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better method to du clipping
1 | |
2 | ######################################################## |
3 | # |
4 | # Copyright (c) 2003-2008 by University of Queensland |
5 | # Earth Systems Science Computational Center (ESSCC) |
6 | # http://www.uq.edu.au/esscc |
7 | # |
8 | # Primary Business: Queensland, Australia |
9 | # Licensed under the Open Software License version 3.0 |
10 | # http://www.opensource.org/licenses/osl-3.0.php |
11 | # |
12 | ######################################################## |
13 | |
14 | __copyright__="""Copyright (c) 2003-2008 by University of Queensland |
15 | Earth Systems Science Computational Center (ESSCC) |
16 | http://www.uq.edu.au/esscc |
17 | Primary Business: Queensland, Australia""" |
18 | __license__="""Licensed under the Open Software License version 3.0 |
19 | http://www.opensource.org/licenses/osl-3.0.php""" |
20 | __url__="http://www.uq.edu.au/esscc/escript-finley" |
21 | |
22 | """ |
23 | Utility functions for escript |
24 | |
25 | @var __author__: name of author |
26 | @var __copyright__: copyrights |
27 | @var __license__: licence agreement |
28 | @var __url__: url entry point on documentation |
29 | @var __version__: version |
30 | @var __date__: date of the version |
31 | @var EPSILON: smallest positive value with 1.<1.+EPSILON |
32 | @var DBLE_MAX: largest positive float |
33 | """ |
34 | |
35 | __author__="Lutz Gross, l.gross@uq.edu.au" |
36 | |
37 | |
38 | import math |
39 | import numarray |
40 | import escript |
41 | import os |
42 | from esys.escript import C_GeneralTensorProduct |
43 | from esys.escript import getVersion |
44 | from esys.escript import printParallelThreadCounts |
45 | from esys.escript import listEscriptParams |
46 | |
47 | #========================================================= |
48 | # some helpers: |
49 | #========================================================= |
50 | def getEpsilon(): |
51 | return escript.getMachinePrecision() |
52 | EPSILON=getEpsilon() |
53 | |
54 | def getMaxFloat(): |
55 | return escript.getMaxFloat() |
56 | DBLE_MAX=getMaxFloat() |
57 | |
58 | |
59 | def getTagNames(domain): |
60 | """ |
61 | Returns a list of tag names used by the domain. |
62 | |
63 | @param domain: a domain object |
64 | @type domain: L{escript.Domain} |
65 | @return: a list of tag names used by the domain |
66 | @rtype: C{list} of C{str} |
67 | """ |
68 | return [n.strip() for n in domain.showTagNames().split(",") ] |
69 | |
70 | def insertTagNames(domain,**kwargs): |
71 | """ |
72 | Inserts tag names into the domain. |
73 | |
74 | @param domain: a domain object |
75 | @type domain: C{escript.Domain} |
76 | @keyword <tag_name>: tag key assigned to <tag_name> |
77 | @type <tag_name>: C{int} |
78 | """ |
79 | for k in kwargs: |
80 | domain.setTagMap(k,kwargs[k]) |
81 | |
82 | def insertTaggedValues(target,**kwargs): |
83 | """ |
84 | Inserts tagged values into the target using tag names. |
85 | |
86 | @param target: data to be filled by tagged values |
87 | @type target: L{escript.Data} |
88 | @keyword <tag_name>: value to be used for <tag_name> |
89 | @type <tag_name>: C{float} or C{numarray.NumArray} |
90 | @return: C{target} |
91 | @rtype: L{escript.Data} |
92 | """ |
93 | for k in kwargs: |
94 | target.setTaggedValue(k,kwargs[k]) |
95 | return target |
96 | |
97 | def saveVTK(filename,domain=None,**data): |
98 | """ |
99 | Writes L{Data} objects and their mesh into a file using the VTK XML file |
100 | format. |
101 | |
102 | Example:: |
103 | |
104 | tmp=Scalar(..) |
105 | v=Vector(..) |
106 | saveVTK("solution.vtu", temperature=tmp, velocity=v) |
107 | |
108 | C{tmp} and C{v} are written into "solution.vtu" where C{tmp} is named |
109 | "temperature" and C{v} is named "velocity". |
110 | |
111 | @param filename: file name of the output file |
112 | @type filename: C{str} |
113 | @param domain: domain of the L{Data} objects. If not specified, the domain |
114 | of the given L{Data} objects is used. |
115 | @type domain: L{escript.Domain} |
116 | @keyword <name>: writes the assigned value to the VTK file using <name> as |
117 | identifier |
118 | @type <name>: L{Data} object |
119 | @note: The data objects have to be defined on the same domain. They may not |
120 | be in the same L{FunctionSpace} but one cannot expect that all |
121 | L{FunctionSpace}s can be mixed. Typically, data on the boundary and |
122 | data on the interior cannot be mixed. |
123 | """ |
124 | new_data={} |
125 | for n,d in data.items(): |
126 | if not d.isEmpty(): |
127 | fs=d.getFunctionSpace() |
128 | domain2=fs.getDomain() |
129 | if fs == escript.Solution(domain2): |
130 | new_data[n]=interpolate(d,escript.ContinuousFunction(domain2)) |
131 | elif fs == escript.ReducedSolution(domain2): |
132 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
133 | else: |
134 | new_data[n]=d |
135 | if domain==None: domain=domain2 |
136 | if domain==None: |
137 | raise ValueError,"saveVTK: no domain detected." |
138 | domain.saveVTK(filename,new_data) |
139 | |
140 | def saveDX(filename,domain=None,**data): |
141 | """ |
142 | Writes L{Data} objects into a file using the OpenDX file format. |
143 | |
144 | Example:: |
145 | |
146 | tmp=Scalar(..) |
147 | v=Vector(..) |
148 | saveDX("solution.dx", temperature=tmp, velocity=v) |
149 | |
150 | C{tmp} and C{v} are written into "solution.dx" where C{tmp} is named |
151 | "temperature" and C{v} is named "velocity". |
152 | |
153 | @param filename: file name of the output file |
154 | @type filename: C{str} |
155 | @param domain: domain of the L{Data} objects. If not specified, the domain |
156 | of the given L{Data} objects is used. |
157 | @type domain: L{escript.Domain} |
158 | @keyword <name>: writes the assigned value to the DX file using <name> as |
159 | identifier. The identifier can be used to select the data |
160 | set when data are imported into DX. |
161 | @type <name>: L{Data} object |
162 | @note: The data objects have to be defined on the same domain. They may not |
163 | be in the same L{FunctionSpace} but one cannot expect that all |
164 | L{FunctionSpace}s can be mixed. Typically, data on the boundary and |
165 | data on the interior cannot be mixed. |
166 | """ |
167 | new_data={} |
168 | for n,d in data.items(): |
169 | if not d.isEmpty(): |
170 | fs=d.getFunctionSpace() |
171 | domain2=fs.getDomain() |
172 | if fs == escript.Solution(domain2): |
173 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
174 | elif fs == escript.ReducedSolution(domain2): |
175 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
176 | elif fs == escript.ContinuousFunction(domain2): |
177 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
178 | else: |
179 | new_data[n]=d |
180 | if domain==None: domain=domain2 |
181 | if domain==None: |
182 | raise ValueError,"saveDX: no domain detected." |
183 | domain.saveDX(filename,new_data) |
184 | |
185 | def saveESD(datasetName, dataDir=".", domain=None, **data): |
186 | """ |
187 | Saves L{Data} objects to files and creates an I{escript dataset} (ESD) file |
188 | for convenient processing/visualisation. |
189 | |
190 | Example:: |
191 | |
192 | tmp = Scalar(..) |
193 | v = Vector(..) |
194 | saveESD("solution", "data", temperature=tmp, velocity=v) |
195 | |
196 | tmp, v and the domain are saved in native format in the "data" |
197 | directory and the file "solution.esd" is created that refers to tmp by |
198 | the name "temperature" and to v by the name "velocity". |
199 | |
200 | @param datasetName: name of the dataset, used to name the ESD file |
201 | @type datasetName: C{str} |
202 | @param dataDir: optional directory where the data files should be saved |
203 | @type dataDir: C{str} |
204 | @param domain: domain of the L{Data} object(s). If not specified, the |
205 | domain of the given L{Data} objects is used. |
206 | @type domain: L{escript.Domain} |
207 | @keyword <name>: writes the assigned value to the file using <name> as |
208 | identifier |
209 | @type <name>: L{Data} object. |
210 | @note: The data objects have to be defined on the same domain. They may not |
211 | be in the same L{FunctionSpace} but one cannot expect that all |
212 | L{FunctionSpace}s can be mixed. Typically, data on the boundary and |
213 | data on the interior cannot be mixed. |
214 | """ |
215 | new_data = {} |
216 | for n,d in data.items(): |
217 | if not d.isEmpty(): |
218 | fs = d.getFunctionSpace() |
219 | domain2 = fs.getDomain() |
220 | if fs == escript.Solution(domain2): |
221 | new_data[n]=interpolate(d,escript.ContinuousFunction(domain2)) |
222 | elif fs == escript.ReducedSolution(domain2): |
223 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
224 | else: |
225 | new_data[n]=d |
226 | if domain==None: domain=domain2 |
227 | if domain==None: |
228 | raise ValueError, "saveESD: no domain detected." |
229 | |
230 | if domain.onMasterProcessor() and not os.path.isdir(dataDir): |
231 | os.mkdir(dataDir) |
232 | |
233 | meshFile = os.path.join(dataDir, datasetName+"_mesh") |
234 | domain.dump(meshFile + ".nc") |
235 | outputString = "" |
236 | if domain.onMasterProcessor(): |
237 | outputString += "#escript datafile V1.0\n" |
238 | # number of timesteps (currently only 1 is supported) |
239 | outputString += "T=1\n" |
240 | # name of the mesh file |
241 | outputString += "M=%s\n" % meshFile |
242 | # number of blocks (MPI size) |
243 | outputString += "N=%d\n" % domain.getMPISize() |
244 | |
245 | # now add the variables |
246 | for varName, d in new_data.items(): |
247 | varFile = os.path.join(dataDir, datasetName+"_"+varName) |
248 | d.dump(varFile + ".nc") |
249 | if domain.onMasterProcessor(): |
250 | outputString += "V=%s:%s\n" % (varFile, varName) |
251 | |
252 | if domain.onMasterProcessor(): |
253 | esdfile = open(datasetName+".esd", "w") |
254 | esdfile.write(outputString) |
255 | esdfile.close() |
256 | |
257 | def kronecker(d=3): |
258 | """ |
259 | Returns the kronecker S{delta}-symbol. |
260 | |
261 | @param d: dimension or an object that has the C{getDim} method defining the |
262 | dimension |
263 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
264 | @return: the object u of rank 2 with M{u[i,j]=1} for M{i=j} and M{u[i,j]=0} |
265 | otherwise |
266 | @rtype: C{numarray.NumArray} or L{escript.Data} of rank 2 |
267 | """ |
268 | return identityTensor(d) |
269 | |
270 | def identity(shape=()): |
271 | """ |
272 | Returns the C{shape} x C{shape} identity tensor. |
273 | |
274 | @param shape: input shape for the identity tensor |
275 | @type shape: C{tuple} of C{int} |
276 | @return: array whose shape is shape x shape where M{u[i,k]=1} for M{i=k} and |
277 | M{u[i,k]=0} otherwise for len(shape)=1. If len(shape)=2: |
278 | M{u[i,j,k,l]=1} for M{i=k and j=l} and M{u[i,j,k,l]=0} otherwise. |
279 | @rtype: C{numarray.NumArray} of rank 1, rank 2 or rank 4 |
280 | @raise ValueError: if len(shape)>2 |
281 | """ |
282 | if len(shape)>0: |
283 | out=numarray.zeros(shape+shape,numarray.Float64) |
284 | if len(shape)==1: |
285 | for i0 in range(shape[0]): |
286 | out[i0,i0]=1. |
287 | elif len(shape)==2: |
288 | for i0 in range(shape[0]): |
289 | for i1 in range(shape[1]): |
290 | out[i0,i1,i0,i1]=1. |
291 | else: |
292 | raise ValueError,"identity: length of shape is restricted to 2." |
293 | else: |
294 | out=1. |
295 | return out |
296 | |
297 | def identityTensor(d=3): |
298 | """ |
299 | Returns the C{d} x C{d} identity matrix. |
300 | |
301 | @param d: dimension or an object that has the C{getDim} method defining the |
302 | dimension |
303 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
304 | @return: the object u of rank 2 with M{u[i,j]=1} for M{i=j} and M{u[i,j]=0} |
305 | otherwise |
306 | @rtype: C{numarray.NumArray} or L{escript.Data} of rank 2 |
307 | """ |
308 | if isinstance(d,escript.FunctionSpace): |
309 | return escript.Data(identity((d.getDim(),)),d) |
310 | elif isinstance(d,escript.Domain): |
311 | return identity((d.getDim(),)) |
312 | else: |
313 | return identity((d,)) |
314 | |
315 | def identityTensor4(d=3): |
316 | """ |
317 | Returns the C{d} x C{d} x C{d} x C{d} identity tensor. |
318 | |
319 | @param d: dimension or an object that has the C{getDim} method defining the |
320 | dimension |
321 | @type d: C{int} or any object with a C{getDim} method |
322 | @return: the object u of rank 4 with M{u[i,j,k,l]=1} for M{i=k and j=l} and |
323 | M{u[i,j,k,l]=0} otherwise |
324 | @rtype: C{numarray.NumArray} or L{escript.Data} of rank 4 |
325 | """ |
326 | if isinstance(d,escript.FunctionSpace): |
327 | return escript.Data(identity((d.getDim(),d.getDim())),d) |
328 | elif isinstance(d,escript.Domain): |
329 | return identity((d.getDim(),d.getDim())) |
330 | else: |
331 | return identity((d,d)) |
332 | |
333 | def unitVector(i=0,d=3): |
334 | """ |
335 | Returns a unit vector u of dimension d whose non-zero element is at index i. |
336 | |
337 | @param i: index for non-zero element |
338 | @type i: C{int} |
339 | @param d: dimension or an object that has the C{getDim} method defining the |
340 | dimension |
341 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
342 | @return: the object u of rank 1 with M{u[j]=1} for M{j=index} and M{u[j]=0} |
343 | otherwise |
344 | @rtype: C{numarray.NumArray} or L{escript.Data} of rank 1 |
345 | """ |
346 | return kronecker(d)[i] |
347 | |
348 | #========================================================================= |
349 | # global reduction operations (these functions have no symbolic version) |
350 | #========================================================================= |
351 | def Lsup(arg): |
352 | """ |
353 | Returns the Lsup-norm of argument C{arg}. This is the maximum absolute value |
354 | over all data points. This function is equivalent to C{sup(abs(arg))}. |
355 | |
356 | @param arg: argument |
357 | @type arg: C{float}, C{int}, L{escript.Data}, C{numarray.NumArray} |
358 | @return: maximum value of the absolute value of C{arg}over all components |
359 | and all data points |
360 | @rtype: C{float} |
361 | @raise TypeError: if type of C{arg}cannot be processed |
362 | """ |
363 | if isinstance(arg,numarray.NumArray): |
364 | return sup(abs(arg)) |
365 | elif isinstance(arg,escript.Data): |
366 | return arg._Lsup() |
367 | elif isinstance(arg,float): |
368 | return abs(arg) |
369 | elif isinstance(arg,int): |
370 | return abs(float(arg)) |
371 | else: |
372 | raise TypeError,"Lsup: Unknown argument type." |
373 | |
374 | def sup(arg): |
375 | """ |
376 | Returns the maximum value over all data points. |
377 | |
378 | @param arg: argument |
379 | @type arg: C{float}, C{int}, L{escript.Data}, C{numarray.NumArray} |
380 | @return: maximum value of C{arg}over all components and all data points |
381 | @rtype: C{float} |
382 | @raise TypeError: if type of C{arg}cannot be processed |
383 | """ |
384 | if isinstance(arg,numarray.NumArray): |
385 | return arg.max() |
386 | elif isinstance(arg,escript.Data): |
387 | return arg._sup() |
388 | elif isinstance(arg,float): |
389 | return arg |
390 | elif isinstance(arg,int): |
391 | return float(arg) |
392 | else: |
393 | raise TypeError,"sup: Unknown argument type." |
394 | |
395 | def inf(arg): |
396 | """ |
397 | Returns the minimum value over all data points. |
398 | |
399 | @param arg: argument |
400 | @type arg: C{float}, C{int}, L{escript.Data}, C{numarray.NumArray} |
401 | @return: minimum value of C{arg}over all components and all data points |
402 | @rtype: C{float} |
403 | @raise TypeError: if type of C{arg}cannot be processed |
404 | """ |
405 | if isinstance(arg,numarray.NumArray): |
406 | return arg.min() |
407 | elif isinstance(arg,escript.Data): |
408 | return arg._inf() |
409 | elif isinstance(arg,float): |
410 | return arg |
411 | elif isinstance(arg,int): |
412 | return float(arg) |
413 | else: |
414 | raise TypeError,"inf: Unknown argument type." |
415 | |
416 | |
417 | #========================================================================= |
418 | # some little helpers |
419 | #========================================================================= |
420 | def getRank(arg): |
421 | """ |
422 | Identifies the rank of the argument. |
423 | |
424 | @param arg: an object whose rank is to be returned |
425 | @type arg: C{numarray.NumArray}, L{escript.Data}, C{float}, C{int}, |
426 | C{Symbol} |
427 | @return: the rank of the argument |
428 | @rtype: C{int} |
429 | @raise TypeError: if type of C{arg}cannot be processed |
430 | """ |
431 | |
432 | if isinstance(arg,numarray.NumArray): |
433 | return arg.rank |
434 | elif isinstance(arg,escript.Data): |
435 | return arg.getRank() |
436 | elif isinstance(arg,float): |
437 | return 0 |
438 | elif isinstance(arg,int): |
439 | return 0 |
440 | elif isinstance(arg,Symbol): |
441 | return arg.getRank() |
442 | else: |
443 | raise TypeError,"getRank: Unknown argument type." |
444 | |
445 | def getShape(arg): |
446 | """ |
447 | Identifies the shape of the argument. |
448 | |
449 | @param arg: an object whose shape is to be returned |
450 | @type arg: C{numarray.NumArray}, L{escript.Data}, C{float}, C{int}, |
