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// $Id$ |
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/* |
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****************************************************************************** |
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* * |
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* COPYRIGHT ACcESS 2004 - All Rights Reserved * |
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* * |
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* This software is the property of ACcESS. No part of this code * |
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* may be copied in any form or by any means without the expressed written * |
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* consent of ACcESS. Copying, use or modification of this software * |
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* by any unauthorised person is illegal unless that person has a software * |
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* license agreement with ACcESS. * |
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* * |
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****************************************************************************** |
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*/ |
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extern "C" { |
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#include "finley/finleyC/Finley.h" |
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#include "finley/finleyC/Assemble.h" |
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#include "finley/finleyC/Mesh.h" |
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#include "finley/finleyC/Finley.h" |
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#include "finley/finleyC/System.h" |
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} |
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#include "finley/CPPAdapter/SystemMatrixAdapter.h" |
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#include "finley/CPPAdapter/MeshAdapter.h" |
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#include "finley/CPPAdapter/FinleyError.h" |
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#include "finley/CPPAdapter/FinleyAdapterException.h" |
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#include "escript/Data/FunctionSpaceFactory.h" |
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#include "escript/Data/Data.h" |
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#include "escript/Data/DataArrayView.h" |
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#include "escript/Data/FunctionSpace.h" |
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#include "escript/Data/DataFactory.h" |
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#include <iostream> |
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#include <vector> |
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#include <sstream> |
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|
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using namespace std; |
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using namespace escript; |
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|
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namespace finley { |
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|
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struct null_deleter |
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{ |
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void operator()(void const *ptr) const |
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{ |
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} |
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}; |
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|
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// |
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// define the statics |
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MeshAdapter::FunctionSpaceNamesMapType MeshAdapter::m_functionSpaceTypeNames; |
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const int MeshAdapter::DegreesOfFreedom=FINLEY_DEGREES_OF_FREEDOM; |
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const int MeshAdapter::ReducedDegreesOfFreedom=FINLEY_REDUCED_DEGREES_OF_FREEDOM; |
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const int MeshAdapter::Nodes=FINLEY_NODES; |
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const int MeshAdapter::Elements=FINLEY_ELEMENTS; |
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const int MeshAdapter::FaceElements=FINLEY_FACE_ELEMENTS; |
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const int MeshAdapter::Points=FINLEY_POINTS; |
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const int MeshAdapter::ContactElementsZero=FINLEY_CONTACT_ELEMENTS_1; |
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const int MeshAdapter::ContactElementsOne=FINLEY_CONTACT_ELEMENTS_2; |
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|
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MeshAdapter::MeshAdapter(Finley_Mesh* finleyMesh) |
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{ |
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setFunctionSpaceTypeNames(); |
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// |
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// need to use a null_deleter as Finley_Mesh_dealloc deletes the pointer |
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// for us. |
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m_finleyMesh.reset(finleyMesh,null_deleter()); |
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} |
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// |
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// The copy constructor should just increment the use count |
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MeshAdapter::MeshAdapter(const MeshAdapter& in): |
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m_finleyMesh(in.m_finleyMesh) |
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{ |
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setFunctionSpaceTypeNames(); |
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} |
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|
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MeshAdapter::~MeshAdapter() |
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{ |
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// |
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// I hope the case for the pointer being zero has been taken care of. |
