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robust function to normalize data object added
1 | # |
2 | # $Id$ |
3 | # |
4 | ####################################################### |
5 | # |
6 | # Copyright 2003-2007 by ACceSS MNRF |
7 | # Copyright 2007 by University of Queensland |
8 | # |
9 | # http://esscc.uq.edu.au |
10 | # Primary Business: Queensland, Australia |
11 | # Licensed under the Open Software License version 3.0 |
12 | # http://www.opensource.org/licenses/osl-3.0.php |
13 | # |
14 | ####################################################### |
15 | # |
16 | |
17 | """ |
18 | Utility functions for escript |
19 | |
20 | @var __author__: name of author |
21 | @var __copyright__: copyrights |
22 | @var __license__: licence agreement |
23 | @var __url__: url entry point on documentation |
24 | @var __version__: version |
25 | @var __date__: date of the version |
26 | @var EPSILON: smallest positive value with 1.<1.+EPSILON |
27 | """ |
28 | |
29 | __author__="Lutz Gross, l.gross@uq.edu.au" |
30 | __copyright__=""" Copyright (c) 2006 by ACcESS MNRF |
31 | http://www.access.edu.au |
32 | Primary Business: Queensland, Australia""" |
33 | __license__="""Licensed under the Open Software License version 3.0 |
34 | http://www.opensource.org/licenses/osl-3.0.php""" |
35 | __url__="http://www.iservo.edu.au/esys/escript" |
36 | __version__="$Revision$" |
37 | __date__="$Date$" |
38 | |
39 | |
40 | import math |
41 | import numarray |
42 | import escript |
43 | import os |
44 | from esys.escript import C_GeneralTensorProduct |
45 | from esys.escript import getVersion |
46 | from esys.escript import printParallelThreadCounts |
47 | |
48 | #========================================================= |
49 | # some helpers: |
50 | #========================================================= |
51 | def getEpsilon(): |
52 | # ------------------------------------------------------------------ |
53 | # Compute EPSILON, the machine precision. The call to daxpp is |
54 | # inTENded to fool compilers that use extra-length registers. |
55 | # 31 Map 1999: Hardwire EPSILON so the debugger can step thru easily. |
56 | # ------------------------------------------------------------------ |
57 | eps = 2.**(-12) |
58 | p=2. |
59 | while p>1.: |
60 | eps/=2. |
61 | p=1.+eps |
62 | return eps*2. |
63 | |
64 | EPSILON=getEpsilon() |
65 | |
66 | def getTagNames(domain): |
67 | """ |
68 | returns a list of the tag names used by the domain |
69 | |
70 | |
71 | @param domain: a domain object |
72 | @type domain: L{escript.Domain} |
73 | @return: a list of the tag name used by the domain. |
74 | @rtype: C{list} of C{str} |
75 | """ |
76 | return [n.strip() for n in domain.showTagNames().split(",") ] |
77 | |
78 | def insertTagNames(domain,**kwargs): |
79 | """ |
80 | inserts tag names into the domain |
81 | |
82 | @param domain: a domain object |
83 | @type domain: C{escript.Domain} |
84 | @keyword <tag name>: tag key assigned to <tag name> |
85 | @type <tag name>: C{int} |
86 | """ |
87 | for k in kwargs: |
88 | domain.setTagMap(k,kwargs[k]) |
89 | |
90 | def insertTaggedValues(target,**kwargs): |
91 | """ |
92 | inserts tagged values into the tagged using tag names |
93 | |
94 | @param target: data to be filled by tagged values |
95 | @type target: L{escript.Data} |
96 | @keyword <tag name>: value to be used for <tag name> |
97 | @type <tag name>: C{float} or {numarray.NumArray} |
98 | @return: C{target} |
99 | @rtype: L{escript.Data} |
100 | """ |
101 | for k in kwargs: |
102 | target.setTaggedValue(k,kwargs[k]) |
103 | return target |
104 | |
105 | def saveVTK(filename,domain=None,**data): |
106 | """ |
107 | writes a L{Data} objects into a files using the the VTK XML file format. |
108 | |
109 | Example:: |
110 | |
111 | tmp=Scalar(..) |
112 | v=Vector(..) |
113 | saveVTK("solution.xml",temperature=tmp,velocity=v) |
114 | |
115 | tmp and v are written into "solution.xml" where tmp is named "temperature" and v is named "velocity" |
116 | |
117 | @param filename: file name of the output file |
118 | @type filename: C{str} |
119 | @param domain: domain of the L{Data} object. If not specified, the domain of the given L{Data} objects is used. |
120 | @type domain: L{escript.Domain} |
121 | @keyword <name>: writes the assigned value to the VTK file using <name> as identifier. |
122 | @type <name>: L{Data} object. |
123 | @note: The data objects have to be defined on the same domain. They may not be in the same L{FunctionSpace} but one cannot expect that all L{FunctionSpace} can be mixed. Typically, data on the boundary and data on the interior cannot be mixed. |
124 | """ |
125 | new_data={} |
126 | for n,d in data.items(): |
127 | if not d.isEmpty(): |
128 | fs=d.getFunctionSpace() |
129 | domain2=fs.getDomain() |
130 | if fs == escript.Solution(domain2): |
131 | new_data[n]=interpolate(d,escript.ContinuousFunction(domain2)) |
132 | elif fs == escript.ReducedSolution(domain2): |
133 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
134 | else: |
135 | new_data[n]=d |
136 | if domain==None: domain=domain2 |
137 | if domain==None: |
138 | raise ValueError,"no domain detected." |
139 | domain.saveVTK(filename,new_data) |
140 | |
141 | def saveDX(filename,domain=None,**data): |
142 | """ |
143 | writes a L{Data} objects into a files using the the DX file format. |
144 | |
145 | Example:: |
146 | |
147 | tmp=Scalar(..) |
148 | v=Vector(..) |
149 | saveDX("solution.dx",temperature=tmp,velocity=v) |
150 | |
151 | tmp and v are written into "solution.dx" where tmp is named "temperature" and v is named "velocity". |
152 | |
153 | @param filename: file name of the output file |
154 | @type filename: C{str} |
155 | @param domain: domain of the L{Data} object. If not specified, the domain of the given L{Data} objects is used. |
156 | @type domain: L{escript.Domain} |
157 | @keyword <name>: writes the assigned value to the DX file using <name> as identifier. The identifier can be used to select the data set when data are imported into DX. |
158 | @type <name>: L{Data} object. |
159 | @note: The data objects have to be defined on the same domain. They may not be in the same L{FunctionSpace} but one cannot expect that all L{FunctionSpace} can be mixed. Typically, data on the boundary and data on the interior cannot be mixed. |
160 | """ |
161 | new_data={} |
162 | for n,d in data.items(): |
163 | if not d.isEmpty(): |
164 | fs=d.getFunctionSpace() |
165 | domain2=fs.getDomain() |
166 | if fs == escript.Solution(domain2): |
167 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
168 | elif fs == escript.ReducedSolution(domain2): |
169 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
170 | elif fs == escript.ContinuousFunction(domain2): |
171 | new_data[n]=interpolate(d,escript.ReducedContinuousFunction(domain2)) |
172 | else: |
173 | new_data[n]=d |
174 | if domain==None: domain=domain2 |
175 | if domain==None: |
176 | raise ValueError,"no domain detected." |
177 | domain.saveDX(filename,new_data) |
178 | |
179 | def kronecker(d=3): |
180 | """ |
181 | return the kronecker S{delta}-symbol |
182 | |
183 | @param d: dimension or an object that has the C{getDim} method defining the dimension |
184 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
185 | @return: the object u of rank 2 with M{u[i,j]=1} for M{i=j} and M{u[i,j]=0} otherwise |
186 | @rtype: L{numarray.NumArray} or L{escript.Data} of rank 2. |
187 | """ |
188 | return identityTensor(d) |
189 | |
190 | def identity(shape=()): |
191 | """ |
192 | return the shape x shape identity tensor |
193 | |
194 | @param shape: input shape for the identity tensor |
195 | @type shape: C{tuple} of C{int} |
196 | @return: array of shape shape x shape with M{u[i,k]=1} for M{i=k} and M{u[i,k]=0} otherwise for len(shape)=1 and, for len(shape)=2: M{u[i,j,k,l]=1} for M{i=k and j=l} and M{u[i,j,k,l]=0} otherwise. |
197 | @rtype: L{numarray.NumArray} of rank 1, rankk 2 or rank 4. |
198 | @raise ValueError: if len(shape)>2. |
199 | """ |
200 | if len(shape)>0: |
201 | out=numarray.zeros(shape+shape,numarray.Float64) |
202 | if len(shape)==1: |
203 | for i0 in range(shape[0]): |
204 | out[i0,i0]=1. |
205 | elif len(shape)==2: |
206 | for i0 in range(shape[0]): |
207 | for i1 in range(shape[1]): |
208 | out[i0,i1,i0,i1]=1. |
209 | else: |
210 | raise ValueError,"identity: length of shape is restricted to 2." |
211 | else: |
212 | out=1. |
213 | return out |
214 | |
215 | def identityTensor(d=3): |
216 | """ |
217 | return the dxd identity matrix |
218 | |
219 | @param d: dimension or an object that has the C{getDim} method defining the dimension |
220 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
221 | @return: the object u of rank 2 with M{u[i,j]=1} for M{i=j} and M{u[i,j]=0} otherwise |
222 | @rtype: L{numarray.NumArray} or L{escript.Data} of rank 2 |
223 | """ |
224 | if isinstance(d,escript.FunctionSpace): |
225 | return escript.Data(identity((d.getDim(),)),d) |
226 | elif isinstance(d,escript.Domain): |
227 | return identity((d.getDim(),)) |
228 | else: |
229 | return identity((d,)) |
230 | |
231 | def identityTensor4(d=3): |
232 | """ |
233 | return the dxdxdxd identity tensor |
234 | |
235 | @param d: dimension or an object that has the C{getDim} method defining the dimension |
236 | @type d: C{int} or any object with a C{getDim} method |
237 | @return: the object u of rank 4 with M{u[i,j,k,l]=1} for M{i=k and j=l} and M{u[i,j,k,l]=0} otherwise |
238 | @rtype: L{numarray.NumArray} or L{escript.Data} of rank 4. |
239 | """ |
240 | if isinstance(d,escript.FunctionSpace): |
241 | return escript.Data(identity((d.getDim(),d.getDim())),d) |
242 | elif isinstance(d,escript.Domain): |
243 | return identity((d.getDim(),d.getDim())) |
244 | else: |
245 | return identity((d,d)) |
246 | |
247 | def unitVector(i=0,d=3): |
248 | """ |
249 | return a unit vector u of dimension d with nonzero index i: |
250 | |
251 | @param i: index |
252 | @type i: C{int} |
253 | @param d: dimension or an object that has the C{getDim} method defining the dimension |
254 | @type d: C{int}, L{escript.Domain} or L{escript.FunctionSpace} |
255 | @return: the object u of rank 1 with M{u[j]=1} for M{j=i} and M{u[i]=0} otherwise |
256 | @rtype: L{numarray.NumArray} or L{escript.Data} of rank 1 |
257 | """ |
258 | return kronecker(d)[i] |
259 | |
260 | #========================================================================= |
261 | # global reduction operations (these functions have no symbolic version) |
262 | #========================================================================= |
263 | def Lsup(arg): |
264 | """ |
265 | returns the Lsup-norm of argument arg. This is the maximum absolute value over all data points. |
266 | This function is equivalent to sup(abs(arg)). |
267 | |
268 | @param arg: argument |
269 | @type arg: C{float}, C{int}, L{escript.Data}, L{numarray.NumArray}. |
270 | @return: maximum value of the absolute value of arg over all components and all data points |
271 | @rtype: C{float} |
272 | @raise TypeError: if type of arg cannot be processed |
273 | """ |
274 | if isinstance(arg,numarray.NumArray): |
275 | return sup(abs(arg)) |
276 | elif isinstance(arg,escript.Data): |
277 | return arg._Lsup() |
278 | elif isinstance(arg,float): |
279 | return abs(arg) |
280 | elif isinstance(arg,int): |
281 | return abs(float(arg)) |
282 | else: |
283 | raise TypeError,"Lsup: Unknown argument type." |
284 | |
285 | def sup(arg): |
286 | """ |
287 | returns the maximum value over all data points. |
288 | |
289 | @param arg: argument |
290 | @type arg: C{float}, C{int}, L{escript.Data}, L{numarray.NumArray}. |
291 | @return: maximum value of arg over all components and all data points |
292 | @rtype: C{float} |
293 | @raise TypeError: if type of arg cannot be processed |
294 | """ |
295 | if isinstance(arg,numarray.NumArray): |
296 | return arg.max() |
297 | elif isinstance(arg,escript.Data): |
298 | return arg._sup() |
299 | elif isinstance(arg,float): |
300 | return arg |
301 | elif isinstance(arg,int): |
302 | return float(arg) |
303 | else: |
304 | raise TypeError,"sup: Unknown argument type." |
305 | |
306 | def inf(arg): |
307 | """ |
308 | returns the maximum value over all data points. |
309 | |
310 | @param arg: argument |
311 | @type arg: C{float}, C{int}, L{escript.Data}, L{numarray.NumArray}. |
312 | @return: minimum value of arg over all components and all data points |
313 | @rtype: C{float} |
314 | @raise TypeError: if type of arg cannot be processed |
315 | """ |
316 | if isinstance(arg,numarray.NumArray): |
317 | return arg.min() |
318 | elif isinstance(arg,escript.Data): |
319 | return arg._inf() |
320 | elif isinstance(arg,float): |
321 | return arg |
322 | elif isinstance(arg,int): |
323 | return float(arg) |
324 | else: |
325 | raise TypeError,"inf: Unknown argument type." |
326 | |
327 | |
328 | #========================================================================= |
329 | # some little helpers |
330 | #========================================================================= |
331 | def getRank(arg): |
332 | """ |
333 | identifies the rank of its argument |
334 | |
335 | @param arg: a given object |
336 | @type arg: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
337 | @return: the rank of the argument |
338 | @rtype: C{int} |
339 | @raise TypeError: if type of arg cannot be processed |
340 | """ |
341 | |
342 | if isinstance(arg,numarray.NumArray): |
343 | return arg.rank |
344 | elif isinstance(arg,escript.Data): |
345 | return arg.getRank() |
346 | elif isinstance(arg,float): |
347 | return 0 |
348 | elif isinstance(arg,int): |
349 | return 0 |
350 | elif isinstance(arg,Symbol): |
351 | return arg.getRank() |
352 | else: |
353 | raise TypeError,"getShape: cannot identify shape" |
354 | def getShape(arg): |
355 | """ |
356 | identifies the shape of its argument |
357 | |
358 | @param arg: a given object |
359 | @type arg: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
360 | @return: the shape of the argument |
361 | @rtype: C{tuple} of C{int} |
362 | @raise TypeError: if type of arg cannot be processed |
363 | """ |
364 | |
365 | if isinstance(arg,numarray.NumArray): |
366 | return arg.shape |
367 | elif isinstance(arg,escript.Data): |
368 | return arg.getShape() |
369 | elif isinstance(arg,float): |
370 | return () |
371 | elif isinstance(arg,int): |
372 | return () |
373 | elif isinstance(arg,Symbol): |
374 | return arg.getShape() |
375 | else: |
376 | raise TypeError,"getShape: cannot identify shape" |
377 | |
378 | def pokeDim(arg): |
379 | """ |
380 | identifies the spatial dimension of its argument |
381 | |
382 | @param arg: a given object |
383 | @type arg: any |
384 | @return: the spatial dimension of the argument, if available, or C{None} |
385 | @rtype: C{int} or C{None} |
386 | """ |
387 | |
388 | if isinstance(arg,escript.Data): |
389 | return arg.getFunctionSpace().getDim() |
390 | elif isinstance(arg,Symbol): |
391 | return arg.getDim() |
392 | else: |
393 | return None |
394 | |
395 | def commonShape(arg0,arg1): |
396 | """ |
397 | returns a shape to which arg0 can be extendent from the right and arg1 can be extended from the left. |
398 | |
399 | @param arg0: an object with a shape (see L{getShape}) |
400 | @param arg1: an object with a shape (see L{getShape}) |
401 | @return: the shape of arg0 or arg1 such that the left port equals the shape of arg0 and the right end equals the shape of arg1. |
402 | @rtype: C{tuple} of C{int} |
403 | @raise ValueError: if no shape can be found. |
404 | """ |
405 | sh0=getShape(arg0) |
406 | sh1=getShape(arg1) |
407 | if len(sh0)<len(sh1): |
408 | if not sh0==sh1[:len(sh0)]: |
409 | raise ValueError,"argument 0 cannot be extended to the shape of argument 1" |
410 | return sh1 |
411 | elif len(sh0)>len(sh1): |
412 | if not sh1==sh0[:len(sh1)]: |
413 | raise ValueError,"argument 1 cannot be extended to the shape of argument 0" |
414 | return sh0 |
415 | else: |
416 | if not sh0==sh1: |
417 | raise ValueError,"argument 1 and argument 0 have not the same shape." |
418 | return sh0 |
419 | |
420 | def commonDim(*args): |
421 | """ |
422 | identifies, if possible, the spatial dimension across a set of objects which may or my not have a spatial dimension. |
423 | |
424 | @param args: given objects |
425 | @return: the spatial dimension of the objects with identifiable dimension (see L{pokeDim}). If none the objects has |
426 | a spatial dimension C{None} is returned. |
427 | @rtype: C{int} or C{None} |
428 | @raise ValueError: if the objects with identifiable dimension don't have the same spatial dimension. |
429 | """ |