451 | C{Symbol} |
452 | @return: the shape of the argument |
453 | @rtype: C{tuple} of C{int} |
454 | @raise TypeError: if type of C{arg}cannot be processed |
455 | """ |
456 | |
457 | if isinstance(arg,numarray.NumArray): |
458 | return arg.shape |
459 | elif isinstance(arg,escript.Data): |
460 | return arg.getShape() |
461 | elif isinstance(arg,float): |
462 | return () |
463 | elif isinstance(arg,int): |
464 | return () |
465 | elif isinstance(arg,Symbol): |
466 | return arg.getShape() |
467 | else: |
468 | raise TypeError,"getShape: Cannot identify shape" |
469 | |
470 | def pokeDim(arg): |
471 | """ |
472 | Identifies the spatial dimension of the argument. |
473 | |
474 | @param arg: an object whose spatial dimension is to be returned |
475 | @type arg: any |
476 | @return: the spatial dimension of the argument, if available, or C{None} |
477 | @rtype: C{int} or C{None} |
478 | """ |
479 | |
480 | if isinstance(arg,escript.Data): |
481 | return arg.getFunctionSpace().getDim() |
482 | elif isinstance(arg,Symbol): |
483 | return arg.getDim() |
484 | else: |
485 | return None |
486 | |
487 | def commonShape(arg0, arg1): |
488 | """ |
489 | Returns a shape to which C{arg0} can be extended from the right and C{arg1} |
490 | can be extended from the left. |
491 | |
492 | @param arg0: an object with a shape (see L{getShape}) |
493 | @param arg1: an object with a shape (see L{getShape}) |
494 | @return: the shape of C{arg0} or C{arg1} such that the left part equals the |
495 | shape of C{arg0} and the right end equals the shape of C{arg1} |
496 | @rtype: C{tuple} of C{int} |
497 | @raise ValueError: if no shape can be found |
498 | """ |
499 | sh0=getShape(arg0) |
500 | sh1=getShape(arg1) |
501 | if len(sh0)<len(sh1): |
502 | if not sh0==sh1[:len(sh0)]: |
503 | raise ValueError,"argument 0 cannot be extended to the shape of argument 1" |
504 | return sh1 |
505 | elif len(sh0)>len(sh1): |
506 | if not sh1==sh0[:len(sh1)]: |
507 | raise ValueError,"argument 1 cannot be extended to the shape of argument 0" |
508 | return sh0 |
509 | else: |
510 | if not sh0==sh1: |
511 | raise ValueError,"argument 1 and argument 0 have not the same shape." |
512 | return sh0 |
513 | |
514 | def commonDim(*args): |
515 | """ |
516 | Identifies, if possible, the spatial dimension across a set of objects |
517 | which may or may not have a spatial dimension. |
518 | |
519 | @param args: given objects |
520 | @return: the spatial dimension of the objects with identifiable dimension |
521 | (see L{pokeDim}). If none of the objects has a spatial dimension |
522 | C{None} is returned. |
523 | @rtype: C{int} or C{None} |
524 | @raise ValueError: if the objects with identifiable dimension don't have |
525 | the same spatial dimension. |
526 | """ |
527 | out=None |
528 | for a in args: |
529 | d=pokeDim(a) |
530 | if not out==None: |
531 | if not (d==None or out==d): |
532 | raise ValueError,"dimension of arguments don't match" |
533 | else: |
534 | out=d |
535 | return out |
536 | |
537 | def testForZero(arg): |
538 | """ |
539 | Tests if the argument is identical to zero. |
540 | |
541 | @param arg: the object to test for zero |
542 | @type arg: typically C{numarray.NumArray}, L{escript.Data}, C{float}, C{int} |
543 | @return: True if the argument is identical to zero, False otherwise |
544 | @rtype: C{bool} |
545 | """ |
546 | if isinstance(arg,numarray.NumArray): |
547 | return not Lsup(arg)>0. |
548 | elif isinstance(arg,escript.Data): |
549 | return False |
550 | elif isinstance(arg,float): |
551 | return not Lsup(arg)>0. |
552 | elif isinstance(arg,int): |
553 | return not Lsup(arg)>0. |
554 | elif isinstance(arg,Symbol): |
555 | return False |
556 | else: |
557 | return False |
558 | |
559 | def matchType(arg0=0.,arg1=0.): |
560 | """ |
561 | Converts C{arg0} and C{arg1} both to the same type C{numarray.NumArray} or |
562 | L{escript.Data} or, if one of C{arg0} or C{arg1} is of type L{Symbol}, the |
563 | other one to be of type C{numarray.NumArray} or L{escript.Data}. |
564 | |
565 | @param arg0: first argument |
566 | @type arg0: C{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
567 | @param arg1: second argument |
568 | @type arg1: C{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
569 | @return: a tuple representing C{arg0} and C{arg1} with the same type or |
570 | with one of them being a L{Symbol} |
571 | @rtype: C{tuple} of two C{numarray.NumArray}, two L{escript.Data}, |
572 | a C{Symbol} and one of the types C{numarray.NumArray} or |
573 | L{escript.Data} |
574 | @raise TypeError: if type of C{arg0} or C{arg1} cannot be processed |
575 | """ |
576 | if isinstance(arg0,numarray.NumArray): |
577 | if isinstance(arg1,numarray.NumArray): |
578 | pass |
579 | elif isinstance(arg1,escript.Data): |
580 | arg0=escript.Data(arg0,arg1.getFunctionSpace()) |
581 | elif isinstance(arg1,float): |
582 | arg1=numarray.array(arg1,type=numarray.Float64) |
583 | elif isinstance(arg1,int): |
584 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
585 | elif isinstance(arg1,Symbol): |
586 | pass |
587 | else: |
588 | raise TypeError,"function: Unknown type of second argument." |
589 | elif isinstance(arg0,escript.Data): |
590 | if isinstance(arg1,numarray.NumArray): |
591 | arg1=escript.Data(arg1,arg0.getFunctionSpace()) |
592 | elif isinstance(arg1,escript.Data): |
593 | pass |
594 | elif isinstance(arg1,float): |
595 | arg1=escript.Data(arg1,(),arg0.getFunctionSpace()) |
596 | elif isinstance(arg1,int): |
597 | arg1=escript.Data(float(arg1),(),arg0.getFunctionSpace()) |
598 | elif isinstance(arg1,Symbol): |
599 | pass |
600 | else: |
601 | raise TypeError,"function: Unknown type of second argument." |
602 | elif isinstance(arg0,Symbol): |
603 | if isinstance(arg1,numarray.NumArray): |
604 | pass |
605 | elif isinstance(arg1,escript.Data): |
606 | pass |
607 | elif isinstance(arg1,float): |
608 | arg1=numarray.array(arg1,type=numarray.Float64) |
609 | elif isinstance(arg1,int): |
610 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
611 | elif isinstance(arg1,Symbol): |
612 | pass |
613 | else: |
614 | raise TypeError,"function: Unknown type of second argument." |
615 | elif isinstance(arg0,float): |
616 | if isinstance(arg1,numarray.NumArray): |
617 | arg0=numarray.array(arg0,type=numarray.Float64) |
618 | elif isinstance(arg1,escript.Data): |
619 | arg0=escript.Data(arg0,arg1.getFunctionSpace()) |
620 | elif isinstance(arg1,float): |
621 | arg0=numarray.array(arg0,type=numarray.Float64) |
622 | arg1=numarray.array(arg1,type=numarray.Float64) |
623 | elif isinstance(arg1,int): |
624 | arg0=numarray.array(arg0,type=numarray.Float64) |
625 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
626 | elif isinstance(arg1,Symbol): |
627 | arg0=numarray.array(arg0,type=numarray.Float64) |
628 | else: |
629 | raise TypeError,"function: Unknown type of second argument." |
630 | elif isinstance(arg0,int): |
631 | if isinstance(arg1,numarray.NumArray): |
632 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
633 | elif isinstance(arg1,escript.Data): |
634 | arg0=escript.Data(float(arg0),arg1.getFunctionSpace()) |
635 | elif isinstance(arg1,float): |
636 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
637 | arg1=numarray.array(arg1,type=numarray.Float64) |
638 | elif isinstance(arg1,int): |
639 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
640 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
641 | elif isinstance(arg1,Symbol): |
642 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
643 | else: |
644 | raise TypeError,"function: Unknown type of second argument." |
645 | else: |
646 | raise TypeError,"function: Unknown type of first argument." |
647 | |
648 | return arg0,arg1 |
649 | |
650 | def matchShape(arg0,arg1): |
651 | """ |
652 | Returns a representation of C{arg0} and C{arg1} which have the same shape. |
653 | |
654 | @param arg0: first argument |
655 | @type arg0: C{numarray.NumArray},L{escript.Data},C{float}, C{int}, L{Symbol} |
656 | @param arg1: second argument |
657 | @type arg1: C{numarray.NumArray},L{escript.Data},C{float}, C{int}, L{Symbol} |
658 | @return: C{arg0} and C{arg1} where copies are returned when the shape has |
659 | to be changed |
660 | @rtype: C{tuple} |
661 | """ |
662 | sh=commonShape(arg0,arg1) |
663 | sh0=getShape(arg0) |
664 | sh1=getShape(arg1) |
665 | if len(sh0)<len(sh): |
666 | return outer(arg0,numarray.ones(sh[len(sh0):],numarray.Float64)),arg1 |
667 | elif len(sh1)<len(sh): |
668 | return arg0,outer(arg1,numarray.ones(sh[len(sh1):],numarray.Float64)) |
669 | else: |
670 | return arg0,arg1 |
671 | |
672 | #========================================================= |
673 | # symbolic tool box starts here: |
674 | #========================================================= |
675 | class Symbol(object): |
676 | """ |
677 | Symbol class objects provide the same functionality as C{numarray.NumArray} |
678 | and L{escript.Data} objects but they do not have a value and therefore |
679 | cannot be plotted or visualized. The main purpose is the possibility to |
680 | calculate derivatives with respect to other Symbols used to define a Symbol. |
681 | |
682 | """ |
683 | def __init__(self,shape=(),args=[],dim=None): |
684 | """ |
685 | Creates an instance of a symbol of a given shape. The symbol may depend |
686 | on a list of arguments C{args} which may be symbols or any other object. |
687 | |
688 | @param args: the arguments of the symbol |
689 | @type args: C{list} |
690 | @param shape: the shape of the symbol |
691 | @type shape: C{tuple} of C{int} |
692 | @param dim: spatial dimension of the symbol. If dim=C{None} the spatial |
693 | dimension is undefined. |
694 | @type dim: C{None} or C{int} |
695 | |
696 | """ |
697 | if len(shape)>4: |
698 | raise ValueError,"Symbol only supports tensors up to order 4" |
699 | self.__args=args |
700 | self.__shape=shape |
701 | self.__dim=dim |
702 | |
703 | def getArgument(self,i=None): |
704 | """ |
705 | Returns the i-th argument of the symbol. |
706 | |
707 | @param i: index of the argument requested |
708 | @type i: C{int} or C{None} |
709 | @raise IndexError: if the requested index does not exist |
710 | @return: the value of the i-th argument or if i is not specified the |
711 | list of all arguments |
712 | @rtype: a single object or a list of objects |
713 | """ |
714 | if i==None: |
715 | return self.__args |
716 | else: |
717 | if i<0 or i>=len(self.__args): |
718 | raise IndexError,"there are only %s arguments"%len(self.__args) |
719 | return self.__args[i] |
720 | |
721 | def getRank(self): |
722 | """ |
723 | Returns the rank of the symbol. |
724 | |
725 | @return: the rank of the symbol. This is length of the shape. |
726 | @rtype: C{int} |
727 | """ |
728 | return len(self.getShape()) |
729 | |
730 | def getShape(self): |
731 | """ |
732 | Returns the shape of the symbol. |
733 | |
734 | @return: the shape of the symbol |
735 | @rtype: C{tuple} of C{int} |
736 | """ |
737 | return self.__shape |
738 | |
739 | def getDim(self): |
740 | """ |
741 | Returns the spatial dimension. |
742 | |
743 | @return: the symbol's spatial dimension |
744 | @rtype: C{int} if the dimension is defined, C{None} otherwise |
745 | """ |
746 | return self.__dim |
747 | |
748 | def __str__(self): |
749 | """ |
750 | Returns a string representation of the symbol. |
751 | |
752 | @return: a string representation of the object |
753 | @rtype: C{str} |
754 | """ |
755 | args=[] |
756 | for arg in self.getArgument(): |
757 | args.append(str(arg)) |
758 | try: |
759 | out=self.getMyCode(args,format="str") |
760 | except NotImplementedError: |
761 | out="<Symbol %s>"%id(self) |
762 | return out |
763 | |
764 | def getSubstitutedArguments(self,argvals): |
765 | """ |
766 | Substitutes symbols in the arguments of this object and returns the |
767 | result as a list. |
768 | |
769 | @param argvals: L{Symbol} and their substitutes. The L{Symbol} u in the |
770 | expression defining this object is replaced by |
771 | argvals[u]. |
772 | @type argvals: C{dict} with keywords of type L{Symbol} |
773 | @rtype: C{list} of objects |
774 | @return: list of the object assigned to the arguments through |
775 | substitution or for the arguments which are not L{Symbol}s the |
776 | value assigned to the argument at instantiation. |
777 | """ |
778 | out=[] |
779 | for a in self.getArgument(): |
780 | if isinstance(a,Symbol): |
781 | out.append(a.substitute(argvals)) |
782 | else: |
783 | out.append(a) |
784 | return out |
785 | |
786 | def getDifferentiatedArguments(self,arg): |
787 | """ |
788 | Applies differentials to the arguments of this object and returns the |
789 | result as a list. |
790 | |
791 | @param arg: the derivative is calculated with respect to C{arg} |
792 | @type arg: typically L{escript.Symbol} but can also be C{float}, |
793 | L{escript.Data}, C{numarray.NumArray} depending on the |
794 | involved functions and data |
795 | @rtype: C{list} of objects |
796 | @return: list of object obtained by calculating the derivatives of the |
797 | arguments with respect to C{arg} |
798 | """ |
799 | out=[] |
800 | for a in self.getArgument(): |
801 | if isinstance(a,Symbol): |
802 | out.append(a.substitute(argvals)) |
803 | else: |
804 | s=getShape(s)+arg.getShape() |
805 | if len(s)>0: |
806 | out.append(numarray.zeros(s),numarray.Float64) |
807 | else: |
808 | out.append(a) |
809 | return out |
810 | |
811 | def isAppropriateValue(self,arg): |
812 | """ |
813 | Checks if the given argument C{arg} can be used as a substitution for |
814 | this object. The method checks the shape of C{arg} and, if the spatial |
815 | dimension is defined, the spatial dimension of C{arg}. |
816 | |
817 | @param arg: object to be checked |
818 | @type arg: C{numarray.NumArray}, L{escript.Data}, C{float}, C{int}, |
819 | C{Symbol} |
820 | @return: True if C{arg} is a suitable object to be used for substitution, |
821 | False otherwise |
822 | @rtype: C{bool} |
823 | """ |
824 | if isinstance(arg,numarray.NumArray): |
825 | return arg.shape==self.getShape() |
826 | elif isinstance(arg,escript.Data): |
827 | if self.getDim()==None: |
828 | return arg.getShape()==self.getShape() |
829 | elif self.getDim()==arg.getFunctionSpace().getDim(): |
830 | return arg.getShape()==self.getShape() |
831 | else: |
832 | return False |
833 | elif isinstance(arg,Symbol): |
834 | if self.getDim()==None: |
835 | return arg.getShape()==self.getShape() |
836 | elif self.getDim()==arg.getDim(): |
837 | return arg.getShape()==self.getShape() |
838 | else: |
839 | return False |
840 | elif isinstance(arg,float): |
841 | return ()==self.getShape() |
842 | elif isinstance(arg,int): |
843 | return ()==self.getShape() |
844 | else: |
845 | return False |
846 | |
847 | def getMyCode(self,argstrs,format="escript"): |
848 | """ |
849 | Returns program code that can be used to evaluate the symbol. |
850 | |
851 | @param argstrs: a string for each argument representing the argument |
852 | for the evaluation |
853 | @type argstrs: C{list} of C{str} |
854 | @param format: specifies the format to be used. At the moment only |
855 | "escript", "str" and "text" are supported. |
856 | @type format: C{str} |
857 | @return: a piece of program code which can be used to evaluate the |
858 | expression assuming the values for the arguments are available |
859 | @rtype: C{str} |
860 | @raise NotImplementedError: if no implementation for the given format |
861 | is available |
862 | @note: This method has to be overwritten by subclasses. |
863 | """ |
864 | raise NotImplementedError,"no code for %s representation available"%format |
865 | |
866 | def substitute(self,argvals): |
867 | """ |
868 | Assigns new values to symbols in the definition of the symbol. |
869 | |
870 | The method replaces the L{Symbol} u by argvals[u] in the expression |
871 | defining this object. |
872 | |
873 | @param argvals: new values assigned to symbols |
874 | @type argvals: C{dict} with keywords of type L{Symbol} |
875 | @return: result of the substitution process. Operations are executed as |
876 | much as possible. |
877 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
878 | depending on the degree of substitution |
879 | @note: this method has to be overwritten by a particular L{Symbol} |
880 | @raise NotImplementedError: if no implementation for the given format is |
881 | available |
882 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
883 | """ |
884 | if argvals.has_key(self): |
885 | arg=argvals[self] |
886 | if self.isAppropriateValue(arg): |
887 | return arg |
888 | else: |
889 | raise TypeError,"Symbol: new value is not appropriate." |
890 | else: |
891 | raise NotImplementedError,"no substitution in %s avialable"%str(self) |
892 | |
893 | def diff(self,arg): |
894 | """ |
895 | Returns the derivative of the symbol with respect to L{Symbol} C{arg}. |
896 | |
897 | @param arg: the derivative is calculated with respect to C{arg} |
898 | @type arg: typically L{escript.Symbol} but can also be C{float}, |