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// cout << "In MeshAdapter destructor." << endl; |
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if (m_finleyMesh.unique()) { |
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// cout << "Calling dealloc." << endl; |
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Finley_Mesh_dealloc(m_finleyMesh.get()); |
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// cout << "Finished dealloc." << endl; |
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} |
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} |
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|
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Finley_Mesh* MeshAdapter::getFinley_Mesh() const { |
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return m_finleyMesh.get(); |
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} |
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|
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void MeshAdapter::write(const std::string& fileName) const |
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{ |
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char fName[fileName.size()+1]; |
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strcpy(fName,fileName.c_str()); |
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Finley_Mesh_write(m_finleyMesh.get(),fName); |
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checkFinleyError(); |
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} |
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|
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// void MeshAdapter::getTagList(int functionSpaceType, |
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// int* numTags) const |
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// { |
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// Finley_Mesh_tagList(m_finleyMesh.get(),functionSpaceType,tagList,numTags); |
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// return; |
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// } |
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|
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string MeshAdapter::getDescription() const |
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{ |
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return "FinleyMesh"; |
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} |
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|
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string MeshAdapter::functionSpaceTypeAsString(int functionSpaceType) const |
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{ |
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FunctionSpaceNamesMapType::iterator loc; |
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loc=m_functionSpaceTypeNames.find(functionSpaceType); |
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if (loc==m_functionSpaceTypeNames.end()) { |
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return "Invalid function space type code."; |
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} else { |
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return loc->second; |
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} |
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} |
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|
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bool MeshAdapter::isValidFunctionSpaceType(int functionSpaceType) const |
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{ |
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FunctionSpaceNamesMapType::iterator loc; |
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loc=m_functionSpaceTypeNames.find(functionSpaceType); |
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return (loc!=m_functionSpaceTypeNames.end()); |
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} |
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|
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void MeshAdapter::setFunctionSpaceTypeNames() |
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{ |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(DegreesOfFreedom,"Finley_DegreesOfFreedom")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(ReducedDegreesOfFreedom,"Finley_ReducedDegreesOfFreedom")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(Nodes,"Finley_Nodes")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(Elements,"Finley_Elements")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(FaceElements,"Finley_Face_Elements")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(Points,"Finley_Points")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(ContactElementsZero,"Finley_Contact_Elements_0")); |
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m_functionSpaceTypeNames.insert |
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(FunctionSpaceNamesMapType::value_type(ContactElementsOne,"Finley_Contact_Elements_1")); |
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} |
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|
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int MeshAdapter::getContinuousFunctionCode() const |
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{ |
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return Nodes; |
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} |
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int MeshAdapter::getFunctionCode() const |
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{ |
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return Elements; |
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} |
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int MeshAdapter::getFunctionOnBoundaryCode() const |
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{ |
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return FaceElements; |
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} |
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int MeshAdapter::getFunctionOnContactZeroCode() const |
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{ |
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return ContactElementsZero; |
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} |
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int MeshAdapter::getFunctionOnContactOneCode() const |
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{ |
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return ContactElementsOne; |
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} |
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|
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int MeshAdapter::getSolutionCode() const |
