/[escript]/trunk/escript/src/DataAbstract.cpp
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Revision 2881 - (view) (annotate) - [select for diffs]
Modified Thu Jan 28 02:03:15 2010 UTC (9 years, 7 months ago) by jfenwick
File length: 7934 byte(s)
Diff to previous 2792 , to selected 2084
Don't panic.
Updating copyright stamps


Revision 2792 - (view) (annotate) - [select for diffs]
Modified Tue Dec 1 05:02:18 2009 UTC (9 years, 9 months ago) by jfenwick
File length: 7934 byte(s)
Diff to previous 2742 , to selected 2084
Oops.
matrixInverse now checks MPI to see if any other ranks raised exceptions.

Revision 2742 - (view) (annotate) - [select for diffs]
Modified Thu Nov 12 06:03:37 2009 UTC (9 years, 10 months ago) by jfenwick
File length: 7935 byte(s)
Diff to previous 2548 , to selected 2084
Merging changes from the lapack branch.

The inverse() operation has been moved into c++. [No lazy support for this operation yet.]
Optional Lapack support has been added for matrices larger than 3x3. 
service0 is set to use mkl_lapack.




Revision 2548 - (view) (annotate) - [select for diffs]
Modified Mon Jul 20 06:20:06 2009 UTC (10 years, 2 months ago) by jfenwick
File length: 7790 byte(s)
Diff to previous 2436 , to selected 2084
Updating copyright notices

Revision 2436 - (view) (annotate) - [select for diffs]
Modified Mon May 25 05:05:00 2009 UTC (10 years, 3 months ago) by jfenwick
File length: 7790 byte(s)
Diff to previous 2271 , to selected 2084
A fix for escript not compiling on boost 1.39.


Revision 2271 - (view) (annotate) - [select for diffs]
Modified Mon Feb 16 05:08:29 2009 UTC (10 years, 7 months ago) by jfenwick
File length: 7112 byte(s)
Diff to previous 2086 , to selected 2084
Merging version 2269 to trunk


Revision 2086 - (view) (annotate) - [select for diffs]
Modified Mon Nov 24 02:38:50 2008 UTC (10 years, 9 months ago) by jfenwick
File length: 5935 byte(s)
Diff to previous 2084
Added checks in C_GeneralTensorProduct (Data:: and Delayed forms) as 
well as the DataAbstract Constructor to prevent Objects with Rank>4 
being created.

Moved the relevant #define into systemdep.

Removed some comments.


Revision 2084 - (view) (annotate) - [selected]
Modified Fri Nov 21 05:20:42 2008 UTC (10 years, 9 months ago) by jfenwick
File length: 5697 byte(s)
Diff to previous 2005
Fixed a warning in cpp unit tests under dodebug
Pointed the url for python doco at shake200 rather than iservo.
Added support for trace and transpose to LazyData.
Fixed bug in trace to initialise running totals.

Revision 2005 - (view) (annotate) - [select for diffs]
Modified Mon Nov 10 01:21:39 2008 UTC (10 years, 10 months ago) by jfenwick
File length: 5679 byte(s)
Diff to previous 1946 , to selected 2084
Bringing all changes across from schroedinger.
(Note this does not mean development is done, just that it will happen
on the trunk for now).
If anyone notices any problems please contact me.



Revision 1946 - (view) (annotate) - [select for diffs]
Modified Wed Oct 29 05:48:53 2008 UTC (10 years, 10 months ago) by jfenwick
File length: 5535 byte(s)
Diff to previous 1872 , to selected 2084
A cleanup of some of the problems I found doing a Wall compile.

Removed some commented out lines.
Swapped some member initialisers.
Removed virtual qualifiers from some methods in FunctionSpace.
Fixed some unused or (possibly) uninitialised variables.



Revision 1872 - (view) (annotate) - [select for diffs]
Modified Mon Oct 13 00:18:55 2008 UTC (10 years, 11 months ago) by jfenwick
File length: 5534 byte(s)
Diff to previous 1811 , to selected 2084
Closing the moreshared branch


Revision 1811 - (view) (annotate) - [select for diffs]
Modified Thu Sep 25 23:11:13 2008 UTC (10 years, 11 months ago) by ksteube
File length: 5022 byte(s)
Diff to previous 1803 , to selected 2084
Copyright updated in all files


Revision 1803 - (view) (annotate) - [select for diffs]
Modified Wed Sep 24 06:20:29 2008 UTC (10 years, 11 months ago) by jfenwick
File length: 5057 byte(s)
Diff to previous 1796 , to selected 2084
All about making DataEmpty instances throw.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Exposed getDim from AbstractDomain to python to fix bug.

Added isEmpty member to DataAbstract to allow it to throw is queries are 
made about a DataEmpty instance.