430 | out=None |
431 | for a in args: |
432 | d=pokeDim(a) |
433 | if not out==None: |
434 | if not (d==None or out==d): |
435 | raise ValueError,"dimension of arguments don't match" |
436 | else: |
437 | out=d |
438 | return out |
439 | |
440 | def testForZero(arg): |
441 | """ |
442 | test the argument for being identical to Zero |
443 | |
444 | @param arg: a given object |
445 | @type arg: typically L{numarray.NumArray},L{escript.Data},C{float}, C{int} |
446 | @return: True if the argument is identical to zero. |
447 | @rtype: C{bool} |
448 | """ |
449 | if isinstance(arg,numarray.NumArray): |
450 | return not Lsup(arg)>0. |
451 | elif isinstance(arg,escript.Data): |
452 | return False |
453 | elif isinstance(arg,float): |
454 | return not Lsup(arg)>0. |
455 | elif isinstance(arg,int): |
456 | return not Lsup(arg)>0. |
457 | elif isinstance(arg,Symbol): |
458 | return False |
459 | else: |
460 | return False |
461 | |
462 | def matchType(arg0=0.,arg1=0.): |
463 | """ |
464 | converting arg0 and arg1 both to the same type L{numarray.NumArray} or L{escript.Data} or, if one of arg0 or arg1 is of type L{Symbol}, the other one to be of type L{numarray.NumArray} or L{escript.Data}. |
465 | |
466 | @param arg0: first argument |
467 | @type arg0: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
468 | @param arg1: second argument |
469 | @type arg1: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
470 | @return: a tuple representing arg0 and arg1 with the same type or with one of them being a L{Symbol} |
471 | @rtype: C{tuple} of two L{numarray.NumArray}, two L{escript.Data}, a C{Symbol} and one of the types L{numarray.NumArray} or L{escript.Data}. |
472 | @raise TypeError: if type of arg0 or arg1 cannot be processed |
473 | """ |
474 | if isinstance(arg0,numarray.NumArray): |
475 | if isinstance(arg1,numarray.NumArray): |
476 | pass |
477 | elif isinstance(arg1,escript.Data): |
478 | arg0=escript.Data(arg0,arg1.getFunctionSpace()) |
479 | elif isinstance(arg1,float): |
480 | arg1=numarray.array(arg1,type=numarray.Float64) |
481 | elif isinstance(arg1,int): |
482 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
483 | elif isinstance(arg1,Symbol): |
484 | pass |
485 | else: |
486 | raise TypeError,"function: Unknown type of second argument." |
487 | elif isinstance(arg0,escript.Data): |
488 | if isinstance(arg1,numarray.NumArray): |
489 | arg1=escript.Data(arg1,arg0.getFunctionSpace()) |
490 | elif isinstance(arg1,escript.Data): |
491 | pass |
492 | elif isinstance(arg1,float): |
493 | arg1=escript.Data(arg1,(),arg0.getFunctionSpace()) |
494 | elif isinstance(arg1,int): |
495 | arg1=escript.Data(float(arg1),(),arg0.getFunctionSpace()) |
496 | elif isinstance(arg1,Symbol): |
497 | pass |
498 | else: |
499 | raise TypeError,"function: Unknown type of second argument." |
500 | elif isinstance(arg0,Symbol): |
501 | if isinstance(arg1,numarray.NumArray): |
502 | pass |
503 | elif isinstance(arg1,escript.Data): |
504 | pass |
505 | elif isinstance(arg1,float): |
506 | arg1=numarray.array(arg1,type=numarray.Float64) |
507 | elif isinstance(arg1,int): |
508 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
509 | elif isinstance(arg1,Symbol): |
510 | pass |
511 | else: |
512 | raise TypeError,"function: Unknown type of second argument." |
513 | elif isinstance(arg0,float): |
514 | if isinstance(arg1,numarray.NumArray): |
515 | arg0=numarray.array(arg0,type=numarray.Float64) |
516 | elif isinstance(arg1,escript.Data): |
517 | arg0=escript.Data(arg0,arg1.getFunctionSpace()) |
518 | elif isinstance(arg1,float): |
519 | arg0=numarray.array(arg0,type=numarray.Float64) |
520 | arg1=numarray.array(arg1,type=numarray.Float64) |
521 | elif isinstance(arg1,int): |
522 | arg0=numarray.array(arg0,type=numarray.Float64) |
523 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
524 | elif isinstance(arg1,Symbol): |
525 | arg0=numarray.array(arg0,type=numarray.Float64) |
526 | else: |
527 | raise TypeError,"function: Unknown type of second argument." |
528 | elif isinstance(arg0,int): |
529 | if isinstance(arg1,numarray.NumArray): |
530 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
531 | elif isinstance(arg1,escript.Data): |
532 | arg0=escript.Data(float(arg0),arg1.getFunctionSpace()) |
533 | elif isinstance(arg1,float): |
534 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
535 | arg1=numarray.array(arg1,type=numarray.Float64) |
536 | elif isinstance(arg1,int): |
537 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
538 | arg1=numarray.array(float(arg1),type=numarray.Float64) |
539 | elif isinstance(arg1,Symbol): |
540 | arg0=numarray.array(float(arg0),type=numarray.Float64) |
541 | else: |
542 | raise TypeError,"function: Unknown type of second argument." |
543 | else: |
544 | raise TypeError,"function: Unknown type of first argument." |
545 | |
546 | return arg0,arg1 |
547 | |
548 | def matchShape(arg0,arg1): |
549 | """ |
550 | return representations of arg0 amd arg1 which ahve the same shape |
551 | |
552 | @param arg0: a given object |
553 | @type arg0: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, L{Symbol} |
554 | @param arg1: a given object |
555 | @type arg1: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, L{Symbol} |
556 | @return: C{arg0} and C{arg1} where copies are returned when the shape has to be changed. |
557 | @rtype: C{tuple} |
558 | """ |
559 | sh=commonShape(arg0,arg1) |
560 | sh0=getShape(arg0) |
561 | sh1=getShape(arg1) |
562 | if len(sh0)<len(sh): |
563 | return outer(arg0,numarray.ones(sh[len(sh0):],numarray.Float64)),arg1 |
564 | elif len(sh1)<len(sh): |
565 | return arg0,outer(arg1,numarray.ones(sh[len(sh1):],numarray.Float64)) |
566 | else: |
567 | return arg0,arg1 |
568 | #========================================================= |
569 | # symbolic tool box starts here: |
570 | #========================================================= |
571 | class Symbol(object): |
572 | """ |
573 | Symbol class. |
574 | |
575 | Symbol class objects provide the same functionality as L{numarray.NumArray} and L{escript.Data} objects |
576 | but they do not have a value and therefore cannot be plotted or visualize. The main purpose is the possibilty |
577 | calculate derivatives with respect to other Symbols used to define a Symbol. |
578 | |
579 | """ |
580 | def __init__(self,shape=(),args=[],dim=None): |
581 | """ |
582 | Creates an instance of a symbol of a given shape. The symbol may depending on a list of arguments args which may be |
583 | symbols or any other object. |
584 | |
585 | @param args: the arguments of the symbol. |
586 | @type args: C{list} |
587 | @param shape: the shape |
588 | @type shape: C{tuple} of C{int} |
589 | @param dim: spatial dimension of the symbol. If dim=C{None} the spatial dimension is undefined. |
590 | @type dim: C{None} or C{int} |
591 | |
592 | """ |
593 | if len(shape)>4: |
594 | raise ValueError,"Symbol supports only tensors up to order 4" |
595 | self.__args=args |
596 | self.__shape=shape |
597 | self.__dim=dim |
598 | |
599 | def getArgument(self,i=None): |
600 | """ |
601 | returns the i-th argument of the symbol |
602 | |
603 | @param i: index of the argument requested. |
604 | @type i: C{int} or C{None} |
605 | @raise IndexError: if the requested index does not exist |
606 | @return: the vlaue of the i-th argument or i is not specified the list of all arguments. |
607 | @rtype: a single object or a list of objects |
608 | """ |
609 | if i==None: |
610 | return self.__args |
611 | else: |
612 | if i<0 or i>=len(self.__args): |
613 | raise IndexError,"there are only %s arguments"%len(self.__args) |
614 | return self.__args[i] |
615 | |
616 | def getRank(self): |
617 | """ |
618 | the rank of the symbol |
619 | |
620 | @return: the rank of the symbol. This is length of the shape |
621 | @rtype: C{int} |
622 | """ |
623 | return len(self.getShape()) |
624 | |
625 | def getShape(self): |
626 | """ |
627 | the shape of the symbol. |
628 | |
629 | @return: the shape of the symbol. |
630 | @rtype: C{tuple} of C{int} |
631 | """ |
632 | return self.__shape |
633 | |
634 | def getDim(self): |
635 | """ |
636 | the spatial dimension |
637 | |
638 | @return: the spatial dimension |
639 | @rtype: C{int} if the dimension is defined. Otherwise C{None} is returned. |
640 | """ |
641 | return self.__dim |
642 | |
643 | def __str__(self): |
644 | """ |
645 | a string representation of the symbol. |
646 | @return: a string representation of the object |
647 | @rtype: C{str} |
648 | """ |
649 | args=[] |
650 | for arg in self.getArgument(): |
651 | args.append(str(arg)) |
652 | try: |
653 | out=self.getMyCode(args,format="str") |
654 | except NotImplementedError: |
655 | out="<Symbol %s>"%id(self) |
656 | return out |
657 | |
658 | def getSubstitutedArguments(self,argvals): |
659 | """ |
660 | substitutes symbols in the arguments of this object and returns the result as a list. |
661 | |
662 | @param argvals: L{Symbol} and their substitutes. The L{Symbol} u in the expression defining this object is replaced by argvals[u]. |
663 | @type argvals: C{dict} with keywords of type L{Symbol}. |
664 | @rtype: C{list} of objects |
665 | @return: list of the object assigned to the arguments through substitution or for the arguments which are not L{Symbol} the value assigned to the argument at instantiation. |
666 | """ |
667 | out=[] |
668 | for a in self.getArgument(): |
669 | if isinstance(a,Symbol): |
670 | out.append(a.substitute(argvals)) |
671 | else: |
672 | out.append(a) |
673 | return out |
674 | |
675 | def getDifferentiatedArguments(self,arg): |
676 | """ |
677 | applifies differentials to the arguments of this object and returns the result as a list. |
678 | |
679 | @param arg: the derivative is calculated with respect to arg |
680 | @type arg: typically L{escript.Symbol} but can also be C{float}, L{escript.Data}, L{numarray.NumArray} depending the involved functions and data. |
681 | @rtype: C{list} of objects |
682 | @return: list of object obtained by calculating the derivatives of the argumenst with respct to arg |
683 | """ |
684 | out=[] |
685 | for a in self.getArgument(): |
686 | if isinstance(a,Symbol): |
687 | out.append(a.substitute(argvals)) |
688 | else: |
689 | s=getShape(s)+arg.getShape() |
690 | if len(s)>0: |
691 | out.append(numarray.zeros(s),numarray.Float64) |
692 | else: |
693 | out.append(a) |
694 | return out |
695 | |
696 | def isAppropriateValue(self,arg): |
697 | """ |
698 | checks if the given argument arg can be used as a substitution of this object. The method checks |
699 | the shape of arg and, if the spatial dimension is defined, the spatial dimension of arg. |
700 | |
701 | @param arg: a given object |
702 | @type arg: L{numarray.NumArray},L{escript.Data},C{float}, C{int}, C{Symbol} |
703 | @return: True if arg is a suitbale object to be used for substitution. Otherwise False is returned. |
704 | @rtype: C{bool} |
705 | """ |
706 | if isinstance(arg,numarray.NumArray): |
707 | return arg.shape==self.getShape() |
708 | elif isinstance(arg,escript.Data): |
709 | if self.getDim()==None: |
710 | return arg.getShape()==self.getShape() |
711 | elif self.getDim()==arg.getFunctionSpace().getDim(): |
712 | return arg.getShape()==self.getShape() |
713 | else: |
714 | return False |
715 | elif isinstance(arg,Symbol): |
716 | if self.getDim()==None: |
717 | return arg.getShape()==self.getShape() |
718 | elif self.getDim()==arg.getDim(): |
719 | return arg.getShape()==self.getShape() |
720 | else: |
721 | return False |
722 | elif isinstance(arg,float): |
723 | return ()==self.getShape() |
724 | elif isinstance(arg,int): |
725 | return ()==self.getShape() |
726 | else: |
727 | return False |
728 | |
729 | def getMyCode(self,argstrs,format="escript"): |
730 | """ |
731 | returns a program code that can be used to evaluate the symbol. |
732 | |
733 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
734 | @type argstrs: C{list} of C{str}. |
735 | @param format: specifies the format to be used. At the moment only "escript", "str" and "text" are supported. |
736 | @type format: C{str} |
737 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
738 | @rtype: C{str} |
739 | @raise NotImplementedError: if no implementation for the given format is available |
740 | @note: This method has to be overwritten by subclasses. |
741 | """ |
742 | raise NotImplementedError,"no code for %s representation available"%format |
743 | |
744 | def substitute(self,argvals): |
745 | """ |
746 | assigns new values to symbols in the definition of the symbol. |
747 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
748 | |
749 | @param argvals: new values assigned to symbols |
750 | @type argvals: C{dict} with keywords of type L{Symbol}. |
751 | @return: result of the substitution process. Operations are executed as much as possible. |
752 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
753 | @note: this method has to be overwritten by a particular L{Symbol} |
754 | @raise NotImplementedError: if no implementation for the given format is available |
755 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
756 | """ |
757 | if argvals.has_key(self): |
758 | arg=argvals[self] |
759 | if self.isAppropriateValue(arg): |
760 | return arg |
761 | else: |
762 | raise TypeError,"Symbol: new value is not appropriate." |
763 | else: |
764 | raise NotImplementedError,"no substitution in %s avialable"%str(self) |
765 | |
766 | def diff(self,arg): |
767 | """ |
768 | returns the derivative of the symbol with respect to L{Symbol} arg |
769 | |
770 | @param arg: the derivative is calculated with respect to arg |
771 | @type arg: typically L{escript.Symbol} but can also be C{float}, L{escript.Data}, L{numarray.NumArray} depending the involved functions and data. |
772 | @return: derivative with respect to C{arg} |
773 | @rtype: typically L{escript.Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
774 | @note: this method is overwritten by a particular L{Symbol} |
775 | """ |
776 | if arg==self: |
777 | return identity(self.getShape()) |
778 | else: |
779 | s=self.getShape()+arg.getShape() |
780 | if len(s)>0: |
781 | return numarray.zeros(s,numarray.Float64) |
782 | else: |
783 | return 0. |
784 | |
785 | def __neg__(self): |
786 | """ |
787 | returns -self. |
788 | |
789 | @return: a L{Symbol} representing the negative of the object |
790 | @rtype: L{DependendSymbol} |
791 | """ |
792 | return self*(-1.) |
793 | |
794 | def __pos__(self): |
795 | """ |
796 | returns +self. |
797 | |
798 | @return: a L{Symbol} representing the positive of the object |
799 | @rtype: L{DependendSymbol} |
800 | """ |
801 | return self*(1.) |
802 | |
803 | def __abs__(self): |
804 | """ |
805 | returns a L{Symbol} representing the absolute value of the object. |
806 | """ |
807 | return Abs_Symbol(self) |
808 | |
809 | def __add__(self,other): |
810 | """ |
811 | add another object to this object |
812 | |
813 | @param other: object to be added to this object |
814 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
815 | @return: a L{Symbol} representing the sum of this object and C{other} |
816 | @rtype: L{DependendSymbol} |
817 | """ |
818 | return add(self,other) |
819 | |
820 | def __radd__(self,other): |
821 | """ |
822 | add this object to another object |
823 | |
824 | @param other: object this object is added to |
825 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
826 | @return: a L{Symbol} representing the sum of C{other} and this object object |
827 | @rtype: L{DependendSymbol} |
828 | """ |
829 | return add(other,self) |
830 | |
831 | def __sub__(self,other): |
832 | """ |
833 | subtracts another object from this object |
834 | |
835 | @param other: object to be subtracted from this object |
836 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
837 | @return: a L{Symbol} representing the difference of C{other} and this object |
838 | @rtype: L{DependendSymbol} |
839 | """ |
840 | return add(self,-other) |
841 | |
842 | def __rsub__(self,other): |
843 | """ |
844 | subtracts this object from another object |
845 | |
846 | @param other: object this object is been subtracted from |
847 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
848 | @return: a L{Symbol} representing the difference of this object and C{other}. |
849 | @rtype: L{DependendSymbol} |
850 | """ |
851 | return add(-self,other) |
852 | |
853 | def __mul__(self,other): |
854 | """ |
855 | multiplies this object with other object |
856 | |
857 | @param other: object to be mutiplied by this object |
858 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