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{ |
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return DegreesOfFreedom; |
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} |
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int MeshAdapter::getReducedSolutionCode() const |
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{ |
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return ReducedDegreesOfFreedom; |
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} |
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int MeshAdapter::getDiracDeltaFunctionCode() const |
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{ |
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return Points; |
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} |
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// |
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// returns a pointer to the tag list of samples of functionSpaceType |
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// |
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void MeshAdapter::getTagList(int functionSpaceType, int** tagList, |
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int* numTags) const |
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{ |
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*tagList=NULL; |
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*numTags=0; |
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Finley_Mesh* mesh=m_finleyMesh.get(); |
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switch (functionSpaceType) { |
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case(Nodes): |
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if (mesh->Nodes!=NULL) { |
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*tagList=mesh->Nodes->Tag; |
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*numTags=mesh->Nodes->numNodes; |
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} |
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break; |
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case(Elements): |
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if (mesh->Elements!=NULL) { |
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*tagList=mesh->Elements->Tag; |
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*numTags=mesh->Elements->numElements; |
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} |
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break; |
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case(FaceElements): |
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if (mesh->FaceElements!=NULL) { |
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*tagList=mesh->FaceElements->Tag; |
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*numTags=mesh->FaceElements->numElements; |
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} |
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break; |
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case(Points): |
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if (mesh->Points!=NULL) { |
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*tagList=mesh->Points->Tag; |
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*numTags=mesh->Points->numElements; |
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} |
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break; |
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case(ContactElementsZero): |
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if (mesh->ContactElements!=NULL) { |
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*tagList=mesh->ContactElements->Tag; |
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*numTags=mesh->ContactElements->numElements; |
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} |
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break; |
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case(ContactElementsOne): |
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if (mesh->ContactElements!=NULL) { |
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*tagList=mesh->ContactElements->Tag; |
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*numTags=mesh->ContactElements->numElements; |
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} |
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break; |
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case(DegreesOfFreedom): |
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if (mesh->Nodes!=NULL) { |
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*tagList=NULL; |
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*numTags=0; |
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} |
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break; |
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case(ReducedDegreesOfFreedom): |
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if (mesh->Nodes!=NULL) { |
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*tagList=NULL; |
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*numTags=0; |
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} |
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break; |
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default: |
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stringstream temp; |
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temp << "Error - Invalid function space type: " |
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<< functionSpaceType << " for domain: " << getDescription(); |
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throw FinleyAdapterException(temp.str()); |
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break; |
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} |
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if (*tagList==NULL) { |
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stringstream temp; |
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temp << "Error - no tags available for " << functionSpaceType << " for domain: " << getDescription(); |
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throw FinleyAdapterException(temp.str()); |
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} |
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return; |
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} |
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// |
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// returns a pointer to the reference no list of samples of functionSpaceType |
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// |
