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Revision 3379 - (view) (annotate) - [select for diffs]
Modified Wed Nov 24 04:48:49 2010 UTC (7 years, 10 months ago) by gross
File length: 18927 byte(s)
Diff to previous 3269
some clarification on lumping

Revision 3269 - (view) (annotate) - [select for diffs]
Modified Wed Oct 13 03:21:50 2010 UTC (8 years ago) by jfenwick
File length: 18901 byte(s)
Diff to previous 3259
Fixed some intel compiler warnings.
Put linearPDEs back the way it was and present a common interface for dudley and finley (as per Lutz)


Revision 3259 - (view) (annotate) - [select for diffs]
Modified Mon Oct 11 01:48:14 2010 UTC (8 years ago) by jfenwick
File length: 18881 byte(s)
Diff to previous 2987
Merging dudley and scons updates from branches


Revision 2987 - (view) (annotate) - [select for diffs]
Modified Tue Mar 16 01:32:43 2010 UTC (8 years, 7 months ago) by gross
File length: 19231 byte(s)
Diff to previous 2898
FCT solver rewritten

Revision 2898 - (view) (annotate) - [select for diffs]
Modified Mon Feb 1 01:23:46 2010 UTC (8 years, 8 months ago) by caltinay
File length: 19222 byte(s)
Diff to previous 2895
Reverted the move of system_dep.h since it didn't solve the problem nicely.
Created a wrapper class for the needed functionality instead.


Revision 2895 - (view) (annotate) - [select for diffs]
Modified Fri Jan 29 04:58:16 2010 UTC (8 years, 8 months ago) by caltinay
File length: 18817 byte(s)
Diff to previous 2881
Moved finley's system_dep.h file up to the C level to be able to export two
functions that are used by the dataexporter. Changed include paths and C++
style comments accordingly.


Revision 2881 - (view) (annotate) - [select for diffs]
Modified Thu Jan 28 02:03:15 2010 UTC (8 years, 8 months ago) by jfenwick
File length: 18798 byte(s)
Diff to previous 2856
Don't panic.
Updating copyright stamps


Revision 2856 - (view) (annotate) - [select for diffs]
Modified Mon Jan 18 04:14:37 2010 UTC (8 years, 8 months ago) by gross
File length: 18798 byte(s)
Diff to previous 2751
FunctionSpaces provide now some information about their approximation order.

Revision 2751 - (view) (annotate) - [select for diffs]
Modified Wed Nov 18 00:30:47 2009 UTC (8 years, 10 months ago) by caltinay
File length: 18605 byte(s)
Diff to previous 2642
Removed stray forward declaration.


Revision 2642 - (view) (annotate) - [select for diffs]
Modified Tue Sep 1 04:15:50 2009 UTC (9 years, 1 month ago) by jfenwick
File length: 18673 byte(s)
Diff to previous 2640
pre cleanup

Revision 2640 - (view) (annotate) - [select for diffs]
Modified Mon Aug 31 06:22:10 2009 UTC (9 years, 1 month ago) by jfenwick
File length: 18598 byte(s)
Diff to previous 2635
Adding getMPIComm


Revision 2635 - (view) (annotate) - [select for diffs]
Modified Thu Aug 27 04:54:41 2009 UTC (9 years, 1 month ago) by jfenwick
File length: 18503 byte(s)
Diff to previous 2548
A bunch of changes related to saveDataCSV.
[Not completed or unit tested yet]

Added saveDataCSV to util.py
AbstractDomain (and MeshAdapter) have a commonFunctionSpace method to 
take a group of FunctionSpaces and return something they can all be interpolated to.

Added pointToStream() in DataTypes to help print points.

added actsConstant() to data - required because DataConstant doesn't store samples the same way other Data do.

Revision 2548 - (view) (annotate) - [select for diffs]
Modified Mon Jul 20 06:20:06 2009 UTC (9 years, 2 months ago) by jfenwick
File length: 18233 byte(s)
Diff to previous 2533
Updating copyright notices

Revision 2533 - (view) (annotate) - [select for diffs]
Modified Wed Jul 15 05:57:01 2009 UTC (9 years, 3 months ago) by gross
File length: 18233 byte(s)
Diff to previous 2521
finley delivers now a status identifier of the mesh.