859 | @return: a L{Symbol} representing the product of the object and C{other}. |
860 | @rtype: L{DependendSymbol} or 0 if other is identical to zero. |
861 | """ |
862 | return mult(self,other) |
863 | |
864 | def __rmul__(self,other): |
865 | """ |
866 | multiplies this object with other object |
867 | |
868 | @param other: object this object is multiplied with |
869 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
870 | @return: a L{Symbol} representing the product of C{other} and the object. |
871 | @rtype: L{DependendSymbol} or 0 if other is identical to zero. |
872 | """ |
873 | return mult(other,self) |
874 | |
875 | def __div__(self,other): |
876 | """ |
877 | divides this object by other object |
878 | |
879 | @param other: object dividing this object |
880 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
881 | @return: a L{Symbol} representing the quotient of this object and C{other} |
882 | @rtype: L{DependendSymbol} |
883 | """ |
884 | return quotient(self,other) |
885 | |
886 | def __rdiv__(self,other): |
887 | """ |
888 | divides this object by other object |
889 | |
890 | @param other: object dividing this object |
891 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
892 | @return: a L{Symbol} representing the quotient of C{other} and this object |
893 | @rtype: L{DependendSymbol} or 0 if C{other} is identical to zero. |
894 | """ |
895 | return quotient(other,self) |
896 | |
897 | def __pow__(self,other): |
898 | """ |
899 | raises this object to the power of other |
900 | |
901 | @param other: exponent |
902 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
903 | @return: a L{Symbol} representing the power of this object to C{other} |
904 | @rtype: L{DependendSymbol} or 1 if C{other} is identical to zero. |
905 | """ |
906 | return power(self,other) |
907 | |
908 | def __rpow__(self,other): |
909 | """ |
910 | raises an object to the power of this object |
911 | |
912 | @param other: basis |
913 | @type other: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray}. |
914 | @return: a L{Symbol} representing the power of C{other} to this object |
915 | @rtype: L{DependendSymbol} or 0 if C{other} is identical to zero. |
916 | """ |
917 | return power(other,self) |
918 | |
919 | def __getitem__(self,index): |
920 | """ |
921 | returns the slice defined by index |
922 | |
923 | @param index: defines a |
924 | @type index: C{slice} or C{int} or a C{tuple} of them |
925 | @return: a L{Symbol} representing the slice defined by index |
926 | @rtype: L{DependendSymbol} |
927 | """ |
928 | return GetSlice_Symbol(self,index) |
929 | |
930 | class DependendSymbol(Symbol): |
931 | """ |
932 | DependendSymbol extents L{Symbol} by modifying the == operator to allow two instances to be equal. |
933 | Two DependendSymbol are equal if they have the same shape, the same arguments and one of them has an unspecified spatial dimension or the spatial dimension is identical |
934 | |
935 | Example:: |
936 | |
937 | u1=Symbol(shape=(3,4),dim=2,args=[4.]) |
938 | u2=Symbol(shape=(3,4),dim=2,args=[4.]) |
939 | print u1==u2 |
940 | False |
941 | |
942 | but:: |
943 | |
944 | u1=DependendSymbol(shape=(3,4),dim=2,args=[4.]) |
945 | u2=DependendSymbol(shape=(3,4),dim=2,args=[4.]) |
946 | u3=DependendSymbol(shape=(2,),dim=2,args=[4.]) |
947 | print u1==u2, u1==u3 |
948 | True False |
949 | |
950 | @note: DependendSymbol should be used as return value of functions with L{Symbol} arguments. This will allow the optimizer to remove redundant function calls. |
951 | """ |
952 | def __eq__(self,other): |
953 | """ |
954 | checks if other equals self |
955 | |
956 | @param other: any object |
957 | @return: True if other has the same class like self, and the shape, the spatial diemsnion and the arguments are equal. |
958 | @rtype: C{bool} |
959 | """ |
960 | if isinstance(other,DependendSymbol): |
961 | if self.__class__==other.__class__: |
962 | if self.getShape()==other.getShape(): |
963 | if self.getArgument()==other.getArgument(): |
964 | if self.getDim()==None or other.getDim()==None or self.getDim()==other.getDim(): |
965 | return True |
966 | return False |
967 | |
968 | def __ne__(self,other): |
969 | """ |
970 | checks if other equals self |
971 | |
972 | @param other: any object |
973 | @return: Flase if other has the same class like self, and the shape, the spatial diemsnion and the arguments are equal. |
974 | @rtype: C{bool} |
975 | """ |
976 | return not self==other |
977 | #========================================================= |
978 | # Unary operations prserving the shape |
979 | #======================================================== |
980 | class GetSlice_Symbol(DependendSymbol): |
981 | """ |
982 | L{Symbol} representing getting a slice for a L{Symbol} |
983 | """ |
984 | def __init__(self,arg,index): |
985 | """ |
986 | initialization of wherePositive L{Symbol} with argument arg |
987 | @param arg: argument |
988 | @type arg: L{Symbol}. |
989 | @param index: defines index |
990 | @type index: C{slice} or C{int} or a C{tuple} of them |
991 | @raises IndexError: if length of index is larger than rank of arg or a index start or stop is out of range |
992 | @raises ValueError: if a step is given |
993 | """ |
994 | if not isinstance(index,tuple): index=(index,) |
995 | if len(index)>arg.getRank(): |
996 | raise IndexError,"GetSlice_Symbol: index out of range." |
997 | sh=() |
998 | index2=() |
999 | for i in range(len(index)): |
1000 | ix=index[i] |
1001 | if isinstance(ix,int): |
1002 | if ix<0 or ix>=arg.getShape()[i]: |
1003 | raise ValueError,"GetSlice_Symbol: index out of range." |
1004 | index2=index2+(ix,) |
1005 | else: |
1006 | if not ix.step==None: |
1007 | raise ValueError,"GetSlice_Symbol: steping is not supported." |
1008 | if ix.start==None: |
1009 | s=0 |
1010 | else: |
1011 | s=ix.start |
1012 | if ix.stop==None: |
1013 | e=arg.getShape()[i] |
1014 | else: |
1015 | e=ix.stop |
1016 | if e>arg.getShape()[i]: |
1017 | raise IndexError,"GetSlice_Symbol: index out of range." |
1018 | index2=index2+(slice(s,e),) |
1019 | if e>s: |
1020 | sh=sh+(e-s,) |
1021 | elif s>e: |
1022 | raise IndexError,"GetSlice_Symbol: slice start must be less or equal slice end" |
1023 | for i in range(len(index),arg.getRank()): |
1024 | index2=index2+(slice(0,arg.getShape()[i]),) |
1025 | sh=sh+(arg.getShape()[i],) |
1026 | super(GetSlice_Symbol, self).__init__(args=[arg,index2],shape=sh,dim=arg.getDim()) |
1027 | |
1028 | def getMyCode(self,argstrs,format="escript"): |
1029 | """ |
1030 | returns a program code that can be used to evaluate the symbol. |
1031 | |
1032 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1033 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1034 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1035 | @type format: C{str} |
1036 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1037 | @rtype: C{str} |
1038 | @raise NotImplementedError: if the requested format is not available |
1039 | """ |
1040 | if format=="escript" or format=="str" or format=="text": |
1041 | return "%s.__getitem__(%s)"%(argstrs[0],argstrs[1]) |
1042 | else: |
1043 | raise NotImplementedError,"GetItem_Symbol does not provide program code for format %s."%format |
1044 | |
1045 | def substitute(self,argvals): |
1046 | """ |
1047 | assigns new values to symbols in the definition of the symbol. |
1048 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1049 | |
1050 | @param argvals: new values assigned to symbols |
1051 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1052 | @return: result of the substitution process. Operations are executed as much as possible. |
1053 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1054 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1055 | """ |
1056 | if argvals.has_key(self): |
1057 | arg=argvals[self] |
1058 | if self.isAppropriateValue(arg): |
1059 | return arg |
1060 | else: |
1061 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1062 | else: |
1063 | args=self.getSubstitutedArguments(argvals) |
1064 | arg=args[0] |
1065 | index=args[1] |
1066 | return arg.__getitem__(index) |
1067 | |
1068 | def log10(arg): |
1069 | """ |
1070 | returns base-10 logarithm of argument arg |
1071 | |
1072 | @param arg: argument |
1073 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1074 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1075 | @raises TypeError: if the type of the argument is not expected. |
1076 | """ |
1077 | if isinstance(arg,numarray.NumArray): |
1078 | return numarray.log10(arg) |
1079 | elif isinstance(arg,escript.Data): |
1080 | return arg._log10() |
1081 | elif isinstance(arg,float): |
1082 | return math.log10(arg) |
1083 | elif isinstance(arg,int): |
1084 | return math.log10(float(arg)) |
1085 | elif isinstance(arg,Symbol): |
1086 | return log(arg)/log(10.) |
1087 | else: |
1088 | raise TypeError,"log10: Unknown argument type." |
1089 | |
1090 | def wherePositive(arg): |
1091 | """ |
1092 | returns mask of positive values of argument arg |
1093 | |
1094 | @param arg: argument |
1095 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1096 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1097 | @raises TypeError: if the type of the argument is not expected. |
1098 | """ |
1099 | if isinstance(arg,numarray.NumArray): |
1100 | out=numarray.greater(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1101 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1102 | return out |
1103 | elif isinstance(arg,escript.Data): |
1104 | return arg._wherePositive() |
1105 | elif isinstance(arg,float): |
1106 | if arg>0: |
1107 | return 1. |
1108 | else: |
1109 | return 0. |
1110 | elif isinstance(arg,int): |
1111 | if arg>0: |
1112 | return 1. |
1113 | else: |
1114 | return 0. |
1115 | elif isinstance(arg,Symbol): |
1116 | return WherePositive_Symbol(arg) |
1117 | else: |
1118 | raise TypeError,"wherePositive: Unknown argument type." |
1119 | |
1120 | class WherePositive_Symbol(DependendSymbol): |
1121 | """ |
1122 | L{Symbol} representing the result of the mask of positive values function |
1123 | """ |
1124 | def __init__(self,arg): |
1125 | """ |
1126 | initialization of wherePositive L{Symbol} with argument arg |
1127 | @param arg: argument of function |
1128 | @type arg: typically L{Symbol}. |
1129 | """ |
1130 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1131 | |
1132 | def getMyCode(self,argstrs,format="escript"): |
1133 | """ |
1134 | returns a program code that can be used to evaluate the symbol. |
1135 | |
1136 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1137 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1138 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1139 | @type format: C{str} |
1140 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1141 | @rtype: C{str} |
1142 | @raise NotImplementedError: if the requested format is not available |
1143 | """ |
1144 | if isinstance(argstrs,list): |
1145 | argstrs=argstrs[0] |
1146 | if format=="escript" or format=="str" or format=="text": |
1147 | return "wherePositive(%s)"%argstrs |
1148 | else: |
1149 | raise NotImplementedError,"WherePositive_Symbol does not provide program code for format %s."%format |
1150 | |
1151 | def substitute(self,argvals): |
1152 | """ |
1153 | assigns new values to symbols in the definition of the symbol. |
1154 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1155 | |
1156 | @param argvals: new values assigned to symbols |
1157 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1158 | @return: result of the substitution process. Operations are executed as much as possible. |
1159 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1160 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1161 | """ |
1162 | if argvals.has_key(self): |
1163 | arg=argvals[self] |
1164 | if self.isAppropriateValue(arg): |
1165 | return arg |
1166 | else: |
1167 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1168 | else: |
1169 | arg=self.getSubstitutedArguments(argvals)[0] |
1170 | return wherePositive(arg) |
1171 | |
1172 | def whereNegative(arg): |
1173 | """ |
1174 | returns mask of positive values of argument arg |
1175 | |
1176 | @param arg: argument |
1177 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1178 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1179 | @raises TypeError: if the type of the argument is not expected. |
1180 | """ |
1181 | if isinstance(arg,numarray.NumArray): |
1182 | out=numarray.less(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1183 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1184 | return out |
1185 | elif isinstance(arg,escript.Data): |
1186 | return arg._whereNegative() |
1187 | elif isinstance(arg,float): |
1188 | if arg<0: |
1189 | return 1. |
1190 | else: |
1191 | return 0. |
1192 | elif isinstance(arg,int): |
1193 | if arg<0: |
1194 | return 1. |
1195 | else: |
1196 | return 0. |
1197 | elif isinstance(arg,Symbol): |
1198 | return WhereNegative_Symbol(arg) |
1199 | else: |
1200 | raise TypeError,"whereNegative: Unknown argument type." |
1201 | |
1202 | class WhereNegative_Symbol(DependendSymbol): |
1203 | """ |
1204 | L{Symbol} representing the result of the mask of positive values function |
1205 | """ |
1206 | def __init__(self,arg): |
1207 | """ |
1208 | initialization of whereNegative L{Symbol} with argument arg |
1209 | @param arg: argument of function |
1210 | @type arg: typically L{Symbol}. |
1211 | """ |
1212 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1213 | |
1214 | def getMyCode(self,argstrs,format="escript"): |
1215 | """ |
1216 | returns a program code that can be used to evaluate the symbol. |
1217 | |
1218 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1219 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1220 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1221 | @type format: C{str} |
1222 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1223 | @rtype: C{str} |
1224 | @raise NotImplementedError: if the requested format is not available |
1225 | """ |
1226 | if isinstance(argstrs,list): |
1227 | argstrs=argstrs[0] |
1228 | if format=="escript" or format=="str" or format=="text": |
1229 | return "whereNegative(%s)"%argstrs |
1230 | else: |
1231 | raise NotImplementedError,"WhereNegative_Symbol does not provide program code for format %s."%format |
1232 | |
1233 | def substitute(self,argvals): |
1234 | """ |
1235 | assigns new values to symbols in the definition of the symbol. |
1236 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1237 | |
1238 | @param argvals: new values assigned to symbols |
1239 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1240 | @return: result of the substitution process. Operations are executed as much as possible. |
1241 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1242 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1243 | """ |
1244 | if argvals.has_key(self): |
1245 | arg=argvals[self] |
1246 | if self.isAppropriateValue(arg): |
1247 | return arg |
1248 | else: |
1249 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1250 | else: |
1251 | arg=self.getSubstitutedArguments(argvals)[0] |
1252 | return whereNegative(arg) |
1253 | |
1254 | def whereNonNegative(arg): |
1255 | """ |
1256 | returns mask of non-negative values of argument arg |
1257 | |
1258 | @param arg: argument |
1259 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1260 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1261 | @raises TypeError: if the type of the argument is not expected. |
1262 | """ |
1263 | if isinstance(arg,numarray.NumArray): |
1264 | out=numarray.greater_equal(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1265 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1266 | return out |
1267 | elif isinstance(arg,escript.Data): |
1268 | return arg._whereNonNegative() |
1269 | elif isinstance(arg,float): |
1270 | if arg<0: |
1271 | return 0. |
1272 | else: |
1273 | return 1. |
1274 | elif isinstance(arg,int): |
1275 | if arg<0: |
1276 | return 0. |
1277 | else: |
1278 | return 1. |
1279 | elif isinstance(arg,Symbol): |
1280 | return 1.-whereNegative(arg) |
1281 | else: |
1282 | raise TypeError,"whereNonNegative: Unknown argument type." |
1283 | |
1284 | def whereNonPositive(arg): |
1285 | """ |
1286 | returns mask of non-positive values of argument arg |
1287 | |
1288 | @param arg: argument |
1289 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1290 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1291 | @raises TypeError: if the type of the argument is not expected. |
1292 | """ |
1293 | if isinstance(arg,numarray.NumArray): |
1294 | out=numarray.less_equal(arg,numarray.zeros(arg.shape,numarray.Float64))*1. |