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void MeshAdapter::getReferenceNoList(int functionSpaceType, int** referenceNoList, |
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int* numReferenceNo) const |
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{ |
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*referenceNoList=NULL; |
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*numReferenceNo=0; |
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Finley_Mesh* mesh=m_finleyMesh.get(); |
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switch (functionSpaceType) { |
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case(Nodes): |
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if (mesh->Nodes!=NULL) { |
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*referenceNoList=mesh->Nodes->Id; |
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*numReferenceNo=mesh->Nodes->numNodes; |
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} |
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break; |
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case(Elements): |
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if (mesh->Elements!=NULL) { |
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*referenceNoList=mesh->Elements->Id; |
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*numReferenceNo=mesh->Elements->numElements; |
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} |
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break; |
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case(FaceElements): |
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if (mesh->FaceElements!=NULL) { |
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*referenceNoList=mesh->FaceElements->Id; |
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*numReferenceNo=mesh->FaceElements->numElements; |
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} |
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break; |
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case(Points): |
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if (mesh->Points!=NULL) { |
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*referenceNoList=mesh->Points->Id; |
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*numReferenceNo=mesh->Points->numElements; |
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} |
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break; |
288 |
case(ContactElementsZero): |
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if (mesh->ContactElements!=NULL) { |
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*referenceNoList=mesh->ContactElements->Id; |
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*numReferenceNo=mesh->ContactElements->numElements; |
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} |
293 |
break; |
294 |
case(ContactElementsOne): |
295 |
if (mesh->ContactElements!=NULL) { |
296 |
*referenceNoList=mesh->ContactElements->Id; |
297 |
*numReferenceNo=mesh->ContactElements->numElements; |
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} |
299 |
break; |
300 |
case(DegreesOfFreedom): |
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if (mesh->Nodes!=NULL) { |
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*referenceNoList=NULL; |
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*numReferenceNo=0; |
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} |
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break; |
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case(ReducedDegreesOfFreedom): |
307 |
if (mesh->Nodes!=NULL) { |
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*referenceNoList=NULL; |
309 |
*numReferenceNo=0; |
310 |
} |
311 |
break; |
312 |
default: |
313 |
stringstream temp; |
314 |
temp << "Error - Invalid function space type: " |
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<< functionSpaceType << " for domain: " << getDescription(); |
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throw FinleyAdapterException(temp.str()); |
317 |
break; |
318 |
} |
319 |
if (*referenceNoList==NULL) { |
320 |
stringstream temp; |
321 |
temp << "Error - reference number list available for " << functionSpaceType << " for domain: " << getDescription(); |
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throw FinleyAdapterException(temp.str()); |
323 |
} |
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return; |
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} |
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|
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// |
328 |
// return the spatial dimension of the Mesh: |
329 |
// |
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int MeshAdapter::getDim() const |
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{ |
332 |
int numDim=Finley_Mesh_getDim(m_finleyMesh.get()); |
333 |
checkFinleyError(); |
334 |
return numDim; |
335 |
} |
336 |
// |
337 |
// return the number of data points per sample and the number of samples |
338 |
// needed to represent data on a parts of the mesh. |
339 |
// |
340 |
pair<int,int> MeshAdapter::getDataShape(int functionSpaceCode) const |
341 |
{ |
342 |
int numDataPointsPerSample=0; |
343 |
int numSamples=0; |
344 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
345 |
switch (functionSpaceCode) { |
346 |
case(Nodes): |
347 |
numDataPointsPerSample=1; |
348 |
if (mesh->Nodes!=NULL) numSamples=mesh->Nodes->numNodes; |
349 |
break; |
350 |
case(Elements): |
351 |
if (mesh->Elements!=NULL) { |
352 |
numSamples=mesh->Elements->numElements; |
353 |
numDataPointsPerSample=mesh->Elements->ReferenceElement->numQuadNodes; |
354 |
} |
355 |
break; |
356 |
case(FaceElements): |
357 |
if (mesh->FaceElements!=NULL) { |
358 |
numDataPointsPerSample=mesh->FaceElements->ReferenceElement->numQuadNodes; |
359 |
numSamples=mesh->FaceElements->numElements; |
360 |
} |
361 |
break; |
362 |
case(Points): |
363 |
if (mesh->Points!=NULL) { |
364 |
numDataPointsPerSample=1; |
365 |
numSamples=mesh->Points->numElements; |
366 |
} |
367 |
break; |
368 |
case(ContactElementsZero): |
369 |
if (mesh->ContactElements!=NULL) { |
370 |
numDataPointsPerSample=mesh->ContactElements->ReferenceElement->numQuadNodes; |
371 |
numSamples=mesh->ContactElements->numElements; |
372 |
} |
373 |
break; |
374 |
case(ContactElementsOne): |
375 |
if (mesh->ContactElements!=NULL) { |
376 |
numDataPointsPerSample=mesh->ContactElements->ReferenceElement->numQuadNodes; |
377 |
numSamples=mesh->ContactElements->numElements; |
378 |
} |
379 |
break; |
380 |
case(DegreesOfFreedom): |
381 |
if (mesh->Nodes!=NULL) { |
382 |
numDataPointsPerSample=1; |
383 |
numSamples=mesh->Nodes->numDegreesOfFreedom; |
384 |
} |
385 |
break; |
386 |
