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/* $Id$ */ |
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|
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/******************************************************* |
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* |
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* Copyright 2003-2007 by ACceSS MNRF |
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* Copyright 2007 by University of Queensland |
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* |
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* http://esscc.uq.edu.au |
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* Primary Business: Queensland, Australia |
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* Licensed under the Open Software License version 3.0 |
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* http://www.opensource.org/licenses/osl-3.0.php |
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* |
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*******************************************************/ |
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|
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#ifdef PASO_MPI |
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#include <mpi.h> |
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#endif |
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extern "C" { |
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#include "../Finley.h" |
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} |
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|
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#include "MeshAdapter.h" |
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#include "MeshAdapterFactory.h" |
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#include "SystemMatrixAdapter.h" |
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|
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#include "FinleyAdapterException.h" |
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// #include "esysUtils/EsysException.h" |
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#include "esysUtils/esysExceptionTranslator.h" |
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|
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#include "escript/AbstractContinuousDomain.h" |
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|
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#include <boost/python.hpp> |
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#include <boost/python/module.hpp> |
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#include <boost/python/def.hpp> |
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#include <boost/python/detail/defaults_gen.hpp> |
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|
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using namespace boost::python; |
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|
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/** |
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\page finley Finley |
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Finley is the python module name that contains the interfaces |
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to the C++ wrapper to finley. |
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|
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\version 1.0.0 |
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|
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\section class_desc Class Description: |
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Data |
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|
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\section class_limits Class Limitations: |
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None |
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|
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\section class_conds Class Conditions of Use: |
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None |
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|
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\section throws Throws: |
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None |
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|
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*/ |
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|
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// |
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// The BOOST_PYTHON_FUNCTION_OVERLOADS macro generates function overloads for optional |
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// arguments to the respective finley functions. |
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// !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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// |
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// NOTE: If the number of arguments to the finley functions change |
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// the magic numbers in the BOOST_PYTHON_FUNCTION_OVERLOADS call |
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// must change. |
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// |
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// !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(readMesh_overloads,finley::readMesh,1,2) |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(brick_overloads,finley::brick,0,12) |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(rectangle_overloads,finley::rectangle,0,9) |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(interval_overloads,finley::interval,0,6) |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(glueFaces_overloads,finley::glueFaces,1,3) |
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// BOOST_PYTHON_FUNCTION_OVERLOADS(joinFaces_overloads,finley::joinFaces,1,3) |
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|
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BOOST_PYTHON_MODULE(finleycpp) |
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{ |
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|
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// def("ReadMesh",finley::readMesh,readMesh_overloads()); |
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// def("Brick",finley::brick,brick_overloads()); |
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// def("Rectangle",finley::rectangle,rectangle_overloads()); |
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// def("Interval",finley::interval,interval_overloads()); |
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// def("GlueFaces",finley::glueFaces,glueFaces_overloads()); |
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// def("JoinFaces",finley::joinFaces,joinFaces_overloads()); |
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// |
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// NOTE: The return_value_policy is necessary for functions that |
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// return pointers. |
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|
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def("LoadMesh",finley::loadMesh, |
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(arg("fileName")="file.nc"), |
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return_value_policy<manage_new_object>()); |
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def("ReadMesh",finley::readMesh, |
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(arg("fileName")="file.fly",arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimize")=true), |
