 UTC (13 years, 3 months ago) by jfenwick

Taipan and DataVector use size_type (currently long) internally to talk 
about sizes.
[A lot more work needs to be done on this].
Exceptions now give nicer messages and output the problematic numbers.

Some minor doco errors fixed.

escript.util.mkDir
Now checks to see if the pathname already exists as a non-directory.
On suggestion from slanger it now calls makedirs.

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Revision 2719 - Directory Listing
Modified Wed Oct 14 06:38:03 2009 UTC (13 years, 3 months ago) by gross

a new Stokes solver added

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Revision 2693 - Directory Listing
Modified Tue Sep 29 05:47:45 2009 UTC (13 years, 4 months ago) by artak

sorry python Indentation Error, fixed 

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Revision 2692 - Directory Listing
Modified Tue Sep 29 05:35:31 2009 UTC (13 years, 4 months ago) by artak

minor typo

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Revision 2691 - Directory Listing
Modified Tue Sep 29 05:30:27 2009 UTC (13 years, 4 months ago) by artak

Projector class had getSolverOptions(), but was returning null, so changed to return correct solver options.

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Revision 2689 - Directory Listing
Modified Tue Sep 29 05:22:51 2009 UTC (13 years, 4 months ago) by artak

getSolverOptionsDiv was returning Pressure options instead of Div equation options

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Revision 2688 - Directory Listing
Modified Tue Sep 29 05:19:43 2009 UTC (13 years, 4 months ago) by artak

changes to default threshold values

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Revision 2683 - Directory Listing
Modified Tue Sep 29 02:20:22 2009 UTC (13 years, 4 months ago) by gross

documentation for pycad added.

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Revision 2676 - Directory Listing
Modified Mon Sep 21 08:06:37 2009 UTC (13 years, 4 months ago) by gross

FaultSystem: MaxValue and MinValue return now a Locator. This makes it possible to extract values of from other data objects at the location of the min/max value

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Revision 2675 - Directory Listing
Modified Mon Sep 21 02:32:17 2009 UTC (13 years, 4 months ago) by gross

getMinValue added to the fault system.

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Revision 2665 - Directory Listing
Modified Wed Sep 16 02:56:02 2009 UTC (13 years, 4 months ago) by gross

clarification in the fault depth vector

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Revision 2663 - Directory Listing
Modified Tue Sep 15 06:04:44 2009 UTC (13 years, 4 months ago) by gross

finally there is a 3D version for the fault system class

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Revision 2654 - Directory Listing
Modified Tue Sep 8 07:11:12 2009 UTC (13 years, 5 months ago) by gross

2D fault systems are now working. 3D still needs work.

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Revision 2649 - Directory Listing
Modified Mon Sep 7 03:33:55 2009 UTC (13 years, 5 months ago) by gross

Some small fixes in FaultSystem

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Revision 2647 - Directory Listing
Modified Fri Sep 4 05:25:25 2009 UTC (13 years, 5 months ago) by gross

fault system add. There is still an example for the usage missing.

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Revision 2644 - Directory Listing
Modified Wed Sep 2 04:14:03 2009 UTC (13 years, 5 months ago) by jfenwick

Add unit tests for saveDataCSV which should be ready for use now.
Keyword args are now output in sorted order.

Removed some unneeded functions.

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Revision 2635 - Directory Listing
Modified Thu Aug 27 04:54:41 2009 UTC (13 years, 5 months ago) by jfenwick

A bunch of changes related to saveDataCSV.
[Not completed or unit tested yet]

Added saveDataCSV to util.py
AbstractDomain (and MeshAdapter) have a commonFunctionSpace method to 
take a group of FunctionSpaces and return something they can all be interpolated to.

Added pointToStream() in DataTypes to help print points.

added actsConstant() to data - required because DataConstant doesn't store samples the same way other Data do.

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Revision 2627 - Directory Listing
Modified Mon Aug 24 01:57:34 2009 UTC (13 years, 5 months ago) by gross

some bugs in pycad fixed.

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Revision 2625 - Directory Listing
Modified Fri Aug 21 06:30:25 2009 UTC (13 years, 5 months ago) by jfenwick

Merging changes from new doco branch.
All docstrings are now in reStructured text.
A few email addresses have been fixes as well.

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Revision 2620 - Directory Listing
Modified Thu Aug 20 06:24:00 2009 UTC (13 years, 5 months ago) by gross

some small additions to pycad to make life a bit easier.

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Revision 2599 - Directory Listing
Modified Fri Aug 7 00:16:02 2009 UTC (13 years, 6 months ago) by caltinay

saveESD: added option to save mesh at each timestep if required.

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Revision 2596 - Directory Listing
Modified Thu Aug 6 03:09:03 2009 UTC (13 years, 6 months ago) by lgao

Add new diagnostic information: "net time" (the execution time of solver, excluding the setup time for solver and the execution time of preconditioner)

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Revision 2564 - Directory Listing
Modified Tue Jul 28 04:46:38 2009 UTC (13 years, 6 months ago) by gross

reduced PDE solutions added to topography

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Revision 2563 - Directory Listing
Modified Tue Jul 28 03:50:45 2009 UTC (13 years, 6 months ago) by gross

reengineered version of the mountain class so it becomes easier to use for the convection code

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Revision 2551 - Directory Listing
Modified Thu Jul 23 09:19:15 2009 UTC (13 years, 6 months ago) by gross

a problem with the sparse matrix unrolling fixed.

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Revision 2549 - Directory Listing
Modified Mon Jul 20 06:43:47 2009 UTC (13 years, 6 months ago) by jfenwick

Remainder of copyright date fixes

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Revision 2548 - Directory Listing
Modified Mon Jul 20 06:20:06 2009 UTC (13 years, 6 months ago) by jfenwick

Updating copyright notices

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Revision 2535 - Directory Listing
Modified Thu Jul 16 23:39:58 2009 UTC (13 years, 6 months ago) by gross

LinearPDE is now updating stiffness matrix and right hand side even only geometry is modified. fix for 333

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Revision 2534 - Directory Listing
Modified Thu Jul 16 06:49:19 2009 UTC (13 years, 6 months ago) by caltinay

Changed examples, tests and tutorials to save VTK files as .vtu instead .xml.
Visit doesn't know what to do with xml's and vtu is the proper extension
anyway.

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Revision 2533 - Directory Listing
Modified Wed Jul 15 05:57:01 2009 UTC (13 years, 6 months ago) by gross

finley delivers now a status identifier of the mesh.

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Revision 2526 - Directory Listing
Modified Wed Jul 8 05:52:06 2009 UTC (13 years, 7 months ago) by caltinay

util: Updated saveESD to allow saving of time series. Combined with an update
of the visit plugin this fixes issue 325.

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Revision 2524 - Directory Listing
Modified Wed Jul 8 00:39:26 2009 UTC (13 years, 7 months ago) by artak

Minimum size of the coarsest level matrix option added to solver options

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Revision 2523 - Directory Listing
Modified Wed Jul 8 00:07:36 2009 UTC (13 years, 7 months ago) by jfenwick

Fixed bug in MPI form of mkDir

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Revision 2517 - Directory Listing
Modified Fri Jul 3 05:27:45 2009 UTC (13 years, 7 months ago) by jfenwick

Fixed bug in Locator

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Revision 2513 - Directory Listing
Modified Thu Jul 2 08:42:11 2009 UTC (13 years, 7 months ago) by gross

some fixes in wave.py example

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Revision 2502 - Directory Listing
Modified Tue Jun 30 05:49:22 2009 UTC (13 years, 7 months ago) by gross

tests for examples added. utest is not working yet.

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Revision 2499 - Directory Listing
Modified Mon Jun 29 04:31:00 2009 UTC (13 years, 7 months ago) by gross

new stand

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Revision 2498 - Directory Listing
Modified Mon Jun 29 04:25:23 2009 UTC (13 years, 7 months ago) by gross

new function MaskFromTag

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Revision 2486 - Directory Listing
Modified Tue Jun 23 03:38:54 2009 UTC (13 years, 7 months ago) by gross

a bit more info are printed for the DarcyFlux now.

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Revision 2484 - Directory Listing
Modified Mon Jun 22 04:22:19 2009 UTC (13 years, 7 months ago) by gross

numarray removed from docu; Locator revised.

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Revision 2479 - Directory Listing
Modified Thu Jun 18 06:50:37 2009 UTC (13 years, 7 months ago) by gross

paso returns now some diagnostics. SCSL has been removed.

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Revision 2474 - Directory Listing
Modified Tue Jun 16 06:32:15 2009 UTC (13 years, 7 months ago) by gross

linearPDEs has is now using the SolverOptions class to talk to PASO

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Revision 2473 - Directory Listing
Modified Mon Jun 15 02:21:07 2009 UTC (13 years, 7 months ago) by jfenwick

Change logging functions so I don't get confused about what they do.
Added parameter to name the log file if called directly.