case(ReducedDegreesOfFreedom): |
387 |
if (mesh->Nodes!=NULL) { |
388 |
numDataPointsPerSample=1; |
389 |
numSamples=mesh->Nodes->reducedNumDegreesOfFreedom; |
390 |
} |
391 |
break; |
392 |
default: |
393 |
stringstream temp; |
394 |
temp << "Error - Invalid function space type: " |
395 |
<< functionSpaceCode << " for domain: " << getDescription(); |
396 |
throw FinleyAdapterException(temp.str()); |
397 |
break; |
398 |
} |
399 |
return pair<int,int>(numDataPointsPerSample,numSamples); |
400 |
} |
401 |
// |
402 |
// adds linear PDE of second order into a given stiffness matrix and right hand side: |
403 |
// |
404 |
void MeshAdapter::addPDEToSystem( |
405 |
SystemMatrixAdapter& mat, Data& rhs, |
406 |
const Data& A, const Data& B, const Data& C,const Data& D,const Data& X,const Data& Y, |
407 |
const Data& d, const Data& y, |
408 |
const Data& d_contact,const Data& y_contact) const |
409 |
{ |
410 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
411 |
Finley_Assemble_PDE(mesh->Nodes,mesh->Elements,mat.getFinley_SystemMatrix(),&(rhs.getDataC()), |
412 |
&(A.getDataC()),&(B.getDataC()),&(C.getDataC()),&(D.getDataC()),&(X.getDataC()),&(Y.getDataC())); |
413 |
checkFinleyError(); |
414 |
Finley_Assemble_RobinCondition(mesh->Nodes,mesh->FaceElements, |
415 |
mat.getFinley_SystemMatrix(), |
416 |
&(rhs.getDataC()), |
417 |
&(d.getDataC()),&(y.getDataC()), |
418 |
Finley_Assemble_handelShapeMissMatch_Mean_out); |
419 |
checkFinleyError(); |
420 |
Finley_Assemble_RobinCondition(mesh->Nodes,mesh->FaceElements, |
421 |
mat.getFinley_SystemMatrix(), |
422 |
&(rhs.getDataC()), |
423 |
&(d_contact.getDataC()), |
424 |
&(y_contact.getDataC()), |
425 |
Finley_Assemble_handelShapeMissMatch_Step_out); |
426 |
checkFinleyError(); |
427 |
} |
428 |
// |
429 |
// adds linear PDE of second order into the right hand side only |
430 |
// |
431 |
void MeshAdapter::addPDEToRHS( Data& rhs, |
432 |
const Data& X,const Data& Y, const Data& y, const Data& y_contact) const |
433 |
{ |
434 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
435 |
Finley_Assemble_PDE(mesh->Nodes,mesh->Elements,0,&(rhs.getDataC()),0,0,0,0,&(X.getDataC()),&(Y.getDataC())); |
436 |
checkFinleyError(); |
437 |
Finley_Assemble_RobinCondition(mesh->Nodes,mesh->FaceElements,0,&(rhs.getDataC()),0,&(y.getDataC()), |
438 |
Finley_Assemble_handelShapeMissMatch_Mean_out); |
439 |
// cout << "Calling :addPDEToRHS." << endl; |
440 |
checkFinleyError(); |
441 |
Finley_Assemble_RobinCondition(mesh->Nodes,mesh->FaceElements,0,&(rhs.getDataC()),0,&(y_contact.getDataC()), |
442 |
Finley_Assemble_handelShapeMissMatch_Step_out); |
443 |
// cout << "Calling :addPDEToRHS." << endl; |
444 |
checkFinleyError(); |
445 |
} |
446 |
// |
447 |
// interpolates data between different function spaces: |
448 |
// |
449 |
void MeshAdapter::interpolateOnDomain(Data& target,const Data& in) const |
450 |
{ |
451 |
const MeshAdapter& inDomain=dynamic_cast<const MeshAdapter&>(in.getFunctionSpace().getDomain()); |
452 |
const MeshAdapter& targetDomain=dynamic_cast<const MeshAdapter&>(target.getFunctionSpace().getDomain()); |
453 |
if (inDomain!=*this) |
454 |
throw FinleyAdapterException("Error - Illegal domain of interpolant."); |
455 |
if (targetDomain!=*this) |
456 |
throw FinleyAdapterException("Error - Illegal domain of interpolation target."); |
457 |
|
458 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
459 |
switch(in.getFunctionSpace().getTypeCode()) { |
460 |
case(Nodes): |
461 |
switch(target.getFunctionSpace().getTypeCode()) { |
462 |
case(Nodes): |
463 |
case(ReducedDegreesOfFreedom): |
464 |
case(DegreesOfFreedom): |
465 |
Finley_Assemble_CopyNodalData(mesh->Nodes,&(target.getDataC()),&(in.getDataC())); |
466 |
break; |
467 |
case(Elements): |
468 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Elements,&(in.getDataC()),&(target.getDataC())); |
469 |
break; |
470 |
case(FaceElements): |
471 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->FaceElements,&(in.getDataC()),&(target.getDataC())); |
472 |
break; |
473 |
case(Points): |
474 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Points,&(in.getDataC()),&(target.getDataC())); |
475 |
break; |
476 |
case(ContactElementsZero): |
477 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->ContactElements,&(in.getDataC()),&(target.getDataC())); |
478 |
break; |
479 |
case(ContactElementsOne): |
480 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->ContactElements,&(in.getDataC()),&(target.getDataC())); |
481 |
break; |
482 |
default: |
483 |
Finley_ErrorCode=TYPE_ERROR; |
484 |
sprintf(Finley_ErrorMsg,"Interpolation on Domain: Finley does not know anything about function space type %d",target.getFunctionSpace().getTypeCode()); |
485 |
break; |
486 |
} |
487 |
break; |
488 |
case(Elements): |
489 |
if (target.getFunctionSpace().getTypeCode()==Elements) { |
490 |
Finley_Assemble_CopyElementData(mesh->Elements,&(target.getDataC()),&(in.getDataC())); |
491 |
} else { |
492 |
Finley_ErrorCode=TYPE_ERROR; |
493 |
sprintf(Finley_ErrorMsg,"No interpolation with data on elements possible."); |
494 |
} |
495 |
break; |
496 |
case(FaceElements): |
497 |
if (target.getFunctionSpace().getTypeCode()==FaceElements) { |
498 |
Finley_Assemble_CopyElementData(mesh->FaceElements,&(target.getDataC()),&(in.getDataC())); |
499 |
} else { |
500 |
Finley_ErrorCode=TYPE_ERROR; |
501 |
sprintf(Finley_ErrorMsg,"No interpolation with data on face elements possible."); |
502 |
break; |
503 |
} |
504 |
case(Points): |
505 |
if (target.getFunctionSpace().getTypeCode()==Points) { |
506 |
Finley_Assemble_CopyElementData(mesh->Points,&(target.getDataC()),&(in.getDataC())); |
507 |
} else { |
508 |
Finley_ErrorCode=TYPE_ERROR; |
509 |
sprintf(Finley_ErrorMsg,"No interpolation with data on points possible."); |
510 |
break; |
511 |
} |
512 |
break; |
513 |
case(ContactElementsZero): |
514 |
case(ContactElementsOne): |
515 |
if (target.getFunctionSpace().getTypeCode()==ContactElementsZero || target.getFunctionSpace().getTypeCode()==ContactElementsOne) { |
516 |
Finley_Assemble_CopyElementData(mesh->ContactElements,&(target.getDataC()),&(in.getDataC())); |
517 |
} else { |
518 |
Finley_ErrorCode=TYPE_ERROR; |
519 |
sprintf(Finley_ErrorMsg,"No interpolation with data on contact elements possible."); |
520 |
break; |
521 |
} |
522 |
break; |
523 |
case(DegreesOfFreedom): |
524 |
switch(target.getFunctionSpace().getTypeCode()) { |
525 |
case(ReducedDegreesOfFreedom): |
526 |
case(DegreesOfFreedom): |
527 |
case(Nodes): |
528 |
Finley_Assemble_CopyNodalData(mesh->Nodes,&(target.getDataC()),&(in.getDataC())); |
529 |
break; |
530 |
case(Elements): |
531 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Elements,&(in.getDataC()),&(target.getDataC())); |