899 | L{escript.Data}, C{numarray.NumArray} depending on the |
900 | involved functions and data |
901 | @return: derivative with respect to C{arg} |
902 | @rtype: typically L{escript.Symbol} but other types such as C{float}, |
903 | L{escript.Data}, C{numarray.NumArray} are possible |
904 | @note: this method is overwritten by a particular L{Symbol}. |
905 | """ |
906 | if arg==self: |
907 | return identity(self.getShape()) |
908 | else: |
909 | s=self.getShape()+arg.getShape() |
910 | if len(s)>0: |
911 | return numarray.zeros(s,numarray.Float64) |
912 | else: |
913 | return 0. |
914 | |
915 | def __neg__(self): |
916 | """ |
917 | Returns -self. |
918 | |
919 | @return: a L{Symbol} representing the negative of the object |
920 | @rtype: L{DependendSymbol} |
921 | """ |
922 | return self*(-1.) |
923 | |
924 | def __pos__(self): |
925 | """ |
926 | Returns +self. |
927 | |
928 | @return: a L{Symbol} representing the positive of the object |
929 | @rtype: L{DependendSymbol} |
930 | """ |
931 | return self*(1.) |
932 | |
933 | def __abs__(self): |
934 | """ |
935 | Returns a L{Symbol} representing the absolute value of the object. |
936 | """ |
937 | return Abs_Symbol(self) |
938 | |
939 | def __add__(self,other): |
940 | """ |
941 | Adds another object to this object. |
942 | |
943 | @param other: object to be added to this object |
944 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
945 | C{numarray.NumArray}. |
946 | @return: a L{Symbol} representing the sum of this object and C{other} |
947 | @rtype: L{DependendSymbol} |
948 | """ |
949 | return add(self,other) |
950 | |
951 | def __radd__(self,other): |
952 | """ |
953 | Adds this object to another object. |
954 | |
955 | @param other: object to add this object to |
956 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
957 | C{numarray.NumArray} |
958 | @return: a L{Symbol} representing the sum of C{other} and this object |
959 | @rtype: L{DependendSymbol} |
960 | """ |
961 | return add(other,self) |
962 | |
963 | def __sub__(self,other): |
964 | """ |
965 | Subtracts another object from this object. |
966 | |
967 | @param other: object to be subtracted from this object |
968 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
969 | C{numarray.NumArray} |
970 | @return: a L{Symbol} representing the difference of C{other} and this |
971 | object |
972 | @rtype: L{DependendSymbol} |
973 | """ |
974 | return add(self,-other) |
975 | |
976 | def __rsub__(self,other): |
977 | """ |
978 | Subtracts this object from another object. |
979 | |
980 | @param other: object this object is to be subtracted from |
981 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
982 | C{numarray.NumArray} |
983 | @return: a L{Symbol} representing the difference of this object and |
984 | C{other}. |
985 | @rtype: L{DependendSymbol} |
986 | """ |
987 | return add(-self,other) |
988 | |
989 | def __mul__(self,other): |
990 | """ |
991 | Multiplies this object with another object. |
992 | |
993 | @param other: object to be mutiplied by this object |
994 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
995 | C{numarray.NumArray} |
996 | @return: a L{Symbol} representing the product of the object and C{other} |
997 | @rtype: L{DependendSymbol} or 0 if other is identical to zero. |
998 | """ |
999 | return mult(self,other) |
1000 | |
1001 | def __rmul__(self,other): |
1002 | """ |
1003 | Multiplies another object by this object. |
1004 | |
1005 | @param other: object this object is multiplied with |
1006 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
1007 | C{numarray.NumArray} |
1008 | @return: a L{Symbol} representing the product of C{other} and the object |
1009 | @rtype: L{DependendSymbol} or 0 if other is identical to zero |
1010 | """ |
1011 | return mult(other,self) |
1012 | |
1013 | def __div__(self,other): |
1014 | """ |
1015 | Divides this object by another object. |
1016 | |
1017 | @param other: object dividing this object |
1018 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
1019 | C{numarray.NumArray} |
1020 | @return: a L{Symbol} representing the quotient of this object and |
1021 | C{other} |
1022 | @rtype: L{DependendSymbol} |
1023 | """ |
1024 | return quotient(self,other) |
1025 | |
1026 | def __rdiv__(self,other): |
1027 | """ |
1028 | Divides another object by this object. |
1029 | |
1030 | @param other: object to be divided by this object |
1031 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
1032 | C{numarray.NumArray} |
1033 | @return: a L{Symbol} representing the quotient of C{other} and this |
1034 | object |
1035 | @rtype: L{DependendSymbol} or 0 if C{other} is identical to zero |
1036 | """ |
1037 | return quotient(other,self) |
1038 | |
1039 | def __pow__(self,other): |
1040 | """ |
1041 | Raises this object to the power of C{other}. |
1042 | |
1043 | @param other: exponent |
1044 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
1045 | C{numarray.NumArray} |
1046 | @return: a L{Symbol} representing the power of this object to C{other} |
1047 | @rtype: L{DependendSymbol} or 1 if C{other} is identical to zero |
1048 | """ |
1049 | return power(self,other) |
1050 | |
1051 | def __rpow__(self,other): |
1052 | """ |
1053 | Raises an object to the power of this object. |
1054 | |
1055 | @param other: basis |
1056 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, |
1057 | C{numarray.NumArray} |
1058 | @return: a L{Symbol} representing the power of C{other} to this object |
1059 | @rtype: L{DependendSymbol} or 0 if C{other} is identical to zero |
1060 | """ |
1061 | return power(other,self) |
1062 | |
1063 | def __getitem__(self,index): |
1064 | """ |
1065 | Returns the slice defined by C{index}. |
1066 | |
1067 | @param index: the slice index |
1068 | @type index: C{slice} or C{int} or a C{tuple} of them |
1069 | @return: a L{Symbol} representing the slice defined by index |
1070 | @rtype: L{DependendSymbol} |
1071 | """ |
1072 | return GetSlice_Symbol(self,index) |
1073 | |
1074 | class DependendSymbol(Symbol): |
1075 | """ |
1076 | DependendSymbol extents L{Symbol} by modifying the == operator to allow two |
1077 | instances to be equal. Two C{DependendSymbol}s are equal if they have the |
1078 | same shape, the same arguments and one of them has an unspecified spatial |
1079 | dimension or the spatial dimension is identical. |
1080 | |
1081 | Example:: |
1082 | |
1083 | u1=Symbol(shape=(3,4),dim=2,args=[4.]) |
1084 | u2=Symbol(shape=(3,4),dim=2,args=[4.]) |
1085 | print u1==u2 |
1086 | False |
1087 | |
1088 | but:: |
1089 | |
1090 | u1=DependendSymbol(shape=(3,4),dim=2,args=[4.]) |
1091 | u2=DependendSymbol(shape=(3,4),dim=2,args=[4.]) |
1092 | u3=DependendSymbol(shape=(2,),dim=2,args=[4.]) |
1093 | print u1==u2, u1==u3 |
1094 | True False |
1095 | |
1096 | @note: DependendSymbol should be used as return value of functions with |
1097 | L{Symbol} arguments. This will allow the optimizer to remove |
1098 | redundant function calls. |
1099 | """ |
1100 | def __eq__(self,other): |
1101 | """ |
1102 | Checks if C{other} equals self. |
1103 | |
1104 | @param other: any object |
1105 | @return: True if other has the same class as self and the shape, the |
1106 | spatial dimension and the arguments are equal, False otherwise |
1107 | @rtype: C{bool} |
1108 | """ |
1109 | if isinstance(other,DependendSymbol): |
1110 | if self.__class__==other.__class__: |
1111 | if self.getShape()==other.getShape(): |
1112 | if self.getArgument()==other.getArgument(): |
1113 | if self.getDim()==None or other.getDim()==None or self.getDim()==other.getDim(): |
1114 | return True |
1115 | return False |
1116 | |
1117 | def __ne__(self,other): |
1118 | """ |
1119 | Checks if C{other} is not equal to self. |
1120 | |
1121 | @param other: any object |
1122 | @return: False if other has the same class as self and the shape, the |
1123 | spatial dimension and the arguments are equal, True otherwise |
1124 | @rtype: C{bool} |
1125 | """ |
1126 | return not self==other |
1127 | #========================================================= |
1128 | # Unary operations preserving the shape |
1129 | #======================================================== |
1130 | class GetSlice_Symbol(DependendSymbol): |
1131 | """ |
1132 | L{Symbol} representing getting a slice for a L{Symbol}. |
1133 | """ |
1134 | def __init__(self,arg,index): |
1135 | """ |
1136 | Initialization of the L{Symbol} with argument C{arg}. |
1137 | |
1138 | @param arg: argument |
1139 | @type arg: L{Symbol} |
1140 | @param index: defines index |
1141 | @type index: C{slice} or C{int} or a C{tuple} of them |
1142 | @raises IndexError: if length of index is larger than rank of arg or |
1143 | index start or stop is out of range |
1144 | @raises ValueError: if a step is given |
1145 | """ |
1146 | if not isinstance(index,tuple): index=(index,) |
1147 | if len(index)>arg.getRank(): |
1148 | raise IndexError,"GetSlice_Symbol: index out of range." |
1149 | sh=() |
1150 | index2=() |
1151 | for i in range(len(index)): |
1152 | ix=index[i] |
1153 | if isinstance(ix,int): |
1154 | if ix<0 or ix>=arg.getShape()[i]: |
1155 | raise IndexError,"GetSlice_Symbol: index out of range." |
1156 | index2=index2+(ix,) |
1157 | else: |
1158 | if not ix.step==None: |
1159 | raise ValueError,"GetSlice_Symbol: stepping is not supported." |
1160 | if ix.start==None: |
1161 | s=0 |
1162 | else: |
1163 | s=ix.start |
1164 | if ix.stop==None: |
1165 | e=arg.getShape()[i] |
1166 | else: |
1167 | e=ix.stop |
1168 | if e>arg.getShape()[i]: |
1169 | raise IndexError,"GetSlice_Symbol: index out of range." |
1170 | index2=index2+(slice(s,e),) |
1171 | if e>s: |
1172 | sh=sh+(e-s,) |
1173 | elif s>e: |
1174 | raise IndexError,"GetSlice_Symbol: slice start must be less or equal slice end" |
1175 | for i in range(len(index),arg.getRank()): |
1176 | index2=index2+(slice(0,arg.getShape()[i]),) |
1177 | sh=sh+(arg.getShape()[i],) |
1178 | super(GetSlice_Symbol, self).__init__(args=[arg,index2],shape=sh,dim=arg.getDim()) |
1179 | |
1180 | def getMyCode(self,argstrs,format="escript"): |
1181 | """ |
1182 | Returns program code that can be used to evaluate the symbol. |
1183 | |
1184 | @param argstrs: a string for each argument representing the argument |
1185 | for the evaluation |
1186 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1187 | @param format: specifies the format to be used. At the moment only |
1188 | "escript", "str" and "text" are supported. |
1189 | @type format: C{str} |
1190 | @return: a piece of program code which can be used to evaluate the |
1191 | expression assuming the values for the arguments are available |
1192 | @rtype: C{str} |
1193 | @raise NotImplementedError: if no implementation for the given format |
1194 | is available |
1195 | """ |
1196 | if format=="escript" or format=="str" or format=="text": |
1197 | return "%s.__getitem__(%s)"%(argstrs[0],argstrs[1]) |
1198 | else: |
1199 | raise NotImplementedError,"GetItem_Symbol does not provide program code for format %s."%format |
1200 | |
1201 | def substitute(self,argvals): |
1202 | """ |
1203 | Assigns new values to symbols in the definition of the symbol. |
1204 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1205 | defining this object. |
1206 | |
1207 | @param argvals: new values assigned to symbols |
1208 | @type argvals: C{dict} with keywords of type L{Symbol} |
1209 | @return: result of the substitution process. Operations are executed as |
1210 | much as possible. |
1211 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1212 | depending on the degree of substitution |
1213 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1214 | """ |
1215 | if argvals.has_key(self): |
1216 | arg=argvals[self] |
1217 | if self.isAppropriateValue(arg): |
1218 | return arg |
1219 | else: |
1220 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1221 | else: |
1222 | args=self.getSubstitutedArguments(argvals) |
1223 | arg=args[0] |
1224 | index=args[1] |
1225 | return arg.__getitem__(index) |
1226 | |
1227 | def log10(arg): |
1228 | """ |
1229 | Returns base-10 logarithm of argument C{arg}. |
1230 | |
1231 | @param arg: argument |
1232 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1233 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1234 | on the type of C{arg} |
1235 | @raises TypeError: if the type of the argument is not expected |
1236 | """ |
1237 | if isinstance(arg,numarray.NumArray): |
1238 | return numarray.log10(arg) |
1239 | elif isinstance(arg,escript.Data): |
1240 | return arg._log10() |
1241 | elif isinstance(arg,float): |
1242 | return math.log10(arg) |
1243 | elif isinstance(arg,int): |
1244 | return math.log10(float(arg)) |
1245 | elif isinstance(arg,Symbol): |
1246 | return log(arg)/log(10.) |
1247 | else: |
1248 | raise TypeError,"log10: Unknown argument type." |
1249 | |
1250 | def wherePositive(arg): |
1251 | """ |
1252 | Returns mask of positive values of argument C{arg}. |
1253 | |
1254 | @param arg: argument |
1255 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
1256 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1257 | on the type of C{arg} |
1258 | @raises TypeError: if the type of the argument is not expected |
1259 | """ |
1260 | if isinstance(arg,numarray.NumArray): |
1261 | out=numarray.greater(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1262 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1263 | return out |
1264 | elif isinstance(arg,escript.Data): |
1265 | return arg._wherePositive() |
1266 | elif isinstance(arg,float): |
1267 | if arg>0: |
1268 | return 1. |
1269 | else: |
1270 | return 0. |
1271 | elif isinstance(arg,int): |
1272 | if arg>0: |
1273 | return 1. |
1274 | else: |
1275 | return 0. |
1276 | elif isinstance(arg,Symbol): |
1277 | return WherePositive_Symbol(arg) |
1278 | else: |
1279 | raise TypeError,"wherePositive: Unknown argument type." |
1280 | |
1281 | class WherePositive_Symbol(DependendSymbol): |
1282 | """ |
1283 | L{Symbol} representing the result of the mask of positive values function. |
1284 | """ |
1285 | def __init__(self,arg): |
1286 | """ |
1287 | Initialization of wherePositive L{Symbol} with argument C{arg}. |
1288 | |
1289 | @param arg: argument of function |
1290 | @type arg: typically L{Symbol} |
1291 | """ |
1292 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1293 | |
1294 | def getMyCode(self,argstrs,format="escript"): |
1295 | """ |
1296 | Returns program code that can be used to evaluate the symbol. |
1297 | |
1298 | @param argstrs: a string for each argument representing the argument |
1299 | for the evaluation |
1300 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1301 | @param format: specifies the format to be used. At the moment only |
1302 | "escript", "str" and "text" are supported. |
1303 | @type format: C{str} |
1304 | @return: a piece of program code which can be used to evaluate the |
1305 | expression assuming the values for the arguments are available |
1306 | @rtype: C{str} |
1307 | @raise NotImplementedError: if no implementation for the given format |
1308 | is available |
1309 | """ |
1310 | if isinstance(argstrs,list): |
1311 | argstrs=argstrs[0] |
1312 | if format=="escript" or format=="str" or format=="text": |
1313 | return "wherePositive(%s)"%argstrs |
1314 | else: |
1315 | raise NotImplementedError,"WherePositive_Symbol does not provide program code for format %s."%format |
1316 | |
1317 | def substitute(self,argvals): |
1318 | """ |
1319 | Assigns new values to symbols in the definition of the symbol. |
1320 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1321 | defining this object. |
1322 | |
1323 | @param argvals: new values assigned to symbols |
1324 | @type argvals: C{dict} with keywords of type L{Symbol} |
1325 | @return: result of the substitution process. Operations are executed as |
1326 | much as possible. |
1327 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1328 | depending on the degree of substitution |
1329 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1330 | """ |
1331 | if argvals.has_key(self): |
1332 | arg=argvals[self] |
1333 | if self.isAppropriateValue(arg): |
1334 | return arg |
1335 | else: |
1336 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1337 | else: |
1338 | arg=self.getSubstitutedArguments(argvals)[0] |
1339 | return wherePositive(arg) |
1340 | |
1341 | def whereNegative(arg): |
1342 | """ |
1343 | Returns mask of negative values of argument C{arg}. |
1344 | |
1345 | @param arg: argument |
1346 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1347 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1348 | on the type of C{arg} |
1349 | @raises TypeError: if the type of the argument is not expected |
1350 | """ |
1351 | if isinstance(arg,numarray.NumArray): |
1352 | out=numarray.less(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1353 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1354 | return out |
1355 | elif isinstance(arg,escript.Data): |
1356 | return arg._whereNegative() |
1357 | elif isinstance(arg,float): |
1358 | if arg<0: |
1359 | return 1. |
1360 | else: |