Revision 2521 - (view) (annotate) - [select for diffs]
Modified Tue Jul 7 00:08:58 2009 UTC (9 years, 3 months ago) by jfenwick
File length: 17865 byte(s)
Diff to previous 2519
Modified Lazy so that resolving a single sample uses the node cache method.
Fixed some doxygen problems.

Revision 2519 - (view) (annotate) - [select for diffs]
Modified Mon Jul 6 00:43:08 2009 UTC (9 years, 3 months ago) by jfenwick
File length: 17696 byte(s)
Diff to previous 2487
Correcting some doxygen errors

Revision 2487 - (view) (annotate) - [select for diffs]
Modified Tue Jun 23 04:26:07 2009 UTC (9 years, 3 months ago) by jfenwick
File length: 17746 byte(s)
Diff to previous 2421
Fixed const-ness on some return values.
Null-Domain now reports tag one as being in use.

Revision 2421 - (view) (annotate) - [select for diffs]
Modified Thu May 14 02:29:06 2009 UTC (9 years, 5 months ago) by gross
File length: 17734 byte(s)
Diff to previous 2151
vtk writer supports now meta data and meta data schema

Revision 2151 - (view) (annotate) - [select for diffs]
Modified Wed Dec 10 06:34:25 2008 UTC (9 years, 10 months ago) by caltinay
File length: 17668 byte(s)
Diff to previous 1877
Moved common functionality from saveDX/VTK into private method. May be used
for future save* methods.


Revision 1877 - (view) (annotate) - [select for diffs]
Modified Tue Oct 14 02:58:39 2008 UTC (10 years ago) by ksteube
File length: 17469 byte(s)
Diff to previous 1859
convection.py checkpointing uses mkdir/rmdir, and under MPI there
was a race condition.

mkdir needs to be run on only one CPU and then a barrier to prevent
working processors from using the directory before it exists.

Added methods domain.MPIBarrier and domain.onMasterProcessor() to
implement this technique.

A more general solution might be possible in the future.


Revision 1859 - (view) (annotate) - [select for diffs]
Modified Wed Oct 8 03:03:37 2008 UTC (10 years ago) by gross
File length: 17187 byte(s)
Diff to previous 1811
first version of testing for transport solver.

Revision 1811 - (view) (annotate) - [select for diffs]
Modified Thu Sep 25 23:11:13 2008 UTC (10 years ago) by ksteube
File length: 16734 byte(s)
Diff to previous 1802
Copyright updated in all files


Revision 1802 - (view) (annotate) - [select for diffs]
Modified Tue Sep 23 01:03:29 2008 UTC (10 years ago) by jfenwick
File length: 16769 byte(s)
Diff to previous 1801
Added canTag methods to FunctionSpace and AbstractDomain (and its 
offspring).
This checks to see if the domain supports tags for the given type of 
function space.

Constructors for DataTagged now throw exceptions if you attempt to make 
a DataTagged with a FunctionSpace which does not support tags.
To allow the default constructor to work, NullDomain has a single 
functioncode which "supports" tagging.

Fixed a bug in DataTagged::toString and DataTypes::pointToString.

Added FunctionSpace::getListOfTagsSTL.

algorithm(DataTagged, BinaryFunction) in DataAlgorithm now only 
processes tags known to be in use.
This fixes mantis issue #0000186.

Added comment to Data.h intro warning about holding references if the 
underlying DataAbstract changes.

_python_ unit tests have been updated to test TaggedData with invalid 
FunctionSpaces and to give the correct answers to Lsup etc.



Revision 1801 - (view) (annotate) - [select for diffs]
Modified Fri Sep 19 01:37:09 2008 UTC (10 years ago) by ksteube
File length: 16601 byte(s)
Diff to previous 1800
Fixed serialization of I/O for MPI...code didn't compile without MPI


Revision 1800 - (view) (annotate) - [select for diffs]
Modified Thu Sep 18 05:28:20 2008 UTC (10 years ago) by ksteube
File length: 16715 byte(s)
Diff to previous 1754
Serialized parallel I/O when writing mesh or data to NetCDF file on multiple MPI processors.
Added domain method getMPIComm() to complement getMPISize() and getMPIRank().