532 |
break; |
533 |
case(FaceElements): |
534 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->FaceElements,&(in.getDataC()),&(target.getDataC())); |
535 |
break; |
536 |
case(Points): |
537 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Points,&(in.getDataC()),&(target.getDataC())); |
538 |
break; |
539 |
case(ContactElementsZero): |
540 |
case(ContactElementsOne): |
541 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->ContactElements,&(in.getDataC()),&(target.getDataC())); |
542 |
break; |
543 |
default: |
544 |
Finley_ErrorCode=TYPE_ERROR; |
545 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",target.getFunctionSpace().getTypeCode()); |
546 |
break; |
547 |
} |
548 |
break; |
549 |
case(ReducedDegreesOfFreedom): |
550 |
switch(target.getFunctionSpace().getTypeCode()) { |
551 |
case(ReducedDegreesOfFreedom): |
552 |
case(Nodes): |
553 |
Finley_Assemble_CopyNodalData(mesh->Nodes,&(target.getDataC()),&(in.getDataC())); |
554 |
break; |
555 |
case(Elements): |
556 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Elements,&(in.getDataC()),&(target.getDataC())); |
557 |
break; |
558 |
case(FaceElements): |
559 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->FaceElements,&(in.getDataC()),&(target.getDataC())); |
560 |
break; |
561 |
case(Points): |
562 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->Points,&(in.getDataC()),&(target.getDataC())); |
563 |
break; |
564 |
case(ContactElementsZero): |
565 |
case(ContactElementsOne): |
566 |
Finley_Assemble_interpolate(mesh->Nodes,mesh->ContactElements,&(in.getDataC()),&(target.getDataC())); |
567 |
break; |
568 |
case(DegreesOfFreedom): |
569 |
Finley_ErrorCode=TYPE_ERROR; |
570 |
sprintf(Finley_ErrorMsg,"Finley does not support interpolation from reduced degrees of freedom to degrees of freedom"); |
571 |
break; |
572 |
default: |
573 |
Finley_ErrorCode=TYPE_ERROR; |
574 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",target.getFunctionSpace().getTypeCode()); |
575 |
break; |
576 |
} |
577 |
break; |
578 |
default: |
579 |
Finley_ErrorCode=TYPE_ERROR; |
580 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",in.getFunctionSpace().getTypeCode()); |
581 |
break; |
582 |
} |
583 |
checkFinleyError(); |
584 |
} |
585 |
|
586 |
// |
587 |
// copies the locations of sample points into x: |
588 |
// |
589 |
void MeshAdapter::setToX(Data& arg) const |
590 |
{ |
591 |
const MeshAdapter& argDomain=dynamic_cast<const MeshAdapter&>(arg.getFunctionSpace().getDomain()); |
592 |
if (argDomain!=*this) |
593 |
throw FinleyAdapterException("Error - Illegal domain of data point locations"); |
594 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
595 |
// in case of values node coordinates we can do the job directly: |
596 |
if (arg.getFunctionSpace().getTypeCode()==Nodes) { |
597 |
Finley_Assemble_NodeCoordinates(mesh->Nodes,&(arg.getDataC())); |
598 |
} else { |
599 |
Data tmp_data=Vector(0.0,continuousFunction(asAbstractContinuousDomain()),true); |
600 |
Finley_Assemble_NodeCoordinates(mesh->Nodes,&(tmp_data.getDataC())); |
601 |
// this is then interpolated onto arg: |
602 |
interpolateOnDomain(arg,tmp_data); |
603 |
} |
604 |
checkFinleyError(); |
605 |
} |
606 |
// |
607 |
// return the normal vectors at the location of data points as a Data object: |
608 |
// |
609 |
void MeshAdapter::setToNormal(Data& normal) const |
610 |
{ |
611 |
const MeshAdapter& normalDomain=dynamic_cast<const MeshAdapter&>(normal.getFunctionSpace().getDomain()); |
612 |
if (normalDomain!=*this) |
613 |
throw FinleyAdapterException("Error - Illegal domain of normal locations"); |
614 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
615 |
switch(normal.getFunctionSpace().getTypeCode()) { |
616 |
case(Nodes): |
617 |
Finley_ErrorCode=TYPE_ERROR; |
618 |
sprintf(Finley_ErrorMsg,"Finley does not support surface normal vectors for nodes"); |
619 |
break; |
620 |
case(Elements): |
621 |
Finley_ErrorCode=TYPE_ERROR; |
622 |
sprintf(Finley_ErrorMsg,"Finley does not support surface normal vectors for elements"); |
623 |
break; |
624 |
case (FaceElements): |
625 |
Finley_Assemble_setNormal(mesh->Nodes,mesh->FaceElements,&(normal.getDataC())); |
626 |
break; |
627 |
case(Points): |
628 |
Finley_ErrorCode=TYPE_ERROR; |
629 |
sprintf(Finley_ErrorMsg,"Finley does not support surface normal vectors for point elements"); |
630 |
break; |
631 |
case (ContactElementsOne): |
632 |
case (ContactElementsZero): |
633 |
Finley_Assemble_setNormal(mesh->Nodes,mesh->ContactElements,&(normal.getDataC())); |
634 |
break; |
635 |
case(DegreesOfFreedom): |
636 |
Finley_ErrorCode=TYPE_ERROR; |
637 |
sprintf(Finley_ErrorMsg,"Finley does not support surface normal vectors for degrees of freedom."); |
638 |
break; |
639 |
case(ReducedDegreesOfFreedom): |
640 |
Finley_ErrorCode=TYPE_ERROR; |
641 |
sprintf(Finley_ErrorMsg,"Finley does not support surface normal vectors for reduced degrees of freedom."); |
642 |
break; |
643 |
default: |
644 |
Finley_ErrorCode=TYPE_ERROR; |
645 |
sprintf(Finley_ErrorMsg,"Normal Vectors: Finley does not know anything about function space type %d",normal.getFunctionSpace().getTypeCode()); |
646 |
break; |
647 |
} |
648 |
checkFinleyError(); |
649 |
} |
650 |
// |
651 |
// interpolates data to other domain: |
652 |
// |
653 |
void MeshAdapter::interpolateACross(Data& target,const Data& source) const |
654 |
{ |
655 |
const MeshAdapter& targetDomain=dynamic_cast<const MeshAdapter&>(target.getFunctionSpace().getDomain()); |
656 |
if (targetDomain!=*this) |
657 |
throw FinleyAdapterException("Error - Illegal domain of interpolation target"); |
658 |
|
659 |
Finley_ErrorCode=SYSTEM_ERROR; |
660 |
sprintf(Finley_ErrorMsg,"Finley does not allow interpolation across domains yet."); |
661 |
checkFinleyError(); |
662 |
} |
663 |
// |
664 |
// calculates the integral of a function defined of arg: |
665 |
// |
666 |
void MeshAdapter::setToIntegrals(std::vector<double>& integrals,const Data& arg) const |
667 |
{ |
668 |
const MeshAdapter& argDomain=dynamic_cast<const MeshAdapter&>(arg.getFunctionSpace().getDomain()); |
669 |
if (argDomain!=*this) |
670 |
throw FinleyAdapterException("Error - Illegal domain of integration kernel"); |
671 |
|
672 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
673 |
switch(arg.getFunctionSpace().getTypeCode()) { |
674 |
case(Nodes): |
675 |
Finley_ErrorCode=TYPE_ERROR; |
676 |
sprintf(Finley_ErrorMsg,"Integral of data on nodes is not supported."); |
677 |
break; |
678 |
case(Elements): |
679 |
Finley_Assemble_integrate(mesh->Nodes,mesh->Elements,&(arg.getDataC()),&integrals[0]); |
680 |
break; |
681 |
case(FaceElements): |
682 |