1295 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1296 | return out |
1297 | elif isinstance(arg,escript.Data): |
1298 | return arg._whereNonPositive() |
1299 | elif isinstance(arg,float): |
1300 | if arg>0: |
1301 | return 0. |
1302 | else: |
1303 | return 1. |
1304 | elif isinstance(arg,int): |
1305 | if arg>0: |
1306 | return 0. |
1307 | else: |
1308 | return 1. |
1309 | elif isinstance(arg,Symbol): |
1310 | return 1.-wherePositive(arg) |
1311 | else: |
1312 | raise TypeError,"whereNonPositive: Unknown argument type." |
1313 | |
1314 | def whereZero(arg,tol=0.): |
1315 | """ |
1316 | returns mask of zero entries of argument arg |
1317 | |
1318 | @param arg: argument |
1319 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1320 | @param tol: tolerance. values with absolute value less then tol are accepted as zero. |
1321 | @type tol: C{float} |
1322 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1323 | @raises TypeError: if the type of the argument is not expected. |
1324 | """ |
1325 | if isinstance(arg,numarray.NumArray): |
1326 | out=numarray.less_equal(abs(arg)-tol,numarray.zeros(arg.shape,numarray.Float64))*1. |
1327 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1328 | return out |
1329 | elif isinstance(arg,escript.Data): |
1330 | return arg._whereZero(tol) |
1331 | elif isinstance(arg,float): |
1332 | if abs(arg)<=tol: |
1333 | return 1. |
1334 | else: |
1335 | return 0. |
1336 | elif isinstance(arg,int): |
1337 | if abs(float(arg))<=tol: |
1338 | return 1. |
1339 | else: |
1340 | return 0. |
1341 | elif isinstance(arg,Symbol): |
1342 | return WhereZero_Symbol(arg,tol) |
1343 | else: |
1344 | raise TypeError,"whereZero: Unknown argument type." |
1345 | |
1346 | class WhereZero_Symbol(DependendSymbol): |
1347 | """ |
1348 | L{Symbol} representing the result of the mask of zero entries function |
1349 | """ |
1350 | def __init__(self,arg,tol=0.): |
1351 | """ |
1352 | initialization of whereZero L{Symbol} with argument arg |
1353 | @param arg: argument of function |
1354 | @type arg: typically L{Symbol}. |
1355 | """ |
1356 | DependendSymbol.__init__(self,args=[arg,tol],shape=arg.getShape(),dim=arg.getDim()) |
1357 | |
1358 | def getMyCode(self,argstrs,format="escript"): |
1359 | """ |
1360 | returns a program code that can be used to evaluate the symbol. |
1361 | |
1362 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1363 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1364 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1365 | @type format: C{str} |
1366 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1367 | @rtype: C{str} |
1368 | @raise NotImplementedError: if the requested format is not available |
1369 | """ |
1370 | if format=="escript" or format=="str" or format=="text": |
1371 | return "whereZero(%s,tol=%s)"%(argstrs[0],argstrs[1]) |
1372 | else: |
1373 | raise NotImplementedError,"WhereZero_Symbol does not provide program code for format %s."%format |
1374 | |
1375 | def substitute(self,argvals): |
1376 | """ |
1377 | assigns new values to symbols in the definition of the symbol. |
1378 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1379 | |
1380 | @param argvals: new values assigned to symbols |
1381 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1382 | @return: result of the substitution process. Operations are executed as much as possible. |
1383 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1384 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1385 | """ |
1386 | if argvals.has_key(self): |
1387 | arg=argvals[self] |
1388 | if self.isAppropriateValue(arg): |
1389 | return arg |
1390 | else: |
1391 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1392 | else: |
1393 | arg=self.getSubstitutedArguments(argvals) |
1394 | return whereZero(arg[0],arg[1]) |
1395 | |
1396 | def whereNonZero(arg,tol=0.): |
1397 | """ |
1398 | returns mask of values different from zero of argument arg |
1399 | |
1400 | @param arg: argument |
1401 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1402 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1403 | @raises TypeError: if the type of the argument is not expected. |
1404 | """ |
1405 | if isinstance(arg,numarray.NumArray): |
1406 | out=numarray.greater(abs(arg)-tol,numarray.zeros(arg.shape,numarray.Float64))*1. |
1407 | if isinstance(out,float): out=numarray.array(out,type=numarray.Float64) |
1408 | return out |
1409 | elif isinstance(arg,escript.Data): |
1410 | return arg._whereNonZero(tol) |
1411 | elif isinstance(arg,float): |
1412 | if abs(arg)>tol: |
1413 | return 1. |
1414 | else: |
1415 | return 0. |
1416 | elif isinstance(arg,int): |
1417 | if abs(float(arg))>tol: |
1418 | return 1. |
1419 | else: |
1420 | return 0. |
1421 | elif isinstance(arg,Symbol): |
1422 | return 1.-whereZero(arg,tol) |
1423 | else: |
1424 | raise TypeError,"whereNonZero: Unknown argument type." |
1425 | |
1426 | def erf(arg): |
1427 | """ |
1428 | returns erf of argument arg |
1429 | |
1430 | @param arg: argument |
1431 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1432 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1433 | @raises TypeError: if the type of the argument is not expected. |
1434 | """ |
1435 | if isinstance(arg,escript.Data): |
1436 | return arg._erf() |
1437 | else: |
1438 | raise TypeError,"erf: Unknown argument type." |
1439 | |
1440 | def sin(arg): |
1441 | """ |
1442 | returns sine of argument arg |
1443 | |
1444 | @param arg: argument |
1445 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1446 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1447 | @raises TypeError: if the type of the argument is not expected. |
1448 | """ |
1449 | if isinstance(arg,numarray.NumArray): |
1450 | return numarray.sin(arg) |
1451 | elif isinstance(arg,escript.Data): |
1452 | return arg._sin() |
1453 | elif isinstance(arg,float): |
1454 | return math.sin(arg) |
1455 | elif isinstance(arg,int): |
1456 | return math.sin(arg) |
1457 | elif isinstance(arg,Symbol): |
1458 | return Sin_Symbol(arg) |
1459 | else: |
1460 | raise TypeError,"sin: Unknown argument type." |
1461 | |
1462 | class Sin_Symbol(DependendSymbol): |
1463 | """ |
1464 | L{Symbol} representing the result of the sine function |
1465 | """ |
1466 | def __init__(self,arg): |
1467 | """ |
1468 | initialization of sin L{Symbol} with argument arg |
1469 | @param arg: argument of function |
1470 | @type arg: typically L{Symbol}. |
1471 | """ |
1472 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1473 | |
1474 | def getMyCode(self,argstrs,format="escript"): |
1475 | """ |
1476 | returns a program code that can be used to evaluate the symbol. |
1477 | |
1478 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1479 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1480 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1481 | @type format: C{str} |
1482 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1483 | @rtype: C{str} |
1484 | @raise NotImplementedError: if the requested format is not available |
1485 | """ |
1486 | if isinstance(argstrs,list): |
1487 | argstrs=argstrs[0] |
1488 | if format=="escript" or format=="str" or format=="text": |
1489 | return "sin(%s)"%argstrs |
1490 | else: |
1491 | raise NotImplementedError,"Sin_Symbol does not provide program code for format %s."%format |
1492 | |
1493 | def substitute(self,argvals): |
1494 | """ |
1495 | assigns new values to symbols in the definition of the symbol. |
1496 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1497 | |
1498 | @param argvals: new values assigned to symbols |
1499 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1500 | @return: result of the substitution process. Operations are executed as much as possible. |
1501 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1502 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1503 | """ |
1504 | if argvals.has_key(self): |
1505 | arg=argvals[self] |
1506 | if self.isAppropriateValue(arg): |
1507 | return arg |
1508 | else: |
1509 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1510 | else: |
1511 | arg=self.getSubstitutedArguments(argvals)[0] |
1512 | return sin(arg) |
1513 | |
1514 | def diff(self,arg): |
1515 | """ |
1516 | differential of this object |
1517 | |
1518 | @param arg: the derivative is calculated with respect to arg |
1519 | @type arg: L{escript.Symbol} |
1520 | @return: derivative with respect to C{arg} |
1521 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1522 | """ |
1523 | if arg==self: |
1524 | return identity(self.getShape()) |
1525 | else: |
1526 | myarg=self.getArgument()[0] |
1527 | val=matchShape(cos(myarg),self.getDifferentiatedArguments(arg)[0]) |
1528 | return val[0]*val[1] |
1529 | |
1530 | def cos(arg): |
1531 | """ |
1532 | returns cosine of argument arg |
1533 | |
1534 | @param arg: argument |
1535 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1536 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1537 | @raises TypeError: if the type of the argument is not expected. |
1538 | """ |
1539 | if isinstance(arg,numarray.NumArray): |
1540 | return numarray.cos(arg) |
1541 | elif isinstance(arg,escript.Data): |
1542 | return arg._cos() |
1543 | elif isinstance(arg,float): |
1544 | return math.cos(arg) |
1545 | elif isinstance(arg,int): |
1546 | return math.cos(arg) |
1547 | elif isinstance(arg,Symbol): |
1548 | return Cos_Symbol(arg) |
1549 | else: |
1550 | raise TypeError,"cos: Unknown argument type." |
1551 | |
1552 | class Cos_Symbol(DependendSymbol): |
1553 | """ |
1554 | L{Symbol} representing the result of the cosine function |
1555 | """ |
1556 | def __init__(self,arg): |
1557 | """ |
1558 | initialization of cos L{Symbol} with argument arg |
1559 | @param arg: argument of function |
1560 | @type arg: typically L{Symbol}. |
1561 | """ |
1562 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1563 | |
1564 | def getMyCode(self,argstrs,format="escript"): |
1565 | """ |
1566 | returns a program code that can be used to evaluate the symbol. |
1567 | |
1568 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1569 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1570 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1571 | @type format: C{str} |
1572 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1573 | @rtype: C{str} |
1574 | @raise NotImplementedError: if the requested format is not available |
1575 | """ |
1576 | if isinstance(argstrs,list): |
1577 | argstrs=argstrs[0] |
1578 | if format=="escript" or format=="str" or format=="text": |
1579 | return "cos(%s)"%argstrs |
1580 | else: |
1581 | raise NotImplementedError,"Cos_Symbol does not provide program code for format %s."%format |
1582 | |
1583 | def substitute(self,argvals): |
1584 | """ |
1585 | assigns new values to symbols in the definition of the symbol. |
1586 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1587 | |
1588 | @param argvals: new values assigned to symbols |
1589 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1590 | @return: result of the substitution process. Operations are executed as much as possible. |
1591 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1592 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1593 | """ |
1594 | if argvals.has_key(self): |
1595 | arg=argvals[self] |
1596 | if self.isAppropriateValue(arg): |
1597 | return arg |
1598 | else: |
1599 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1600 | else: |
1601 | arg=self.getSubstitutedArguments(argvals)[0] |
1602 | return cos(arg) |
1603 | |
1604 | def diff(self,arg): |
1605 | """ |
1606 | differential of this object |
1607 | |
1608 | @param arg: the derivative is calculated with respect to arg |
1609 | @type arg: L{escript.Symbol} |
1610 | @return: derivative with respect to C{arg} |
1611 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1612 | """ |
1613 | if arg==self: |
1614 | return identity(self.getShape()) |
1615 | else: |
1616 | myarg=self.getArgument()[0] |
1617 | val=matchShape(-sin(myarg),self.getDifferentiatedArguments(arg)[0]) |
1618 | return val[0]*val[1] |
1619 | |
1620 | def tan(arg): |
1621 | """ |
1622 | returns tangent of argument arg |
1623 | |
1624 | @param arg: argument |
1625 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1626 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1627 | @raises TypeError: if the type of the argument is not expected. |
1628 | """ |
1629 | if isinstance(arg,numarray.NumArray): |
1630 | return numarray.tan(arg) |
1631 | elif isinstance(arg,escript.Data): |
1632 | return arg._tan() |
1633 | elif isinstance(arg,float): |
1634 | return math.tan(arg) |
1635 | elif isinstance(arg,int): |
1636 | return math.tan(arg) |
1637 | elif isinstance(arg,Symbol): |
1638 | return Tan_Symbol(arg) |
1639 | else: |
1640 | raise TypeError,"tan: Unknown argument type." |
1641 | |
1642 | class Tan_Symbol(DependendSymbol): |
1643 | """ |
1644 | L{Symbol} representing the result of the tangent function |
1645 | """ |
1646 | def __init__(self,arg): |
1647 | """ |
1648 | initialization of tan L{Symbol} with argument arg |
1649 | @param arg: argument of function |
1650 | @type arg: typically L{Symbol}. |
1651 | """ |
1652 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1653 | |
1654 | def getMyCode(self,argstrs,format="escript"): |
1655 | """ |
1656 | returns a program code that can be used to evaluate the symbol. |
1657 | |
1658 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1659 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1660 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1661 | @type format: C{str} |
1662 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1663 | @rtype: C{str} |
1664 | @raise NotImplementedError: if the requested format is not available |
1665 | """ |
1666 | if isinstance(argstrs,list): |
1667 | argstrs=argstrs[0] |
1668 | if format=="escript" or format=="str" or format=="text": |
1669 | return "tan(%s)"%argstrs |
1670 | else: |
1671 | raise NotImplementedError,"Tan_Symbol does not provide program code for format %s."%format |
1672 | |
1673 | def substitute(self,argvals): |
1674 | """ |
1675 | assigns new values to symbols in the definition of the symbol. |
1676 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1677 | |
1678 | @param argvals: new values assigned to symbols |
1679 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1680 | @return: result of the substitution process. Operations are executed as much as possible. |
1681 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1682 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1683 | """ |
1684 | if argvals.has_key(self): |
1685 | arg=argvals[self] |
1686 | if self.isAppropriateValue(arg): |
1687 | return arg |
1688 | else: |
1689 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1690 | else: |
1691 | arg=self.getSubstitutedArguments(argvals)[0] |
1692 | return tan(arg) |
1693 | |
1694 | def diff(self,arg): |
1695 | """ |
1696 | differential of this object |
1697 | |
1698 | @param arg: the derivative is calculated with respect to arg |
1699 | @type arg: L{escript.Symbol} |
1700 | @return: derivative with respect to C{arg} |
1701 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1702 | """ |
1703 | if arg==self: |
1704 | return identity(self.getShape()) |
1705 | else: |
1706 | myarg=self.getArgument()[0] |
1707 | val=matchShape(1./cos(myarg)**2,self.getDifferentiatedArguments(arg)[0]) |
1708 | return val[0]*val[1] |
1709 | |
1710 | def asin(arg): |
1711 | """ |
1712 | returns inverse sine of argument arg |
1713 | |
1714 | @param arg: argument |
1715 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1716 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1717 | @raises TypeError: if the type of the argument is not expected. |
1718 | """ |
1719 | if isinstance(arg,numarray.NumArray): |
1720 | return numarray.arcsin(arg) |
1721 | elif isinstance(arg,escript.Data): |
1722 | return arg._asin() |
1723 | elif isinstance(arg,float): |
1724 | return math.asin(arg) |
1725 | elif isinstance(arg,int): |
1726 | return math.asin(arg) |
1727 | elif isinstance(arg,Symbol): |
1728 | return Asin_Symbol(arg) |
1729 | else: |
1730 | raise TypeError,"asin: Unknown argument type." |
1731 | |
1732 | class Asin_Symbol(DependendSymbol): |
1733 | """ |
1734 | L{Symbol} representing the result of the inverse sine function |
1735 | """ |
1736 | def __init__(self,arg): |
1737 | """ |
1738 | initialization of asin L{Symbol} with argument arg |
1739 | @param arg: argument of function |
1740 | @type arg: typically L{Symbol}. |
1741 | """ |
1742 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1743 | |