1361 | return 0. |
1362 | elif isinstance(arg,int): |
1363 | if arg<0: |
1364 | return 1. |
1365 | else: |
1366 | return 0. |
1367 | elif isinstance(arg,Symbol): |
1368 | return WhereNegative_Symbol(arg) |
1369 | else: |
1370 | raise TypeError,"whereNegative: Unknown argument type." |
1371 | |
1372 | class WhereNegative_Symbol(DependendSymbol): |
1373 | """ |
1374 | L{Symbol} representing the result of the mask of negative values function. |
1375 | """ |
1376 | def __init__(self,arg): |
1377 | """ |
1378 | Initialization of whereNegative L{Symbol} with argument C{arg}. |
1379 | |
1380 | @param arg: argument of function |
1381 | @type arg: typically L{Symbol} |
1382 | """ |
1383 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1384 | |
1385 | def getMyCode(self,argstrs,format="escript"): |
1386 | """ |
1387 | Returns program code that can be used to evaluate the symbol. |
1388 | |
1389 | @param argstrs: a string for each argument representing the argument |
1390 | for the evaluation |
1391 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1392 | @param format: specifies the format to be used. At the moment only |
1393 | "escript", "str" and "text" are supported. |
1394 | @type format: C{str} |
1395 | @return: a piece of program code which can be used to evaluate the |
1396 | expression assuming the values for the arguments are available |
1397 | @rtype: C{str} |
1398 | @raise NotImplementedError: if no implementation for the given format |
1399 | is available |
1400 | """ |
1401 | if isinstance(argstrs,list): |
1402 | argstrs=argstrs[0] |
1403 | if format=="escript" or format=="str" or format=="text": |
1404 | return "whereNegative(%s)"%argstrs |
1405 | else: |
1406 | raise NotImplementedError,"WhereNegative_Symbol does not provide program code for format %s."%format |
1407 | |
1408 | def substitute(self,argvals): |
1409 | """ |
1410 | Assigns new values to symbols in the definition of the symbol. |
1411 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1412 | defining this object. |
1413 | |
1414 | @param argvals: new values assigned to symbols |
1415 | @type argvals: C{dict} with keywords of type L{Symbol} |
1416 | @return: result of the substitution process. Operations are executed as |
1417 | much as possible. |
1418 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1419 | depending on the degree of substitution |
1420 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1421 | """ |
1422 | if argvals.has_key(self): |
1423 | arg=argvals[self] |
1424 | if self.isAppropriateValue(arg): |
1425 | return arg |
1426 | else: |
1427 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1428 | else: |
1429 | arg=self.getSubstitutedArguments(argvals)[0] |
1430 | return whereNegative(arg) |
1431 | |
1432 | def whereNonNegative(arg): |
1433 | """ |
1434 | Returns mask of non-negative values of argument C{arg}. |
1435 | |
1436 | @param arg: argument |
1437 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1438 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1439 | on the type of C{arg} |
1440 | @raises TypeError: if the type of the argument is not expected |
1441 | """ |
1442 | if isinstance(arg,numarray.NumArray): |
1443 | out=numarray.greater_equal(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1444 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1445 | return out |
1446 | elif isinstance(arg,escript.Data): |
1447 | return arg._whereNonNegative() |
1448 | elif isinstance(arg,float): |
1449 | if arg<0: |
1450 | return 0. |
1451 | else: |
1452 | return 1. |
1453 | elif isinstance(arg,int): |
1454 | if arg<0: |
1455 | return 0. |
1456 | else: |
1457 | return 1. |
1458 | elif isinstance(arg,Symbol): |
1459 | return 1.-whereNegative(arg) |
1460 | else: |
1461 | raise TypeError,"whereNonNegative: Unknown argument type." |
1462 | |
1463 | def whereNonPositive(arg): |
1464 | """ |
1465 | Returns mask of non-positive values of argument C{arg}. |
1466 | |
1467 | @param arg: argument |
1468 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1469 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1470 | on the type of C{arg} |
1471 | @raises TypeError: if the type of the argument is not expected |
1472 | """ |
1473 | if isinstance(arg,numarray.NumArray): |
1474 | out=numarray.less_equal(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1475 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1476 | return out |
1477 | elif isinstance(arg,escript.Data): |
1478 | return arg._whereNonPositive() |
1479 | elif isinstance(arg,float): |
1480 | if arg>0: |
1481 | return 0. |
1482 | else: |
1483 | return 1. |
1484 | elif isinstance(arg,int): |
1485 | if arg>0: |
1486 | return 0. |
1487 | else: |
1488 | return 1. |
1489 | elif isinstance(arg,Symbol): |
1490 | return 1.-wherePositive(arg) |
1491 | else: |
1492 | raise TypeError,"whereNonPositive: Unknown argument type." |
1493 | |
1494 | def whereZero(arg,tol=0.): |
1495 | """ |
1496 | Returns mask of zero entries of argument C{arg}. |
1497 | |
1498 | @param arg: argument |
1499 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1500 | @param tol: tolerance. Values with absolute value less than tol are accepted |
1501 | as zero. |
1502 | @type tol: C{float} |
1503 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1504 | on the type of C{arg} |
1505 | @raises TypeError: if the type of the argument is not expected |
1506 | """ |
1507 | if isinstance(arg,numarray.NumArray): |
1508 | out=numarray.less_equal(abs(arg)-tol,numarray.zeros(arg.shape,numarray.Float64))*1. |
1509 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1510 | return out |
1511 | elif isinstance(arg,escript.Data): |
1512 | return arg._whereZero(tol) |
1513 | elif isinstance(arg,float): |
1514 | if abs(arg)<=tol: |
1515 | return 1. |
1516 | else: |
1517 | return 0. |
1518 | elif isinstance(arg,int): |
1519 | if abs(float(arg))<=tol: |
1520 | return 1. |
1521 | else: |
1522 | return 0. |
1523 | elif isinstance(arg,Symbol): |
1524 | return WhereZero_Symbol(arg,tol) |
1525 | else: |
1526 | raise TypeError,"whereZero: Unknown argument type." |
1527 | |
1528 | class WhereZero_Symbol(DependendSymbol): |
1529 | """ |
1530 | L{Symbol} representing the result of the mask of zero entries function. |
1531 | """ |
1532 | def __init__(self,arg,tol=0.): |
1533 | """ |
1534 | Initialization of whereZero L{Symbol} with argument C{arg}. |
1535 | |
1536 | @param arg: argument of function |
1537 | @type arg: typically L{Symbol} |
1538 | """ |
1539 | DependendSymbol.__init__(self,args=[arg,tol],shape=arg.getShape(),dim=arg.getDim()) |
1540 | |
1541 | def getMyCode(self,argstrs,format="escript"): |
1542 | """ |
1543 | Returns program code that can be used to evaluate the symbol. |
1544 | |
1545 | @param argstrs: a string for each argument representing the argument |
1546 | for the evaluation |
1547 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1548 | @param format: specifies the format to be used. At the moment only |
1549 | "escript", "str" and "text" are supported. |
1550 | @type format: C{str} |
1551 | @return: a piece of program code which can be used to evaluate the |
1552 | expression assuming the values for the arguments are available |
1553 | @rtype: C{str} |
1554 | @raise NotImplementedError: if no implementation for the given format |
1555 | is available |
1556 | """ |
1557 | if format=="escript" or format=="str" or format=="text": |
1558 | return "whereZero(%s,tol=%s)"%(argstrs[0],argstrs[1]) |
1559 | else: |
1560 | raise NotImplementedError,"WhereZero_Symbol does not provide program code for format %s."%format |
1561 | |
1562 | def substitute(self,argvals): |
1563 | """ |
1564 | Assigns new values to symbols in the definition of the symbol. |
1565 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1566 | defining this object. |
1567 | |
1568 | @param argvals: new values assigned to symbols |
1569 | @type argvals: C{dict} with keywords of type L{Symbol} |
1570 | @return: result of the substitution process. Operations are executed as |
1571 | much as possible. |
1572 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1573 | depending on the degree of substitution |
1574 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1575 | """ |
1576 | if argvals.has_key(self): |
1577 | arg=argvals[self] |
1578 | if self.isAppropriateValue(arg): |
1579 | return arg |
1580 | else: |
1581 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1582 | else: |
1583 | arg=self.getSubstitutedArguments(argvals) |
1584 | return whereZero(arg[0],arg[1]) |
1585 | |
1586 | def whereNonZero(arg,tol=0.): |
1587 | """ |
1588 | Returns mask of values different from zero of argument C{arg}. |
1589 | |
1590 | @param arg: argument |
1591 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
1592 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1593 | on the type of C{arg} |
1594 | @raise TypeError: if the type of the argument is not expected |
1595 | """ |
1596 | if isinstance(arg,numarray.NumArray): |
1597 | out=numarray.greater(abs(arg)-tol,numarray.zeros(arg.shape,numarray.Float64))*1. |
1598 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1599 | return out |
1600 | elif isinstance(arg,escript.Data): |
1601 | return arg._whereNonZero(tol) |
1602 | elif isinstance(arg,float): |
1603 | if abs(arg)>tol: |
1604 | return 1. |
1605 | else: |
1606 | return 0. |
1607 | elif isinstance(arg,int): |
1608 | if abs(float(arg))>tol: |
1609 | return 1. |
1610 | else: |
1611 | return 0. |
1612 | elif isinstance(arg,Symbol): |
1613 | return 1.-whereZero(arg,tol) |
1614 | else: |
1615 | raise TypeError,"whereNonZero: Unknown argument type." |
1616 | |
1617 | def erf(arg): |
1618 | """ |
1619 | Returns the error function M{erf} of argument C{arg}. |
1620 | |
1621 | @param arg: argument |
1622 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
1623 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1624 | on the type of C{arg} |
1625 | @raise TypeError: if the type of the argument is not expected |
1626 | """ |
1627 | if isinstance(arg,escript.Data): |
1628 | return arg._erf() |
1629 | else: |
1630 | raise TypeError,"erf: Unknown argument type." |
1631 | |
1632 | def sin(arg): |
1633 | """ |
1634 | Returns sine of argument C{arg}. |
1635 | |
1636 | @param arg: argument |
1637 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
1638 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1639 | on the type of C{arg} |
1640 | @raise TypeError: if the type of the argument is not expected |
1641 | """ |
1642 | if isinstance(arg,numarray.NumArray): |
1643 | return numarray.sin(arg) |
1644 | elif isinstance(arg,escript.Data): |
1645 | return arg._sin() |
1646 | elif isinstance(arg,float): |
1647 | return math.sin(arg) |
1648 | elif isinstance(arg,int): |
1649 | return math.sin(arg) |
1650 | elif isinstance(arg,Symbol): |
1651 | return Sin_Symbol(arg) |
1652 | else: |
1653 | raise TypeError,"sin: Unknown argument type." |
1654 | |
1655 | class Sin_Symbol(DependendSymbol): |
1656 | """ |
1657 | L{Symbol} representing the result of the sine function. |
1658 | """ |
1659 | def __init__(self,arg): |
1660 | """ |
1661 | Initialization of sin L{Symbol} with argument C{arg}. |
1662 | |
1663 | @param arg: argument of function |
1664 | @type arg: typically L{Symbol} |
1665 | """ |
1666 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1667 | |
1668 | def getMyCode(self,argstrs,format="escript"): |
1669 | """ |
1670 | Returns program code that can be used to evaluate the symbol. |
1671 | |
1672 | @param argstrs: a string for each argument representing the argument |
1673 | for the evaluation |
1674 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1675 | @param format: specifies the format to be used. At the moment only |
1676 | "escript", "str" and "text" are supported. |
1677 | @type format: C{str} |
1678 | @return: a piece of program code which can be used to evaluate the |
1679 | expression assuming the values for the arguments are available |
1680 | @rtype: C{str} |
1681 | @raise NotImplementedError: if no implementation for the given format |
1682 | is available |
1683 | """ |
1684 | if isinstance(argstrs,list): |
1685 | argstrs=argstrs[0] |
1686 | if format=="escript" or format=="str" or format=="text": |
1687 | return "sin(%s)"%argstrs |
1688 | else: |
1689 | raise NotImplementedError,"Sin_Symbol does not provide program code for format %s."%format |
1690 | |
1691 | def substitute(self,argvals): |
1692 | """ |
1693 | Assigns new values to symbols in the definition of the symbol. |
1694 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1695 | defining this object. |
1696 | |
1697 | @param argvals: new values assigned to symbols |
1698 | @type argvals: C{dict} with keywords of type L{Symbol} |
1699 | @return: result of the substitution process. Operations are executed as |
1700 | much as possible. |
1701 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1702 | depending on the degree of substitution |
1703 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1704 | """ |
1705 | if argvals.has_key(self): |
1706 | arg=argvals[self] |
1707 | if self.isAppropriateValue(arg): |
1708 | return arg |
1709 | else: |
1710 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1711 | else: |
1712 | arg=self.getSubstitutedArguments(argvals)[0] |
1713 | return sin(arg) |
1714 | |
1715 | def diff(self,arg): |
1716 | """ |
1717 | Differential of this object. |
1718 | |
1719 | @param arg: the derivative is calculated with respect to C{arg} |
1720 | @type arg: L{escript.Symbol} |
1721 | @return: derivative with respect to C{arg} |
1722 | @rtype: typically L{Symbol} but other types such as C{float}, |
1723 | L{escript.Data}, C{numarray.NumArray} are possible |
1724 | """ |
1725 | if arg==self: |
1726 | return identity(self.getShape()) |
1727 | else: |
1728 | myarg=self.getArgument()[0] |
1729 | val=matchShape(cos(myarg),self.getDifferentiatedArguments(arg)[0]) |
1730 | return val[0]*val[1] |
1731 | |
1732 | def cos(arg): |
1733 | """ |
1734 | Returns cosine of argument C{arg}. |
1735 | |
1736 | @param arg: argument |
1737 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1738 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1739 | on the type of C{arg} |
1740 | @raises TypeError: if the type of the argument is not expected |
1741 | """ |
1742 | if isinstance(arg,numarray.NumArray): |
1743 | return numarray.cos(arg) |
1744 | elif isinstance(arg,escript.Data): |
1745 | return arg._cos() |
1746 | elif isinstance(arg,float): |
1747 | return math.cos(arg) |
1748 | elif isinstance(arg,int): |
1749 | return math.cos(arg) |
1750 | elif isinstance(arg,Symbol): |
1751 | return Cos_Symbol(arg) |
1752 | else: |
1753 | raise TypeError,"cos: Unknown argument type." |
1754 | |
1755 | class Cos_Symbol(DependendSymbol): |
1756 | """ |
1757 | L{Symbol} representing the result of the cosine function. |
1758 | """ |
1759 | def __init__(self,arg): |
1760 | """ |
1761 | Initialization of cos L{Symbol} with argument C{arg}. |
1762 | |
1763 | @param arg: argument of function |
1764 | @type arg: typically L{Symbol} |
1765 | """ |
1766 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1767 | |
1768 | def getMyCode(self,argstrs,format="escript"): |
1769 | """ |
1770 | Returns program code that can be used to evaluate the symbol. |
1771 | |
1772 | @param argstrs: a string for each argument representing the argument |
1773 | for the evaluation |
1774 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1775 | @param format: specifies the format to be used. At the moment only |
1776 | "escript", "str" and "text" are supported. |
1777 | @type format: C{str} |
1778 | @return: a piece of program code which can be used to evaluate the |
1779 | expression assuming the values for the arguments are available |
1780 | @rtype: C{str} |
1781 | @raise NotImplementedError: if no implementation for the given format |
1782 | is available |
1783 | """ |
1784 | if isinstance(argstrs,list): |
1785 | argstrs=argstrs[0] |
1786 | if format=="escript" or format=="str" or format=="text": |
1787 | return "cos(%s)"%argstrs |
1788 | else: |
1789 | raise NotImplementedError,"Cos_Symbol does not provide program code for format %s."%format |
1790 | |
1791 | def substitute(self,argvals): |
1792 | """ |
1793 | Assigns new values to symbols in the definition of the symbol. |
1794 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1795 | defining this object. |
1796 | |
1797 | @param argvals: new values assigned to symbols |
1798 | @type argvals: C{dict} with keywords of type L{Symbol} |
1799 | @return: result of the substitution process. Operations are executed as |
1800 | much as possible. |
1801 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1802 | depending on the degree of substitution |
1803 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1804 | """ |
1805 | if argvals.has_key(self): |
1806 | arg=argvals[self] |
1807 | if self.isAppropriateValue(arg): |
1808 | return arg |
1809 | else: |
1810 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1811 | else: |