Finley_Assemble_integrate(mesh->Nodes,mesh->FaceElements,&(arg.getDataC()),&integrals[0]); |
683 |
break; |
684 |
case(Points): |
685 |
Finley_ErrorCode=TYPE_ERROR; |
686 |
sprintf(Finley_ErrorMsg,"Integral of data on points is not supported."); |
687 |
break; |
688 |
case(ContactElementsZero): |
689 |
Finley_Assemble_integrate(mesh->Nodes,mesh->ContactElements,&(arg.getDataC()),&integrals[0]); |
690 |
break; |
691 |
case(ContactElementsOne): |
692 |
Finley_Assemble_integrate(mesh->Nodes,mesh->ContactElements,&(arg.getDataC()),&integrals[0]); |
693 |
break; |
694 |
case(DegreesOfFreedom): |
695 |
Finley_ErrorCode=TYPE_ERROR; |
696 |
sprintf(Finley_ErrorMsg,"Integral of data on degrees of freedom is not supported."); |
697 |
break; |
698 |
case(ReducedDegreesOfFreedom): |
699 |
Finley_ErrorCode=TYPE_ERROR; |
700 |
sprintf(Finley_ErrorMsg,"Integral of data on reduced degrees of freedom is not supported."); |
701 |
break; |
702 |
default: |
703 |
Finley_ErrorCode=TYPE_ERROR; |
704 |
sprintf(Finley_ErrorMsg,"Integrals: Finley does not know anything about function space type %d",arg.getFunctionSpace().getTypeCode()); |
705 |
break; |
706 |
} |
707 |
checkFinleyError(); |
708 |
} |
709 |
// |
710 |
// calculates the gradient of arg: |
711 |
// |
712 |
void MeshAdapter::setToGradient(Data& grad,const Data& arg) const |
713 |
{ |
714 |
const MeshAdapter& argDomain=dynamic_cast<const MeshAdapter&>(arg.getFunctionSpace().getDomain()); |
715 |
if (argDomain!=*this) |
716 |
throw FinleyAdapterException("Error - Illegal domain of gradient argument"); |
717 |
const MeshAdapter& gradDomain=dynamic_cast<const MeshAdapter&>(grad.getFunctionSpace().getDomain()); |
718 |
if (gradDomain!=*this) |
719 |
throw FinleyAdapterException("Error - Illegal domain of gradient"); |
720 |
|
721 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
722 |
switch(grad.getFunctionSpace().getTypeCode()) { |
723 |
case(Nodes): |
724 |
Finley_ErrorCode=TYPE_ERROR; |
725 |
sprintf(Finley_ErrorMsg,"Gradient at nodes is not supported."); |
726 |
break; |
727 |
case(Elements): |
728 |
Finley_Assemble_gradient(mesh->Nodes,mesh->Elements,&(grad.getDataC()),&(arg.getDataC())); |
729 |
break; |
730 |
case(FaceElements): |
731 |
Finley_Assemble_gradient(mesh->Nodes,mesh->FaceElements,&(grad.getDataC()),&(arg.getDataC())); |
732 |
break; |
733 |
case(Points): |
734 |
Finley_ErrorCode=TYPE_ERROR; |
735 |
sprintf(Finley_ErrorMsg,"Gradient at points is not supported."); |
736 |
break; |
737 |
case(ContactElementsZero): |
738 |
Finley_Assemble_gradient(mesh->Nodes,mesh->ContactElements,&(grad.getDataC()),&(arg.getDataC())); |
739 |
break; |
740 |
case(ContactElementsOne): |
741 |
Finley_Assemble_gradient(mesh->Nodes,mesh->ContactElements,&(grad.getDataC()),&(arg.getDataC())); |
742 |
break; |
743 |
case(DegreesOfFreedom): |
744 |
Finley_ErrorCode=TYPE_ERROR; |
745 |
sprintf(Finley_ErrorMsg,"Gradient at degrees of freedom is not supported."); |
746 |
break; |
747 |
case(ReducedDegreesOfFreedom): |
748 |
Finley_ErrorCode=TYPE_ERROR; |
749 |
sprintf(Finley_ErrorMsg,"Gradient at reduced degrees of freedom is not supported."); |
750 |
break; |
751 |
default: |
752 |
Finley_ErrorCode=TYPE_ERROR; |
753 |
sprintf(Finley_ErrorMsg,"Gradient: Finley does not know anything about function space type %d",arg.getFunctionSpace().getTypeCode()); |
754 |
break; |
755 |
} |
756 |
checkFinleyError(); |
757 |
} |
758 |
// |
759 |
// returns the size of elements: |
760 |
// |
761 |
void MeshAdapter::setToSize(Data& size) const |
762 |
{ |
763 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
764 |
escriptDataC tmp=size.getDataC(); |
765 |
switch(size.getFunctionSpace().getTypeCode()) { |
766 |
case(Nodes): |
767 |
Finley_ErrorCode=TYPE_ERROR; |
768 |
sprintf(Finley_ErrorMsg,"Size of nodes is not supported."); |
769 |
break; |
770 |
case(Elements): |
771 |
Finley_Assemble_getSize(mesh->Nodes,mesh->Elements,&tmp); |
772 |
break; |
773 |
case(FaceElements): |
774 |
Finley_Assemble_getSize(mesh->Nodes,mesh->FaceElements,&tmp); |
775 |
break; |
776 |
case(Points): |
777 |
Finley_ErrorCode=TYPE_ERROR; |
778 |
sprintf(Finley_ErrorMsg,"Size of point elements is not supported."); |
779 |
break; |
780 |
case(ContactElementsZero): |
781 |
case(ContactElementsOne): |
782 |
Finley_Assemble_getSize(mesh->Nodes,mesh->ContactElements,&tmp); |
783 |
break; |
784 |
case(DegreesOfFreedom): |
785 |
Finley_ErrorCode=TYPE_ERROR; |
786 |
sprintf(Finley_ErrorMsg,"Size of degrees of freedom is not supported."); |
787 |
break; |
788 |
case(ReducedDegreesOfFreedom): |
789 |
Finley_ErrorCode=TYPE_ERROR; |
790 |
sprintf(Finley_ErrorMsg,"Size of reduced degrees of freedom is not supported."); |
791 |
break; |
792 |
default: |
793 |
Finley_ErrorCode=TYPE_ERROR; |
794 |
sprintf(Finley_ErrorMsg,"Element size: Finley does not know anything about function space type %d",size.getFunctionSpace().getTypeCode()); |
795 |
break; |
796 |
} |
797 |
checkFinleyError(); |
798 |
} |
799 |
// sets the location of nodes: |
800 |
void MeshAdapter::setNewX(const Data& new_x) |
801 |
{ |
802 |
Finley_Mesh* mesh=m_finleyMesh.get(); |
803 |
const MeshAdapter& newDomain=dynamic_cast<const MeshAdapter&>(new_x.getFunctionSpace().getDomain()); |
804 |
if (newDomain!=*this) |
805 |
throw FinleyAdapterException("Error - Illegal domain of new point locations"); |
806 |
Finley_NodeFile_setCoordinates(mesh->Nodes,&(new_x.getDataC())); |
807 |
checkFinleyError(); |
808 |
} |
809 |
// saves a data array in openDX format: |
810 |
void MeshAdapter::saveDX(const std::string& filename,const Data& arg) const |
811 |
{ |
812 |
Finley_Mesh_saveDX(filename.c_str(),m_finleyMesh.get(),&(arg.getDataC())); |
813 |
checkFinleyError(); |
814 |
} |
815 |
// saves a data array in openVTK format: |
816 |
void MeshAdapter::saveVTK(const std::string& filename,const Data& arg) const |
817 |
{ |
818 |
Finley_Mesh_saveVTK(filename.c_str(),m_finleyMesh.get(),&(arg.getDataC())); |
819 |
checkFinleyError(); |
820 |
} |
821 |
// creates a SystemMatrixAdapter stiffness matrix an initializes it with zeros: |
822 |
SystemMatrixAdapter MeshAdapter::newSystemMatrix( |
823 |
const int row_blocksize, |
824 |
const escript::FunctionSpace& row_functionspace, |
825 |
const int column_blocksize, |
826 |
const escript::FunctionSpace& column_functionspace, |
827 |
const int type) const |
828 |
{ |
829 |
int reduceRowOrder=0; |
830 |
int reduceColOrder=0; |
831 |
// is the domain right? |
832 |
const MeshAdapter& row_domain=dynamic_cast<const MeshAdapter&>(row_functionspace.getDomain()); |
833 |
if (row_domain!=*this) |
834 |
throw FinleyAdapterException("Error - domain of row function space does not match the domain of matrix generator."); |
835 |