Added exceptions to DataAbstract, DataEmpty and Data to prevent calls 
being made against DataEmpty objects.
The following still work as expected on DataEmpty instances

copy, getDomain, getFunctionSpace, isEmpty, isExpanded, isProtected, 
isTagged, setprotection.

You can also call interpolate, however it should throw if you try to 
change FunctionSpaces.



Revision 1796 - (view) (annotate) - [select for diffs]
Modified Wed Sep 17 01:45:46 2008 UTC (11 years ago) by jfenwick
File length: 6100 byte(s)
Diff to previous 1487 , to selected 2084
Merged noarrayview branch onto trunk.



Revision 1487 - (view) (annotate) - [select for diffs]
Modified Thu Apr 10 05:28:01 2008 UTC (11 years, 5 months ago) by gross
File length: 5089 byte(s)
Diff to previous 1388 , to selected 2084
reordering when reading Netcfd files added.

Revision 1388 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:58 2008 UTC (11 years, 8 months ago) by trankine
File length: 5022 byte(s)
Diff to previous 1387 , to selected 2084
And get the *(&(*&(* name right

Revision 1387 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:26 2008 UTC (11 years, 8 months ago) by trankine
Original Path: temp/escript/src/DataAbstract.cpp
File length: 5022 byte(s)
Diff to previous 1384 , to selected 2084
Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

Revision 1384 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 02:29:38 2008 UTC (11 years, 8 months ago) by phornby
Original Path: temp_trunk_copy/escript/src/DataAbstract.cpp
File length: 5022 byte(s)
Diff to previous 1312 , to selected 2084
Make a temp copy of the trunk before checking in the windows changes



Revision 1312 - (view) (annotate) - [select for diffs]
Modified Mon Sep 24 06:18:44 2007 UTC (11 years, 11 months ago) by ksteube
File length: 5022 byte(s)
Diff to previous 1118 , to selected 2084
The MPI branch is hereby closed. All future work should be in trunk.

Previously in revision 1295 I merged the latest changes to trunk into trunk-mpi-branch.
In this revision I copied all files from trunk-mpi-branch over the corresponding
trunk files. I did not use 'svn merge', it was a copy.


Revision 1118 - (view) (annotate) - [select for diffs]
Modified Tue Apr 24 08:55:04 2007 UTC (12 years, 4 months ago) by gross
File length: 5155 byte(s)
Diff to previous 964 , to selected 2084
problem with reset of faulty PDE rhs fixed.

Revision 964 - (view) (annotate) - [select for diffs]
Modified Tue Feb 13 05:10:26 2007 UTC (12 years, 7 months ago) by gross
File length: 5042 byte(s)
Diff to previous 950 , to selected 2084
The set/getRefVal functions of Data objects have been removed (mainly to avoid later problems with MPI).
Moreover, a faster access to the reference id of samples has been introduced. I don't think that anybody will
profit form this at this stage but it will allow a faster dump of data objects.



Revision 950 - (view) (annotate) - [select for diffs]
Modified Tue Feb 6 07:01:11 2007 UTC (12 years, 7 months ago) by gross
File length: 5508 byte(s)
Diff to previous 922 , to selected 2084
escript data objects can now be saved to netCDF files, see http://www.unidata.ucar.edu/software/netcdf/.
Currently only constant data are implemented with expanded and tagged data to follow.
There are two new functions to dump a data object

   s=Data(...)
   s.dump(<filename>)

and to recover it

   s=load(<filename>, domain)

Notice that the function space of s is recovered but domain is still need. 

dump and load will replace archive and extract.

The installation needs now the netCDF installed. 



Revision 922 - (view) (annotate) - [select for diffs]
Modified Fri Jan 5 04:23:05 2007 UTC (12 years, 8 months ago) by gross
File length: 5313 byte(s)
Diff to previous 921 , to selected 2084
setValueOfDataPoint accepts double value as argument now

Revision 921 - (view) (annotate) - [select for diffs]
Modified Fri Jan 5 00:54:37 2007 UTC (12 years, 8 months ago) by gross
File length: 5089 byte(s)
Diff to previous 804 , to selected 2084
I have done some clarification on functions that allow to access individual data point values in a Data object. 
The term "data point number" is always local on a MPI process and referes to the value (data_point_in_sample, sample)
as a single identifyer (data_point_in_sample + sample * number_data_points_per_sample). a "global data point number"
referes to a tuple of a processour id and local data point number.

The function convertToNumArrayFromSampleNo has been removed now and convertToNumArrayFromDPNo renamed to getValueOfDataPoint.
There are two new functions:

   getNumberOfDataPoints
   setValueOfDataPoint

This allows you to do things like:

  in=Data(..)
  out=Data(..)
   for i in xrange(in.getNumberOfDataPoints())
       in_loc=in.getValueOfDataPoint(i)
       out_loc=< some operations on in_loc>
       out.setValueOfDataPoint(i,out_loc)


Also mindp  is renamed to  minGlobalDataPoint and there is a new function getValueOfGlobalDataPoint. While in MPI the functions getNumberOfDataPoints and getValueOfDataPoint are working locally on each process (so the code above is executed in parallel).
the latter allows getting a single value across all processors. 