1744 | def getMyCode(self,argstrs,format="escript"): |
1745 | """ |
1746 | returns a program code that can be used to evaluate the symbol. |
1747 | |
1748 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1749 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1750 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1751 | @type format: C{str} |
1752 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1753 | @rtype: C{str} |
1754 | @raise NotImplementedError: if the requested format is not available |
1755 | """ |
1756 | if isinstance(argstrs,list): |
1757 | argstrs=argstrs[0] |
1758 | if format=="escript" or format=="str" or format=="text": |
1759 | return "asin(%s)"%argstrs |
1760 | else: |
1761 | raise NotImplementedError,"Asin_Symbol does not provide program code for format %s."%format |
1762 | |
1763 | def substitute(self,argvals): |
1764 | """ |
1765 | assigns new values to symbols in the definition of the symbol. |
1766 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1767 | |
1768 | @param argvals: new values assigned to symbols |
1769 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1770 | @return: result of the substitution process. Operations are executed as much as possible. |
1771 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1772 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1773 | """ |
1774 | if argvals.has_key(self): |
1775 | arg=argvals[self] |
1776 | if self.isAppropriateValue(arg): |
1777 | return arg |
1778 | else: |
1779 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1780 | else: |
1781 | arg=self.getSubstitutedArguments(argvals)[0] |
1782 | return asin(arg) |
1783 | |
1784 | def diff(self,arg): |
1785 | """ |
1786 | differential of this object |
1787 | |
1788 | @param arg: the derivative is calculated with respect to arg |
1789 | @type arg: L{escript.Symbol} |
1790 | @return: derivative with respect to C{arg} |
1791 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1792 | """ |
1793 | if arg==self: |
1794 | return identity(self.getShape()) |
1795 | else: |
1796 | myarg=self.getArgument()[0] |
1797 | val=matchShape(1./sqrt(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
1798 | return val[0]*val[1] |
1799 | |
1800 | def acos(arg): |
1801 | """ |
1802 | returns inverse cosine of argument arg |
1803 | |
1804 | @param arg: argument |
1805 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1806 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1807 | @raises TypeError: if the type of the argument is not expected. |
1808 | """ |
1809 | if isinstance(arg,numarray.NumArray): |
1810 | return numarray.arccos(arg) |
1811 | elif isinstance(arg,escript.Data): |
1812 | return arg._acos() |
1813 | elif isinstance(arg,float): |
1814 | return math.acos(arg) |
1815 | elif isinstance(arg,int): |
1816 | return math.acos(arg) |
1817 | elif isinstance(arg,Symbol): |
1818 | return Acos_Symbol(arg) |
1819 | else: |
1820 | raise TypeError,"acos: Unknown argument type." |
1821 | |
1822 | class Acos_Symbol(DependendSymbol): |
1823 | """ |
1824 | L{Symbol} representing the result of the inverse cosine function |
1825 | """ |
1826 | def __init__(self,arg): |
1827 | """ |
1828 | initialization of acos L{Symbol} with argument arg |
1829 | @param arg: argument of function |
1830 | @type arg: typically L{Symbol}. |
1831 | """ |
1832 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1833 | |
1834 | def getMyCode(self,argstrs,format="escript"): |
1835 | """ |
1836 | returns a program code that can be used to evaluate the symbol. |
1837 | |
1838 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1839 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1840 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1841 | @type format: C{str} |
1842 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1843 | @rtype: C{str} |
1844 | @raise NotImplementedError: if the requested format is not available |
1845 | """ |
1846 | if isinstance(argstrs,list): |
1847 | argstrs=argstrs[0] |
1848 | if format=="escript" or format=="str" or format=="text": |
1849 | return "acos(%s)"%argstrs |
1850 | else: |
1851 | raise NotImplementedError,"Acos_Symbol does not provide program code for format %s."%format |
1852 | |
1853 | def substitute(self,argvals): |
1854 | """ |
1855 | assigns new values to symbols in the definition of the symbol. |
1856 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1857 | |
1858 | @param argvals: new values assigned to symbols |
1859 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1860 | @return: result of the substitution process. Operations are executed as much as possible. |
1861 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1862 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1863 | """ |
1864 | if argvals.has_key(self): |
1865 | arg=argvals[self] |
1866 | if self.isAppropriateValue(arg): |
1867 | return arg |
1868 | else: |
1869 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1870 | else: |
1871 | arg=self.getSubstitutedArguments(argvals)[0] |
1872 | return acos(arg) |
1873 | |
1874 | def diff(self,arg): |
1875 | """ |
1876 | differential of this object |
1877 | |
1878 | @param arg: the derivative is calculated with respect to arg |
1879 | @type arg: L{escript.Symbol} |
1880 | @return: derivative with respect to C{arg} |
1881 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1882 | """ |
1883 | if arg==self: |
1884 | return identity(self.getShape()) |
1885 | else: |
1886 | myarg=self.getArgument()[0] |
1887 | val=matchShape(-1./sqrt(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
1888 | return val[0]*val[1] |
1889 | |
1890 | def atan(arg): |
1891 | """ |
1892 | returns inverse tangent of argument arg |
1893 | |
1894 | @param arg: argument |
1895 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1896 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1897 | @raises TypeError: if the type of the argument is not expected. |
1898 | """ |
1899 | if isinstance(arg,numarray.NumArray): |
1900 | return numarray.arctan(arg) |
1901 | elif isinstance(arg,escript.Data): |
1902 | return arg._atan() |
1903 | elif isinstance(arg,float): |
1904 | return math.atan(arg) |
1905 | elif isinstance(arg,int): |
1906 | return math.atan(arg) |
1907 | elif isinstance(arg,Symbol): |
1908 | return Atan_Symbol(arg) |
1909 | else: |
1910 | raise TypeError,"atan: Unknown argument type." |
1911 | |
1912 | class Atan_Symbol(DependendSymbol): |
1913 | """ |
1914 | L{Symbol} representing the result of the inverse tangent function |
1915 | """ |
1916 | def __init__(self,arg): |
1917 | """ |
1918 | initialization of atan L{Symbol} with argument arg |
1919 | @param arg: argument of function |
1920 | @type arg: typically L{Symbol}. |
1921 | """ |
1922 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
1923 | |
1924 | def getMyCode(self,argstrs,format="escript"): |
1925 | """ |
1926 | returns a program code that can be used to evaluate the symbol. |
1927 | |
1928 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
1929 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
1930 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
1931 | @type format: C{str} |
1932 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
1933 | @rtype: C{str} |
1934 | @raise NotImplementedError: if the requested format is not available |
1935 | """ |
1936 | if isinstance(argstrs,list): |
1937 | argstrs=argstrs[0] |
1938 | if format=="escript" or format=="str" or format=="text": |
1939 | return "atan(%s)"%argstrs |
1940 | else: |
1941 | raise NotImplementedError,"Atan_Symbol does not provide program code for format %s."%format |
1942 | |
1943 | def substitute(self,argvals): |
1944 | """ |
1945 | assigns new values to symbols in the definition of the symbol. |
1946 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
1947 | |
1948 | @param argvals: new values assigned to symbols |
1949 | @type argvals: C{dict} with keywords of type L{Symbol}. |
1950 | @return: result of the substitution process. Operations are executed as much as possible. |
1951 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
1952 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
1953 | """ |
1954 | if argvals.has_key(self): |
1955 | arg=argvals[self] |
1956 | if self.isAppropriateValue(arg): |
1957 | return arg |
1958 | else: |
1959 | raise TypeError,"%s: new value is not appropriate."%str(self) |
1960 | else: |
1961 | arg=self.getSubstitutedArguments(argvals)[0] |
1962 | return atan(arg) |
1963 | |
1964 | def diff(self,arg): |
1965 | """ |
1966 | differential of this object |
1967 | |
1968 | @param arg: the derivative is calculated with respect to arg |
1969 | @type arg: L{escript.Symbol} |
1970 | @return: derivative with respect to C{arg} |
1971 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
1972 | """ |
1973 | if arg==self: |
1974 | return identity(self.getShape()) |
1975 | else: |
1976 | myarg=self.getArgument()[0] |
1977 | val=matchShape(1./(1+myarg**2),self.getDifferentiatedArguments(arg)[0]) |
1978 | return val[0]*val[1] |
1979 | |
1980 | def sinh(arg): |
1981 | """ |
1982 | returns hyperbolic sine of argument arg |
1983 | |
1984 | @param arg: argument |
1985 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
1986 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
1987 | @raises TypeError: if the type of the argument is not expected. |
1988 | """ |
1989 | if isinstance(arg,numarray.NumArray): |
1990 | return numarray.sinh(arg) |
1991 | elif isinstance(arg,escript.Data): |
1992 | return arg._sinh() |
1993 | elif isinstance(arg,float): |
1994 | return math.sinh(arg) |
1995 | elif isinstance(arg,int): |
1996 | return math.sinh(arg) |
1997 | elif isinstance(arg,Symbol): |
1998 | return Sinh_Symbol(arg) |
1999 | else: |
2000 | raise TypeError,"sinh: Unknown argument type." |
2001 | |
2002 | class Sinh_Symbol(DependendSymbol): |
2003 | """ |
2004 | L{Symbol} representing the result of the hyperbolic sine function |
2005 | """ |
2006 | def __init__(self,arg): |
2007 | """ |
2008 | initialization of sinh L{Symbol} with argument arg |
2009 | @param arg: argument of function |
2010 | @type arg: typically L{Symbol}. |
2011 | """ |
2012 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2013 | |
2014 | def getMyCode(self,argstrs,format="escript"): |
2015 | """ |
2016 | returns a program code that can be used to evaluate the symbol. |
2017 | |
2018 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2019 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2020 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2021 | @type format: C{str} |
2022 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2023 | @rtype: C{str} |
2024 | @raise NotImplementedError: if the requested format is not available |
2025 | """ |
2026 | if isinstance(argstrs,list): |
2027 | argstrs=argstrs[0] |
2028 | if format=="escript" or format=="str" or format=="text": |
2029 | return "sinh(%s)"%argstrs |
2030 | else: |
2031 | raise NotImplementedError,"Sinh_Symbol does not provide program code for format %s."%format |
2032 | |
2033 | def substitute(self,argvals): |
2034 | """ |
2035 | assigns new values to symbols in the definition of the symbol. |
2036 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2037 | |
2038 | @param argvals: new values assigned to symbols |
2039 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2040 | @return: result of the substitution process. Operations are executed as much as possible. |
2041 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2042 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2043 | """ |
2044 | if argvals.has_key(self): |
2045 | arg=argvals[self] |
2046 | if self.isAppropriateValue(arg): |
2047 | return arg |
2048 | else: |
2049 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2050 | else: |
2051 | arg=self.getSubstitutedArguments(argvals)[0] |
2052 | return sinh(arg) |
2053 | |
2054 | def diff(self,arg): |
2055 | """ |
2056 | differential of this object |
2057 | |
2058 | @param arg: the derivative is calculated with respect to arg |
2059 | @type arg: L{escript.Symbol} |
2060 | @return: derivative with respect to C{arg} |
2061 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2062 | """ |
2063 | if arg==self: |
2064 | return identity(self.getShape()) |
2065 | else: |
2066 | myarg=self.getArgument()[0] |
2067 | val=matchShape(cosh(myarg),self.getDifferentiatedArguments(arg)[0]) |
2068 | return val[0]*val[1] |
2069 | |
2070 | def cosh(arg): |
2071 | """ |
2072 | returns hyperbolic cosine of argument arg |
2073 | |
2074 | @param arg: argument |
2075 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2076 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2077 | @raises TypeError: if the type of the argument is not expected. |
2078 | """ |
2079 | if isinstance(arg,numarray.NumArray): |
2080 | return numarray.cosh(arg) |
2081 | elif isinstance(arg,escript.Data): |
2082 | return arg._cosh() |
2083 | elif isinstance(arg,float): |
2084 | return math.cosh(arg) |
2085 | elif isinstance(arg,int): |
2086 | return math.cosh(arg) |
2087 | elif isinstance(arg,Symbol): |
2088 | return Cosh_Symbol(arg) |
2089 | else: |
2090 | raise TypeError,"cosh: Unknown argument type." |
2091 | |
2092 | class Cosh_Symbol(DependendSymbol): |
2093 | """ |
2094 | L{Symbol} representing the result of the hyperbolic cosine function |
2095 | """ |
2096 | def __init__(self,arg): |
2097 | """ |
2098 | initialization of cosh L{Symbol} with argument arg |
2099 | @param arg: argument of function |
2100 | @type arg: typically L{Symbol}. |
2101 | """ |
2102 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2103 | |
2104 | def getMyCode(self,argstrs,format="escript"): |
2105 | """ |
2106 | returns a program code that can be used to evaluate the symbol. |
2107 | |
2108 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2109 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2110 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2111 | @type format: C{str} |
2112 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2113 | @rtype: C{str} |
2114 | @raise NotImplementedError: if the requested format is not available |
2115 | """ |
2116 | if isinstance(argstrs,list): |
2117 | argstrs=argstrs[0] |
2118 | if format=="escript" or format=="str" or format=="text": |
2119 | return "cosh(%s)"%argstrs |
2120 | else: |
2121 | raise NotImplementedError,"Cosh_Symbol does not provide program code for format %s."%format |
2122 | |
2123 | def substitute(self,argvals): |
2124 | """ |
2125 | assigns new values to symbols in the definition of the symbol. |
2126 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2127 | |
2128 | @param argvals: new values assigned to symbols |
2129 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2130 | @return: result of the substitution process. Operations are executed as much as possible. |
2131 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2132 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2133 | """ |
2134 | if argvals.has_key(self): |
2135 | arg=argvals[self] |
2136 | if self.isAppropriateValue(arg): |
2137 | return arg |
2138 | else: |
2139 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2140 | else: |
2141 | arg=self.getSubstitutedArguments(argvals)[0] |
2142 | return cosh(arg) |
2143 | |
2144 | def diff(self,arg): |
2145 | """ |
2146 | differential of this object |
2147 | |
2148 | @param arg: the derivative is calculated with respect to arg |
2149 | @type arg: L{escript.Symbol} |
2150 | @return: derivative with respect to C{arg} |
2151 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2152 | """ |
2153 | if arg==self: |
2154 | return identity(self.getShape()) |
2155 | else: |
2156 | myarg=self.getArgument()[0] |
2157 | val=matchShape(sinh(myarg),self.getDifferentiatedArguments(arg)[0]) |
2158 | return val[0]*val[1] |
2159 | |
2160 | def tanh(arg): |
2161 | """ |
2162 | returns hyperbolic tangent of argument arg |
2163 | |
2164 | @param arg: argument |
2165 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2166 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2167 | @raises TypeError: if the type of the argument is not expected. |
2168 | """ |
2169 | if isinstance(arg,numarray.NumArray): |
2170 | return numarray.tanh(arg) |
2171 | elif isinstance(arg,escript.Data): |
2172 | return arg._tanh() |
2173 | elif isinstance(arg,float): |
2174 | return math.tanh(arg) |
2175 | elif isinstance(arg,int): |
2176 | return math.tanh(arg) |
2177 | elif isinstance(arg,Symbol): |
2178 | return Tanh_Symbol(arg) |
2179 | else: |
2180 | raise TypeError,"tanh: Unknown argument type." |
2181 | |
2182 | class Tanh_Symbol(DependendSymbol): |