const MeshAdapter& col_domain=dynamic_cast<const MeshAdapter&>(column_functionspace.getDomain()); |
836 |
if (col_domain!=*this) |
837 |
throw FinleyAdapterException("Error - domain of columnn function space does not match the domain of matrix generator."); |
838 |
// is the function space type right |
839 |
if (row_functionspace.getTypeCode()==DegreesOfFreedom) { |
840 |
reduceRowOrder=0; |
841 |
} else if (row_functionspace.getTypeCode()==ReducedDegreesOfFreedom) { |
842 |
reduceRowOrder=1; |
843 |
} else { |
844 |
throw FinleyAdapterException("Error - illegal function space type for system matrix rows."); |
845 |
} |
846 |
if (column_functionspace.getTypeCode()==DegreesOfFreedom) { |
847 |
reduceColOrder=0; |
848 |
} else if (column_functionspace.getTypeCode()==ReducedDegreesOfFreedom) { |
849 |
reduceColOrder=1; |
850 |
} else { |
851 |
throw FinleyAdapterException("Error - illegal function space type for system matrix columns."); |
852 |
} |
853 |
// generate matrix: |
854 |
|
855 |
Finley_SystemMatrixPattern* fsystemMatrixPattern=Finley_getPattern(getFinley_Mesh(),reduceRowOrder,reduceColOrder); |
856 |
checkFinleyError(); |
857 |
Finley_SystemMatrix* fsystemMatrix=Finley_SystemMatrix_alloc(type,fsystemMatrixPattern,row_blocksize,column_blocksize); |
858 |
checkFinleyError(); |
859 |
return SystemMatrixAdapter(fsystemMatrix,row_blocksize,row_functionspace,column_blocksize,column_functionspace); |
860 |
} |
861 |
// |
862 |
// vtkObject MeshAdapter::createVtkObject() const |
863 |
// TODO: |
864 |
// |
865 |
// |
866 |
// returns true if data at the atom_type is considered as being cell centered: |
867 |
bool MeshAdapter::isCellOriented(int functionSpaceCode) const |
868 |
{ |
869 |
switch(functionSpaceCode) { |
870 |
case(Nodes): |
871 |
case(DegreesOfFreedom): |
872 |
case(ReducedDegreesOfFreedom): |
873 |
return false; |
874 |
break; |
875 |
case(Elements): |
876 |
case(FaceElements): |
877 |
case(Points): |
878 |
case(ContactElementsZero): |
879 |
case(ContactElementsOne): |
880 |
return true; |
881 |
break; |
882 |
default: |
883 |
Finley_ErrorCode=TYPE_ERROR; |
884 |
sprintf(Finley_ErrorMsg,"Cell: Finley does not know anything about function space type %d",functionSpaceCode); |
885 |
break; |
886 |
} |
887 |
checkFinleyError(); |
888 |
return false; |
889 |
} |
890 |
bool MeshAdapter::probeInterpolationOnDomain(int functionSpaceType_source,int functionSpaceType_target) const |
891 |
{ |
892 |
switch(functionSpaceType_source) { |
893 |
case(Nodes): |
894 |
switch(functionSpaceType_target) { |
895 |
case(Nodes): |
896 |
case(ReducedDegreesOfFreedom): |
897 |
case(DegreesOfFreedom): |
898 |
case(Elements): |
899 |
case(FaceElements): |
900 |
case(Points): |
901 |
case(ContactElementsZero): |
902 |
case(ContactElementsOne): |
903 |
return true; |
904 |
default: |
905 |
Finley_ErrorCode=TYPE_ERROR; |
906 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",functionSpaceType_target); |
907 |
} |
908 |
break; |
909 |
case(Elements): |
910 |
if (functionSpaceType_target==Elements) { |
911 |
return true; |
912 |
} else { |
913 |
return false; |
914 |
} |
915 |
case(FaceElements): |
916 |
if (functionSpaceType_target==FaceElements) { |
917 |
return true; |
918 |
} else { |
919 |
return false; |
920 |
} |
921 |
case(Points): |
922 |
if (functionSpaceType_target==Points) { |
923 |
return true; |
924 |
} else { |
925 |
return false; |
926 |
} |
927 |
case(ContactElementsZero): |
928 |
case(ContactElementsOne): |
929 |
if (functionSpaceType_target==ContactElementsZero || functionSpaceType_target==ContactElementsOne) { |
930 |
return true; |
931 |
} else { |
932 |
return false; |
933 |
} |
934 |
case(DegreesOfFreedom): |
935 |
switch(functionSpaceType_target) { |
936 |
case(ReducedDegreesOfFreedom): |
937 |
case(DegreesOfFreedom): |
938 |
case(Nodes): |
939 |
case(Elements): |
940 |
case(FaceElements): |
941 |
case(Points): |
942 |
case(ContactElementsZero): |
943 |
case(ContactElementsOne): |
944 |
return true; |
945 |
default: |
946 |
Finley_ErrorCode=TYPE_ERROR; |
947 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",functionSpaceType_target); |
948 |
} |
949 |
break; |
950 |
case(ReducedDegreesOfFreedom): |
951 |
switch(functionSpaceType_target) { |
952 |
case(ReducedDegreesOfFreedom): |
953 |
case(Nodes): |
954 |
case(Elements): |
955 |
case(FaceElements): |
956 |
case(Points): |
957 |
case(ContactElementsZero): |
958 |
case(ContactElementsOne): |
959 |
return true; |
960 |
case(DegreesOfFreedom): |
961 |
return false; |
962 |
default: |
963 |
Finley_ErrorCode=TYPE_ERROR; |
964 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",functionSpaceType_target); |
965 |
} |
966 |
break; |
967 |
default: |
968 |
Finley_ErrorCode=TYPE_ERROR; |
969 |
sprintf(Finley_ErrorMsg,"Interpolation On Domain: Finley does not know anything about function space type %d",functionSpaceType_source); |
970 |
break; |
971 |
} |
972 |
checkFinleyError(); |
973 |
return false; |
974 |
} |
975 |
bool MeshAdapter::probeInterpolationACross(int functionSpaceType_source,const AbstractDomain& targetDomain, int functionSpaceType_target) const |
976 |
{ |
977 |
return false; |
978 |
} |
979 |
|
980 |
bool MeshAdapter::operator==(const MeshAdapter& other) const |
981 |
{ |
982 |
return (m_finleyMesh==other.m_finleyMesh); |
983 |
} |
984 |
|
985 |
bool MeshAdapter::operator!=(const MeshAdapter& other) const |
986 |
{ |
987 |
return !operator==(other); |
988 |
} |
989 |
|
990 |
int MeshAdapter::getSystemMatrixTypeId(const int solver, const bool symmetry) const |
991 |
{ |
992 |
int out=Finley_SystemMatrix_getSystemMatrixTypeId(solver,symmetry?1:0); |
993 |
checkFinleyError(); |
994 |
return out; |
995 |
} |
996 |
Data MeshAdapter::getX() const |
997 |
{ |
998 |
return continuousFunction(asAbstractContinuousDomain()).getX(); |
999 |
} |
1000 |
Data MeshAdapter::getNormal() const |
1001 |
{ |
1002 |
return functionOnBoundary(asAbstractContinuousDomain()).getNormal(); |
1003 |
} |
1004 |
Data MeshAdapter::getSize() const |
1005 |
{ |
1006 |
return function(asAbstractContinuousDomain()).getSize(); |
1007 |
} |
1008 |
|
1009 |
int MeshAdapter::getTagFromSampleNo(int functionSpaceType, int sampleNo) const |
1010 |
{ |
1011 |
int* tagList; |
1012 |
int numTags; |
1013 |
getTagList(functionSpaceType, &tagList, &numTags); |
1014 |
return tagList[sampleNo]; |
1015 |
} |
1016 |
|
1017 |
int MeshAdapter::getReferenceNoFromSampleNo(int functionSpaceType, int sampleNo) const |
1018 |
{ |
1019 |
int* referenceNoList; |
1020 |
int numReferenceNo; |
1021 |
getReferenceNoList(functionSpaceType, &referenceNoList, &numReferenceNo); |
1022 |
return referenceNoList[sampleNo]; |
1023 |
} |
1024 |
|
1025 |
} // end of namespace |