Revision 804 - (view) (annotate) - [select for diffs]
Modified Thu Aug 10 01:12:16 2006 UTC (13 years, 1 month ago) by gross
File length: 4837 byte(s)
Diff to previous 800 , to selected 2084
the new function swap_axes + tests added. (It replaces swap).



Revision 800 - (view) (annotate) - [select for diffs]
Modified Tue Aug 8 11:23:18 2006 UTC (13 years, 1 month ago) by gross
File length: 4825 byte(s)
Diff to previous 775 , to selected 2084
new function _swap. Python wrapper + testing is still missing.



Revision 775 - (view) (annotate) - [select for diffs]
Modified Mon Jul 10 04:00:08 2006 UTC (13 years, 2 months ago) by ksteube
File length: 4690 byte(s)
Diff to previous 615 , to selected 2084
Modified the following python methods in escript/py_src/util.py to
call faster C++ methods:
	escript_trace
	escript_transpose
	escript_symmetric
	escript_nonsymmetric


Revision 615 - (view) (annotate) - [select for diffs]
Modified Wed Mar 22 02:12:00 2006 UTC (13 years, 6 months ago) by elspeth
File length: 4122 byte(s)
Diff to previous 576 , to selected 2084
More copyright information.


Revision 576 - (view) (annotate) - [select for diffs]
Modified Fri Mar 3 08:28:42 2006 UTC (13 years, 6 months ago) by gross
File length: 4444 byte(s)
Diff to previous 480 , to selected 2084
some steps towards eigenvalue and eigenvector calculation

Revision 480 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 05:15:12 2006 UTC (13 years, 7 months ago) by jgs
File length: 4106 byte(s)
Diff to previous 474 , to selected 2084
rationalise #includes and forward declarations


Revision 474 - (view) (annotate) - [select for diffs]
Modified Mon Jan 30 04:23:44 2006 UTC (13 years, 7 months ago) by jgs
File length: 4146 byte(s)
Copied from: trunk/escript/src/Data/DataAbstract.cpp revision 469
Diff to previous 155 , to selected 2084
restructure escript source tree
move src/Data/* -> src
remove inc
modify #includes and cpppath settings accordingly


Revision 155 - (view) (annotate) - [select for diffs]
Modified Wed Nov 9 02:02:19 2005 UTC (13 years, 10 months ago) by jgs
Original Path: trunk/escript/src/Data/DataAbstract.cpp
File length: 4172 byte(s)
Diff to previous 149 , to selected 2084
move all directories from trunk/esys2 into trunk and remove esys2


Revision 149 - (view) (annotate) - [select for diffs]
Modified Thu Sep 1 03:31:39 2005 UTC (14 years ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 4172 byte(s)
Diff to previous 126 , to selected 2084
Merge of development branch dev-02 back to main trunk on 2005-09-01


Revision 126 - (view) (annotate) - [select for diffs]
Modified Fri Jul 22 03:53:08 2005 UTC (14 years, 2 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 4002 byte(s)
Diff to previous 123 , to selected 2084
Merge of development branch back to main trunk on 2005-07-22


Revision 123 - (view) (annotate) - [select for diffs]
Modified Fri Jul 8 04:08:13 2005 UTC (14 years, 2 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 3822 byte(s)
Diff to previous 119 , to selected 2084
Merge of development branch back to main trunk on 2005-07-08


Revision 119 - (view) (annotate) - [select for diffs]
Modified Tue Apr 12 04:45:05 2005 UTC (14 years, 5 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 3531 byte(s)
Diff to previous 117 , to selected 2084
*** empty log message ***


Revision 117 - (view) (annotate) - [select for diffs]
Modified Fri Apr 1 05:48:57 2005 UTC (14 years, 5 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 3438 byte(s)
Diff to previous 110 , to selected 2084
*** empty log message ***


Revision 110 - (view) (annotate) - [select for diffs]
Modified Mon Feb 14 04:14:42 2005 UTC (14 years, 7 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 3498 byte(s)
Diff to previous 108 , to selected 2084
*** empty log message ***


Revision 108 - (view) (annotate) - [select for diffs]
Modified Thu Jan 27 06:21:59 2005 UTC (14 years, 7 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 3024 byte(s)
Diff to previous 82 , to selected 2084
*** empty log message ***


Revision 82 - (view) (annotate) - [select for diffs]
Added Tue Oct 26 06:53:54 2004 UTC (14 years, 10 months ago) by jgs
Original Path: trunk/esys2/escript/src/Data/DataAbstract.cpp
File length: 2984 byte(s)
Diff to selected 2084
Initial revision


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