2183 | """ |
2184 | L{Symbol} representing the result of the hyperbolic tangent function |
2185 | """ |
2186 | def __init__(self,arg): |
2187 | """ |
2188 | initialization of tanh L{Symbol} with argument arg |
2189 | @param arg: argument of function |
2190 | @type arg: typically L{Symbol}. |
2191 | """ |
2192 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2193 | |
2194 | def getMyCode(self,argstrs,format="escript"): |
2195 | """ |
2196 | returns a program code that can be used to evaluate the symbol. |
2197 | |
2198 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2199 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2200 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2201 | @type format: C{str} |
2202 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2203 | @rtype: C{str} |
2204 | @raise NotImplementedError: if the requested format is not available |
2205 | """ |
2206 | if isinstance(argstrs,list): |
2207 | argstrs=argstrs[0] |
2208 | if format=="escript" or format=="str" or format=="text": |
2209 | return "tanh(%s)"%argstrs |
2210 | else: |
2211 | raise NotImplementedError,"Tanh_Symbol does not provide program code for format %s."%format |
2212 | |
2213 | def substitute(self,argvals): |
2214 | """ |
2215 | assigns new values to symbols in the definition of the symbol. |
2216 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2217 | |
2218 | @param argvals: new values assigned to symbols |
2219 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2220 | @return: result of the substitution process. Operations are executed as much as possible. |
2221 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2222 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2223 | """ |
2224 | if argvals.has_key(self): |
2225 | arg=argvals[self] |
2226 | if self.isAppropriateValue(arg): |
2227 | return arg |
2228 | else: |
2229 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2230 | else: |
2231 | arg=self.getSubstitutedArguments(argvals)[0] |
2232 | return tanh(arg) |
2233 | |
2234 | def diff(self,arg): |
2235 | """ |
2236 | differential of this object |
2237 | |
2238 | @param arg: the derivative is calculated with respect to arg |
2239 | @type arg: L{escript.Symbol} |
2240 | @return: derivative with respect to C{arg} |
2241 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2242 | """ |
2243 | if arg==self: |
2244 | return identity(self.getShape()) |
2245 | else: |
2246 | myarg=self.getArgument()[0] |
2247 | val=matchShape(1./cosh(myarg)**2,self.getDifferentiatedArguments(arg)[0]) |
2248 | return val[0]*val[1] |
2249 | |
2250 | def asinh(arg): |
2251 | """ |
2252 | returns inverse hyperbolic sine of argument arg |
2253 | |
2254 | @param arg: argument |
2255 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2256 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2257 | @raises TypeError: if the type of the argument is not expected. |
2258 | """ |
2259 | if isinstance(arg,numarray.NumArray): |
2260 | return numarray.arcsinh(arg) |
2261 | elif isinstance(arg,escript.Data): |
2262 | return arg._asinh() |
2263 | elif isinstance(arg,float): |
2264 | return numarray.arcsinh(arg) |
2265 | elif isinstance(arg,int): |
2266 | return numarray.arcsinh(float(arg)) |
2267 | elif isinstance(arg,Symbol): |
2268 | return Asinh_Symbol(arg) |
2269 | else: |
2270 | raise TypeError,"asinh: Unknown argument type." |
2271 | |
2272 | class Asinh_Symbol(DependendSymbol): |
2273 | """ |
2274 | L{Symbol} representing the result of the inverse hyperbolic sine function |
2275 | """ |
2276 | def __init__(self,arg): |
2277 | """ |
2278 | initialization of asinh L{Symbol} with argument arg |
2279 | @param arg: argument of function |
2280 | @type arg: typically L{Symbol}. |
2281 | """ |
2282 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2283 | |
2284 | def getMyCode(self,argstrs,format="escript"): |
2285 | """ |
2286 | returns a program code that can be used to evaluate the symbol. |
2287 | |
2288 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2289 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2290 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2291 | @type format: C{str} |
2292 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2293 | @rtype: C{str} |
2294 | @raise NotImplementedError: if the requested format is not available |
2295 | """ |
2296 | if isinstance(argstrs,list): |
2297 | argstrs=argstrs[0] |
2298 | if format=="escript" or format=="str" or format=="text": |
2299 | return "asinh(%s)"%argstrs |
2300 | else: |
2301 | raise NotImplementedError,"Asinh_Symbol does not provide program code for format %s."%format |
2302 | |
2303 | def substitute(self,argvals): |
2304 | """ |
2305 | assigns new values to symbols in the definition of the symbol. |
2306 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2307 | |
2308 | @param argvals: new values assigned to symbols |
2309 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2310 | @return: result of the substitution process. Operations are executed as much as possible. |
2311 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2312 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2313 | """ |
2314 | if argvals.has_key(self): |
2315 | arg=argvals[self] |
2316 | if self.isAppropriateValue(arg): |
2317 | return arg |
2318 | else: |
2319 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2320 | else: |
2321 | arg=self.getSubstitutedArguments(argvals)[0] |
2322 | return asinh(arg) |
2323 | |
2324 | def diff(self,arg): |
2325 | """ |
2326 | differential of this object |
2327 | |
2328 | @param arg: the derivative is calculated with respect to arg |
2329 | @type arg: L{escript.Symbol} |
2330 | @return: derivative with respect to C{arg} |
2331 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2332 | """ |
2333 | if arg==self: |
2334 | return identity(self.getShape()) |
2335 | else: |
2336 | myarg=self.getArgument()[0] |
2337 | val=matchShape(1./sqrt(myarg**2+1),self.getDifferentiatedArguments(arg)[0]) |
2338 | return val[0]*val[1] |
2339 | |
2340 | def acosh(arg): |
2341 | """ |
2342 | returns inverse hyperolic cosine of argument arg |
2343 | |
2344 | @param arg: argument |
2345 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2346 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2347 | @raises TypeError: if the type of the argument is not expected. |
2348 | """ |
2349 | if isinstance(arg,numarray.NumArray): |
2350 | return numarray.arccosh(arg) |
2351 | elif isinstance(arg,escript.Data): |
2352 | return arg._acosh() |
2353 | elif isinstance(arg,float): |
2354 | return numarray.arccosh(arg) |
2355 | elif isinstance(arg,int): |
2356 | return numarray.arccosh(float(arg)) |
2357 | elif isinstance(arg,Symbol): |
2358 | return Acosh_Symbol(arg) |
2359 | else: |
2360 | raise TypeError,"acosh: Unknown argument type." |
2361 | |
2362 | class Acosh_Symbol(DependendSymbol): |
2363 | """ |
2364 | L{Symbol} representing the result of the inverse hyperolic cosine function |
2365 | """ |
2366 | def __init__(self,arg): |
2367 | """ |
2368 | initialization of acosh L{Symbol} with argument arg |
2369 | @param arg: argument of function |
2370 | @type arg: typically L{Symbol}. |
2371 | """ |
2372 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2373 | |
2374 | def getMyCode(self,argstrs,format="escript"): |
2375 | """ |
2376 | returns a program code that can be used to evaluate the symbol. |
2377 | |
2378 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2379 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2380 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2381 | @type format: C{str} |
2382 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2383 | @rtype: C{str} |
2384 | @raise NotImplementedError: if the requested format is not available |
2385 | """ |
2386 | if isinstance(argstrs,list): |
2387 | argstrs=argstrs[0] |
2388 | if format=="escript" or format=="str" or format=="text": |
2389 | return "acosh(%s)"%argstrs |
2390 | else: |
2391 | raise NotImplementedError,"Acosh_Symbol does not provide program code for format %s."%format |
2392 | |
2393 | def substitute(self,argvals): |
2394 | """ |
2395 | assigns new values to symbols in the definition of the symbol. |
2396 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2397 | |
2398 | @param argvals: new values assigned to symbols |
2399 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2400 | @return: result of the substitution process. Operations are executed as much as possible. |
2401 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2402 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2403 | """ |
2404 | if argvals.has_key(self): |
2405 | arg=argvals[self] |
2406 | if self.isAppropriateValue(arg): |
2407 | return arg |
2408 | else: |
2409 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2410 | else: |
2411 | arg=self.getSubstitutedArguments(argvals)[0] |
2412 | return acosh(arg) |
2413 | |
2414 | def diff(self,arg): |
2415 | """ |
2416 | differential of this object |
2417 | |
2418 | @param arg: the derivative is calculated with respect to arg |
2419 | @type arg: L{escript.Symbol} |
2420 | @return: derivative with respect to C{arg} |
2421 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2422 | """ |
2423 | if arg==self: |
2424 | return identity(self.getShape()) |
2425 | else: |
2426 | myarg=self.getArgument()[0] |
2427 | val=matchShape(1./sqrt(myarg**2-1),self.getDifferentiatedArguments(arg)[0]) |
2428 | return val[0]*val[1] |
2429 | |
2430 | def atanh(arg): |
2431 | """ |
2432 | returns inverse hyperbolic tangent of argument arg |
2433 | |
2434 | @param arg: argument |
2435 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2436 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2437 | @raises TypeError: if the type of the argument is not expected. |
2438 | """ |
2439 | if isinstance(arg,numarray.NumArray): |
2440 | return numarray.arctanh(arg) |
2441 | elif isinstance(arg,escript.Data): |
2442 | return arg._atanh() |
2443 | elif isinstance(arg,float): |
2444 | return numarray.arctanh(arg) |
2445 | elif isinstance(arg,int): |
2446 | return numarray.arctanh(float(arg)) |
2447 | elif isinstance(arg,Symbol): |
2448 | return Atanh_Symbol(arg) |
2449 | else: |
2450 | raise TypeError,"atanh: Unknown argument type." |
2451 | |
2452 | class Atanh_Symbol(DependendSymbol): |
2453 | """ |
2454 | L{Symbol} representing the result of the inverse hyperbolic tangent function |
2455 | """ |
2456 | def __init__(self,arg): |
2457 | """ |
2458 | initialization of atanh L{Symbol} with argument arg |
2459 | @param arg: argument of function |
2460 | @type arg: typically L{Symbol}. |
2461 | """ |
2462 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2463 | |
2464 | def getMyCode(self,argstrs,format="escript"): |
2465 | """ |
2466 | returns a program code that can be used to evaluate the symbol. |
2467 | |
2468 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2469 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2470 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2471 | @type format: C{str} |
2472 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2473 | @rtype: C{str} |
2474 | @raise NotImplementedError: if the requested format is not available |
2475 | """ |
2476 | if isinstance(argstrs,list): |
2477 | argstrs=argstrs[0] |
2478 | if format=="escript" or format=="str" or format=="text": |
2479 | return "atanh(%s)"%argstrs |
2480 | else: |
2481 | raise NotImplementedError,"Atanh_Symbol does not provide program code for format %s."%format |
2482 | |
2483 | def substitute(self,argvals): |
2484 | """ |
2485 | assigns new values to symbols in the definition of the symbol. |
2486 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2487 | |
2488 | @param argvals: new values assigned to symbols |
2489 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2490 | @return: result of the substitution process. Operations are executed as much as possible. |
2491 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2492 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2493 | """ |
2494 | if argvals.has_key(self): |
2495 | arg=argvals[self] |
2496 | if self.isAppropriateValue(arg): |
2497 | return arg |
2498 | else: |
2499 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2500 | else: |
2501 | arg=self.getSubstitutedArguments(argvals)[0] |
2502 | return atanh(arg) |
2503 | |
2504 | def diff(self,arg): |
2505 | """ |
2506 | differential of this object |
2507 | |
2508 | @param arg: the derivative is calculated with respect to arg |
2509 | @type arg: L{escript.Symbol} |
2510 | @return: derivative with respect to C{arg} |
2511 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2512 | """ |
2513 | if arg==self: |
2514 | return identity(self.getShape()) |
2515 | else: |
2516 | myarg=self.getArgument()[0] |
2517 | val=matchShape(1./(1.-myarg**2),self.getDifferentiatedArguments(arg)[0]) |
2518 | return val[0]*val[1] |
2519 | |
2520 | def exp(arg): |
2521 | """ |
2522 | returns exponential of argument arg |
2523 | |
2524 | @param arg: argument |
2525 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2526 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2527 | @raises TypeError: if the type of the argument is not expected. |
2528 | """ |
2529 | if isinstance(arg,numarray.NumArray): |
2530 | return numarray.exp(arg) |
2531 | elif isinstance(arg,escript.Data): |
2532 | return arg._exp() |
2533 | elif isinstance(arg,float): |
2534 | return math.exp(arg) |
2535 | elif isinstance(arg,int): |
2536 | return math.exp(arg) |
2537 | elif isinstance(arg,Symbol): |
2538 | return Exp_Symbol(arg) |
2539 | else: |
2540 | raise TypeError,"exp: Unknown argument type." |
2541 | |
2542 | class Exp_Symbol(DependendSymbol): |
2543 | """ |
2544 | L{Symbol} representing the result of the exponential function |
2545 | """ |
2546 | def __init__(self,arg): |
2547 | """ |
2548 | initialization of exp L{Symbol} with argument arg |
2549 | @param arg: argument of function |
2550 | @type arg: typically L{Symbol}. |
2551 | """ |
2552 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2553 | |
2554 | def getMyCode(self,argstrs,format="escript"): |
2555 | """ |
2556 | returns a program code that can be used to evaluate the symbol. |
2557 | |
2558 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2559 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2560 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2561 | @type format: C{str} |
2562 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2563 | @rtype: C{str} |
2564 | @raise NotImplementedError: if the requested format is not available |
2565 | """ |
2566 | if isinstance(argstrs,list): |
2567 | argstrs=argstrs[0] |
2568 | if format=="escript" or format=="str" or format=="text": |
2569 | return "exp(%s)"%argstrs |
2570 | else: |
2571 | raise NotImplementedError,"Exp_Symbol does not provide program code for format %s."%format |
2572 | |
2573 | def substitute(self,argvals): |
2574 | """ |
2575 | assigns new values to symbols in the definition of the symbol. |
2576 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2577 | |
2578 | @param argvals: new values assigned to symbols |
2579 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2580 | @return: result of the substitution process. Operations are executed as much as possible. |
2581 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2582 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2583 | """ |
2584 | if argvals.has_key(self): |
2585 | arg=argvals[self] |
2586 | if self.isAppropriateValue(arg): |
2587 | return arg |
2588 | else: |
2589 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2590 | else: |
2591 | arg=self.getSubstitutedArguments(argvals)[0] |
2592 | return exp(arg) |
2593 | |
2594 | def diff(self,arg): |
2595 | """ |
2596 | differential of this object |
2597 | |
2598 | @param arg: the derivative is calculated with respect to arg |
2599 | @type arg: L{escript.Symbol} |
2600 | @return: derivative with respect to C{arg} |
2601 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2602 | """ |
2603 | if arg==self: |
2604 | return identity(self.getShape()) |
2605 | else: |
2606 | myarg=self.getArgument()[0] |
2607 | val=matchShape(self,self.getDifferentiatedArguments(arg)[0]) |
2608 | return val[0]*val[1] |
2609 | |
2610 | def sqrt(arg): |
2611 | """ |
2612 | returns square root of argument arg |
2613 | |
2614 | @param arg: argument |
2615 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2616 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2617 | @raises TypeError: if the type of the argument is not expected. |
2618 | """ |