Revision 1754 - (view) (annotate) - [select for diffs]
Modified Sun Sep 7 22:07:26 2008 UTC (10 years, 1 month ago) by ksteube
File length: 16574 byte(s)
Diff to previous 1716
Added new test suite run_inputOutput.py to systematically test I/O.
Can determine if two domains are same with Fourier analysis.
Added new method getNumDataPointsGlobal to return number of DPs of a distributed mesh.
Reading of tags in ReadMeshMPI failed occasionally, should be more robust now.


Revision 1716 - (view) (annotate) - [select for diffs]
Modified Thu Aug 21 05:03:49 2008 UTC (10 years, 1 month ago) by gross
File length: 16417 byte(s)
Diff to previous 1407
getListOfTags method added to FunctionSpace class

Revision 1407 - (view) (annotate) - [select for diffs]
Modified Mon Feb 4 06:45:48 2008 UTC (10 years, 8 months ago) by gross
File length: 16124 byte(s)
Diff to previous 1388
new upwinding algorithm (still fails)

Revision 1388 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:58 2008 UTC (10 years, 9 months ago) by trankine
File length: 16167 byte(s)
Diff to previous 1387
And get the *(&(*&(* name right

Revision 1387 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:26 2008 UTC (10 years, 9 months ago) by trankine
Original Path: temp/finley/src/CPPAdapter/MeshAdapter.h
File length: 16167 byte(s)
Diff to previous 1384
Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

Revision 1384 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 02:29:38 2008 UTC (10 years, 9 months ago) by phornby
Original Path: temp_trunk_copy/finley/src/CPPAdapter/MeshAdapter.h
File length: 16167 byte(s)
Diff to previous 1367
Make a temp copy of the trunk before checking in the windows changes



Revision 1367 - (view) (annotate) - [select for diffs]
Modified Wed Dec 19 02:45:07 2007 UTC (10 years, 9 months ago) by gross
File length: 16167 byte(s)
Diff to previous 1366
finley can now assemble a transport problem.

Revision 1366 - (view) (annotate) - [select for diffs]
Modified Tue Dec 18 05:49:17 2007 UTC (10 years, 10 months ago) by gross
File length: 15577 byte(s)
Diff to previous 1339
finley can create a TransportProblem now

Revision 1339 - (view) (annotate) - [select for diffs]
Modified Wed Nov 7 01:53:12 2007 UTC (10 years, 11 months ago) by ksteube
File length: 15144 byte(s)
Diff to previous 1326
Modified scons target release_src to include lib/ and include/ since
their presence is required for a build.  Modified
mydomain.print_mesh_info(True) to include more useful info about a
distributed domain.  Added mypde.getOperator().print_matrix_info(True)
to tell about a distributed matrix.



Revision 1326 - (view) (annotate) - [select for diffs]
Modified Mon Oct 1 08:10:41 2007 UTC (11 years ago) by ksteube
File length: 15134 byte(s)
Diff to previous 1312
Implemented domain.print_mesh_info() so we can see the distribution of elements & nodes.
Implemented -DBOUNDS_CHECK to catch an error with periodicN=True.


Revision 1312 - (view) (annotate) - [select for diffs]
Modified Mon Sep 24 06:18:44 2007 UTC (11 years ago) by ksteube
File length: 14939 byte(s)
Diff to previous 1204
The MPI branch is hereby closed. All future work should be in trunk.

Previously in revision 1295 I merged the latest changes to trunk into trunk-mpi-branch.
In this revision I copied all files from trunk-mpi-branch over the corresponding
trunk files. I did not use 'svn merge', it was a copy.


Revision 1204 - (view) (annotate) - [select for diffs]
Modified Sat Jun 23 11:43:12 2007 UTC (11 years, 3 months ago) by gross
File length: 14718 byte(s)
Diff to previous 1062
a frame for an improved lumping procedure added.

Revision 1062 - (view) (annotate) - [select for diffs]
Modified Mon Mar 26 06:17:53 2007 UTC (11 years, 6 months ago) by gross
File length: 14446 byte(s)
Diff to previous 1059
reduced integration schemes are implemented now for grad, integrate, etc. Tests still to be added.