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Revision 2471 - Directory Listing
Modified Thu Jun 11 23:33:06 2009 UTC (13 years, 8 months ago) by jfenwick

Fixed extract of ndarray from xml to properly return booleans.
Modified some strings which had numarray:: in them

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Revision 2470 - Directory Listing
Modified Thu Jun 11 08:32:32 2009 UTC (13 years, 8 months ago) by gross

SolverOption class added. It is not linked with anything.

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Revision 2468 - Directory Listing
Modified Thu Jun 11 02:55:51 2009 UTC (13 years, 8 months ago) by gross

some more work toward numpy

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Revision 2455 - Directory Listing
Modified Wed Jun 3 03:29:07 2009 UTC (13 years, 8 months ago) by jfenwick

Merging changes from numpy branch.

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Revision 2448 - Directory Listing
Modified Fri May 29 04:47:48 2009 UTC (13 years, 8 months ago) by ahallam

Week 9: implemented cosine taper for wave function, need to work on direct method without lumping, wave propagation velocity is still not correct

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Revision 2446 - Directory Listing
Modified Fri May 29 04:24:01 2009 UTC (13 years, 8 months ago) by gross

same adjustment of nameing

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Revision 2445 - Directory Listing
Modified Fri May 29 03:23:25 2009 UTC (13 years, 8 months ago) by gross

some improvement on convection which ios now working again

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Revision 2440 - Directory Listing
Modified Wed May 27 08:45:55 2009 UTC (13 years, 8 months ago) by gross

convection works now again.

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Revision 2438 - Directory Listing
Modified Tue May 26 02:26:52 2009 UTC (13 years, 8 months ago) by gross

new version of power law (blame Hans)

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Revision 2432 - Directory Listing
Modified Wed May 20 06:06:20 2009 UTC (13 years, 8 months ago) by gross

power law and incompressible flow is running now

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Revision 2431 - Directory Listing
Modified Wed May 20 03:39:57 2009 UTC (13 years, 8 months ago) by jfenwick

Added at the request of Dian.

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Revision 2428 - Directory Listing
Modified Tue May 19 04:04:11 2009 UTC (13 years, 8 months ago) by gross

problem for python2.4 fixed: IOError has no attribute message.

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Revision 2422 - Directory Listing
Modified Thu May 14 03:17:28 2009 UTC (13 years, 9 months ago) by gross

bug in testing saveVTK fixed

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Revision 2421 - Directory Listing
Modified Thu May 14 02:29:06 2009 UTC (13 years, 9 months ago) by gross

vtk writer supports now meta data and meta data schema

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Revision 2415 - Directory Listing
Modified Wed May 13 02:48:39 2009 UTC (13 years, 9 months ago) by gross

FileWriter added: this class takes care of writing data which are global in MPI to a file. It is recommended to use this class rather then the build in open as it takes care of the case of many processors.

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Revision 2403 - Directory Listing
Modified Wed Apr 29 06:08:18 2009 UTC (13 years, 9 months ago) by gross

units support Celsius, Farenheit and kelvin now

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Revision 2399 - Directory Listing
Modified Tue Apr 28 12:04:34 2009 UTC (13 years, 9 months ago) by gross

some improvements on units

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Revision 2398 - Directory Listing
Modified Tue Apr 28 04:41:53 2009 UTC (13 years, 9 months ago) by gross

first version of units in escript

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Revision 2386 - Directory Listing
Modified Wed Apr 15 03:54:25 2009 UTC (13 years, 9 months ago) by gross

some minor fixes

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Revision 2370 - Directory Listing
Modified Mon Apr 6 06:41:49 2009 UTC (13 years, 10 months ago) by gross

some modifications to docu for MPI

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Revision 2354 - Directory Listing
Modified Wed Apr 1 04:01:58 2009 UTC (13 years, 10 months ago) by gross

some modifications to the Darcy flux solver to make it faster and more robust.

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Revision 2351 - Directory Listing
Modified Tue Mar 31 08:26:41 2009 UTC (13 years, 10 months ago) by gross

some fixes in the transport solver

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Revision 2349 - Directory Listing
Modified Mon Mar 30 08:14:23 2009 UTC (13 years, 10 months ago) by gross

first version of escript command: no MPI support yet.

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Revision 2344 - Directory Listing
Modified Mon Mar 30 02:13:58 2009 UTC (13 years, 10 months ago) by jfenwick

Change __url__ to launchpad site

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Revision 2337 - Directory Listing
Modified Thu Mar 26 07:07:42 2009 UTC (13 years, 10 months ago) by gross

Transport class uses now useBackwardEuler rather than the mysterious theta.

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Revision 2325 - Directory Listing
Modified Thu Mar 19 05:32:13 2009 UTC (13 years, 10 months ago) by gross

tests for Lame equation added.

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Revision 2323 - Directory Listing
Modified Thu Mar 19 04:23:32 2009 UTC (13 years, 10 months ago) by gross

test for Helmholtz added

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Revision 2305 - Directory Listing
Modified Mon Mar 16 00:19:41 2009 UTC (13 years, 10 months ago) by artak

verbose option is added

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Revision 2304 - Directory Listing
Modified Fri Mar 13 03:17:24 2009 UTC (13 years, 11 months ago) by gross

a more robust way of doing whereZero and whereNotZero.

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Revision 2303 - Directory Listing
Modified Fri Mar 13 01:34:36 2009 UTC (13 years, 11 months ago) by artak

This was the troublemaker for test failures on both MAC and Debian. I think numarry has a bug in memory managment. So we removed some numarray.array related lines in _givapp function and tests pass again.

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Revision 2301 - Directory Listing
Modified Thu Mar 12 01:35:26 2009 UTC (13 years, 11 months ago) by gross

test for power law added

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Revision 2300 - Directory Listing
Modified Wed Mar 11 08:17:57 2009 UTC (13 years, 11 months ago) by gross

a power law model. tests still need to be added and needs to be linked with an incompressible solver.

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Revision 2288 - Directory Listing
Modified Tue Feb 24 06:11:48 2009 UTC (13 years, 11 months ago) by gross

a new idea for the sacling factor

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Revision 2285 - Directory Listing
Modified Fri Feb 20 06:02:30 2009 UTC (13 years, 11 months ago) by jfenwick

Modified the escript python module.
If the escriptExitProfiling environment variable is set, then the 
contents of the status file from /proc will be copied to memescript.pid

This means we can log fun things like peak memory usage.

This only works on linux systems recent enough to have the status file.

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Revision 2284 - Directory Listing
Modified Fri Feb 20 02:10:59 2009 UTC (13 years, 11 months ago) by gross

soem small fixes.

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Revision 2279 - Directory Listing
Modified Tue Feb 17 10:51:12 2009 UTC (13 years, 11 months ago) by gross

mofification of the weighting factor

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Revision 2277 - Directory Listing
Modified Tue Feb 17 07:38:07 2009 UTC (13 years, 11 months ago) by gross

type fixed

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Revision 2267 - Directory Listing
Modified Thu Feb 12 06:18:45 2009 UTC (13 years, 11 months ago) by gross

weighting factor introduced.

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Revision 2264 - Directory Listing
Modified Wed Feb 11 06:48:28 2009 UTC (14 years ago) by gross

a new darcy flux solver.

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Revision 2261 - Directory Listing
Modified Tue Feb 10 08:38:53 2009 UTC (14 years ago) by gross

GMRES supports prconditioning from the right now.

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Revision 2259 - Directory Listing
Modified Tue Feb 10 01:49:44 2009 UTC (14 years ago) by jfenwick

Fixes errors due to feeding scalars and vectors into the same call to maximum.

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Revision 2255 - Directory Listing
Modified Mon Feb 9 06:10:13 2009 UTC (14 years ago) by gross

problem in maximum fixed.

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Revision 2251 - Directory Listing
Modified Fri Feb 6 06:50:39 2009 UTC (14 years ago) by gross

new compressible flow solver

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Revision 2245 - Directory Listing
Modified Wed Feb 4 06:27:59 2009 UTC (14 years ago) by gross

renaming to make _GMRESm visibale

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Revision 2237 - Directory Listing
Modified Tue Feb 3 06:14:19 2009 UTC (14 years ago) by gross

better method to du clipping

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Revision 2210 - Directory Listing
Modified Tue Jan 13 03:49:47 2009 UTC (14 years ago) by artak

First version of the mountains class.

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Revision 2208 - Directory Listing
Modified Mon Jan 12 06:37:07 2009 UTC (14 years, 1 month ago) by gross

more work on the dary solver 

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Revision 2200 - Directory Listing
Modified Thu Jan 8 23:55:40 2009 UTC (14 years, 1 month ago) by jfenwick

Fixed python string substitution in error messages for trace and transpose.
Added tests for invalid axis offsets for trace on the c++ side.