2619 | if isinstance(arg,numarray.NumArray): |
2620 | return numarray.sqrt(arg) |
2621 | elif isinstance(arg,escript.Data): |
2622 | return arg._sqrt() |
2623 | elif isinstance(arg,float): |
2624 | return math.sqrt(arg) |
2625 | elif isinstance(arg,int): |
2626 | return math.sqrt(arg) |
2627 | elif isinstance(arg,Symbol): |
2628 | return Sqrt_Symbol(arg) |
2629 | else: |
2630 | raise TypeError,"sqrt: Unknown argument type." |
2631 | |
2632 | class Sqrt_Symbol(DependendSymbol): |
2633 | """ |
2634 | L{Symbol} representing the result of the square root function |
2635 | """ |
2636 | def __init__(self,arg): |
2637 | """ |
2638 | initialization of sqrt L{Symbol} with argument arg |
2639 | @param arg: argument of function |
2640 | @type arg: typically L{Symbol}. |
2641 | """ |
2642 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2643 | |
2644 | def getMyCode(self,argstrs,format="escript"): |
2645 | """ |
2646 | returns a program code that can be used to evaluate the symbol. |
2647 | |
2648 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2649 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2650 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2651 | @type format: C{str} |
2652 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2653 | @rtype: C{str} |
2654 | @raise NotImplementedError: if the requested format is not available |
2655 | """ |
2656 | if isinstance(argstrs,list): |
2657 | argstrs=argstrs[0] |
2658 | if format=="escript" or format=="str" or format=="text": |
2659 | return "sqrt(%s)"%argstrs |
2660 | else: |
2661 | raise NotImplementedError,"Sqrt_Symbol does not provide program code for format %s."%format |
2662 | |
2663 | def substitute(self,argvals): |
2664 | """ |
2665 | assigns new values to symbols in the definition of the symbol. |
2666 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2667 | |
2668 | @param argvals: new values assigned to symbols |
2669 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2670 | @return: result of the substitution process. Operations are executed as much as possible. |
2671 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2672 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2673 | """ |
2674 | if argvals.has_key(self): |
2675 | arg=argvals[self] |
2676 | if self.isAppropriateValue(arg): |
2677 | return arg |
2678 | else: |
2679 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2680 | else: |
2681 | arg=self.getSubstitutedArguments(argvals)[0] |
2682 | return sqrt(arg) |
2683 | |
2684 | def diff(self,arg): |
2685 | """ |
2686 | differential of this object |
2687 | |
2688 | @param arg: the derivative is calculated with respect to arg |
2689 | @type arg: L{escript.Symbol} |
2690 | @return: derivative with respect to C{arg} |
2691 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2692 | """ |
2693 | if arg==self: |
2694 | return identity(self.getShape()) |
2695 | else: |
2696 | myarg=self.getArgument()[0] |
2697 | val=matchShape(0.5/self,self.getDifferentiatedArguments(arg)[0]) |
2698 | return val[0]*val[1] |
2699 | |
2700 | def log(arg): |
2701 | """ |
2702 | returns natural logarithm of argument arg |
2703 | |
2704 | @param arg: argument |
2705 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2706 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2707 | @raises TypeError: if the type of the argument is not expected. |
2708 | """ |
2709 | if isinstance(arg,numarray.NumArray): |
2710 | return numarray.log(arg) |
2711 | elif isinstance(arg,escript.Data): |
2712 | return arg._log() |
2713 | elif isinstance(arg,float): |
2714 | return math.log(arg) |
2715 | elif isinstance(arg,int): |
2716 | return math.log(arg) |
2717 | elif isinstance(arg,Symbol): |
2718 | return Log_Symbol(arg) |
2719 | else: |
2720 | raise TypeError,"log: Unknown argument type." |
2721 | |
2722 | class Log_Symbol(DependendSymbol): |
2723 | """ |
2724 | L{Symbol} representing the result of the natural logarithm function |
2725 | """ |
2726 | def __init__(self,arg): |
2727 | """ |
2728 | initialization of log L{Symbol} with argument arg |
2729 | @param arg: argument of function |
2730 | @type arg: typically L{Symbol}. |
2731 | """ |
2732 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2733 | |
2734 | def getMyCode(self,argstrs,format="escript"): |
2735 | """ |
2736 | returns a program code that can be used to evaluate the symbol. |
2737 | |
2738 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2739 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2740 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2741 | @type format: C{str} |
2742 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2743 | @rtype: C{str} |
2744 | @raise NotImplementedError: if the requested format is not available |
2745 | """ |
2746 | if isinstance(argstrs,list): |
2747 | argstrs=argstrs[0] |
2748 | if format=="escript" or format=="str" or format=="text": |
2749 | return "log(%s)"%argstrs |
2750 | else: |
2751 | raise NotImplementedError,"Log_Symbol does not provide program code for format %s."%format |
2752 | |
2753 | def substitute(self,argvals): |
2754 | """ |
2755 | assigns new values to symbols in the definition of the symbol. |
2756 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2757 | |
2758 | @param argvals: new values assigned to symbols |
2759 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2760 | @return: result of the substitution process. Operations are executed as much as possible. |
2761 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2762 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2763 | """ |
2764 | if argvals.has_key(self): |
2765 | arg=argvals[self] |
2766 | if self.isAppropriateValue(arg): |
2767 | return arg |
2768 | else: |
2769 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2770 | else: |
2771 | arg=self.getSubstitutedArguments(argvals)[0] |
2772 | return log(arg) |
2773 | |
2774 | def diff(self,arg): |
2775 | """ |
2776 | differential of this object |
2777 | |
2778 | @param arg: the derivative is calculated with respect to arg |
2779 | @type arg: L{escript.Symbol} |
2780 | @return: derivative with respect to C{arg} |
2781 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2782 | """ |
2783 | if arg==self: |
2784 | return identity(self.getShape()) |
2785 | else: |
2786 | myarg=self.getArgument()[0] |
2787 | val=matchShape(1./arg,self.getDifferentiatedArguments(arg)[0]) |
2788 | return val[0]*val[1] |
2789 | |
2790 | def sign(arg): |
2791 | """ |
2792 | returns sign of argument arg |
2793 | |
2794 | @param arg: argument |
2795 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2796 | @rtype: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
2797 | @raises TypeError: if the type of the argument is not expected. |
2798 | """ |
2799 | if isinstance(arg,numarray.NumArray): |
2800 | return wherePositive(arg)-whereNegative(arg) |
2801 | elif isinstance(arg,escript.Data): |
2802 | return arg._sign() |
2803 | elif isinstance(arg,float): |
2804 | if arg>0: |
2805 | return 1. |
2806 | elif arg<0: |
2807 | return -1. |
2808 | else: |
2809 | return 0. |
2810 | elif isinstance(arg,int): |
2811 | if float(arg)>0: |
2812 | return 1. |
2813 | elif float(arg)<0: |
2814 | return -1. |
2815 | else: |
2816 | return 0. |
2817 | elif isinstance(arg,Symbol): |
2818 | return wherePositive(arg)-whereNegative(arg) |
2819 | else: |
2820 | raise TypeError,"sign: Unknown argument type." |
2821 | |
2822 | class Abs_Symbol(DependendSymbol): |
2823 | """ |
2824 | L{Symbol} representing the result of the absolute value function |
2825 | """ |
2826 | def __init__(self,arg): |
2827 | """ |
2828 | initialization of abs L{Symbol} with argument arg |
2829 | @param arg: argument of function |
2830 | @type arg: typically L{Symbol}. |
2831 | """ |
2832 | DependendSymbol.__init__(self,args=[arg],shape=arg.getShape(),dim=arg.getDim()) |
2833 | |
2834 | def getMyCode(self,argstrs,format="escript"): |
2835 | """ |
2836 | returns a program code that can be used to evaluate the symbol. |
2837 | |
2838 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2839 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2840 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2841 | @type format: C{str} |
2842 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2843 | @rtype: C{str} |
2844 | @raise NotImplementedError: if the requested format is not available |
2845 | """ |
2846 | if isinstance(argstrs,list): |
2847 | argstrs=argstrs[0] |
2848 | if format=="escript" or format=="str" or format=="text": |
2849 | return "abs(%s)"%argstrs |
2850 | else: |
2851 | raise NotImplementedError,"Abs_Symbol does not provide program code for format %s."%format |
2852 | |
2853 | def substitute(self,argvals): |
2854 | """ |
2855 | assigns new values to symbols in the definition of the symbol. |
2856 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2857 | |
2858 | @param argvals: new values assigned to symbols |
2859 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2860 | @return: result of the substitution process. Operations are executed as much as possible. |
2861 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2862 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2863 | """ |
2864 | if argvals.has_key(self): |
2865 | arg=argvals[self] |
2866 | if self.isAppropriateValue(arg): |
2867 | return arg |
2868 | else: |
2869 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2870 | else: |
2871 | arg=self.getSubstitutedArguments(argvals)[0] |
2872 | return abs(arg) |
2873 | |
2874 | def diff(self,arg): |
2875 | """ |
2876 | differential of this object |
2877 | |
2878 | @param arg: the derivative is calculated with respect to arg |
2879 | @type arg: L{escript.Symbol} |
2880 | @return: derivative with respect to C{arg} |
2881 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
2882 | """ |
2883 | if arg==self: |
2884 | return identity(self.getShape()) |
2885 | else: |
2886 | myarg=self.getArgument()[0] |
2887 | val=matchShape(sign(myarg),self.getDifferentiatedArguments(arg)[0]) |
2888 | return val[0]*val[1] |
2889 | |
2890 | def minval(arg): |
2891 | """ |
2892 | returns minimum value over all components of arg at each data point |
2893 | |
2894 | @param arg: argument |
2895 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2896 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of arg. |
2897 | @raises TypeError: if the type of the argument is not expected. |
2898 | """ |
2899 | if isinstance(arg,numarray.NumArray): |
2900 | if arg.rank==0: |
2901 | return float(arg) |
2902 | else: |
2903 | return arg.min() |
2904 | elif isinstance(arg,escript.Data): |
2905 | return arg._minval() |
2906 | elif isinstance(arg,float): |
2907 | return arg |
2908 | elif isinstance(arg,int): |
2909 | return float(arg) |
2910 | elif isinstance(arg,Symbol): |
2911 | return Minval_Symbol(arg) |
2912 | else: |
2913 | raise TypeError,"minval: Unknown argument type." |
2914 | |
2915 | class Minval_Symbol(DependendSymbol): |
2916 | """ |
2917 | L{Symbol} representing the result of the minimum value function |
2918 | """ |
2919 | def __init__(self,arg): |
2920 | """ |
2921 | initialization of minimum value L{Symbol} with argument arg |
2922 | @param arg: argument of function |
2923 | @type arg: typically L{Symbol}. |
2924 | """ |
2925 | DependendSymbol.__init__(self,args=[arg],shape=(),dim=arg.getDim()) |
2926 | |
2927 | def getMyCode(self,argstrs,format="escript"): |
2928 | """ |
2929 | returns a program code that can be used to evaluate the symbol. |
2930 | |
2931 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
2932 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
2933 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
2934 | @type format: C{str} |
2935 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
2936 | @rtype: C{str} |
2937 | @raise NotImplementedError: if the requested format is not available |
2938 | """ |
2939 | if isinstance(argstrs,list): |
2940 | argstrs=argstrs[0] |
2941 | if format=="escript" or format=="str" or format=="text": |
2942 | return "minval(%s)"%argstrs |
2943 | else: |
2944 | raise NotImplementedError,"Minval_Symbol does not provide program code for format %s."%format |
2945 | |
2946 | def substitute(self,argvals): |
2947 | """ |
2948 | assigns new values to symbols in the definition of the symbol. |
2949 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
2950 | |
2951 | @param argvals: new values assigned to symbols |
2952 | @type argvals: C{dict} with keywords of type L{Symbol}. |
2953 | @return: result of the substitution process. Operations are executed as much as possible. |
2954 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
2955 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
2956 | """ |
2957 | if argvals.has_key(self): |
2958 | arg=argvals[self] |
2959 | if self.isAppropriateValue(arg): |
2960 | return arg |
2961 | else: |
2962 | raise TypeError,"%s: new value is not appropriate."%str(self) |
2963 | else: |
2964 | arg=self.getSubstitutedArguments(argvals)[0] |
2965 | return minval(arg) |
2966 | |
2967 | def maxval(arg): |
2968 | """ |
2969 | returns maximum value over all components of arg at each data point |
2970 | |
2971 | @param arg: argument |
2972 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
2973 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of arg. |
2974 | @raises TypeError: if the type of the argument is not expected. |
2975 | """ |
2976 | if isinstance(arg,numarray.NumArray): |
2977 | if arg.rank==0: |
2978 | return float(arg) |
2979 | else: |
2980 | return arg.max() |
2981 | elif isinstance(arg,escript.Data): |
2982 | return arg._maxval() |
2983 | elif isinstance(arg,float): |
2984 | return arg |
2985 | elif isinstance(arg,int): |
2986 | return float(arg) |
2987 | elif isinstance(arg,Symbol): |
2988 | return Maxval_Symbol(arg) |
2989 | else: |
2990 | raise TypeError,"maxval: Unknown argument type." |
2991 | |
2992 | class Maxval_Symbol(DependendSymbol): |
2993 | """ |
2994 | L{Symbol} representing the result of the maximum value function |
2995 | """ |
2996 | def __init__(self,arg): |
2997 | """ |
2998 | initialization of maximum value L{Symbol} with argument arg |
2999 | @param arg: argument of function |
3000 | @type arg: typically L{Symbol}. |
3001 | """ |
3002 | DependendSymbol.__init__(self,args=[arg],shape=(),dim=arg.getDim()) |
3003 | |
3004 | def getMyCode(self,argstrs,format="escript"): |
3005 | """ |
3006 | returns a program code that can be used to evaluate the symbol. |
3007 | |
3008 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
3009 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
3010 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
3011 | @type format: C{str} |
3012 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
3013 | @rtype: C{str} |
3014 | @raise NotImplementedError: if the requested format is not available |
3015 | """ |
3016 | if isinstance(argstrs,list): |
3017 | argstrs=argstrs[0] |
3018 | if format=="escript" or format=="str" or format=="text": |
3019 | return "maxval(%s)"%argstrs |
3020 | else: |
3021 | raise NotImplementedError,"Maxval_Symbol does not provide program code for format %s."%format |
3022 | |
3023 | def substitute(self,argvals): |
3024 | """ |
3025 | assigns new values to symbols in the definition of the symbol. |
3026 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
3027 | |
3028 | @param argvals: new values assigned to symbols |
3029 | @type argvals: C{dict} with keywords of type L{Symbol}. |
3030 | @return: result of the substitution process. Operations are executed as much as possible. |
3031 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
3032 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
3033 | """ |
3034 | if argvals.has_key(self): |
3035 | arg=argvals[self] |
3036 | if self.isAppropriateValue(arg): |
3037 | return arg |
3038 | else: |
3039 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3040 | else: |
3041 | arg=self.getSubstitutedArguments(argvals)[0] |
3042 | return maxval(arg) |
3043 | |
3044 | def length(arg): |
3045 | """ |
3046 | returns length/Euclidean norm of argument arg at each data point |
3047 | |
3048 | @param arg: argument |
3049 | @type arg: C{float}, L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
3050 | @rtype: C{float}, L{escript.Data}, L{Symbol} depending on the type of arg. |
3051 | """ |
3052 | return sqrt(inner(arg,arg)) |
3053 | |
3054 | def trace(arg,axis_offset=0): |
3055 | """ |
3056 | returns the trace of arg which the sum of arg[k,k] over k. |
3057 | |
3058 | @param arg: argument |
3059 | @type arg: L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