Revision 1059 - (view) (annotate) - [select for diffs]
Modified Fri Mar 23 11:01:53 2007 UTC (11 years, 6 months ago) by gross
File length: 14249 byte(s)
Diff to previous 1044
first steps toward reduced element integration order. The escript bit is done but the finley part still needs work.

Revision 1044 - (view) (annotate) - [select for diffs]
Modified Mon Mar 19 07:29:31 2007 UTC (11 years, 7 months ago) by gross
File length: 13393 byte(s)
Diff to previous 964
clear name tagging is supported now.

Revision 964 - (view) (annotate) - [select for diffs]
Modified Tue Feb 13 05:10:26 2007 UTC (11 years, 8 months ago) by gross
File length: 12653 byte(s)
Diff to previous 782
The set/getRefVal functions of Data objects have been removed (mainly to avoid later problems with MPI).
Moreover, a faster access to the reference id of samples has been introduced. I don't think that anybody will
profit form this at this stage but it will allow a faster dump of data objects.



Revision 782 - (view) (annotate) - [select for diffs]
Modified Tue Jul 18 00:47:47 2006 UTC (12 years, 3 months ago) by bcumming
File length: 12716 byte(s)
Diff to previous 767
Large number of changes to Finley for meshing in MPI.

- optimisation and neatening up of rectcanglular mesh generation code
- first and second order 1D, 2D and 3D rectangular meshes are now
  available in finley and escript using MPI.
- reduced meshes now generated in MPI, and interpolation to and from 
  reduced data types now supported.  


Revision 767 - (view) (annotate) - [select for diffs]
Modified Fri Jun 30 07:29:08 2006 UTC (12 years, 3 months ago) by gross
File length: 12710 byte(s)
Diff to previous 757
new FunctionSpace method setTags added

Revision 757 - (view) (annotate) - [select for diffs]
Modified Mon Jun 26 13:12:56 2006 UTC (12 years, 3 months ago) by woo409
File length: 12448 byte(s)
Diff to previous 682
+ Merge of intelc_win32 branch (revision 741:755) with trunk. Tested on iVEC altix (run_tests and py_tests all pass)


Revision 682 - (view) (annotate) - [select for diffs]
Modified Mon Mar 27 02:43:09 2006 UTC (12 years, 6 months ago) by robwdcock
File length: 11693 byte(s)
Diff to previous 626
+ NEW BUILD SYSTEM

This commit contains the new build system with cross-platform support.
Most things work are before though you can have more control.

ENVIRONMENT settings have changed:
+ You no longer require LD_LIBRARY_PATH or PYTHONPATH to point to the
esysroot for building and testing performed via scons
+ ACcESS altix users: It is recommended you change your modules to load
the latest intel compiler and other libraries required by boost to match
the setup in svn (you can override). The correct modules are as follows

module load intel_cc.9.0.026
export
MODULEPATH=${MODULEPATH}:/data/raid2/toolspp4/modulefiles/gcc-3.3.6
module load boost/1.33.0/python-2.4.1
module load python/2.4.1
module load numarray/1.3.3



Revision 626 - (view) (annotate) - [select for diffs]
Modified Thu Mar 23 02:16:36 2006 UTC (12 years, 6 months ago) by elspeth
File length: 11675 byte(s)
Diff to previous 547
Copyright information inserted


Revision 547 - (view) (annotate) - [select for diffs]
Modified Tue Feb 21 06:10:54 2006 UTC (12 years, 7 months ago) by gross
File length: 11997 byte(s)
Diff to previous 480
solution and reduced solution can have reference numbers now!