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Revision 2197 - Directory Listing
Modified Thu Jan 8 05:49:16 2009 UTC (14 years, 1 month ago) by gross

modifications to the way cosntraints are handeled in the Transport problem

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Revision 2188 - Directory Listing
Modified Tue Dec 23 04:24:03 2008 UTC (14 years, 1 month ago) by caltinay

Implemented new utility function saveESD() which takes care of dumping the
given data objects with their domain and creates an ESD file containing the
required information. This obsoletes the necessity to use esdcreate for single
timestep datasets.

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Revision 2169 - Directory Listing
Modified Wed Dec 17 03:08:58 2008 UTC (14 years, 1 month ago) by caltinay

Assorted spelling, grammar, whitespace and copy/paste error fixes (Part 2).
All epydoc warnings for these files have been fixed.
This commit should be a no-op.

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Revision 2158 - Directory Listing
Modified Mon Dec 15 07:17:47 2008 UTC (14 years, 1 month ago) by caltinay

Assorted spelling, grammar, whitespace and copy/paste error fixes (Part 1).
This commit should be a no-op.

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Revision 2156 - Directory Listing
Modified Mon Dec 15 05:09:02 2008 UTC (14 years, 1 month ago) by gross

some modifications to the iterative solver to make them easier to use. 
There are also improved versions of the Darcy flux solver and the incompressible solver.

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Revision 2142 - Directory Listing
Modified Tue Dec 9 06:22:57 2008 UTC (14 years, 2 months ago) by jfenwick

Added showEscriptParams to output a list of available params.

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Revision 2123 - Directory Listing
Modified Wed Dec 3 03:26:02 2008 UTC (14 years, 2 months ago) by gross

typo fixed

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Revision 2108 - Directory Listing
Modified Fri Nov 28 05:09:23 2008 UTC (14 years, 2 months ago) by gross

some minor changes to PCG and some extra suspicious characters.

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Revision 2100 - Directory Listing
Modified Wed Nov 26 08:13:00 2008 UTC (14 years, 2 months ago) by gross

This commit cleans up the incompressible solver and adds a DarcyFlux solver in model module. 
Some documentation for both classes has been added.
The convection code is only linear at the moment.

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Revision 2061 - Directory Listing
Modified Wed Nov 19 03:40:21 2008 UTC (14 years, 2 months ago) by jfenwick

Fixing some warnings from epydoc.
Disabled c++ signatures in python docstrings.
Removed references to Bruce in epydoc and the users guide.

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Revision 1956 - Directory Listing
Modified Mon Nov 3 05:08:42 2008 UTC (14 years, 3 months ago) by gross

bug fixed.

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Revision 1896 - Directory Listing
Modified Sun Oct 19 23:16:21 2008 UTC (14 years, 3 months ago) by gross

small fixes.

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Revision 1878 - Directory Listing
Modified Tue Oct 14 03:39:13 2008 UTC (14 years, 3 months ago) by gross

new version of JacobiFree Newton GMRES + test added.

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Revision 1874 - Directory Listing
Modified Mon Oct 13 05:15:55 2008 UTC (14 years, 4 months ago) by ksteube

num_equations -> numEquations

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Revision 1859 - Directory Listing
Modified Wed Oct 8 03:03:37 2008 UTC (14 years, 4 months ago) by gross

first version of testing for transport solver.

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Revision 1841 - Directory Listing
Modified Fri Oct 3 03:57:52 2008 UTC (14 years, 4 months ago) by gross

modification on LinearPDE class and a first version of Transport class

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Revision 1819 - Directory Listing
Modified Tue Sep 30 05:58:06 2008 UTC (14 years, 4 months ago) by artak

Firs version of symmetric Gauss-Seidel preconditioner with coloring

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Revision 1817 - Directory Listing
Modified Tue Sep 30 04:03:40 2008 UTC (14 years, 4 months ago) by ksteube

Install runmodel.py into bin
Remove obsolete script esysXML.py

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Revision 1811 - Directory Listing
Modified Thu Sep 25 23:11:13 2008 UTC (14 years, 4 months ago) by ksteube

Copyright updated in all files

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Revision 1809 - Directory Listing
Modified Thu Sep 25 06:43:44 2008 UTC (14 years, 4 months ago) by ksteube

Copyright updated in all python files

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Revision 1788 - Directory Listing
Modified Mon Sep 15 02:20:20 2008 UTC (14 years, 4 months ago) by gross

levelset in the way laurent did it.

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Revision 1787 - Directory Listing
Modified Mon Sep 15 01:36:34 2008 UTC (14 years, 4 months ago) by artak

MINRES solver is added to escript. Additional 16 tests are added to run_simplesolve for MINRES and TFQMR solvers

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Revision 1737 - Directory Listing
Modified Fri Aug 29 03:01:29 2008 UTC (14 years, 5 months ago) by gross

the MaskFromBoundaryTag function didn't make much sense. The argument function_space is replaced by domain.

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Revision 1719 - Directory Listing
Modified Thu Aug 21 06:24:29 2008 UTC (14 years, 5 months ago) by gross

robust function to normalize data object added

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Revision 1717 - Directory Listing
Modified Thu Aug 21 05:24:35 2008 UTC (14 years, 5 months ago) by gross

function to calculate value closest to given value added

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Revision 1716 - Directory Listing
Modified Thu Aug 21 05:03:49 2008 UTC (14 years, 5 months ago) by gross

getListOfTags method added to FunctionSpace class

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Revision 1705 - Directory Listing
Modified Thu Aug 14 05:56:40 2008 UTC (14 years, 5 months ago) by ksteube

Branch scons-dev is hereby closed.
Some parts of scons scripts have been re-written.

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Revision 1703 - Directory Listing
Modified Thu Aug 14 05:34:25 2008 UTC (14 years, 5 months ago) by artak

TFQMR solver is added to PASO solver. It is not parallelised yet.

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Revision 1679 - Directory Listing
Modified Wed Jul 30 00:09:12 2008 UTC (14 years, 6 months ago) by artak

now convection works for other solvers as well, besides PCG.

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Revision 1673 - Directory Listing
Modified Thu Jul 24 22:28:50 2008 UTC (14 years, 6 months ago) by gross

more algorithms for level set

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Revision 1661 - Directory Listing
Modified Mon Jul 21 22:08:27 2008 UTC (14 years, 6 months ago) by gross

some improvements on level set

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Revision 1659 - Directory Listing
Modified Fri Jul 18 02:28:13 2008 UTC (14 years, 6 months ago) by gross

some first version of a robust level set

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Revision 1639 - Directory Listing
Modified Mon Jul 14 08:55:25 2008 UTC (14 years, 6 months ago) by gross

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Revision 1625 - Directory Listing
Modified Thu Jul 10 23:55:31 2008 UTC (14 years, 7 months ago) by gross

interpolate accepts now float and numarray as argument

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Revision 1567 - Directory Listing
Modified Thu May 22 22:52:41 2008 UTC (14 years, 8 months ago) by ksteube

scons all_tests passes on Savanna with OMP=1 and OMP=4.
New boost for Savanna.
A few more cases of #s -> %s.

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Revision 1562 - Directory Listing
Modified Wed May 21 13:04:40 2008 UTC (14 years, 8 months ago) by gross

The algebraic upwinding with MPI. The case of boundary constraint needs still some attention. 

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Revision 1561 - Directory Listing
Modified Wed May 21 06:58:52 2008 UTC (14 years, 8 months ago) by ksteube

Added python method printParallelThreadCounts() to tell how many MPI CPUs and OpenMP threads we are using (for testing hybrid runs)

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Revision 1557 - Directory Listing
Modified Mon May 19 04:44:27 2008 UTC (14 years, 8 months ago) by artak

some changes to ArithmenticTuple class

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Revision 1554 - Directory Listing
Modified Fri May 9 02:50:49 2008 UTC (14 years, 9 months ago) by artak

minor changes

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Revision 1552 - Directory Listing
Modified Thu May 8 08:52:41 2008 UTC (14 years, 9 months ago) by gross

some changes to make the implementatiopn of a upwind MPI version easier

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Revision 1551 - Directory Listing
Modified Wed May 7 23:11:44 2008 UTC (14 years, 9 months ago) by artak

RILU canged to ILU0 to fix today's test failure

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Revision 1550 - Directory Listing
Modified Wed May 7 02:22:57 2008 UTC (14 years, 9 months ago) by artak

coupled method is added, but it's still not working

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Revision 1542 - Directory Listing
Modified Wed Apr 30 03:40:15 2008 UTC (14 years, 9 months ago) by artak

#s and #e replaced by %s and %e 

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Revision 1541 - Directory Listing
Modified Wed Apr 30 02:05:29 2008 UTC (14 years, 9 months ago) by ksteube

Changed #s to %s in print

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Revision 1527 - Directory Listing
Modified Tue Apr 29 00:52:01 2008 UTC (14 years, 9 months ago) by ksteube

Changed from printing doubles with %s to %e

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Revision 1519 - Directory Listing
Modified Tue Apr 22 03:45:36 2008 UTC (14 years, 9 months ago) by artak

Initial version of NewtonGMRES solver. Still to do: 1. The atol and rtol define globally. 2. Decide about N 

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Revision 1517 - Directory Listing
Modified Fri Apr 18 02:36:37 2008 UTC (14 years, 9 months ago) by artak

stopping criteriums are combined for GMRES,MINRES and TFQMR in stoppingcriterium2

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Revision 1514 - Directory Listing
Modified Wed Apr 16 00:15:44 2008 UTC (14 years, 9 months ago) by artak

default input parameter iter_restart for GMRES is set to 20

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Revision 1513 - Directory Listing
Modified Tue Apr 15 08:47:57 2008 UTC (14 years, 9 months ago) by gross

pragma ivdep removed. icc produced wrong code.