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return_value_policy<manage_new_object>()); |
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|
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def("ReadGmsh",finley::readGmsh, |
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(arg("fileName")="file.msh",arg("numDim"), arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, arg("optimize")=true), |
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return_value_policy<manage_new_object>()); |
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|
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def ("Brick",finley::brick, |
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(arg("n0")=1,arg("n1")=1,arg("n2")=1, |
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arg("order")=1, |
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arg("l0")=1.0,arg("l1")=1.0,arg("l2")=1.0, |
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arg("periodic0")=false,arg("periodic1")=false,arg("periodic2")=false, |
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arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, |
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arg("useElementsOnFace")=false, |
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arg("useFullElementOrder")=false, |
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arg("optimize")=false), |
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return_value_policy<manage_new_object>()); |
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|
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def ("Rectangle",finley::rectangle, |
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(arg("n0")=1,arg("n1")=1,arg("order")=1, |
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arg("l0")=1.0,arg("l1")=1.0, |
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arg("periodic0")=false,arg("periodic1")=false, |
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arg("integrationOrder")=-1, arg("reducedIntegrationOrder")=-1, |
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arg("useElementsOnFace")=false, |
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arg("useFullElementOrder")=false, |
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arg("optimize")=false), |
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return_value_policy<manage_new_object>()); |
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|
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def("Merge",finley::meshMerge, |
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return_value_policy<manage_new_object>()); |
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|
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def("GlueFaces",finley::glueFaces, |
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(arg("safetyFactor")=0.2, |
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arg("tolerance")=1.e-8, |
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arg("optimize")=true), |
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return_value_policy<manage_new_object>()); |
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|
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def("JoinFaces",finley::joinFaces, |
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(arg("safetyFactor")=0.2, |
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arg("tolerance")=1.e-8, |
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arg("optimize")=true), |
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return_value_policy<manage_new_object>()); |
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|
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register_exception_translator<finley::FinleyAdapterException>(&(esysUtils::esysExceptionTranslator)); |
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class_<finley::MeshAdapter, bases<escript::AbstractContinuousDomain> > |
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("MeshAdapter",init<optional <Finley_Mesh*> >()) |
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.def(init<const finley::MeshAdapter&>()) |
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.def("write",&finley::MeshAdapter::write) |
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.def("print_mesh_info",&finley::MeshAdapter::Print_Mesh_Info,(arg("full")=false)) |
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.def("dump",&finley::MeshAdapter::dump) |
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.def("getDescription",&finley::MeshAdapter::getDescription) |
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.def("getDim",&finley::MeshAdapter::getDim) |
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.def("getDataShape",&finley::MeshAdapter::getDataShape) |
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.def("addPDEToSystem",&finley::MeshAdapter::addPDEToSystem) |
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.def("addPDEToLumpedSystem",&finley::MeshAdapter::addPDEToLumpedSystem) |
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.def("addPDEToRHS",&finley::MeshAdapter::addPDEToRHS) |
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.def("newOperator",&finley::MeshAdapter::newSystemMatrix) |
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.def("getSystemMatrixTypeId",&finley::MeshAdapter::getSystemMatrixTypeId) |
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.def("setX",&finley::MeshAdapter::setNewX) |
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.def("getX",&finley::MeshAdapter::getX) |
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.def("getNormal",&finley::MeshAdapter::getNormal) |
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.def("getSize",&finley::MeshAdapter::getSize) |
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.def("saveDX",&finley::MeshAdapter::saveDX) |
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.def("saveVTK",&finley::MeshAdapter::saveVTK) |
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.def("setTagMap",&finley::MeshAdapter::setTagMap) |
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.def("getTag",&finley::MeshAdapter::getTag) |
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.def("isValidTagName",&finley::MeshAdapter::isValidTagName) |
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.def("showTagNames",&finley::MeshAdapter::showTagNames) |
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.def("getMPISize",&finley::MeshAdapter::getMPISize) |
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.def("getMPIRank",&finley::MeshAdapter::getMPIRank); |
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class_<finley::SystemMatrixAdapter, bases<escript::AbstractSystemMatrix> > |
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("OperatorAdapter",no_init) |
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.def("print_matrix_info",&finley::SystemMatrixAdapter::Print_Matrix_Info,(arg("full")=false)) |
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.def("nullifyRowsAndCols",&finley::SystemMatrixAdapter::nullifyRowsAndCols) |
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.def("resetValues",&finley::SystemMatrixAdapter::resetValues) |
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.def("saveMM",&finley::SystemMatrixAdapter::saveMM) |
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.def("saveHB",&finley::SystemMatrixAdapter::saveHB); |
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|
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} |
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