3060 | @param axis_offset: C{axis_offset} to components to sum over. C{axis_offset} must be non-negative and less than the rank of arg +1. The dimensions on component |
3061 | C{axis_offset} and axis_offset+1 must be equal. |
3062 | @type axis_offset: C{int} |
3063 | @return: trace of arg. The rank of the returned object is minus 2 of the rank of arg. |
3064 | @rtype: L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
3065 | """ |
3066 | if isinstance(arg,numarray.NumArray): |
3067 | sh=arg.shape |
3068 | if len(sh)<2: |
3069 | raise ValueError,"rank of argument must be greater than 1" |
3070 | if axis_offset<0 or axis_offset>len(sh)-2: |
3071 | raise ValueError,"axis_offset must be between 0 and %s"%len(sh)-2 |
3072 | s1=1 |
3073 | for i in range(axis_offset): s1*=sh[i] |
3074 | s2=1 |
3075 | for i in range(axis_offset+2,len(sh)): s2*=sh[i] |
3076 | if not sh[axis_offset] == sh[axis_offset+1]: |
3077 | raise ValueError,"dimensions of component %s and %s must match."%(axis_offset.axis_offset+1) |
3078 | arg_reshaped=numarray.reshape(arg,(s1,sh[axis_offset],sh[axis_offset],s2)) |
3079 | out=numarray.zeros([s1,s2],numarray.Float64) |
3080 | for i1 in range(s1): |
3081 | for i2 in range(s2): |
3082 | for j in range(sh[axis_offset]): out[i1,i2]+=arg_reshaped[i1,j,j,i2] |
3083 | out.resize(sh[:axis_offset]+sh[axis_offset+2:]) |
3084 | return out |
3085 | elif isinstance(arg,escript.Data): |
3086 | if arg.getRank()<2: |
3087 | raise ValueError,"rank of argument must be greater than 1" |
3088 | if axis_offset<0 or axis_offset>arg.getRank()-2: |
3089 | raise ValueError,"axis_offset must be between 0 and %s"%arg.getRank()-2 |
3090 | s=list(arg.getShape()) |
3091 | if not s[axis_offset] == s[axis_offset+1]: |
3092 | raise ValueError,"dimensions of component %s and %s must match."%(axis_offset.axis_offset+1) |
3093 | return arg._trace(axis_offset) |
3094 | elif isinstance(arg,float): |
3095 | raise TypeError,"illegal argument type float." |
3096 | elif isinstance(arg,int): |
3097 | raise TypeError,"illegal argument type int." |
3098 | elif isinstance(arg,Symbol): |
3099 | return Trace_Symbol(arg,axis_offset) |
3100 | else: |
3101 | raise TypeError,"Unknown argument type." |
3102 | |
3103 | class Trace_Symbol(DependendSymbol): |
3104 | """ |
3105 | L{Symbol} representing the result of the trace function |
3106 | """ |
3107 | def __init__(self,arg,axis_offset=0): |
3108 | """ |
3109 | initialization of trace L{Symbol} with argument arg |
3110 | @param arg: argument of function |
3111 | @type arg: L{Symbol}. |
3112 | @param axis_offset: C{axis_offset} to components to sum over. C{axis_offset} must be non-negative and less than the rank of arg +1. The dimensions on component |
3113 | C{axis_offset} and axis_offset+1 must be equal. |
3114 | @type axis_offset: C{int} |
3115 | """ |
3116 | if arg.getRank()<2: |
3117 | raise ValueError,"rank of argument must be greater than 1" |
3118 | if axis_offset<0 or axis_offset>arg.getRank()-2: |
3119 | raise ValueError,"axis_offset must be between 0 and %s"%arg.getRank()-2 |
3120 | s=list(arg.getShape()) |
3121 | if not s[axis_offset] == s[axis_offset+1]: |
3122 | raise ValueError,"dimensions of component %s and %s must match."%(axis_offset.axis_offset+1) |
3123 | super(Trace_Symbol,self).__init__(args=[arg,axis_offset],shape=tuple(s[0:axis_offset]+s[axis_offset+2:]),dim=arg.getDim()) |
3124 | |
3125 | def getMyCode(self,argstrs,format="escript"): |
3126 | """ |
3127 | returns a program code that can be used to evaluate the symbol. |
3128 | |
3129 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
3130 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
3131 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
3132 | @type format: C{str} |
3133 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
3134 | @rtype: C{str} |
3135 | @raise NotImplementedError: if the requested format is not available |
3136 | """ |
3137 | if format=="escript" or format=="str" or format=="text": |
3138 | return "trace(%s,axis_offset=%s)"%(argstrs[0],argstrs[1]) |
3139 | else: |
3140 | raise NotImplementedError,"Trace_Symbol does not provide program code for format %s."%format |
3141 | |
3142 | def substitute(self,argvals): |
3143 | """ |
3144 | assigns new values to symbols in the definition of the symbol. |
3145 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
3146 | |
3147 | @param argvals: new values assigned to symbols |
3148 | @type argvals: C{dict} with keywords of type L{Symbol}. |
3149 | @return: result of the substitution process. Operations are executed as much as possible. |
3150 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
3151 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
3152 | """ |
3153 | if argvals.has_key(self): |
3154 | arg=argvals[self] |
3155 | if self.isAppropriateValue(arg): |
3156 | return arg |
3157 | else: |
3158 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3159 | else: |
3160 | arg=self.getSubstitutedArguments(argvals) |
3161 | return trace(arg[0],axis_offset=arg[1]) |
3162 | |
3163 | def diff(self,arg): |
3164 | """ |
3165 | differential of this object |
3166 | |
3167 | @param arg: the derivative is calculated with respect to arg |
3168 | @type arg: L{escript.Symbol} |
3169 | @return: derivative with respect to C{arg} |
3170 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
3171 | """ |
3172 | if arg==self: |
3173 | return identity(self.getShape()) |
3174 | else: |
3175 | return trace(self.getDifferentiatedArguments(arg)[0],axis_offset=self.getArgument()[1]) |
3176 | |
3177 | def transpose(arg,axis_offset=None): |
3178 | """ |
3179 | returns the transpose of arg by swaping the first C{axis_offset} and the last rank-axis_offset components. |
3180 | |
3181 | @param arg: argument |
3182 | @type arg: L{escript.Data}, L{Symbol}, L{numarray.NumArray}, C{float}, C{int} |
3183 | @param axis_offset: the first C{axis_offset} components are swapped with rest. If C{axis_offset} must be non-negative and less or equal the rank of arg. |
3184 | if C{axis_offset} is not present C{int(r/2)} where r is the rank of arg is used. |
3185 | @type axis_offset: C{int} |
3186 | @return: transpose of arg |
3187 | @rtype: L{escript.Data}, L{Symbol}, L{numarray.NumArray},C{float}, C{int} depending on the type of arg. |
3188 | """ |
3189 | if isinstance(arg,numarray.NumArray): |
3190 | if axis_offset==None: axis_offset=int(arg.rank/2) |
3191 | return numarray.transpose(arg,axes=range(axis_offset,arg.rank)+range(0,axis_offset)) |
3192 | elif isinstance(arg,escript.Data): |
3193 | r=arg.getRank() |
3194 | if axis_offset==None: axis_offset=int(r/2) |
3195 | if axis_offset<0 or axis_offset>r: |
3196 | raise ValueError,"axis_offset must be between 0 and %s"%r |
3197 | return arg._transpose(axis_offset) |
3198 | elif isinstance(arg,float): |
3199 | if not ( axis_offset==0 or axis_offset==None): |
3200 | raise ValueError,"axis_offset must be 0 for float argument" |
3201 | return arg |
3202 | elif isinstance(arg,int): |
3203 | if not ( axis_offset==0 or axis_offset==None): |
3204 | raise ValueError,"axis_offset must be 0 for int argument" |
3205 | return float(arg) |
3206 | elif isinstance(arg,Symbol): |
3207 | if axis_offset==None: axis_offset=int(arg.getRank()/2) |
3208 | return Transpose_Symbol(arg,axis_offset) |
3209 | else: |
3210 | raise TypeError,"Unknown argument type." |
3211 | |
3212 | class Transpose_Symbol(DependendSymbol): |
3213 | """ |
3214 | L{Symbol} representing the result of the transpose function |
3215 | """ |
3216 | def __init__(self,arg,axis_offset=None): |
3217 | """ |
3218 | initialization of transpose L{Symbol} with argument arg |
3219 | |
3220 | @param arg: argument of function |
3221 | @type arg: L{Symbol}. |
3222 | @param axis_offset: the first C{axis_offset} components are swapped with rest. If C{axis_offset} must be non-negative and less or equal the rank of arg. |
3223 | if C{axis_offset} is not present C{int(r/2)} where r is the rank of arg is used. |
3224 | @type axis_offset: C{int} |
3225 | """ |
3226 | if axis_offset==None: axis_offset=int(arg.getRank()/2) |
3227 | if axis_offset<0 or axis_offset>arg.getRank(): |
3228 | raise ValueError,"axis_offset must be between 0 and %s"%arg.getRank() |
3229 | s=arg.getShape() |
3230 | super(Transpose_Symbol,self).__init__(args=[arg,axis_offset],shape=s[axis_offset:]+s[:axis_offset],dim=arg.getDim()) |
3231 | |
3232 | def getMyCode(self,argstrs,format="escript"): |
3233 | """ |
3234 | returns a program code that can be used to evaluate the symbol. |
3235 | |
3236 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
3237 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
3238 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
3239 | @type format: C{str} |
3240 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
3241 | @rtype: C{str} |
3242 | @raise NotImplementedError: if the requested format is not available |
3243 | """ |
3244 | if format=="escript" or format=="str" or format=="text": |
3245 | return "transpose(%s,axis_offset=%s)"%(argstrs[0],argstrs[1]) |
3246 | else: |
3247 | raise NotImplementedError,"Transpose_Symbol does not provide program code for format %s."%format |
3248 | |
3249 | def substitute(self,argvals): |
3250 | """ |
3251 | assigns new values to symbols in the definition of the symbol. |
3252 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
3253 | |
3254 | @param argvals: new values assigned to symbols |
3255 | @type argvals: C{dict} with keywords of type L{Symbol}. |
3256 | @return: result of the substitution process. Operations are executed as much as possible. |
3257 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
3258 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
3259 | """ |
3260 | if argvals.has_key(self): |
3261 | arg=argvals[self] |
3262 | if self.isAppropriateValue(arg): |
3263 | return arg |
3264 | else: |
3265 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3266 | else: |
3267 | arg=self.getSubstitutedArguments(argvals) |
3268 | return transpose(arg[0],axis_offset=arg[1]) |
3269 | |
3270 | def diff(self,arg): |
3271 | """ |
3272 | differential of this object |
3273 | |
3274 | @param arg: the derivative is calculated with respect to arg |
3275 | @type arg: L{escript.Symbol} |
3276 | @return: derivative with respect to C{arg} |
3277 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
3278 | """ |
3279 | if arg==self: |
3280 | return identity(self.getShape()) |
3281 | else: |
3282 | return transpose(self.getDifferentiatedArguments(arg)[0],axis_offset=self.getArgument()[1]) |
3283 | |
3284 | def swap_axes(arg,axis0=0,axis1=1): |
3285 | """ |
3286 | returns the swap of arg by swaping the components axis0 and axis1 |
3287 | |
3288 | @param arg: argument |
3289 | @type arg: L{escript.Data}, L{Symbol}, L{numarray.NumArray}. |
3290 | @param axis0: axis. C{axis0} must be non-negative and less than the rank of arg. |
3291 | @type axis0: C{int} |
3292 | @param axis1: axis. C{axis1} must be non-negative and less than the rank of arg. |
3293 | @type axis1: C{int} |
3294 | @return: C{arg} with swaped components |
3295 | @rtype: L{escript.Data}, L{Symbol}, L{numarray.NumArray} depending on the type of arg. |
3296 | """ |
3297 | if axis0 > axis1: |
3298 | axis0,axis1=axis1,axis0 |
3299 | if isinstance(arg,numarray.NumArray): |
3300 | return numarray.swapaxes(arg,axis0,axis1) |
3301 | elif isinstance(arg,escript.Data): |
3302 | return arg._swap_axes(axis0,axis1) |
3303 | elif isinstance(arg,float): |
3304 | raise TyepError,"float argument is not supported." |
3305 | elif isinstance(arg,int): |
3306 | raise TyepError,"int argument is not supported." |
3307 | elif isinstance(arg,Symbol): |
3308 | return SwapAxes_Symbol(arg,axis0,axis1) |
3309 | else: |
3310 | raise TypeError,"Unknown argument type." |
3311 | |
3312 | class SwapAxes_Symbol(DependendSymbol): |
3313 | """ |
3314 | L{Symbol} representing the result of the swap function |
3315 | """ |
3316 | def __init__(self,arg,axis0=0,axis1=1): |
3317 | """ |
3318 | initialization of swap L{Symbol} with argument arg |
3319 | |
3320 | @param arg: argument |
3321 | @type arg: L{Symbol}. |
3322 | @param axis0: axis. C{axis0} must be non-negative and less than the rank of arg. |
3323 | @type axis0: C{int} |
3324 | @param axis1: axis. C{axis1} must be non-negative and less than the rank of arg. |
3325 | @type axis1: C{int} |
3326 | """ |
3327 | if arg.getRank()<2: |
3328 | raise ValueError,"argument must have at least rank 2." |
3329 | if axis0<0 or axis0>arg.getRank()-1: |
3330 | raise ValueError,"axis0 must be between 0 and %s"%arg.getRank()-1 |
3331 | if axis1<0 or axis1>arg.getRank()-1: |
3332 | raise ValueError,"axis1 must be between 0 and %s"%arg.getRank()-1 |
3333 | if axis0 == axis1: |
3334 | raise ValueError,"axis indices must be different." |
3335 | if axis0 > axis1: |
3336 | axis0,axis1=axis1,axis0 |
3337 | s=arg.getShape() |
3338 | s_out=[] |
3339 | for i in range(len(s)): |
3340 | if i == axis0: |
3341 | s_out.append(s[axis1]) |
3342 | elif i == axis1: |
3343 | s_out.append(s[axis0]) |
3344 | else: |
3345 | s_out.append(s[i]) |
3346 | super(SwapAxes_Symbol,self).__init__(args=[arg,axis0,axis1],shape=tuple(s_out),dim=arg.getDim()) |
3347 | |
3348 | def getMyCode(self,argstrs,format="escript"): |
3349 | """ |
3350 | returns a program code that can be used to evaluate the symbol. |
3351 | |
3352 | @param argstrs: gives for each argument a string representing the argument for the evaluation. |
3353 | @type argstrs: C{str} or a C{list} of length 1 of C{str}. |
3354 | @param format: specifies the format to be used. At the moment only "escript" ,"text" and "str" are supported. |
3355 | @type format: C{str} |
3356 | @return: a piece of program code which can be used to evaluate the expression assuming the values for the arguments are available. |
3357 | @rtype: C{str} |
3358 | @raise NotImplementedError: if the requested format is not available |
3359 | """ |
3360 | if format=="escript" or format=="str" or format=="text": |
3361 | return "swap(%s,axis_offset=%s)"%(argstrs[0],argstrs[1]) |
3362 | else: |
3363 | raise NotImplementedError,"SwapAxes_Symbol does not provide program code for format %s."%format |
3364 | |
3365 | def substitute(self,argvals): |
3366 | """ |
3367 | assigns new values to symbols in the definition of the symbol. |
3368 | The method replaces the L{Symbol} u by argvals[u] in the expression defining this object. |
3369 | |
3370 | @param argvals: new values assigned to symbols |
3371 | @type argvals: C{dict} with keywords of type L{Symbol}. |
3372 | @return: result of the substitution process. Operations are executed as much as possible. |
3373 | @rtype: L{escript.Symbol}, C{float}, L{escript.Data}, L{numarray.NumArray} depending on the degree of substitution |
3374 | @raise TypeError: if a value for a L{Symbol} cannot be substituted. |
3375 | """ |
3376 | if argvals.has_key(self): |
3377 | arg=argvals[self] |
3378 | if self.isAppropriateValue(arg): |
3379 | return arg |
3380 | else: |
3381 | raise TypeError,"%s: new value is not appropriate."%str(self) |
3382 | else: |
3383 | arg=self.getSubstitutedArguments(argvals) |
3384 | return swap_axes(arg[0],axis0=arg[1],axis1=arg[2]) |
3385 | |
3386 | def diff(self,arg): |
3387 | """ |
3388 | differential of this object |
3389 | |
3390 | @param arg: the derivative is calculated with respect to arg |
3391 | @type arg: L{escript.Symbol} |
3392 | @return: derivative with respect to C{arg} |
3393 | @rtype: typically L{Symbol} but other types such as C{float}, L{escript.Data}, L{numarray.NumArray} are possible. |
3394 | """ |
3395 | if arg==self: |
3396 | return identity(self.getShape()) |
3397 | else: |
3398 | return swap_axes(self.getDifferentiatedArguments(arg)[0],axis0=self.getArgument()[1],axis1=self.getArgument()[2]) |
3399 | |
3400 | def symmetric(arg): |
3401 | """ |
3402 | returns the symmetric part of the square matrix arg. This is (arg+transpose(arg))/2 |
3403 | |
3404 | @param arg: square matrix. Must have rank 2 or 4 and be square. |
3405 | @type arg: L{numarray.NumArray}, L{escript.Data}, L{Symbol} |
3406 | @return: symmetric part of arg |
3407 | @rtype: L{numarray.NumArray}, L{escript.Data}, L{Symbol} depending on the input |
3408 | """ |
3409 | if isinstance(arg,numarray.NumArray): |
3410 | if arg.rank==2: |
3411 | if not (arg.shape[0]==arg.shape[1]): |
3412 | raise ValueError,"argument must be square." |
3413 | elif arg.rank==4: |
3414 | if not (arg.shape[0]==arg.shape[2] and arg.shape[1]==arg.shape[3]): |
3415 | raise ValueError,"argument must be square." |
3416 | else: |
3417 | raise ValueError,"rank 2 or 4 is required." |
3418 | return (arg+transpose(arg))/2 |