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Revision 1489 - Directory Listing
Modified Mon Apr 14 04:29:30 2008 UTC (14 years, 9 months ago) by artak

Initial version of TFQMR method

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Revision 1488 - Directory Listing
Modified Fri Apr 11 00:22:31 2008 UTC (14 years, 10 months ago) by artak

restart parameter is changed in GMRES(m)

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Revision 1486 - Directory Listing
Modified Thu Apr 10 00:10:50 2008 UTC (14 years, 10 months ago) by artak

minor

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Revision 1484 - Directory Listing
Modified Wed Apr 9 03:25:53 2008 UTC (14 years, 10 months ago) by artak

minor: PCG set as default solver

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Revision 1482 - Directory Listing
Modified Wed Apr 9 02:29:47 2008 UTC (14 years, 10 months ago) by artak

inital x taken into account in MINRES algorithm

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Revision 1481 - Directory Listing
Modified Wed Apr 9 00:45:47 2008 UTC (14 years, 10 months ago) by artak

initial version of MINRES algorithm

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Revision 1476 - Directory Listing
Modified Mon Apr 7 23:38:50 2008 UTC (14 years, 10 months ago) by gross

Jacobian-free Newton method added to Paso

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Revision 1475 - Directory Listing
Modified Mon Apr 7 05:13:21 2008 UTC (14 years, 10 months ago) by artak

Initial version of GMRES with restart

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Revision 1473 - Directory Listing
Modified Fri Apr 4 07:49:18 2008 UTC (14 years, 10 months ago) by gross

initial checkin for level set

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Revision 1470 - Directory Listing
Modified Thu Apr 3 05:17:54 2008 UTC (14 years, 10 months ago) by gross

bug in pressure definition fixed

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Revision 1469 - Directory Listing
Modified Thu Apr 3 05:16:56 2008 UTC (14 years, 10 months ago) by gross

additional stopping criterion added

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Revision 1467 - Directory Listing
Modified Wed Apr 2 08:10:37 2008 UTC (14 years, 10 months ago) by gross

a bit of reengineering.

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Revision 1465 - Directory Listing
Modified Wed Apr 2 03:28:25 2008 UTC (14 years, 10 months ago) by artak

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Revision 1423 - Directory Listing
Modified Wed Feb 27 04:28:48 2008 UTC (14 years, 11 months ago) by gross

interpoilation inserted

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Revision 1417 - Directory Listing
Modified Mon Feb 25 04:45:48 2008 UTC (14 years, 11 months ago) by gross

some more work on the transport solver.

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Revision 1414 - Directory Listing
Modified Thu Feb 14 10:01:43 2008 UTC (14 years, 11 months ago) by gross

a first verion of a Stokes solver

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Revision 1410 - Directory Listing
Modified Thu Feb 7 04:24:00 2008 UTC (15 years ago) by gross

a new version of the algebric upwinding a. flux limiter

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Revision 1400 - Directory Listing
Modified Thu Jan 24 06:04:31 2008 UTC (15 years ago) by gross

better test example for upwinding added

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Revision 1388 - Directory Listing
Modified Fri Jan 11 07:45:58 2008 UTC (15 years, 1 month ago) by trankine

And get the *(&(*&(* name right

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Revision 1387 - Directory Listing
Modified Fri Jan 11 07:45:26 2008 UTC (15 years, 1 month ago) by trankine
Original Path: temp/escript/py_src

Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

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Revision 1384 - Directory Listing
Modified Fri Jan 11 02:29:38 2008 UTC (15 years, 1 month ago) by phornby
Original Path: temp_trunk_copy/escript/py_src

Make a temp copy of the trunk before checking in the windows changes

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Revision 1374 - Directory Listing
Modified Tue Jan 8 09:37:55 2008 UTC (15 years, 1 month ago) by gross

some changes to get things going on the cognac.ivec.org.

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Revision 1357 - Directory Listing
Modified Thu Nov 29 08:39:32 2007 UTC (15 years, 2 months ago) by gross

interplote function returns now argument if it has requested function space

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Revision 1331 - Directory Listing
Modified Tue Oct 23 00:42:15 2007 UTC (15 years, 3 months ago) by gross

ArithmeticTuple added. It is useful for certain applications of PCG

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Revision 1330 - Directory Listing
Modified Mon Oct 22 04:54:49 2007 UTC (15 years, 3 months ago) by gross

more flexible stopping criterium for the PCG

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Revision 1312 - Directory Listing
Modified Mon Sep 24 06:18:44 2007 UTC (15 years, 4 months ago) by ksteube

The MPI branch is hereby closed. All future work should be in trunk.

Previously in revision 1295 I merged the latest changes to trunk into trunk-mpi-branch.
In this revision I copied all files from trunk-mpi-branch over the corresponding
trunk files. I did not use 'svn merge', it was a copy.

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Revision 1247 - Directory Listing
Modified Tue Aug 14 01:29:20 2007 UTC (15 years, 6 months ago) by ksteube

New python method getVersion() which returns the Subversion revision
from which escript was compiled

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Revision 1204 - Directory Listing
Modified Sat Jun 23 11:43:12 2007 UTC (15 years, 7 months ago) by gross

a frame for an improved lumping procedure added.

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Revision 1137 - Directory Listing
Modified Thu May 10 08:11:31 2007 UTC (15 years, 9 months ago) by gross

This version passes the tests on windows except for 

   * vtk
   * netCDF

The version needs to be tested on altix and linux

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Revision 1131 - Directory Listing
Modified Tue May 8 05:52:21 2007 UTC (15 years, 9 months ago) by gross

netcdf c++ interface removed

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Revision 1125 - Directory Listing
Modified Thu May 3 05:40:30 2007 UTC (15 years, 9 months ago) by ksteube

Print more convergence info in the verbose output

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Revision 1122 - Directory Listing
Modified Tue May 1 03:21:04 2007 UTC (15 years, 9 months ago) by gross

As the LinearPDE uses coefficients as reduced even if they are handed
over as full the projector runs into a problem when reduced and full
arguments are used in the same projector. Now the projector resets the
coefficients befor starting the projection.

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Revision 1118 - Directory Listing
Modified Tue Apr 24 08:55:04 2007 UTC (15 years, 9 months ago) by gross

problem with reset of faulty PDE rhs fixed.

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Revision 1107 - Directory Listing
Modified Thu Apr 19 02:14:18 2007 UTC (15 years, 9 months ago) by gross

Small bug in ReadMeh call fixed.
Test for typ of verbose argument in pdetools.SaddlePointSolver added.

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Revision 1106 - Directory Listing
Modified Thu Apr 19 01:54:57 2007 UTC (15 years, 9 months ago) by gross

I take it all back! Ignore the last check in.

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Revision 1105 - Directory Listing
Modified Thu Apr 19 01:10:49 2007 UTC (15 years, 9 months ago) by gross

The modification fixes a problem with the garbage collection in python. 
The problem seems that a default value of a method argument is seen as
being dependend on the the instance of the class. This produces a
circular dependence and can stop the garbage collection to delete the
object. The situation becomes in particulary bad if the class provides a
__del__ method as it is not clear where to break the circle.

We need to revisit all python classes in escript & Co to remove this
possible problem. 

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Revision 1072 - Directory Listing
Modified Thu Mar 29 06:44:30 2007 UTC (15 years, 10 months ago) by gross

PDE assemblage for reduced integration order + tests added.

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Revision 1044 - Directory Listing
Modified Mon Mar 19 07:29:31 2007 UTC (15 years, 10 months ago) by gross

clear name tagging is supported now.

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Revision 1042 - Directory Listing
Modified Mon Mar 19 03:50:34 2007 UTC (15 years, 10 months ago) by gross

a small fix which deals with the case that a Model class
does not take the argument debug.

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Revision 1020 - Directory Listing
Modified Mon Mar 12 10:12:36 2007 UTC (15 years, 11 months ago) by phornby

Added explicit destructors to all Exception classes.

Fixed an ifdef in TestCase.cpp

Made the conditional definition of M_PI in LocalOps.h
depend only on M_PI being undefined.