Revision 480 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 05:15:12 2006 UTC (12 years, 8 months ago) by jgs
File length: 12545 byte(s)
Diff to previous 474
rationalise #includes and forward declarations


Revision 474 - (view) (annotate) - [select for diffs]
Modified Mon Jan 30 04:23:44 2006 UTC (12 years, 8 months ago) by jgs
File length: 12600 byte(s)
Diff to previous 472
restructure escript source tree
move src/Data/* -> src
remove inc
modify #includes and cpppath settings accordingly


Revision 472 - (view) (annotate) - [select for diffs]
Modified Fri Jan 27 01:50:59 2006 UTC (12 years, 8 months ago) by jgs
File length: 12678 byte(s)
Diff to previous 471
rationalise all #includes


Revision 471 - (view) (annotate) - [select for diffs]
Modified Fri Jan 27 01:33:02 2006 UTC (12 years, 8 months ago) by jgs
File length: 12326 byte(s)
Diff to previous 203
reorganise finley src tree to remove inc dir and src/finley directory


Revision 203 - (view) (annotate) - [select for diffs]
Modified Wed Nov 23 04:36:15 2005 UTC (12 years, 10 months ago) by jgs
Original Path: trunk/finley/src/finley/CPPAdapter/MeshAdapter.h
File length: 12326 byte(s)
Diff to previous 201
adjust include file names to allow for new finley source tree structure


Revision 201 - (view) (annotate) - [select for diffs]
Modified Wed Nov 23 04:10:21 2005 UTC (12 years, 10 months ago) by jgs
Original Path: trunk/finley/src/finley/CPPAdapter/MeshAdapter.h
File length: 12359 byte(s)
Diff to previous 155
copy finleyC and CPPAdapter to finley and finley/CPPAdapter to
facilitate scons builds


Revision 155 - (view) (annotate) - [select for diffs]
Modified Wed Nov 9 02:02:19 2005 UTC (12 years, 11 months ago) by jgs
File length: 12359 byte(s)
Diff to previous 153
move all directories from trunk/esys2 into trunk and remove esys2


Revision 153 - (view) (annotate) - [select for diffs]
Modified Tue Oct 25 01:51:20 2005 UTC (12 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 12359 byte(s)
Diff to previous 150
Merge of development branch dev-02 back to main trunk on 2005-10-25


Revision 150 - (view) (annotate) - [select for diffs]
Modified Thu Sep 15 03:44:45 2005 UTC (13 years, 1 month ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 11814 byte(s)
Diff to previous 149
Merge of development branch dev-02 back to main trunk on 2005-09-15


Revision 149 - (view) (annotate) - [select for diffs]
Modified Thu Sep 1 03:31:39 2005 UTC (13 years, 1 month ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 11802 byte(s)
Diff to previous 123
Merge of development branch dev-02 back to main trunk on 2005-09-01


Revision 123 - (view) (annotate) - [select for diffs]
Modified Fri Jul 8 04:08:13 2005 UTC (13 years, 3 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 11711 byte(s)
Diff to previous 121
Merge of development branch back to main trunk on 2005-07-08


Revision 121 - (view) (annotate) - [select for diffs]
Modified Fri May 6 04:26:16 2005 UTC (13 years, 5 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 11635 byte(s)
Diff to previous 110
Merge of development branch back to main trunk on 2005-05-06


Revision 110 - (view) (annotate) - [select for diffs]
Modified Mon Feb 14 04:14:42 2005 UTC (13 years, 8 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 11609 byte(s)
Diff to previous 104
*** empty log message ***


Revision 104 - (view) (annotate) - [select for diffs]
Modified Fri Dec 17 07:43:12 2004 UTC (13 years, 10 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 10853 byte(s)
Diff to previous 102
*** empty log message ***


Revision 102 - (view) (annotate) - [select for diffs]
Modified Wed Dec 15 07:08:39 2004 UTC (13 years, 10 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 10929 byte(s)
Diff to previous 100
*** empty log message ***


Revision 100 - (view) (annotate) - [select for diffs]
Modified Wed Dec 15 03:48:48 2004 UTC (13 years, 10 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 10452 byte(s)
Diff to previous 97
*** empty log message ***


Revision 97 - (view) (annotate) - [select for diffs]
Modified Tue Dec 14 05:39:33 2004 UTC (13 years, 10 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 10929 byte(s)
Diff to previous 82
*** empty log message ***


Revision 82 - (view) (annotate) - [select for diffs]
Added Tue Oct 26 06:53:54 2004 UTC (13 years, 11 months ago) by jgs
Original Path: trunk/esys2/finley/src/CPPAdapter/MeshAdapter.h
File length: 10452 byte(s)
Initial revision


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