1812 | arg=self.getSubstitutedArguments(argvals)[0] |
1813 | return cos(arg) |
1814 | |
1815 | def diff(self,arg): |
1816 | """ |
1817 | Differential of this object. |
1818 | |
1819 | @param arg: the derivative is calculated with respect to C{arg} |
1820 | @type arg: L{escript.Symbol} |
1821 | @return: derivative with respect to C{arg} |
1822 | @rtype: typically L{Symbol} but other types such as C{float}, |
1823 | L{escript.Data}, C{numarray.NumArray} are possible |
1824 | """ |
1825 | if arg==self: |
1826 | return identity(self.getShape()) |
1827 | else: |
1828 | myarg=self.getArgument()[0] |
1829 | val=matchShape(-sin(myarg),self.getDifferentiatedArguments(arg)[0]) |
1830 | return val[0]*val[1] |
1831 | |
1832 | def tan(arg): |
1833 | """ |
1834 | Returns tangent of argument C{arg}. |
1835 | |
1836 | @param arg: argument |
1837 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1838 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1839 | on the type of C{arg} |
1840 | @raises TypeError: if the type of the argument is not expected |
1841 | """ |
1842 | if isinstance(arg,numarray.NumArray): |
1843 | return numarray.tan(arg) |
1844 | elif isinstance(arg,escript.Data): |
1845 | return arg._tan() |
1846 | elif isinstance(arg,float): |
1847 | return math.tan(arg) |
1848 | elif isinstance(arg,int): |
1849 | return math.tan(arg) |
1850 | elif isinstance(arg,Symbol): |
1851 | return Tan_Symbol(arg) |
1852 | else: |
1853 | raise TypeError,"tan: Unknown argument type." |
1854 | |
1855 | class Tan_Symbol(DependendSymbol): |
1856 | """ |
1857 | L{Symbol} representing the result of the tangent function. |
1858 | """ |
1859 | def __init__(self,arg): |
1860 | """ |
1861 | Initialization of tan L{Symbol} with argument C{arg}. |
1862 | |
1863 | @param arg: argument of function |
1864 | @type arg: typically L{Symbol} |
1865 | """ |
1866 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1867 | |
1868 | def getMyCode(self,argstrs,format="escript"): |
1869 | """ |
1870 | Returns program code that can be used to evaluate the symbol. |
1871 | |
1872 | @param argstrs: a string for each argument representing the argument |
1873 | for the evaluation |
1874 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1875 | @param format: specifies the format to be used. At the moment only |
1876 | "escript", "str" and "text" are supported. |
1877 | @type format: C{str} |
1878 | @return: a piece of program code which can be used to evaluate the |
1879 | expression assuming the values for the arguments are available |
1880 | @rtype: C{str} |
1881 | @raise NotImplementedError: if no implementation for the given format |
1882 | is available |
1883 | """ |
1884 | if isinstance(argstrs,list): |
1885 | argstrs=argstrs[0] |
1886 | if format=="escript" or format=="str" or format=="text": |
1887 | return "tan(%s)"%argstrs |
1888 | else: |
1889 | raise NotImplementedError,"Tan_Symbol does not provide program code for format %s."%format |
1890 | |
1891 | def substitute(self,argvals): |
1892 | """ |
1893 | Assigns new values to symbols in the definition of the symbol. |
1894 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1895 | defining this object. |
1896 | |
1897 | @param argvals: new values assigned to symbols |
1898 | @type argvals: C{dict} with keywords of type L{Symbol} |
1899 | @return: result of the substitution process. Operations are executed as |
1900 | much as possible. |
1901 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
1902 | depending on the degree of substitution |
1903 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
1904 | """ |
1905 | if argvals.has_key(self): |
1906 | arg=argvals[self] |
1907 | if self.isAppropriateValue(arg): |
1908 | return arg |
1909 | else: |
1910 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1911 | else: |
1912 | arg=self.getSubstitutedArguments(argvals)[0] |
1913 | return tan(arg) |
1914 | |
1915 | def diff(self,arg): |
1916 | """ |
1917 | Differential of this object. |
1918 | |
1919 | @param arg: the derivative is calculated with respect to C{arg} |
1920 | @type arg: L{escript.Symbol} |
1921 | @return: derivative with respect to C{arg} |
1922 | @rtype: typically L{Symbol} but other types such as C{float}, |
1923 | L{escript.Data}, C{numarray.NumArray} are possible |
1924 | """ |
1925 | if arg==self: |
1926 | return identity(self.getShape()) |
1927 | else: |
1928 | myarg=self.getArgument()[0] |
1929 | val=matchShape(1./cos(myarg)**2,self.getDifferentiatedArguments(arg)[0]) |
1930 | return val[0]*val[1] |
1931 | |
1932 | def asin(arg): |
1933 | """ |
1934 | Returns the inverse sine of argument C{arg}. |
1935 | |
1936 | @param arg: argument |
1937 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
1938 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
1939 | on the type of C{arg} |
1940 | @raises TypeError: if the type of the argument is not expected |
1941 | """ |
1942 | if isinstance(arg,numarray.NumArray): |
1943 | return numarray.arcsin(arg) |
1944 | elif isinstance(arg,escript.Data): |
1945 | return arg._asin() |
1946 | elif isinstance(arg,float): |
1947 | return math.asin(arg) |
1948 | elif isinstance(arg,int): |
1949 | return math.asin(arg) |
1950 | elif isinstance(arg,Symbol): |
1951 | return Asin_Symbol(arg) |
1952 | else: |
1953 | raise TypeError,"asin: Unknown argument type." |
1954 | |
1955 | class Asin_Symbol(DependendSymbol): |
1956 | """ |
1957 | L{Symbol} representing the result of the inverse sine function. |
1958 | """ |
1959 | def __init__(self,arg): |
1960 | """ |
1961 | Initialization of asin L{Symbol} with argument C{arg}. |
1962 | |
1963 | @param arg: argument of function |
1964 | @type arg: typically L{Symbol} |
1965 | """ |
1966 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1967 | |
1968 | def getMyCode(self,argstrs,format="escript"): |
1969 | """ |
1970 | Returns program code that can be used to evaluate the symbol. |
1971 | |
1972 | @param argstrs: a string for each argument representing the argument |
1973 | for the evaluation |
1974 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
1975 | @param format: specifies the format to be used. At the moment only |
1976 | "escript", "str" and "text" are supported. |
1977 | @type format: C{str} |
1978 | @return: a piece of program code which can be used to evaluate the |
1979 | expression assuming the values for the arguments are available |
1980 | @rtype: C{str} |
1981 | @raise NotImplementedError: if no implementation for the given format |
1982 | is available |
1983 | """ |
1984 | if isinstance(argstrs,list): |
1985 | argstrs=argstrs[0] |
1986 | if format=="escript" or format=="str" or format=="text": |
1987 | return "asin(%s)"%argstrs |
1988 | else: |
1989 | raise NotImplementedError,"Asin_Symbol does not provide program code for format %s."%format |
1990 | |
1991 | def substitute(self,argvals): |
1992 | """ |
1993 | Assigns new values to symbols in the definition of the symbol. |
1994 | The method replaces the L{Symbol} u by argvals[u] in the expression |
1995 | defining this object. |
1996 | |
1997 | @param argvals: new values assigned to symbols |
1998 | @type argvals: C{dict} with keywords of type L{Symbol} |
1999 | @return: result of the substitution process. Operations are executed as |
2000 | much as possible. |
2001 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2002 | depending on the degree of substitution |
2003 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2004 | """ |
2005 | if argvals.has_key(self): |
2006 | arg=argvals[self] |
2007 | if self.isAppropriateValue(arg): |
2008 | return arg |
2009 | else: |
2010 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2011 | else: |
2012 | arg=self.getSubstitutedArguments(argvals)[0] |
2013 | return asin(arg) |
2014 | |
2015 | def diff(self,arg): |
2016 | """ |
2017 | Differential of this object. |
2018 | |
2019 | @param arg: the derivative is calculated with respect to C{arg} |
2020 | @type arg: L{escript.Symbol} |
2021 | @return: derivative with respect to C{arg} |
2022 | @rtype: typically L{Symbol} but other types such as C{float}, |
2023 | L{escript.Data}, C{numarray.NumArray} are possible |
2024 | """ |
2025 | if arg==self: |
2026 | return identity(self.getShape()) |
2027 | else: |
2028 | myarg=self.getArgument()[0] |
2029 | val=matchShape(1./sqrt(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
2030 | return val[0]*val[1] |
2031 | |
2032 | def acos(arg): |
2033 | """ |
2034 | Returns the inverse cosine of argument C{arg}. |
2035 | |
2036 | @param arg: argument |
2037 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2038 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2039 | on the type of C{arg} |
2040 | @raises TypeError: if the type of the argument is not expected |
2041 | """ |
2042 | if isinstance(arg,numarray.NumArray): |
2043 | return numarray.arccos(arg) |
2044 | elif isinstance(arg,escript.Data): |
2045 | return arg._acos() |
2046 | elif isinstance(arg,float): |
2047 | return math.acos(arg) |
2048 | elif isinstance(arg,int): |
2049 | return math.acos(arg) |
2050 | elif isinstance(arg,Symbol): |
2051 | return Acos_Symbol(arg) |
2052 | else: |
2053 | raise TypeError,"acos: Unknown argument type." |
2054 | |
2055 | class Acos_Symbol(DependendSymbol): |
2056 | """ |
2057 | L{Symbol} representing the result of the inverse cosine function. |
2058 | """ |
2059 | def __init__(self,arg): |
2060 | """ |
2061 | Initialization of acos L{Symbol} with argument C{arg}. |
2062 | |
2063 | @param arg: argument of function |
2064 | @type arg: typically L{Symbol} |
2065 | """ |
2066 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2067 | |
2068 | def getMyCode(self,argstrs,format="escript"): |
2069 | """ |
2070 | Returns program code that can be used to evaluate the symbol. |
2071 | |
2072 | @param argstrs: a string for each argument representing the argument |
2073 | for the evaluation |
2074 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2075 | @param format: specifies the format to be used. At the moment only |
2076 | "escript", "str" and "text" are supported. |
2077 | @type format: C{str} |
2078 | @return: a piece of program code which can be used to evaluate the |
2079 | expression assuming the values for the arguments are available |
2080 | @rtype: C{str} |
2081 | @raise NotImplementedError: if no implementation for the given format |
2082 | is available |
2083 | """ |
2084 | if isinstance(argstrs,list): |
2085 | argstrs=argstrs[0] |
2086 | if format=="escript" or format=="str" or format=="text": |
2087 | return "acos(%s)"%argstrs |
2088 | else: |
2089 | raise NotImplementedError,"Acos_Symbol does not provide program code for format %s."%format |
2090 | |
2091 | def substitute(self,argvals): |
2092 | """ |
2093 | Assigns new values to symbols in the definition of the symbol. |
2094 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2095 | defining this object. |
2096 | |
2097 | @param argvals: new values assigned to symbols |
2098 | @type argvals: C{dict} with keywords of type L{Symbol} |
2099 | @return: result of the substitution process. Operations are executed as |
2100 | much as possible. |
2101 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2102 | depending on the degree of substitution |
2103 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2104 | """ |
2105 | if argvals.has_key(self): |
2106 | arg=argvals[self] |
2107 | if self.isAppropriateValue(arg): |
2108 | return arg |
2109 | else: |
2110 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2111 | else: |
2112 | arg=self.getSubstitutedArguments(argvals)[0] |
2113 | return acos(arg) |
2114 | |
2115 | def diff(self,arg): |
2116 | """ |
2117 | Differential of this object. |
2118 | |
2119 | @param arg: the derivative is calculated with respect to C{arg} |
2120 | @type arg: L{escript.Symbol} |
2121 | @return: derivative with respect to C{arg} |
2122 | @rtype: typically L{Symbol} but other types such as C{float}, |
2123 | L{escript.Data}, C{numarray.NumArray} are possible |
2124 | """ |
2125 | if arg==self: |
2126 | return identity(self.getShape()) |
2127 | else: |
2128 | myarg=self.getArgument()[0] |
2129 | val=matchShape(-1./sqrt(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
2130 | return val[0]*val[1] |
2131 | |
2132 | def atan(arg): |
2133 | """ |
2134 | Returns inverse tangent of argument C{arg}. |
2135 | |
2136 | @param arg: argument |
2137 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2138 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2139 | on the type of C{arg} |
2140 | @raises TypeError: if the type of the argument is not expected |
2141 | """ |
2142 | if isinstance(arg,numarray.NumArray): |
2143 | return numarray.arctan(arg) |
2144 | elif isinstance(arg,escript.Data): |
2145 | return arg._atan() |
2146 | elif isinstance(arg,float): |
2147 | return math.atan(arg) |
2148 | elif isinstance(arg,int): |
2149 | return math.atan(arg) |
2150 | elif isinstance(arg,Symbol): |
2151 | return Atan_Symbol(arg) |
2152 | else: |
2153 | raise TypeError,"atan: Unknown argument type." |
2154 | |
2155 | class Atan_Symbol(DependendSymbol): |
2156 | """ |
2157 | L{Symbol} representing the result of the inverse tangent function. |
2158 | """ |
2159 | def __init__(self,arg): |
2160 | """ |
2161 | Initialization of atan L{Symbol} with argument C{arg}. |
2162 | |
2163 | @param arg: argument of function |
2164 | @type arg: typically L{Symbol} |
2165 | """ |
2166 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2167 | |
2168 | def getMyCode(self,argstrs,format="escript"): |
2169 | """ |
2170 | Returns program code that can be used to evaluate the symbol. |
2171 | |
2172 | @param argstrs: a string for each argument representing the argument |
2173 | for the evaluation |
2174 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2175 | @param format: specifies the format to be used. At the moment only |
2176 | "escript", "str" and "text" are supported. |
2177 | @type format: C{str} |
2178 | @return: a piece of program code which can be used to evaluate the |
2179 | expression assuming the values for the arguments are available |
2180 | @rtype: C{str} |
2181 | @raise NotImplementedError: if no implementation for the given format |
2182 | is available |
2183 | """ |
2184 | if isinstance(argstrs,list): |
2185 | argstrs=argstrs[0] |
2186 | if format=="escript" or format=="str" or format=="text": |
2187 | return "atan(%s)"%argstrs |
2188 | else: |
2189 | raise NotImplementedError,"Atan_Symbol does not provide program code for format %s."%format |
2190 | |
2191 | def substitute(self,argvals): |
2192 | """ |
2193 | Assigns new values to symbols in the definition of the symbol. |
2194 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2195 | defining this object. |
2196 | |
2197 | @param argvals: new values assigned to symbols |
2198 | @type argvals: C{dict} with keywords of type L{Symbol} |
2199 | @return: result of the substitution process. Operations are executed as |
2200 | much as possible. |
2201 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2202 | depending on the degree of substitution |
2203 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2204 | """ |
2205 | if argvals.has_key(self): |
2206 | arg=argvals[self] |
2207 | if self.isAppropriateValue(arg): |
2208 | return arg |
2209 | else: |
2210 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2211 | else: |
2212 | arg=self.getSubstitutedArguments(argvals)[0] |
2213 | return atan(arg) |
2214 | |
2215 | def diff(self,arg): |
2216 | """ |
2217 | Differential of this object. |
2218 | |
2219 | @param arg: the derivative is calculated with respect to C{arg} |
2220 | @type arg: L{escript.Symbol} |
2221 | @return: derivative with respect to C{arg} |
2222 | @rtype: typically L{Symbol} but other types such as C{float}, |
2223 | L{escript.Data}, C{numarray.NumArray} are possible |
2224 | """ |
2225 | if arg==self: |
2226 | return identity(self.getShape()) |
2227 | else: |
2228 | myarg=self.getArgument()[0] |
2229 | val=matchShape(1./(1+myarg**2),self.getDifferentiatedArguments(arg)[0]) |
2230 | return val[0]*val[1] |
2231 | |
2232 | def sinh(arg): |
2233 | """ |
2234 | Returns the hyperbolic sine of argument C{arg}. |
2235 | |
2236 | @param arg: argument |
2237 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2238 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2239 | on the type of C{arg} |
2240 | @raises TypeError: if the type of the argument is not expected |
2241 | """ |
2242 | if isinstance(arg,numarray.NumArray): |
2243 | return numarray.sinh(arg) |
2244 | elif isinstance(arg,escript.Data): |
2245 | return arg._sinh() |
2246 | elif isinstance(arg,float): |
2247 | return math.sinh(arg) |
2248 | elif isinstance(arg,int): |
2249 | return math.sinh(arg) |
2250 | elif isinstance(arg,Symbol): |
2251 | return Sinh_Symbol(arg) |
2252 | else: |
2253 | raise TypeError,"sinh: Unknown argument type." |
2254 | |
2255 | class Sinh_Symbol(DependendSymbol): |
2256 | """ |
2257 | L{Symbol} representing the result of the hyperbolic sine function. |
2258 | """ |
2259 | def __init__(self,arg): |
2260 | """ |