Replace dynamically dimensioned arrays in DataFactory & DataTagged with malloc.

sort() method of list does not take a named argument
(despite the manual's claims to the contary).

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Revision 990 - Directory Listing
Modified Wed Feb 21 04:27:52 2007 UTC (15 years, 11 months ago) by ksteube

Cleaned up the python in-line doc to make epydoc work better

Configured for shake71 to find NetCDF libraries

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Revision 980 - Directory Listing
Modified Mon Feb 19 05:12:38 2007 UTC (15 years, 11 months ago) by gross

bug in Simulation fixed.

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Revision 975 - Directory Listing
Modified Thu Feb 15 10:18:18 2007 UTC (15 years, 11 months ago) by gross

first steps towards restart in modelframe

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Revision 971 - Directory Listing
Modified Wed Feb 14 04:40:49 2007 UTC (15 years, 11 months ago) by ksteube

Had to undo commit to new MPI branch. The changes went into the original and
not the branch. The files committed here are exactly the same as revision 969.

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Revision 969 - Directory Listing
Modified Tue Feb 13 23:02:23 2007 UTC (15 years, 11 months ago) by ksteube

Parallelization using MPI for solution of implicit problems.

Parallelization for explicit problems has already been accomplished in
the main SVN branch.

This is incomplete and is not ready for use.

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Revision 964 - Directory Listing
Modified Tue Feb 13 05:10:26 2007 UTC (15 years, 11 months ago) by gross

The set/getRefVal functions of Data objects have been removed (mainly to avoid later problems with MPI).
Moreover, a faster access to the reference id of samples has been introduced. I don't think that anybody will
profit form this at this stage but it will allow a faster dump of data objects.

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Revision 954 - Directory Listing
Modified Fri Feb 9 08:56:14 2007 UTC (16 years ago) by gross

testing for completness if simulations improved.

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Revision 952 - Directory Listing
Modified Wed Feb 7 23:53:24 2007 UTC (16 years ago) by gross

testing of simulation completness improved.

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Revision 950 - Directory Listing
Modified Tue Feb 6 07:01:11 2007 UTC (16 years ago) by gross

escript data objects can now be saved to netCDF files, see http://www.unidata.ucar.edu/software/netcdf/.
Currently only constant data are implemented with expanded and tagged data to follow.
There are two new functions to dump a data object

   s=Data(...)
   s.dump(<filename>)

and to recover it

   s=load(<filename>, domain)

Notice that the function space of s is recovered but domain is still need. 

dump and load will replace archive and extract.

The installation needs now the netCDF installed. 

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Revision 944 - Directory Listing
Modified Tue Jan 30 08:57:37 2007 UTC (16 years ago) by gross

PropertySet added

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Revision 939 - Directory Listing
Modified Thu Jan 25 04:23:38 2007 UTC (16 years ago) by gross

bug in finley mesh reader fixed

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Revision 938 - Directory Listing
Modified Thu Jan 25 03:40:54 2007 UTC (16 years ago) by gross

the FinleyReade accepts now gmsh files (use format="gmsh")
and
Simulations are accepting Models only. Moreover, there is a test now
if a all Models targeted by a model in the simulation or a subsimulation
are included in  simulation or a subsimulation. 

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Revision 926 - Directory Listing
Modified Fri Jan 12 06:31:37 2007 UTC (16 years, 1 month ago) by gross

modelframe support dictonaries with fixed type of key and value. only writing implemented yet

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Revision 921 - Directory Listing
Modified Fri Jan 5 00:54:37 2007 UTC (16 years, 1 month ago) by gross

I have done some clarification on functions that allow to access individual data point values in a Data object. 
The term "data point number" is always local on a MPI process and referes to the value (data_point_in_sample, sample)
as a single identifyer (data_point_in_sample + sample * number_data_points_per_sample). a "global data point number"
referes to a tuple of a processour id and local data point number.

The function convertToNumArrayFromSampleNo has been removed now and convertToNumArrayFromDPNo renamed to getValueOfDataPoint.
There are two new functions:

   getNumberOfDataPoints
   setValueOfDataPoint

This allows you to do things like:

  in=Data(..)
  out=Data(..)
   for i in xrange(in.getNumberOfDataPoints())
       in_loc=in.getValueOfDataPoint(i)
       out_loc=< some operations on in_loc>
       out.setValueOfDataPoint(i,out_loc)


Also mindp  is renamed to  minGlobalDataPoint and there is a new function getValueOfGlobalDataPoint. While in MPI the functions getNumberOfDataPoints and getValueOfDataPoint are working locally on each process (so the code above is executed in parallel).
the latter allows getting a single value across all processors. 

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Revision 920 - Directory Listing
Modified Thu Jan 4 00:00:40 2007 UTC (16 years, 1 month ago) by gross

small fix on DataSource.fromDom

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Revision 918 - Directory Listing
Modified Wed Jan 3 06:30:00 2007 UTC (16 years, 1 month ago) by gross

fixes on ESySXML to get runmodel going.

    * object ids are now local for read and write of XML
    * ParameterSets are now written with class name
    * ParameterSets linked by other ParameterSets (previously only Models) are written now 
    * list are now lists of str (rather than bools), lists with bool, int or float are mapped to numarray
    * numarray are writen with generic types Bool, Int, Float (portability!)

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Revision 917 - Directory Listing
Modified Tue Jan 2 02:46:53 2007 UTC (16 years, 1 month ago) by gross

some EsysXML input files. rebuild still fails for these files

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Revision 912 - Directory Listing
Modified Wed Dec 6 03:29:49 2006 UTC (16 years, 2 months ago) by gross

modellib.WriteVTK has been rewritten. Instead of only three data objects scalar,
vector, tensor it takes now up to 20 data objects data0 ... data19 and writes it into a 
single VTK file. There is also the possibilty to define individiual name tags name0,..., name19.
If no name is given the corresponding attribute name of the Link target is used. 
This simplifies the usage and increases efficiency.

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Revision 908 - Directory Listing
Modified Thu Nov 23 06:39:39 2006 UTC (16 years, 2 months ago) by gross

some fixes

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Revision 906 - Directory Listing
Modified Tue Nov 21 05:34:15 2006 UTC (16 years, 2 months ago) by gross

some minor fixes

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Revision 893 - Directory Listing
Modified Wed Nov 8 08:20:19 2006 UTC (16 years, 3 months ago) by gross

small bug fixed

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Revision 885 - Directory Listing
Modified Wed Nov 1 09:05:51 2006 UTC (16 years, 3 months ago) by gross

DataSource for modelib added

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Revision 881 - Directory Listing
Modified Thu Oct 26 02:54:47 2006 UTC (16 years, 3 months ago) by gross

some small canges to clip function to allow unbounded upper or lower values

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Revision 880 - Directory Listing
Modified Wed Oct 25 23:58:16 2006 UTC (16 years, 3 months ago) by gross

Locator accepts list of locations now

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Revision 877 - Directory Listing
Modified Wed Oct 25 03:06:58 2006 UTC (16 years, 3 months ago) by gross

backtraking in the saddlepoint problem (not perfect yet)

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Revision 876 - Directory Listing
Modified Thu Oct 19 03:50:23 2006 UTC (16 years, 3 months ago) by ksteube

Added erf (error function) implementation

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Revision 875 - Directory Listing
Modified Tue Oct 17 12:42:47 2006 UTC (16 years, 3 months ago) by elspeth

DataSources added to modelframe/EsysXML, and tests to run_xml.py. Currently does not actually handle data 
sources, 
just references. Functionality is in progress. 

EsysXML format (URI can be a local file reference, or a remote reference such as an ftp site, fileformat 
is currently any string descriptor, such as finleyMesh or gmtdata):
 <Parameter type="DataSource">
                        <Name>
                                uritest
                        </Name>
                        <Value>
                                <DataSource>
                                        <URI>
                                                somelocalfile.txt
                                        </URI>
                                        <FileFormat>
                                                text
                                        </FileFormat>
                                </DataSource>
                        </Value>
                </Parameter>

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Revision 874 - Directory Listing
Modified Tue Oct 17 12:06:11 2006 UTC (16 years, 3 months ago) by elspeth

Changed numarray xml structure slightly, to fit better with the rest of 
the XML. 
Added lists of booleans as a data type in modelframe.
Fixed bug with bools in modelframe.

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Revision 873 - Directory Listing
Modified Mon Oct 16 04:07:33 2006 UTC (16 years, 3 months ago) by gross

uszawa scheme runs with variable viscosity

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Revision 871 - Directory Listing
Modified Sat Oct 14 08:25:54 2006 UTC (16 years, 3 months ago) by elspeth

Numarray support added to modelframe and tests for numarray added to run_xml.
Numarrays will look like this in ESysXML:

A 2 x 3 numarray will look like this:

<Parameter type="NumArray">
                        <Name>
                                numtest
                        </Name>
                        <Value>
                                <ArrayType>
                                        Float64
                                </ArrayType>
                                <Shape>
                                        2 3
                                </Shape>
                                <Data>
                                        1.0 2.0 3.0 3.0 4.0 5.0
                                </Data>
                        </Value>
                </Parameter>

A numarray vector will look like this:

<Parameter type="NumArray">
                        <Name>
                                numtest
                        </Name>
                        <Value>
                                <ArrayType>
                                        Float64
                                </ArrayType>
                                <Shape>
                                        3
                                </Shape>
                                <Data>
                                        3.0 4.0 5.0
                                </Data>
                        </Value>
                </Parameter>

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Revision 867 - Directory Listing
Modified Mon Oct 9 06:50:09 2006 UTC (16 years, 4 months ago) by gross

a class to solving sattle point problems using uszawa scheme (not functional yet)

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Revision 865 - Directory Listing
Modified Fri Oct 6 10:02:18 2006 UTC (16 years, 4 months ago) by gross

some functions for minimizing a function added. there is still some work required but successfully applied in an aplication

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Revision 838 - Directory Listing
Modified Tue Sep 5 22:45:55 2006 UTC (16 years, 5 months ago) by gross

drucker prager works now but there is still some work on the stepsize control needed.

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Revision 836 - Directory Listing
Modified Mon Sep 4 22:37:25 2006 UTC (16 years, 5 months ago) by gross

new implementation of the tangential operator and a restriction of time step size change added

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Revision 829 - Directory Listing
Modified Thu Aug 31 01:31:15 2006 UTC (16 years, 5 months ago) by gross

some changes on the drucker-prager (it does not work yet)

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Revision 813 - Directory Listing
Modified Mon Aug 21 02:08:47 2006 UTC (16 years, 5 months ago) by ksteube

Tensor products for Data objects are now computed by a C++ method
C_GeneralTensorProduct, which calls C function matrix_matrix_product
to do the actual calculation.

Can perform product with either input transposed in place, meaning
without first computing the transpose in a separate step.

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Revision 804 - Directory Listing
Modified Thu Aug 10 01:12:16 2006 UTC (16 years, 6 months ago) by gross

the new function swap_axes + tests added. (It replaces swap).

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Revision 800 - Directory Listing
Modified Tue Aug 8 11:23:18 2006 UTC (16 years, 6 months ago) by gross

new function _swap. Python wrapper + testing is still missing.

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Revision 795 - Directory Listing
Modified Mon Jul 31 01:23:58 2006 UTC (16 years, 6 months ago) by ksteube

Fixed typo in method name

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Revision 791 - Directory Listing
Modified Thu Jul 27 00:37:57 2006 UTC (16 years, 6 months ago) by bcumming

updated calls to matrixmult to the new version matrix_mult

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Revision 790 - Directory Listing
Modified Wed Jul 26 23:12:34 2006 UTC (16 years, 6 months ago) by bcumming

changes to escript/py_src/pdetools.py and /escript/src/Data.h/.cpp to
make the Locator work in MPI. escript::Data::mindp now returns a 3 tuple,
with the MPI rank of the process on which the minimum value occurs
included. escript::Data::convertToNumArrayFromDPNo also takes the ProcNo
to perform the MPI reduction.

This had to be implemented in both the MPI and non-MPI versions to allow
the necesary changes to the Python code in pdetools.py. In the non-MPI
version ProcNo is set to 0. This works for the explicit scripts tested
thus far, however if it causes problems in your scripts contact Ben or
Lutz, or revert the three files (pdetools.py, Data.h and Data.cpp) to
the previous version.  

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Revision 785 - Directory Listing
Modified Tue Jul 25 03:48:10 2006 UTC (16 years, 6 months ago) by gross

some new functions around tensor product added.

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Revision 782 - Directory Listing
Modified Tue Jul 18 00:47:47 2006 UTC (16 years, 6 months ago) by bcumming

Large number of changes to Finley for meshing in MPI.

- optimisation and neatening up of rectcanglular mesh generation code
- first and second order 1D, 2D and 3D rectangular meshes are now
  available in finley and escript using MPI.
- reduced meshes now generated in MPI, and interpolation to and from 
  reduced data types now supported.  

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Revision 775 - Directory Listing
Modified Mon Jul 10 04:00:08 2006 UTC (16 years, 7 months ago) by ksteube

Modified the following python methods in escript/py_src/util.py to
call faster C++ methods:
	escript_trace
	escript_transpose
	escript_symmetric
	escript_nonsymmetric

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Revision 772 - Directory Listing
Modified Fri Jul 7 05:47:28 2006 UTC (16 years, 7 months ago) by gross

the check for inhomogenous constraint has been modified so ot does nor
require a tolerance which is a bit risky.

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Revision 767 - Directory Listing
Modified Fri Jun 30 07:29:08 2006 UTC (16 years, 7 months ago) by gross

new FunctionSpace method setTags added

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Revision 728 - Directory Listing
Modified Mon May 15 02:01:18 2006 UTC (16 years, 9 months ago) by gross

modelframe test examples work now

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Revision 727 - Directory Listing
Modified Fri May 12 06:31:06 2006 UTC (16 years, 9 months ago) by gross

In case of an error in paso a seg fault occured. this was caused by
inproper deallocation of memory in this case. this problem is fixed now.

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Revision 720 - Directory Listing
Modified Thu Apr 27 10:16:05 2006 UTC (16 years, 9 months ago) by gross

formatting errors in epydoc tags fixed

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Revision 700 - Directory Listing
Modified Thu Apr 6 00:13:40 2006 UTC (16 years, 10 months ago) by gross

A few changes in the build mechanism and the file structure so scons can build release tar files:

  * paso/src/Solver has been moved to paso/src 
  * all test_.py are now run_.py files and are assumed to be passing python tests. they can run by 
    scons py_tests and are part of the release test set
  * escript/py_src/test_ are moved to escript/test/python and are installed in to the build directory 
    (rather then the PYTHONPATH).
  * all py files in test/python which don't start with run_ or test_ are now 'local_py_tests'. they are installed i
    by not run automatically.
  * CppUnitTest is now treated as a escript module (against previous decisions).
  * scons realse builds nor tar/zip files with relvant source code (src and tests in seperate files)

the python tests don't pass yet due to path problems.

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Revision 699 - Directory Listing
Modified Fri Mar 31 06:27:56 2006 UTC (16 years, 10 months ago) by gross

now float**Data is running

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Revision 698 - Directory Listing
Modified Fri Mar 31 04:52:55 2006 UTC (16 years, 10 months ago) by gross

test with tagged data pass now

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Revision 682 - Directory Listing
Modified Mon Mar 27 02:43:09 2006 UTC (16 years, 10 months ago) by robwdcock

+ NEW BUILD SYSTEM

This commit contains the new build system with cross-platform support.
Most things work are before though you can have more control.

ENVIRONMENT settings have changed:
+ You no longer require LD_LIBRARY_PATH or PYTHONPATH to point to the
esysroot for building and testing performed via scons
+ ACcESS altix users: It is recommended you change your modules to load
the latest intel compiler and other libraries required by boost to match
the setup in svn (you can override). The correct modules are as follows

module load intel_cc.9.0.026
export
MODULEPATH=${MODULEPATH}:/data/raid2/toolspp4/modulefiles/gcc-3.3.6
module load boost/1.33.0/python-2.4.1
module load python/2.4.1
module load numarray/1.3.3

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Revision 657 - Directory Listing
Modified Fri Mar 24 08:28:15 2006 UTC (16 years, 10 months ago) by gross

some typos fixed

---

Revision 637 - Directory Listing
Modified Thu Mar 23 10:55:31 2006 UTC (16 years, 10 months ago) by gross

more copyright statements added

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Revision 621 - Directory Listing
Modified Wed Mar 22 07:44:18 2006 UTC (16 years, 10 months ago) by gross

bugs in test fixed

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Revision 614 - Directory Listing
Modified Wed Mar 22 01:37:07 2006 UTC (16 years, 10 months ago) by elspeth

Corrected spelling of 'license' in url so that the link actually points to the license.

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Revision 612 - Directory Listing
Modified Tue Mar 21 23:54:39 2006 UTC (16 years, 10 months ago) by gross

strange problem with import numarray.linear_algebra fixed

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Revision 609 - Directory Listing
Modified Tue Mar 21 09:46:39 2006 UTC (16 years, 10 months ago) by elspeth

Updated copyright and licence notices.

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Revision 608 - Directory Listing
Modified Tue Mar 21 09:46:06 2006 UTC (16 years, 10 months ago) by elspeth

moved "import numarray.linear_algebra" to function that uses it, in case it is not installed

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Revision 596 - Directory Listing
Modified Wed Mar 15 22:41:23 2006 UTC (16 years, 10 months ago) by gross

some work on AdvectivePDE for the scalar case

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Revision 588 - Directory Listing
Modified Fri Mar 10 04:45:04 2006 UTC (16 years, 11 months ago) by gross

1D and 3D tests for eigenvalues_and_eigenvector added.