2261 | Initialization of sinh L{Symbol} with argument C{arg}. |
2262 | |
2263 | @param arg: argument of function |
2264 | @type arg: typically L{Symbol} |
2265 | """ |
2266 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2267 | |
2268 | def getMyCode(self,argstrs,format="escript"): |
2269 | """ |
2270 | Returns program code that can be used to evaluate the symbol. |
2271 | |
2272 | @param argstrs: a string for each argument representing the argument |
2273 | for the evaluation |
2274 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2275 | @param format: specifies the format to be used. At the moment only |
2276 | "escript", "str" and "text" are supported. |
2277 | @type format: C{str} |
2278 | @return: a piece of program code which can be used to evaluate the |
2279 | expression assuming the values for the arguments are available |
2280 | @rtype: C{str} |
2281 | @raise NotImplementedError: if no implementation for the given format |
2282 | is available |
2283 | """ |
2284 | if isinstance(argstrs,list): |
2285 | argstrs=argstrs[0] |
2286 | if format=="escript" or format=="str" or format=="text": |
2287 | return "sinh(%s)"%argstrs |
2288 | else: |
2289 | raise NotImplementedError,"Sinh_Symbol does not provide program code for format %s."%format |
2290 | |
2291 | def substitute(self,argvals): |
2292 | """ |
2293 | Assigns new values to symbols in the definition of the symbol. |
2294 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2295 | defining this object. |
2296 | |
2297 | @param argvals: new values assigned to symbols |
2298 | @type argvals: C{dict} with keywords of type L{Symbol} |
2299 | @return: result of the substitution process. Operations are executed as |
2300 | much as possible. |
2301 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2302 | depending on the degree of substitution |
2303 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2304 | """ |
2305 | if argvals.has_key(self): |
2306 | arg=argvals[self] |
2307 | if self.isAppropriateValue(arg): |
2308 | return arg |
2309 | else: |
2310 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2311 | else: |
2312 | arg=self.getSubstitutedArguments(argvals)[0] |
2313 | return sinh(arg) |
2314 | |
2315 | def diff(self,arg): |
2316 | """ |
2317 | Differential of this object. |
2318 | |
2319 | @param arg: the derivative is calculated with respect to C{arg} |
2320 | @type arg: L{escript.Symbol} |
2321 | @return: derivative with respect to C{arg} |
2322 | @rtype: typically L{Symbol} but other types such as C{float}, |
2323 | L{escript.Data}, C{numarray.NumArray} are possible |
2324 | """ |
2325 | if arg==self: |
2326 | return identity(self.getShape()) |
2327 | else: |
2328 | myarg=self.getArgument()[0] |
2329 | val=matchShape(cosh(myarg),self.getDifferentiatedArguments(arg)[0]) |
2330 | return val[0]*val[1] |
2331 | |
2332 | def cosh(arg): |
2333 | """ |
2334 | Returns the hyperbolic cosine of argument C{arg}. |
2335 | |
2336 | @param arg: argument |
2337 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2338 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2339 | on the type of C{arg} |
2340 | @raises TypeError: if the type of the argument is not expected |
2341 | """ |
2342 | if isinstance(arg,numarray.NumArray): |
2343 | return numarray.cosh(arg) |
2344 | elif isinstance(arg,escript.Data): |
2345 | return arg._cosh() |
2346 | elif isinstance(arg,float): |
2347 | return math.cosh(arg) |
2348 | elif isinstance(arg,int): |
2349 | return math.cosh(arg) |
2350 | elif isinstance(arg,Symbol): |
2351 | return Cosh_Symbol(arg) |
2352 | else: |
2353 | raise TypeError,"cosh: Unknown argument type." |
2354 | |
2355 | class Cosh_Symbol(DependendSymbol): |
2356 | """ |
2357 | L{Symbol} representing the result of the hyperbolic cosine function. |
2358 | """ |
2359 | def __init__(self,arg): |
2360 | """ |
2361 | Initialization of cosh L{Symbol} with argument C{arg}. |
2362 | |
2363 | @param arg: argument of function |
2364 | @type arg: typically L{Symbol} |
2365 | """ |
2366 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2367 | |
2368 | def getMyCode(self,argstrs,format="escript"): |
2369 | """ |
2370 | Returns program code that can be used to evaluate the symbol. |
2371 | |
2372 | @param argstrs: a string for each argument representing the argument |
2373 | for the evaluation |
2374 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2375 | @param format: specifies the format to be used. At the moment only |
2376 | "escript", "str" and "text" are supported. |
2377 | @type format: C{str} |
2378 | @return: a piece of program code which can be used to evaluate the |
2379 | expression assuming the values for the arguments are available |
2380 | @rtype: C{str} |
2381 | @raise NotImplementedError: if no implementation for the given format |
2382 | is available |
2383 | """ |
2384 | if isinstance(argstrs,list): |
2385 | argstrs=argstrs[0] |
2386 | if format=="escript" or format=="str" or format=="text": |
2387 | return "cosh(%s)"%argstrs |
2388 | else: |
2389 | raise NotImplementedError,"Cosh_Symbol does not provide program code for format %s."%format |
2390 | |
2391 | def substitute(self,argvals): |
2392 | """ |
2393 | Assigns new values to symbols in the definition of the symbol. |
2394 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2395 | defining this object. |
2396 | |
2397 | @param argvals: new values assigned to symbols |
2398 | @type argvals: C{dict} with keywords of type L{Symbol} |
2399 | @return: result of the substitution process. Operations are executed as |
2400 | much as possible. |
2401 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2402 | depending on the degree of substitution |
2403 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2404 | """ |
2405 | if argvals.has_key(self): |
2406 | arg=argvals[self] |
2407 | if self.isAppropriateValue(arg): |
2408 | return arg |
2409 | else: |
2410 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2411 | else: |
2412 | arg=self.getSubstitutedArguments(argvals)[0] |
2413 | return cosh(arg) |
2414 | |
2415 | def diff(self,arg): |
2416 | """ |
2417 | Differential of this object. |
2418 | |
2419 | @param arg: the derivative is calculated with respect to C{arg} |
2420 | @type arg: L{escript.Symbol} |
2421 | @return: derivative with respect to C{arg} |
2422 | @rtype: typically L{Symbol} but other types such as C{float}, |
2423 | L{escript.Data}, C{numarray.NumArray} are possible |
2424 | """ |
2425 | if arg==self: |
2426 | return identity(self.getShape()) |
2427 | else: |
2428 | myarg=self.getArgument()[0] |
2429 | val=matchShape(sinh(myarg),self.getDifferentiatedArguments(arg)[0]) |
2430 | return val[0]*val[1] |
2431 | |
2432 | def tanh(arg): |
2433 | """ |
2434 | Returns the hyperbolic tangent of argument C{arg}. |
2435 | |
2436 | @param arg: argument |
2437 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2438 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2439 | on the type of C{arg} |
2440 | @raises TypeError: if the type of the argument is not expected |
2441 | """ |
2442 | if isinstance(arg,numarray.NumArray): |
2443 | return numarray.tanh(arg) |
2444 | elif isinstance(arg,escript.Data): |
2445 | return arg._tanh() |
2446 | elif isinstance(arg,float): |
2447 | return math.tanh(arg) |
2448 | elif isinstance(arg,int): |
2449 | return math.tanh(arg) |
2450 | elif isinstance(arg,Symbol): |
2451 | return Tanh_Symbol(arg) |
2452 | else: |
2453 | raise TypeError,"tanh: Unknown argument type." |
2454 | |
2455 | class Tanh_Symbol(DependendSymbol): |
2456 | """ |
2457 | L{Symbol} representing the result of the hyperbolic tangent function. |
2458 | """ |
2459 | def __init__(self,arg): |
2460 | """ |
2461 | Initialization of tanh L{Symbol} with argument C{arg}. |
2462 | |
2463 | @param arg: argument of function |
2464 | @type arg: typically L{Symbol} |
2465 | """ |
2466 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2467 | |
2468 | def getMyCode(self,argstrs,format="escript"): |
2469 | """ |
2470 | Returns program code that can be used to evaluate the symbol. |
2471 | |
2472 | @param argstrs: a string for each argument representing the argument |
2473 | for the evaluation |
2474 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2475 | @param format: specifies the format to be used. At the moment only |
2476 | "escript", "str" and "text" are supported. |
2477 | @type format: C{str} |
2478 | @return: a piece of program code which can be used to evaluate the |
2479 | expression assuming the values for the arguments are available |
2480 | @rtype: C{str} |
2481 | @raise NotImplementedError: if no implementation for the given format |
2482 | is available |
2483 | """ |
2484 | if isinstance(argstrs,list): |
2485 | argstrs=argstrs[0] |
2486 | if format=="escript" or format=="str" or format=="text": |
2487 | return "tanh(%s)"%argstrs |
2488 | else: |
2489 | raise NotImplementedError,"Tanh_Symbol does not provide program code for format %s."%format |
2490 | |
2491 | def substitute(self,argvals): |
2492 | """ |
2493 | Assigns new values to symbols in the definition of the symbol. |
2494 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2495 | defining this object. |
2496 | |
2497 | @param argvals: new values assigned to symbols |
2498 | @type argvals: C{dict} with keywords of type L{Symbol} |
2499 | @return: result of the substitution process. Operations are executed as |
2500 | much as possible. |
2501 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2502 | depending on the degree of substitution |
2503 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2504 | """ |
2505 | if argvals.has_key(self): |
2506 | arg=argvals[self] |
2507 | if self.isAppropriateValue(arg): |
2508 | return arg |
2509 | else: |
2510 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2511 | else: |
2512 | arg=self.getSubstitutedArguments(argvals)[0] |
2513 | return tanh(arg) |
2514 | |
2515 | def diff(self,arg): |
2516 | """ |
2517 | Differential of this object. |
2518 | |
2519 | @param arg: the derivative is calculated with respect to C{arg} |
2520 | @type arg: L{escript.Symbol} |
2521 | @return: derivative with respect to C{arg} |
2522 | @rtype: typically L{Symbol} but other types such as C{float}, |
2523 | L{escript.Data}, C{numarray.NumArray} are possible |
2524 | """ |
2525 | if arg==self: |
2526 | return identity(self.getShape()) |
2527 | else: |
2528 | myarg=self.getArgument()[0] |
2529 | val=matchShape(1./cosh(myarg)**2,self.getDifferentiatedArguments(arg)[0]) |
2530 | return val[0]*val[1] |
2531 | |
2532 | def asinh(arg): |
2533 | """ |
2534 | Returns the inverse hyperbolic sine of argument C{arg}. |
2535 | |
2536 | @param arg: argument |
2537 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2538 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2539 | on the type of C{arg} |
2540 | @raises TypeError: if the type of the argument is not expected |
2541 | """ |
2542 | if isinstance(arg,numarray.NumArray): |
2543 | return numarray.arcsinh(arg) |
2544 | elif isinstance(arg,escript.Data): |
2545 | return arg._asinh() |
2546 | elif isinstance(arg,float): |
2547 | return numarray.arcsinh(arg) |
2548 | elif isinstance(arg,int): |
2549 | return numarray.arcsinh(float(arg)) |
2550 | elif isinstance(arg,Symbol): |
2551 | return Asinh_Symbol(arg) |
2552 | else: |
2553 | raise TypeError,"asinh: Unknown argument type." |
2554 | |
2555 | class Asinh_Symbol(DependendSymbol): |
2556 | """ |
2557 | L{Symbol} representing the result of the inverse hyperbolic sine function. |
2558 | """ |
2559 | def __init__(self,arg): |
2560 | """ |
2561 | Initialization of asinh L{Symbol} with argument C{arg}. |
2562 | |
2563 | @param arg: argument of function |
2564 | @type arg: typically L{Symbol} |
2565 | """ |
2566 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2567 | |
2568 | def getMyCode(self,argstrs,format="escript"): |
2569 | """ |
2570 | Returns program code that can be used to evaluate the symbol. |
2571 | |
2572 | @param argstrs: a string for each argument representing the argument |
2573 | for the evaluation |
2574 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2575 | @param format: specifies the format to be used. At the moment only |
2576 | "escript", "str" and "text" are supported. |
2577 | @type format: C{str} |
2578 | @return: a piece of program code which can be used to evaluate the |
2579 | expression assuming the values for the arguments are available |
2580 | @rtype: C{str} |
2581 | @raise NotImplementedError: if no implementation for the given format |
2582 | is available |
2583 | """ |
2584 | if isinstance(argstrs,list): |
2585 | argstrs=argstrs[0] |
2586 | if format=="escript" or format=="str" or format=="text": |
2587 | return "asinh(%s)"%argstrs |
2588 | else: |
2589 | raise NotImplementedError,"Asinh_Symbol does not provide program code for format %s."%format |
2590 | |
2591 | def substitute(self,argvals): |
2592 | """ |
2593 | Assigns new values to symbols in the definition of the symbol. |
2594 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2595 | defining this object. |
2596 | |
2597 | @param argvals: new values assigned to symbols |
2598 | @type argvals: C{dict} with keywords of type L{Symbol} |
2599 | @return: result of the substitution process. Operations are executed as |
2600 | much as possible. |
2601 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2602 | depending on the degree of substitution |
2603 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2604 | """ |
2605 | if argvals.has_key(self): |
2606 | arg=argvals[self] |
2607 | if self.isAppropriateValue(arg): |
2608 | return arg |
2609 | else: |
2610 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2611 | else: |
2612 | arg=self.getSubstitutedArguments(argvals)[0] |
2613 | return asinh(arg) |
2614 | |
2615 | def diff(self,arg): |
2616 | """ |
2617 | Differential of this object. |
2618 | |
2619 | @param arg: the derivative is calculated with respect to C{arg} |
2620 | @type arg: L{escript.Symbol} |
2621 | @return: derivative with respect to C{arg} |
2622 | @rtype: typically L{Symbol} but other types such as C{float}, |
2623 | L{escript.Data}, C{numarray.NumArray} are possible |
2624 | """ |
2625 | if arg==self: |
2626 | return identity(self.getShape()) |
2627 | else: |
2628 | myarg=self.getArgument()[0] |
2629 | val=matchShape(1./sqrt(myarg**2+1),self.getDifferentiatedArguments(arg)[0]) |
2630 | return val[0]*val[1] |
2631 | |
2632 | def acosh(arg): |
2633 | """ |
2634 | Returns the inverse hyperbolic cosine of argument C{arg}. |
2635 | |
2636 | @param arg: argument |
2637 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2638 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2639 | on the type of C{arg} |
2640 | @raises TypeError: if the type of the argument is not expected |
2641 | """ |
2642 | if isinstance(arg,numarray.NumArray): |
2643 | return numarray.arccosh(arg) |
2644 | elif isinstance(arg,escript.Data): |
2645 | return arg._acosh() |
2646 | elif isinstance(arg,float): |
2647 | return numarray.arccosh(arg) |
2648 | elif isinstance(arg,int): |
2649 | return numarray.arccosh(float(arg)) |
2650 | elif isinstance(arg,Symbol): |
2651 | return Acosh_Symbol(arg) |
2652 | else: |
2653 | raise TypeError,"acosh: Unknown argument type." |
2654 | |
2655 | class Acosh_Symbol(DependendSymbol): |
2656 | """ |
2657 | L{Symbol} representing the result of the inverse hyperbolic cosine function. |
2658 | """ |
2659 | def __init__(self,arg): |
2660 | """ |
2661 | Initialization of acosh L{Symbol} with argument C{arg}. |
2662 | |
2663 | @param arg: argument of function |
2664 | @type arg: typically L{Symbol} |
2665 | """ |
2666 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2667 | |
2668 | def getMyCode(self,argstrs,format="escript"): |
2669 | """ |
2670 | Returns program code that can be used to evaluate the symbol. |
2671 | |
2672 | @param argstrs: a string for each argument representing the argument |
2673 | for the evaluation |
2674 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2675 | @param format: specifies the format to be used. At the moment only |
2676 | "escript", "str" and "text" are supported. |
2677 | @type format: C{str} |
2678 | @return: a piece of program code which can be used to evaluate the |
2679 | expression assuming the values for the arguments are available |
2680 | @rtype: C{str} |
2681 | @raise NotImplementedError: if no implementation for the given format |
2682 | is available |
2683 | """ |
2684 | if isinstance(argstrs,list): |
2685 | argstrs=argstrs[0] |
2686 | if format=="escript" or format=="str" or format=="text": |
2687 | return "acosh(%s)"%argstrs |
2688 | else: |
2689 | raise NotImplementedError,"Acosh_Symbol does not provide program code for format %s."%format |
2690 | |
2691 | def substitute(self,argvals): |
2692 | """ |
2693 | Assigns new values to symbols in the definition of the symbol. |
2694 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2695 | defining this object. |
2696 | |
2697 | @param argvals: new values assigned to symbols |
2698 | @type argvals: C{dict} with keywords of type L{Symbol} |