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Revision 587 - Directory Listing
Modified Fri Mar 10 02:26:50 2006 UTC (16 years, 11 months ago) by gross

eigenvalues_and_eigenvector fucntion added. test for 2D problem is added and is passed.

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Revision 585 - Directory Listing
Modified Thu Mar 9 23:47:42 2006 UTC (16 years, 11 months ago) by gross

problem with eigenvalue of zero matrix fixed (thanks Dr Hale)

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Revision 580 - Directory Listing
Modified Wed Mar 8 05:45:51 2006 UTC (16 years, 11 months ago) by gross

faster version of the local eigenvalue calculation

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Revision 574 - Directory Listing
Modified Thu Mar 2 06:31:24 2006 UTC (16 years, 11 months ago) by gross

some modifications on eigenvalues to make it a bit more robust.

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Revision 554 - Directory Listing
Modified Wed Feb 22 04:02:54 2006 UTC (16 years, 11 months ago) by gross

tests for tagged data fixed. test failing on maxval with segmenation fault (peinlich, peinlich)

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Revision 550 - Directory Listing
Modified Wed Feb 22 02:14:38 2006 UTC (16 years, 11 months ago) by gross

more tests on slicing

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Revision 536 - Directory Listing
Modified Fri Feb 17 03:20:53 2006 UTC (16 years, 11 months ago) by gross

symmetric and nonsymmetric part functions added

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Revision 531 - Directory Listing
Modified Wed Feb 15 08:11:10 2006 UTC (16 years, 11 months ago) by gross

a new version of lumping implemented (does not need a stiffness matrix)

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Revision 530 - Directory Listing
Modified Wed Feb 15 07:11:00 2006 UTC (16 years, 11 months ago) by gross

eigenvalues is working now

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Revision 529 - Directory Listing
Modified Wed Feb 15 03:58:50 2006 UTC (16 years, 11 months ago) by gross

small bugs in eigenvalues function fixed. 3x3 on data still given wrong results

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Revision 528 - Directory Listing
Modified Wed Feb 15 02:20:33 2006 UTC (16 years, 11 months ago) by gross

local eigenvalues added (not tested yet)

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Revision 525 - Directory Listing
Modified Tue Feb 14 06:56:13 2006 UTC (16 years, 11 months ago) by gross

rob's strange NoPDE class added

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Revision 517 - Directory Listing
Modified Tue Feb 14 02:25:02 2006 UTC (16 years, 11 months ago) by gross

tests for __getitem__ added

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Revision 493 - Directory Listing
Modified Fri Feb 3 02:18:45 2006 UTC (17 years ago) by gross

transpose added (just for me)

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Revision 492 - Directory Listing
Modified Fri Feb 3 02:07:24 2006 UTC (17 years ago) by gross

transpose function added

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Revision 462 - Directory Listing
Modified Wed Jan 25 00:02:03 2006 UTC (17 years ago) by gross

traceback added

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Revision 458 - Directory Listing
Modified Tue Jan 24 06:20:50 2006 UTC (17 years ago) by gross

None options are excepted now. makes life a bit easier

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Revision 451 - Directory Listing
Modified Mon Jan 23 23:45:43 2006 UTC (17 years ago) by gross

failing rin is catched now.

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Revision 443 - Directory Listing
Modified Fri Jan 20 06:22:38 2006 UTC (17 years ago) by gross

L2 function added

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Revision 442 - Directory Listing
Modified Fri Jan 20 04:39:43 2006 UTC (17 years ago) by gross

kronecker (and relatives) take now a FunctionSpace as argument and return a Data object in tthis functionspace

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Revision 441 - Directory Listing
Modified Fri Jan 20 03:40:39 2006 UTC (17 years ago) by gross

and finally test for the divergence operator added. div() has been modified to take Symbol arguments

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Revision 440 - Directory Listing
Modified Fri Jan 20 02:15:48 2006 UTC (17 years ago) by gross

tests for normals at boundary and contact region added

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Revision 439 - Directory Listing
Modified Fri Jan 20 01:46:22 2006 UTC (17 years ago) by gross

tests for interpolation added

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Revision 438 - Directory Listing
Modified Fri Jan 20 00:39:00 2006 UTC (17 years ago) by gross

test for the grad fucntion added

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Revision 437 - Directory Listing
Modified Fri Jan 20 00:16:58 2006 UTC (17 years ago) by gross

comprehensive testing for integrate function added. tests for grad will be added in the next check in. GradTest is obsolete now.

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Revision 435 - Directory Listing
Modified Thu Jan 19 03:57:30 2006 UTC (17 years ago) by gross

minor change

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Revision 434 - Directory Listing
Modified Thu Jan 19 01:53:16 2006 UTC (17 years ago) by gross

prints out the benchmark been started

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Revision 433 - Directory Listing
Modified Tue Jan 17 23:54:38 2006 UTC (17 years ago) by gross

new function inverse and tests added

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Revision 431 - Directory Listing
Modified Fri Jan 13 05:07:10 2006 UTC (17 years, 1 month ago) by gross

new implementation of ILU0

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Revision 430 - Directory Listing
Modified Wed Jan 11 06:40:50 2006 UTC (17 years, 1 month ago) by gross

ILU has been replicated is called RILU (recursive ILU) now. ILU will now be reimplemented.

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Revision 429 - Directory Listing
Modified Wed Jan 11 05:53:40 2006 UTC (17 years, 1 month ago) by gross

new implementation and testing for trace function

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Revision 425 - Directory Listing
Modified Tue Jan 10 04:10:39 2006 UTC (17 years, 1 month ago) by gross

The sparse solver can be called by paso now. 

the building has been change to reduce some code redundancy:
now all scons SCscripts are importing scons/esys_options.py which
imports platform specific settings. 

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Revision 414 - Directory Listing
Modified Wed Jan 4 05:29:05 2006 UTC (17 years, 1 month ago) by gross

bug in CPP substitute fixed.

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Revision 413 - Directory Listing
Modified Tue Jan 3 08:27:19 2006 UTC (17 years, 1 month ago) by gross

inner returns right functionspace now

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Revision 410 - Directory Listing
Modified Fri Dec 23 01:27:38 2005 UTC (17 years, 1 month ago) by gross

bug fixed

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Revision 409 - Directory Listing
Modified Fri Dec 23 01:13:41 2005 UTC (17 years, 1 month ago) by gross

bug fixed

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Revision 400 - Directory Listing
Modified Wed Dec 21 23:13:39 2005 UTC (17 years, 1 month ago) by gross

Some chnages required for oder numarray versions. mai problem is that
operations on array objects with rank 0 sometimes return float rather
than arrays. This problem seems to be fixed in newer releases.

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Revision 397 - Directory Listing
Modified Wed Dec 21 05:11:31 2005 UTC (17 years, 1 month ago) by gross

typo fixed

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Revision 396 - Directory Listing
Modified Wed Dec 21 05:08:25 2005 UTC (17 years, 1 month ago) by gross

tests for clip, maximum, minimum added

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Revision 395 - Directory Listing
Modified Wed Dec 21 02:41:59 2005 UTC (17 years, 1 month ago) by gross

test is splitted to reduce memory demand during compilation

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Revision 393 - Directory Listing
Modified Tue Dec 20 05:40:43 2005 UTC (17 years, 1 month ago) by gross

set number of threads works now

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Revision 390 - Directory Listing
Modified Tue Dec 20 03:39:24 2005 UTC (17 years, 1 month ago) by gross

os.loginname does not work under pbs. the exception is caught now

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Revision 387 - Directory Listing
Modified Tue Dec 20 00:37:20 2005 UTC (17 years, 1 month ago) by gross

scale allows now to switch on and off certain problems

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Revision 386 - Directory Listing
Modified Tue Dec 20 00:31:52 2005 UTC (17 years, 1 month ago) by gross

the number of problems to run is now the less or equal then len(scale) and less or equal number of problems. This allows easier control

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Revision 385 - Directory Listing
Modified Mon Dec 19 06:12:14 2005 UTC (17 years, 1 month ago) by gross

filerrs added

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Revision 379 - Directory Listing
Modified Mon Dec 19 01:10:34 2005 UTC (17 years, 1 month ago) by gross

a filetr added

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Revision 378 - Directory Listing
Modified Fri Dec 16 09:02:28 2005 UTC (17 years, 1 month ago) by gross

clip added

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Revision 364 - Directory Listing
Modified Thu Dec 15 04:38:28 2005 UTC (17 years, 1 month ago) by gross

a simple environment to run benchmarks (mainly for testing solvers)

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Revision 353 - Directory Listing
Modified Wed Dec 14 04:13:59 2005 UTC (17 years, 1 month ago) by gross

bug fixed (thanks to Estelle)

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Revision 352 - Directory Listing
Modified Wed Dec 14 02:21:37 2005 UTC (17 years, 2 months ago) by jgs

turns out Install() targets should also be made Default()
targets if you want them to actually reliably work!

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Revision 351 - Directory Listing
Modified Tue Dec 13 09:12:15 2005 UTC (17 years, 2 months ago) by gross

time integration manger added

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Revision 349 - Directory Listing
Modified Tue Dec 13 07:35:31 2005 UTC (17 years, 2 months ago) by gross

bug fixed

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Revision 348 - Directory Listing
Modified Tue Dec 13 07:33:10 2005 UTC (17 years, 2 months ago) by gross

advection diffusion class added

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Revision 345 - Directory Listing
Modified Tue Dec 13 05:23:45 2005 UTC (17 years, 2 months ago) by gross

advection diffusion class added

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Revision 341 - Directory Listing
Modified Mon Dec 12 05:26:10 2005 UTC (17 years, 2 months ago) by gross

some fixes to make the test to run for older numarray versions

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Revision 329 - Directory Listing
Modified Wed Dec 7 04:42:43 2005 UTC (17 years, 2 months ago) by gross

fixing the problem that older versions of numarray don't have a sign method

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Revision 328 - Directory Listing
Modified Wed Dec 7 04:41:53 2005 UTC (17 years, 2 months ago) by gross

start to remove slicing opertions

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Revision 322 - Directory Listing
Modified Tue Dec 6 04:53:30 2005 UTC (17 years, 2 months ago) by jgs

add modelframe.py to list of python modules to install

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Revision 313 - Directory Listing
Modified Mon Dec 5 07:01:36 2005 UTC (17 years, 2 months ago) by gross

and a bit more tests

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Revision 312 - Directory Listing
Modified Mon Dec 5 07:01:00 2005 UTC (17 years, 2 months ago) by gross

reimplementation of maxval,minval and length. small bug in generalTensorProduct fixed

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Revision 304 - Directory Listing
Modified Fri Dec 2 06:04:06 2005 UTC (17 years, 2 months ago) by gross

changes in util.py worked in

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Revision 293 - Directory Listing
Modified Fri Dec 2 03:46:39 2005 UTC (17 years, 2 months ago) by gross

updated

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Revision 292 - Directory Listing
Modified Fri Dec 2 03:11:04 2005 UTC (17 years, 2 months ago) by gross

complete test set for generalTensorProduct and friends added.

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Revision 291 - Directory Listing
Modified Fri Dec 2 03:10:06 2005 UTC (17 years, 2 months ago) by gross

just my private test generator

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Revision 290 - Directory Listing
Modified Fri Dec 2 03:09:32 2005 UTC (17 years, 2 months ago) by gross

some minor bugs in util.py fixed.

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Revision 288 - Directory Listing
Modified Fri Dec 2 01:55:04 2005 UTC (17 years, 2 months ago) by jgs

now automatically build unit tests as required based on dependencies
between unit tests and libraries

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Revision 287 - Directory Listing
Modified Thu Dec 1 06:40:51 2005 UTC (17 years, 2 months ago) by gross

more tests added

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Revision 283 - Directory Listing
Modified Wed Nov 30 23:35:29 2005 UTC (17 years, 2 months ago) by gross

some stuff

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Revision 282 - Directory Listing
Modified Wed Nov 30 09:18:38 2005 UTC (17 years, 2 months ago) by elspeth

Fixed XML duplication in output bug.

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Revision 269 - Directory Listing
Modified Wed Nov 30 01:59:55 2005 UTC (17 years, 2 months ago) by elspeth

Fixed typos and import problems

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Revision 268 - Directory Listing
Modified Wed Nov 30 01:39:47 2005 UTC (17 years, 2 months ago) by jgs

setup scons configuration to make and install python code

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Revision 266 - Directory Listing
Modified Wed Nov 30 00:21:51 2005 UTC (17 years, 2 months ago) by elspeth

Added handling for NoneType

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Revision 265 - Directory Listing
Modified Tue Nov 29 22:56:08 2005 UTC (17 years, 2 months ago) by elspeth

Minor bugfix - should now actually run simulations

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Revision 260 - Directory Listing
Modified Tue Nov 29 07:34:06 2005 UTC (17 years, 2 months ago) by gross

small fix

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Revision 250 - Directory Listing
Modified Tue Nov 29 05:32:57 2005 UTC (17 years, 2 months ago) by gross

initial checkin

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Revision 157 - Directory Listing
Modified Wed Nov 9 10:01:06 2005 UTC (17 years, 3 months ago) by gross

initial checkin

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Revision 155 - Directory Listing
Modified Wed Nov 9 02:02:19 2005 UTC (17 years, 3 months ago) by jgs

move all directories from trunk/esys2 into trunk and remove esys2

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Revision 154 - Directory Listing
Modified Mon Nov 7 05:51:17 2005 UTC (17 years, 3 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-11-07

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Revision 153 - Directory Listing
Modified Tue Oct 25 01:51:20 2005 UTC (17 years, 3 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-10-25

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Revision 151 - Directory Listing
Modified Thu Sep 22 01:55:00 2005 UTC (17 years, 4 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-09-22

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Revision 150 - Directory Listing
Modified Thu Sep 15 03:44:45 2005 UTC (17 years, 4 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-09-15

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Revision 149 - Directory Listing
Modified Thu Sep 1 03:31:39 2005 UTC (17 years, 5 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-09-01

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Revision 148 - Directory Listing
Modified Tue Aug 23 01:24:31 2005 UTC (17 years, 5 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch dev-02 back to main trunk on 2005-08-23

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Revision 147 - Directory Listing
Modified Fri Aug 12 01:45:47 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

erge of development branch dev-02 back to main trunk on 2005-08-12

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Revision 146 - Directory Listing
Modified Fri Jul 29 01:44:29 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

First merge of development branch dev-02 back to main trunk on 2005-07-29

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Revision 143 - Directory Listing
Modified Mon Jul 25 05:39:50 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

moved these files to modellib directory

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Revision 142 - Directory Listing
Modified Mon Jul 25 05:28:20 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-07-25

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Revision 141 - Directory Listing
Modified Mon Jul 25 05:15:41 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

fixed to work with new python source/install directory structure

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Revision 128 - Directory Listing
Modified Fri Jul 22 05:13:08 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

removed modellib code from escript source directory

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Revision 126 - Directory Listing
Modified Fri Jul 22 03:53:08 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-07-22

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Revision 124 - Directory Listing
Modified Wed Jul 20 06:14:58 2005 UTC (17 years, 6 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

added ln(data) style wrapper for data.ln() - also added corresponding
implementation of Ln_Symbol class (not sure if this is right though)

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Revision 123 - Directory Listing
Modified Fri Jul 8 04:08:13 2005 UTC (17 years, 7 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-07-08

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Revision 122 - Directory Listing
Modified Thu Jun 9 05:38:05 2005 UTC (17 years, 8 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-06-09

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Revision 121 - Directory Listing
Modified Fri May 6 04:26:16 2005 UTC (17 years, 9 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-05-06

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Revision 119 - Directory Listing
Modified Tue Apr 12 04:45:05 2005 UTC (17 years, 10 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

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Revision 117 - Directory Listing
Modified Fri Apr 1 05:48:57 2005 UTC (17 years, 10 months ago) by jgs
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Revision 114 - Directory Listing
Modified Fri Mar 4 07:12:37 2005 UTC (17 years, 11 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Merge of development branch back to main trunk on 2005-03-04

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Revision 113 - Directory Listing
Modified Mon Feb 28 07:06:33 2005 UTC (17 years, 11 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

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Modified Mon Feb 14 04:14:42 2005 UTC (17 years, 11 months ago) by jgs
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Revision 108 - Directory Listing
Modified Thu Jan 27 06:21:59 2005 UTC (18 years ago) by jgs
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Revision 105 - Directory Listing
Modified Thu Dec 23 07:20:07 2004 UTC (18 years, 1 month ago) by jgs
Original Path: trunk/esys2/escript/py_src

commit of dev-01 branch back to main trunk on 2004-12-23

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Revision 104 - Directory Listing
Modified Fri Dec 17 07:43:12 2004 UTC (18 years, 1 month ago) by jgs
Original Path: trunk/esys2/escript/py_src

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Modified Wed Dec 15 07:08:39 2004 UTC (18 years, 1 month ago) by jgs
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Modified Wed Dec 15 03:48:48 2004 UTC (18 years, 1 month ago) by jgs
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Modified Tue Dec 14 05:39:33 2004 UTC (18 years, 1 month ago) by jgs
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Revision 88 - Directory Listing
Modified Wed Oct 27 00:23:36 2004 UTC (18 years, 3 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

fixed minor syntax error

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Revision 82 - Directory Listing
Added Tue Oct 26 06:53:54 2004 UTC (18 years, 3 months ago) by jgs
Original Path: trunk/esys2/escript/py_src

Initial revision