2699 | @return: result of the substitution process. Operations are executed as |
2700 | much as possible. |
2701 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2702 | depending on the degree of substitution |
2703 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2704 | """ |
2705 | if argvals.has_key(self): |
2706 | arg=argvals[self] |
2707 | if self.isAppropriateValue(arg): |
2708 | return arg |
2709 | else: |
2710 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2711 | else: |
2712 | arg=self.getSubstitutedArguments(argvals)[0] |
2713 | return acosh(arg) |
2714 | |
2715 | def diff(self,arg): |
2716 | """ |
2717 | Differential of this object. |
2718 | |
2719 | @param arg: the derivative is calculated with respect to C{arg} |
2720 | @type arg: L{escript.Symbol} |
2721 | @return: derivative with respect to C{arg} |
2722 | @rtype: typically L{Symbol} but other types such as C{float}, |
2723 | L{escript.Data}, C{numarray.NumArray} are possible |
2724 | """ |
2725 | if arg==self: |
2726 | return identity(self.getShape()) |
2727 | else: |
2728 | myarg=self.getArgument()[0] |
2729 | val=matchShape(1./sqrt(myarg**2-1),self.getDifferentiatedArguments(arg)[0]) |
2730 | return val[0]*val[1] |
2731 | |
2732 | def atanh(arg): |
2733 | """ |
2734 | Returns the inverse hyperbolic tangent of argument C{arg}. |
2735 | |
2736 | @param arg: argument |
2737 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2738 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2739 | on the type of C{arg} |
2740 | @raises TypeError: if the type of the argument is not expected |
2741 | """ |
2742 | if isinstance(arg,numarray.NumArray): |
2743 | return numarray.arctanh(arg) |
2744 | elif isinstance(arg,escript.Data): |
2745 | return arg._atanh() |
2746 | elif isinstance(arg,float): |
2747 | return numarray.arctanh(arg) |
2748 | elif isinstance(arg,int): |
2749 | return numarray.arctanh(float(arg)) |
2750 | elif isinstance(arg,Symbol): |
2751 | return Atanh_Symbol(arg) |
2752 | else: |
2753 | raise TypeError,"atanh: Unknown argument type." |
2754 | |
2755 | class Atanh_Symbol(DependendSymbol): |
2756 | """ |
2757 | L{Symbol} representing the result of the inverse hyperbolic tangent function. |
2758 | """ |
2759 | def __init__(self,arg): |
2760 | """ |
2761 | Initialization of atanh L{Symbol} with argument C{arg}. |
2762 | |
2763 | @param arg: argument of function |
2764 | @type arg: typically L{Symbol} |
2765 | """ |
2766 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2767 | |
2768 | def getMyCode(self,argstrs,format="escript"): |
2769 | """ |
2770 | Returns program code that can be used to evaluate the symbol. |
2771 | |
2772 | @param argstrs: a string for each argument representing the argument |
2773 | for the evaluation |
2774 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2775 | @param format: specifies the format to be used. At the moment only |
2776 | "escript", "str" and "text" are supported. |
2777 | @type format: C{str} |
2778 | @return: a piece of program code which can be used to evaluate the |
2779 | expression assuming the values for the arguments are available |
2780 | @rtype: C{str} |
2781 | @raise NotImplementedError: if no implementation for the given format |
2782 | is available |
2783 | """ |
2784 | if isinstance(argstrs,list): |
2785 | argstrs=argstrs[0] |
2786 | if format=="escript" or format=="str" or format=="text": |
2787 | return "atanh(%s)"%argstrs |
2788 | else: |
2789 | raise NotImplementedError,"Atanh_Symbol does not provide program code for format %s."%format |
2790 | |
2791 | def substitute(self,argvals): |
2792 | """ |
2793 | Assigns new values to symbols in the definition of the symbol. |
2794 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2795 | defining this object. |
2796 | |
2797 | @param argvals: new values assigned to symbols |
2798 | @type argvals: C{dict} with keywords of type L{Symbol} |
2799 | @return: result of the substitution process. Operations are executed as |
2800 | much as possible. |
2801 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2802 | depending on the degree of substitution |
2803 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2804 | """ |
2805 | if argvals.has_key(self): |
2806 | arg=argvals[self] |
2807 | if self.isAppropriateValue(arg): |
2808 | return arg |
2809 | else: |
2810 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2811 | else: |
2812 | arg=self.getSubstitutedArguments(argvals)[0] |
2813 | return atanh(arg) |
2814 | |
2815 | def diff(self,arg): |
2816 | """ |
2817 | Differential of this object. |
2818 | |
2819 | @param arg: the derivative is calculated with respect to C{arg} |
2820 | @type arg: L{escript.Symbol} |
2821 | @return: derivative with respect to C{arg} |
2822 | @rtype: typically L{Symbol} but other types such as C{float}, |
2823 | L{escript.Data}, C{numarray.NumArray} are possible |
2824 | """ |
2825 | if arg==self: |
2826 | return identity(self.getShape()) |
2827 | else: |
2828 | myarg=self.getArgument()[0] |
2829 | val=matchShape(1./(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
2830 | return val[0]*val[1] |
2831 | |
2832 | def exp(arg): |
2833 | """ |
2834 | Returns M{e} to the power of argument C{arg}. |
2835 | |
2836 | @param arg: argument |
2837 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
2838 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
2839 | on the type of arg |
2840 | @raises TypeError: if the type of the argument is not expected |
2841 | """ |
2842 | if isinstance(arg,numarray.NumArray): |
2843 | return numarray.exp(arg) |
2844 | elif isinstance(arg,escript.Data): |
2845 | return arg._exp() |
2846 | elif isinstance(arg,float): |
2847 | return math.exp(arg) |
2848 | elif isinstance(arg,int): |
2849 | return math.exp(arg) |
2850 | elif isinstance(arg,Symbol): |
2851 | return Exp_Symbol(arg) |
2852 | else: |
2853 | raise TypeError,"exp: Unknown argument type." |
2854 | |
2855 | class Exp_Symbol(DependendSymbol): |
2856 | """ |
2857 | L{Symbol} representing the result of the exponential function. |
2858 | """ |
2859 | def __init__(self,arg): |
2860 | """ |
2861 | Initialization of exp L{Symbol} with argument C{arg}. |
2862 | |
2863 | @param arg: argument of function |
2864 | @type arg: typically L{Symbol} |
2865 | """ |
2866 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2867 | |
2868 | def getMyCode(self,argstrs,format="escript"): |
2869 | """ |
2870 | Returns program code that can be used to evaluate the symbol. |
2871 | |
2872 | @param argstrs: a string for each argument representing the argument |
2873 | for the evaluation |
2874 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2875 | @param format: specifies the format to be used. At the moment only |
2876 | "escript", "str" and "text" are supported. |
2877 | @type format: C{str} |
2878 | @return: a piece of program code which can be used to evaluate the |
2879 | expression assuming the values for the arguments are available |
2880 | @rtype: C{str} |
2881 | @raise NotImplementedError: if no implementation for the given format |
2882 | is available |
2883 | """ |
2884 | if isinstance(argstrs,list): |
2885 | argstrs=argstrs[0] |
2886 | if format=="escript" or format=="str" or format=="text": |
2887 | return "exp(%s)"%argstrs |
2888 | else: |
2889 | raise NotImplementedError,"Exp_Symbol does not provide program code for format %s."%format |
2890 | |
2891 | def substitute(self,argvals): |
2892 | """ |
2893 | Assigns new values to symbols in the definition of the symbol. |
2894 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2895 | defining this object. |
2896 | |
2897 | @param argvals: new values assigned to symbols |
2898 | @type argvals: C{dict} with keywords of type L{Symbol} |
2899 | @return: result of the substitution process. Operations are executed as |
2900 | much as possible. |
2901 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
2902 | depending on the degree of substitution |
2903 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
2904 | """ |
2905 | if argvals.has_key(self): |
2906 | arg=argvals[self] |
2907 | if self.isAppropriateValue(arg): |
2908 | return arg |
2909 | else: |
2910 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2911 | else: |
2912 | arg=self.getSubstitutedArguments(argvals)[0] |
2913 | return exp(arg) |
2914 | |
2915 | def diff(self,arg): |
2916 | """ |
2917 | Differential of this object. |
2918 | |
2919 | @param arg: the derivative is calculated with respect to C{arg} |
2920 | @type arg: L{escript.Symbol} |
2921 | @return: derivative with respect to C{arg} |
2922 | @rtype: typically L{Symbol} but other types such as C{float}, |
2923 | L{escript.Data}, C{numarray.NumArray} are possible |
2924 | """ |
2925 | if arg==self: |
2926 | return identity(self.getShape()) |
2927 | else: |
2928 | myarg=self.getArgument()[0] |
2929 | val=matchShape(self,self.getDifferentiatedArguments(arg)[0]) |
2930 | return val[0]*val[1] |
2931 | |
2932 | def sqrt(arg): |
2933 | """ |
2934 | Returns the square root of argument C{arg}. |
2935 | |
2936 | @param arg: argument |
2937 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2938 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
2939 | depending on the type of C{arg} |
2940 | @raises TypeError: if the type of the argument is not expected |
2941 | """ |
2942 | if isinstance(arg,numarray.NumArray): |
2943 | return numarray.sqrt(arg) |
2944 | elif isinstance(arg,escript.Data): |
2945 | return arg._sqrt() |
2946 | elif isinstance(arg,float): |
2947 | return math.sqrt(arg) |
2948 | elif isinstance(arg,int): |
2949 | return math.sqrt(arg) |
2950 | elif isinstance(arg,Symbol): |
2951 | return Sqrt_Symbol(arg) |
2952 | else: |
2953 | raise TypeError,"sqrt: Unknown argument type." |
2954 | |
2955 | class Sqrt_Symbol(DependendSymbol): |
2956 | """ |
2957 | L{Symbol} representing the result of the square root function. |
2958 | """ |
2959 | def __init__(self,arg): |
2960 | """ |
2961 | Initialization of sqrt L{Symbol} with argument C{arg}. |
2962 | |
2963 | @param arg: argument of function |
2964 | @type arg: typically L{Symbol} |
2965 | """ |
2966 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2967 | |
2968 | def getMyCode(self,argstrs,format="escript"): |
2969 | """ |
2970 | Returns program code that can be used to evaluate the symbol. |
2971 | |
2972 | @param argstrs: a string for each argument representing the argument |
2973 | for the evaluation |
2974 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
2975 | @param format: specifies the format to be used. At the moment only |
2976 | "escript", "str" and "text" are supported. |
2977 | @type format: C{str} |
2978 | @return: a piece of program code which can be used to evaluate the |
2979 | expression assuming the values for the arguments are available |
2980 | @rtype: C{str} |
2981 | @raise NotImplementedError: if no implementation for the given format |
2982 | is available |
2983 | """ |
2984 | if isinstance(argstrs,list): |
2985 | argstrs=argstrs[0] |
2986 | if format=="escript" or format=="str" or format=="text": |
2987 | return "sqrt(%s)"%argstrs |
2988 | else: |
2989 | raise NotImplementedError,"Sqrt_Symbol does not provide program code for format %s."%format |
2990 | |
2991 | def substitute(self,argvals): |
2992 | """ |
2993 | Assigns new values to symbols in the definition of the symbol. |
2994 | The method replaces the L{Symbol} u by argvals[u] in the expression |
2995 | defining this object. |
2996 | |
2997 | @param argvals: new values assigned to symbols |
2998 | @type argvals: C{dict} with keywords of type L{Symbol} |
2999 | @return: result of the substitution process. Operations are executed as |
3000 | much as possible. |
3001 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3002 | depending on the degree of substitution |
3003 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3004 | """ |
3005 | if argvals.has_key(self): |
3006 | arg=argvals[self] |
3007 | if self.isAppropriateValue(arg): |
3008 | return arg |
3009 | else: |
3010 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3011 | else: |
3012 | arg=self.getSubstitutedArguments(argvals)[0] |
3013 | return sqrt(arg) |
3014 | |
3015 | def diff(self,arg): |
3016 | """ |
3017 | Differential of this object. |
3018 | |
3019 | @param arg: the derivative is calculated with respect to C{arg} |
3020 | @type arg: L{escript.Symbol} |
3021 | @return: derivative with respect to C{arg} |
3022 | @rtype: typically L{Symbol} but other types such as C{float}, |
3023 | L{escript.Data}, C{numarray.NumArray} are possible |
3024 | """ |
3025 | if arg==self: |
3026 | return identity(self.getShape()) |
3027 | else: |
3028 | myarg=self.getArgument()[0] |
3029 | val=matchShape(0.5/self,self.getDifferentiatedArguments(arg)[0]) |
3030 | return val[0]*val[1] |
3031 | |
3032 | def log(arg): |
3033 | """ |
3034 | Returns the natural logarithm of argument C{arg}. |
3035 | |
3036 | @param arg: argument |
3037 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray}. |
3038 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
3039 | on the type of C{arg} |
3040 | @raises TypeError: if the type of the argument is not expected |
3041 | """ |
3042 | if isinstance(arg,numarray.NumArray): |
3043 | return numarray.log(arg) |
3044 | elif isinstance(arg,escript.Data): |
3045 | return arg._log() |
3046 | elif isinstance(arg,float): |
3047 | return math.log(arg) |
3048 | elif isinstance(arg,int): |
3049 | return math.log(arg) |
3050 | elif isinstance(arg,Symbol): |
3051 | return Log_Symbol(arg) |
3052 | else: |
3053 | raise TypeError,"log: Unknown argument type." |
3054 | |
3055 | class Log_Symbol(DependendSymbol): |
3056 | """ |
3057 | L{Symbol} representing the result of the natural logarithm function. |
3058 | """ |
3059 | def __init__(self,arg): |
3060 | """ |
3061 | Initialization of log L{Symbol} with argument C{arg}. |
3062 | |
3063 | @param arg: argument of function |
3064 | @type arg: typically L{Symbol} |
3065 | """ |
3066 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
3067 | |
3068 | def getMyCode(self,argstrs,format="escript"): |
3069 | """ |
3070 | Returns program code that can be used to evaluate the symbol. |
3071 | |
3072 | @param argstrs: a string for each argument representing the argument |
3073 | for the evaluation |
3074 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
3075 | @param format: specifies the format to be used. At the moment only |
3076 | "escript", "str" and "text" are supported. |
3077 | @type format: C{str} |
3078 | @return: a piece of program code which can be used to evaluate the |
3079 | expression assuming the values for the arguments are available |
3080 | @rtype: C{str} |
3081 | @raise NotImplementedError: if no implementation for the given format |
3082 | is available |
3083 | """ |
3084 | if isinstance(argstrs,list): |
3085 | argstrs=argstrs[0] |
3086 | if format=="escript" or format=="str" or format=="text": |
3087 | return "log(%s)"%argstrs |
3088 | else: |
3089 | raise NotImplementedError,"Log_Symbol does not provide program code for format %s."%format |
3090 | |
3091 | def substitute(self,argvals): |
3092 | """ |
3093 | Assigns new values to symbols in the definition of the symbol. |
3094 | The method replaces the L{Symbol} u by argvals[u] in the expression |
3095 | defining this object. |
3096 | |
3097 | @param argvals: new values assigned to symbols |
3098 | @type argvals: C{dict} with keywords of type L{Symbol} |
3099 | @return: result of the substitution process. Operations are executed as |
3100 | much as possible. |
3101 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3102 | depending on the degree of substitution |
3103 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3104 | """ |
3105 | if argvals.has_key(self): |
3106 | arg=argvals[self] |
3107 | if self.isAppropriateValue(arg): |
3108 | return arg |
3109 | else: |
3110 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3111 | else: |
3112 | arg=self.getSubstitutedArguments(argvals)[0] |
3113 | return log(arg) |
3114 | |
3115 | def diff(self,arg): |
3116 | """ |
3117 | Differential of this object. |
3118 | |
3119 | @param arg: the derivative is calculated with respect to C{arg} |
3120 | @type arg: L{escript.Symbol} |
3121 | @return: derivative with respect to C{arg} |
3122 | @rtype: typically L{Symbol} but other types such as C{float}, |
3123 | L{escript.Data}, C{numarray.NumArray} are possible |
3124 | """ |
3125 | if arg==self: |
3126 | return identity(self.getShape()) |
3127 | else: |
3128 | myarg=self.getArgument()[0] |
3129 | val=matchShape(1./arg,self.getDifferentiatedArguments(arg)[0]) |
3130 | return val[0]*val[1] |
3131 | |
3132 | def sign(arg): |
3133 | """ |
3134 | Returns the sign of argument C{arg}. |
3135 | |
3136 | @param arg: argument |
3137 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
3138 | @rtype: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending |
3139 | on the type of C{arg} |
3140 | @raises TypeError: if the type of the argument is not expected |
3141 | """ |
3142 | if isinstance(arg,numarray.NumArray): |
3143 | return wherePositive(arg)-whereNegative(arg) |
3144 | elif isinstance(arg,escript.Data): |
3145 | return arg._sign() |
3146 | elif isinstance(arg,float): |
3147 | if arg>0: |
3148 | return 1. |
3149 | elif arg<0: |
3150 | return -1. |
3151 | else: |
3152 | return 0. |
3153 | elif isinstance(arg,int): |
3154 | if float(arg)>0: |
3155 | return 1. |
3156 | elif float(arg)<0: |
3157 | return -1. |
3158 | else: |
3159 | return 0. |
3160 | elif isinstance(arg,Symbol): |
3161 | return wherePositive(arg)-whereNegative(arg) |
3162 | else: |
3163 | raise TypeError,"sign: Unknown argument type." |
3164 | |
3165 | class Abs_Symbol(DependendSymbol): |
3166 | """ |
3167 | L{Symbol} representing the result of the absolute value function. |
3168 | """ |
3169 | def __init__(self,arg): |
3170 | """ |
3171 | Initialization of abs L{Symbol} with argument C{arg}. |
3172 | |
3173 | @param arg: argument of function |
3174 | @type arg: typically L{Symbol} |
3175 | """ |
3176 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
3177 | |
3178 | def getMyCode(self,argstrs,format="escript"): |
3179 | """ |
3180 | Returns program code that can be used to evaluate the symbol. |
3181 | |
3182 | @param argstrs: a string for each argument representing the argument |
3183 | for the evaluation |
3184 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
3185 | @param format: specifies the format to be used. At the moment only |
3186 | "escript", "str" and "text" are supported. |
3187 | @type format: C{str} |
3188 | @return: a piece of program code which can be used to evaluate the |
3189 | expression assuming the values for the arguments are available |
3190 | @rtype: C{str} |
3191 | @raise NotImplementedError: if no implementation for the given format |
3192 | is available |
3193 | """ |
3194 | if isinstance(argstrs,list): |
3195 | argstrs=argstrs[0] |
3196 | if format=="escript" or format=="str" or format=="text": |
3197 | return "abs(%s)"%argstrs |
3198 | else: |
3199 | raise NotImplementedError,"Abs_Symbol does not provide program code for format %s."%format |
3200 | |
3201 | def substitute(self,argvals): |
3202 | """ |
3203 | Assigns new values to symbols in the definition of the symbol. |
3204 | The method replaces the L{Symbol} u by argvals[u] in the expression |
3205 | defining this object. |
3206 | |
3207 | @param argvals: new values assigned to symbols |
3208 | @type argvals: C{dict} with keywords of type L{Symbol} |
3209 | @return: result of the substitution process. Operations are executed as |
3210 | much as possible. |
3211 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3212 | depending on the degree of substitution |
3213 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3214 | """ |
3215 | if argvals.has_key(self): |
3216 | arg=argvals[self] |
3217 | if self.isAppropriateValue(arg): |
3218 | return arg |
3219 | else: |
3220 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3221 | else: |
3222 | arg=self.getSubstitutedArguments(argvals)[0] |
3223 | return abs(arg) |
3224 | |
3225 | def diff(self,arg): |
3226 | """ |
3227 | Differential of this object. |
3228 | |
3229 | @param arg: the derivative is calculated with respect to C{arg} |
3230 | @type arg: L{escript.Symbol} |
3231 | @return: derivative with respect to C{arg} |
3232 | @rtype: typically L{Symbol} but other types such as C{float}, |
3233 | L{escript.Data}, C{numarray.NumArray} are possible |
3234 | """ |
3235 | if arg==self: |
3236 | return identity(self.getShape()) |
3237 | else: |
3238 | myarg=self.getArgument()[0] |
3239 | val=matchShape(sign(myarg),self.getDifferentiatedArguments(arg)[0]) |
3240 | return val[0]*val[1] |
3241 | |
3242 | def minval(arg): |
3243 | """ |
3244 | Returns the minimum value over all components of C{arg} at each data point. |
3245 | |
3246 | @param arg: argument |
3247 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
3248 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of C{arg} |
3249 | @raises TypeError: if the type of the argument is not expected |
3250 | """ |
3251 | if isinstance(arg,numarray.NumArray): |
3252 | if arg.rank==0: |
3253 | return float(arg) |
3254 | else: |
3255 | return arg.min() |
3256 | elif isinstance(arg,escript.Data): |
3257 | return arg._minval() |
3258 | elif isinstance(arg,float): |
3259 | return arg |
3260 | elif isinstance(arg,int): |
3261 | return float(arg) |
3262 | elif isinstance(arg,Symbol): |
3263 | return Minval_Symbol(arg) |
3264 | else: |
3265 | raise TypeError,"minval: Unknown argument type." |
3266 | |
3267 | class Minval_Symbol(DependendSymbol): |
3268 | """ |
3269 | L{Symbol} representing the result of the minimum value function. |
3270 | """ |
3271 | def __init__(self,arg): |
3272 | """ |
3273 | Initialization of minimum value L{Symbol} with argument C{arg}. |
3274 | |
3275 | @param arg: argument of function |
3276 | @type arg: typically L{Symbol} |
3277 | """ |
3278 | DependendSymbol.__init__(self,args=[arg],shape=(),dim=arg.getDim()) |
3279 | |
3280 | def getMyCode(self,argstrs,format="escript"): |
3281 | """ |
3282 | Returns program code that can be used to evaluate the symbol. |
3283 | |
3284 | @param argstrs: a string for each argument representing the argument |
3285 | for the evaluation |
3286 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
3287 | @param format: specifies the format to be used. At the moment only |
3288 | "escript", "str" and "text" are supported. |
3289 | @type format: C{str} |
3290 | @return: a piece of program code which can be used to evaluate the |
3291 | expression assuming the values for the arguments are available |
3292 | @rtype: C{str} |
3293 | @raise NotImplementedError: if no implementation for the given format |
3294 | is available |
3295 | """ |
3296 | if isinstance(argstrs,list): |
3297 | argstrs=argstrs[0] |
3298 | if format=="escript" or format=="str" or format=="text": |
3299 | return "minval(%s)"%argstrs |
3300 | else: |
3301 | raise NotImplementedError,"Minval_Symbol does not provide program code for format %s."%format |
3302 | |
3303 | def substitute(self,argvals): |
3304 | """ |
3305 | Assigns new values to symbols in the definition of the symbol. |
3306 | The method replaces the L{Symbol} u by argvals[u] in the expression |
3307 | defining this object. |
3308 | |
3309 | @param argvals: new values assigned to symbols |
3310 | @type argvals: C{dict} with keywords of type L{Symbol} |
3311 | @return: result of the substitution process. Operations are executed as |
3312 | much as possible. |
3313 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3314 | depending on the degree of substitution |
3315 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3316 | """ |
3317 | if argvals.has_key(self): |
3318 | arg=argvals[self] |
3319 | if self.isAppropriateValue(arg): |
3320 | return arg |
3321 | else: |
3322 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3323 | else: |
3324 | arg=self.getSubstitutedArguments(argvals)[0] |
3325 | return minval(arg) |
3326 | |
3327 | def maxval(arg): |
3328 | """ |
3329 | Returns the maximum value over all components of C{arg} at each data point. |
3330 | |
3331 | @param arg: argument |
3332 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
3333 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of C{arg} |
3334 | @raises TypeError: if the type of the argument is not expected |
3335 | """ |
3336 | if isinstance(arg,numarray.NumArray): |
3337 | if arg.rank==0: |
3338 | return float(arg) |
3339 | else: |
3340 | return arg.max() |
3341 | elif isinstance(arg,escript.Data): |
3342 | return arg._maxval() |
3343 | elif isinstance(arg,float): |
3344 | return arg |
3345 | elif isinstance(arg,int): |
3346 | return float(arg) |
3347 | elif isinstance(arg,Symbol): |
3348 | return Maxval_Symbol(arg) |
3349 | else: |
3350 | raise TypeError,"maxval: Unknown argument type." |
3351 | |
3352 | class Maxval_Symbol(DependendSymbol): |
3353 | """ |
3354 | L{Symbol} representing the result of the maximum value function. |
3355 | """ |
3356 | def __init__(self,arg): |
3357 | """ |
3358 | Initialization of maximum value L{Symbol} with argument C{arg}. |
3359 | |
3360 | @param arg: argument of function |
3361 | @type arg: typically L{Symbol} |
3362 | """ |
3363 | DependendSymbol.__init__(self,args=[arg],shape=(),dim=arg.getDim()) |
3364 | |
3365 | def getMyCode(self,argstrs,format="escript"): |
3366 | """ |
3367 | Returns program code that can be used to evaluate the symbol. |
3368 | |
3369 | @param argstrs: a string for each argument representing the argument |
3370 | for the evaluation |
3371 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
3372 | @param format: specifies the format to be used. At the moment only |
3373 | "escript", "str" and "text" are supported. |
3374 | @type format: C{str} |
3375 | @return: a piece of program code which can be used to evaluate the |
3376 | expression assuming the values for the arguments are available |
3377 | @rtype: C{str} |
3378 | @raise NotImplementedError: if no implementation for the given format |
3379 | is available |
3380 | """ |
3381 | if isinstance(argstrs,list): |
3382 | argstrs=argstrs[0] |
3383 | if format=="escript" or format=="str" or format=="text": |
3384 | return "maxval(%s)"%argstrs |
3385 | else: |
3386 | raise NotImplementedError,"Maxval_Symbol does not provide program code for format %s."%format |
3387 | |
3388 | def substitute(self,argvals): |
3389 | """ |
3390 | Assigns new values to symbols in the definition of the symbol. |
3391 | The method replaces the L{Symbol} u by argvals[u] in the expression |
3392 | defining this object. |
3393 | |
3394 | @param argvals: new values assigned to symbols |
3395 | @type argvals: C{dict} with keywords of type L{Symbol} |
3396 | @return: result of the substitution process. Operations are executed as |
3397 | much as possible. |
3398 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3399 | depending on the degree of substitution |
3400 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3401 | """ |
3402 | if argvals.has_key(self): |
3403 | arg=argvals[self] |
3404 | if self.isAppropriateValue(arg): |
3405 | return arg |
3406 | else: |
3407 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3408 | else: |
3409 | arg=self.getSubstitutedArguments(argvals)[0] |
3410 | return maxval(arg) |
3411 | |
3412 | def length(arg): |
3413 | """ |
3414 | Returns the length (Euclidean norm) of argument C{arg} at each data point. |
3415 | |
3416 | @param arg: argument |
3417 | @type arg: C{float}, L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
3418 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of C{arg} |
3419 | """ |
3420 | return sqrt(inner(arg,arg)) |
3421 | |
3422 | def trace(arg,axis_offset=0): |
3423 | """ |
3424 | Returns the trace of C{arg} which is the sum of C{arg[k,k]} over k. |
3425 | |
3426 | @param arg: argument |
3427 | @type arg: L{escript.Data}, L{Symbol}, C{numarray.NumArray} |
3428 | @param axis_offset: C{axis_offset} to components to sum over. C{axis_offset} |
3429 | must be non-negative and less than the rank of C{arg} +1. |
3430 | The dimensions of component C{axis_offset} and |
3431 | axis_offset+1 must be equal. |
3432 | @type axis_offset: C{int} |
3433 | @return: trace of arg. The rank of the returned object is rank of C{arg} |
3434 | minus 2. |
3435 | @rtype: L{escript.Data}, L{Symbol}, C{numarray.NumArray} depending on the |
3436 | type of C{arg} |
3437 | """ |
3438 | if isinstance(arg,numarray.NumArray): |
3439 | sh=arg.shape |
3440 | if len(sh)<2: |
3441 | raise ValueError,"rank of argument must be greater than 1" |
3442 | if axis_offset<0 or axis_offset>len(sh)-2: |
3443 | raise ValueError,"axis_offset must be between 0 and %d"%(len(sh)-2) |
3444 | s1=1 |
3445 | for i in range(axis_offset): s1*=sh[i] |
3446 | s2=1 |
3447 | for i in range(axis_offset+2,len(sh)): s2*=sh[i] |
3448 | if not sh[axis_offset] == sh[axis_offset+1]: |
3449 | raise ValueError,"dimensions of component %d and %d must match."%(axis_offset,axis_offset+1) |
3450 | arg_reshaped=numarray.reshape(arg,(s1,sh[axis_offset],sh[axis_offset],s2)) |
3451 | out=numarray.zeros([s1,s2],numarray.Float64) |
3452 | for i1 in range(s1): |
3453 | for i2 in range(s2): |
3454 | for j in range(sh[axis_offset]): out[i1,i2]+=arg_reshaped[i1,j,j,i2] |
3455 | out.resize(sh[:axis_offset]+sh[axis_offset+2:]) |
3456 | return out |
3457 | elif isinstance(arg,escript.Data): |
3458 | if arg.getRank()<2: |
3459 | raise ValueError,"rank of argument must be greater than 1" |
3460 | if axis_offset<0 or axis_offset>arg.getRank()-2: |
3461 | raise ValueError,"axis_offset must be between 0 and %d"%(arg.getRank()-2) |
3462 | s=list(arg.getShape()) |
3463 | if not s[axis_offset] == s[axis_offset+1]: |
3464 | raise ValueError,"dimensions of component %d and %d must match."%(axis_offset,axis_offset+1) |
3465 | return arg._trace(axis_offset) |
3466 | elif isinstance(arg,float): |
3467 | raise TypeError,"illegal argument type float." |
3468 | elif isinstance(arg,int): |
3469 | raise TypeError,"illegal argument type int." |
3470 | elif isinstance(arg,Symbol): |
3471 | return Trace_Symbol(arg,axis_offset) |
3472 | else: |
3473 | raise TypeError,"Unknown argument type." |
3474 | |
3475 | class Trace_Symbol(DependendSymbol): |
3476 | """ |
3477 | L{Symbol} representing the result of the trace function. |
3478 | """ |
3479 | def __init__(self,arg,axis_offset=0): |
3480 | """ |
3481 | Initialization of trace L{Symbol} with argument C{arg}. |
3482 | |
3483 | @param arg: argument of function |
3484 | @type arg: L{Symbol} |
3485 | @param axis_offset: C{axis_offset} to components to sum over. |
3486 | C{axis_offset} must be non-negative and less than the |
3487 | rank of C{arg} +1. The dimensions on component |
3488 | C{axis_offset} and axis_offset+1 must be equal. |
3489 | @type axis_offset: C{int} |
3490 | """ |
3491 | if arg.getRank()<2: |
3492 | raise ValueError,"rank of argument must be greater than 1" |
3493 | if axis_offset<0 or axis_offset>arg.getRank()-2: |
3494 | raise ValueError,"axis_offset must be between 0 and %d"%(arg.getRank()-2) |
3495 | s=list(arg.getShape()) |
3496 | if not s[axis_offset] == s[axis_offset+1]: |
3497 | raise ValueError,"dimensions of component %d and %d must match."%(axis_offset,axis_offset+1) |
3498 | super(Trace_Symbol,self).__init__(args=[arg,axis_offset],shape=tuple(s[0:axis_offset]+s[axis_offset+2:]),dim=arg.getDim()) |
3499 | |
3500 | def getMyCode(self,argstrs,format="escript"): |
3501 | """ |
3502 | Returns program code that can be used to evaluate the symbol. |
3503 | |
3504 | @param argstrs: a string for each argument representing the argument |
3505 | for the evaluation |
3506 | @type argstrs: C{str} or a C{list} of length 1 of C{str} |
3507 | @param format: specifies the format to be used. At the moment only |
3508 | "escript", "str" and "text" are supported. |
3509 | @type format: C{str} |
3510 | @return: a piece of program code which can be used to evaluate the |
3511 | expression assuming the values for the arguments are available |
3512 | @rtype: C{str} |
3513 | @raise NotImplementedError: if no implementation for the given format |
3514 | is available |
3515 | """ |
3516 | if format=="escript" or format=="str" or format=="text": |
3517 | return "trace(%s,axis_offset=%s)"%(argstrs[0],argstrs[1]) |
3518 | else: |
3519 | raise NotImplementedError,"Trace_Symbol does not provide program code for format %s."%format |
3520 | |
3521 | def substitute(self,argvals): |
3522 | """ |
3523 | Assigns new values to symbols in the definition of the symbol. |
3524 | The method replaces the L{Symbol} u by argvals[u] in the expression |
3525 | defining this object. |
3526 | |
3527 | @param argvals: new values assigned to symbols |
3528 | @type argvals: C{dict} with keywords of type L{Symbol} |
3529 | @return: result of the substitution process. Operations are executed as |
3530 | much as possible. |
3531 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, C{numarray.NumArray} |
3532 | depending on the degree of substitution |
3533 | @raise TypeError: if a value for a L{Symbol} cannot be substituted |
3534 | """ |
3535 | if argvals.has_key(self): |
3536 | arg=argvals[self] |
3537 | if self.isAppropriateValue(arg): |
3538 | return arg |
3539 | else: |
3540 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3541 | else: |
3542 | arg=self.getSubstitutedArguments(argvals) |
3543 | return trace(arg[0],axis_offset=arg[1]) |
3544 | |
3545 | def diff(self,arg): |
3546 | """ |
3547 | Differential of this object. |
3548 | |
3549 | @param arg: the derivative is calculated with respect to C{arg} |
3550 | @type arg: L{escript.Symbol} |
3551 | @return: derivative with respect to C{arg} |
3552 | @rtype: typically L{Symbol} but other types such as C{float}, |
3553 | L{escript.Data}, C{numarray.NumArray} are possible |
3554 | """ |
3555 | if arg==self: |
3556 | return identity(self.getShape()) |
3557 | else: |
3558 | return trace(self.getDifferentiatedArguments(arg)[0],axis_offset=self.getArgument()[1]) |
3559 | |
3560 |