/[escript]/trunk/paso/src/SparseMatrix.cpp
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Revision 4873 - (view) (annotate) - [select for diffs]
Modified Wed Apr 16 06:38:51 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24678 byte(s)
Diff to previous 4869
whitespace only changes.


Revision 4869 - (view) (annotate) - [select for diffs]
Modified Mon Apr 14 10:39:22 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24723 byte(s)
Diff to previous 4867
all of paso now lives in its own namespace.


Revision 4867 - (view) (annotate) - [select for diffs]
Modified Fri Apr 11 12:29:49 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24755 byte(s)
Diff to previous 4863
paso: starting to polish


Revision 4863 - (view) (annotate) - [select for diffs]
Modified Thu Apr 10 06:24:55 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24777 byte(s)
Diff to previous 4852
cleansing


Revision 4852 - (view) (annotate) - [select for diffs]
Modified Wed Apr 9 03:58:08 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24782 byte(s)
Diff to previous 4845
paso util sweep


Revision 4845 - (view) (annotate) - [select for diffs]
Modified Tue Apr 8 11:35:27 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24751 byte(s)
Diff to previous 4843
I fink I broke it - now I thixed it.


Revision 4843 - (view) (annotate) - [select for diffs]
Modified Tue Apr 8 05:32:07 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24731 byte(s)
Diff to previous 4836
checkpointing paso::Preconditioner.


Revision 4836 - (view) (annotate) - [select for diffs]
Modified Mon Apr 7 05:51:55 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24960 byte(s)
Diff to previous 4830
"Some" SystemMatrix clean up.....


Revision 4830 - (view) (annotate) - [select for diffs]
Modified Thu Apr 3 04:45:06 2014 UTC (5 years, 1 month ago) by caltinay
File length: 24997 byte(s)
Diff to previous 4829
Removed obsolete file, reverted verbosity of test and a bit more cleanup.


Revision 4829 - (view) (annotate) - [select for diffs]
Modified Thu Apr 3 04:02:53 2014 UTC (5 years, 1 month ago) by caltinay
File length: 25002 byte(s)
Diff to previous 4819
checkpointing some SparseMatrix cleanup.


Revision 4819 - (view) (annotate) - [select for diffs]
Modified Tue Apr 1 03:50:23 2014 UTC (5 years, 1 month ago) by caltinay
File length: 13209 byte(s)
Diff to previous 4810
Pattern shared ptrs


Revision 4810 - (view) (annotate) - [select for diffs]
Modified Thu Mar 27 07:00:30 2014 UTC (5 years, 2 months ago) by caltinay
File length: 13359 byte(s)
Diff to previous 4803
Removed some obsolete checkPtr's. More to come...


Revision 4803 - (view) (annotate) - [select for diffs]
Modified Wed Mar 26 06:52:28 2014 UTC (5 years, 2 months ago) by caltinay
File length: 14165 byte(s)
Diff to previous 4797
Removed obsolete wrappers for malloc and friends.
Paso_Pattern -> paso::Pattern


Revision 4797 - (view) (annotate) - [select for diffs]
Modified Mon Mar 24 05:42:42 2014 UTC (5 years, 2 months ago) by caltinay
File length: 14240 byte(s)
Diff to previous 4657
put SparseMatrix into paso namespace, accompanied by minor code cleanup.


Revision 4657 - (view) (annotate) - [select for diffs]
Modified Thu Feb 6 06:12:20 2014 UTC (5 years, 3 months ago) by jfenwick
File length: 13132 byte(s)
Diff to previous 4521
I changed some files.
Updated copyright notices, added GeoComp.




Revision 4521 - (view) (annotate) - [select for diffs]
Modified Mon Aug 26 11:51:30 2013 UTC (5 years, 9 months ago) by jfenwick
File length: 13064 byte(s)
Diff to previous 4346
Remove bool_t
Part of random.



Revision 4346 - (view) (annotate) - [select for diffs]
Modified Tue Apr 2 04:46:45 2013 UTC (6 years, 1 month ago) by jfenwick
File length: 13068 byte(s)
Copied from: branches/doubleplusgood/paso/src/SparseMatrix.cpp revision 4345
Diff to previous 4325
Bringing the changes from doubleplusgood branch.
Can't merge directly because svn doesn't transfer changes to renamed files (mutter grumble).

Revision 4325 - (view) (annotate) - [select for diffs]
Modified Wed Mar 20 02:28:59 2013 UTC (6 years, 2 months ago) by jfenwick
Original Path: branches/doubleplusgood/paso/src/SparseMatrix.cpp
File length: 13068 byte(s)
Diff to previous 4280
all MEMALLOCs removed from PASO. further restructuring required

Revision 4280 - (view) (annotate) - [select for diffs]
Modified Wed Mar 6 06:45:32 2013 UTC (6 years, 2 months ago) by jfenwick
Original Path: branches/doubleplusgood/paso/src/SparseMatrix.cpp
File length: 13081 byte(s)
Diff to previous 4261
some memory management replacement

Revision 4261 - (view) (annotate) - [select for diffs]
Modified Wed Feb 27 06:09:33 2013 UTC (6 years, 2 months ago) by jfenwick
Original Path: branches/doubleplusgood/paso/src/SparseMatrix.cpp
File length: 13116 byte(s)
Copied from: branches/doubleplusgood/paso/src/SparseMatrix.c revision 4257
Diff to previous 4257
Initial all c++ build.
But ... there are now reinterpret_cast<>'s

Revision 4257 - (view) (annotate) - [select for diffs]
Modified Wed Feb 27 03:42:40 2013 UTC (6 years, 2 months ago) by jfenwick
Original Path: branches/doubleplusgood/paso/src/SparseMatrix.c
File length: 13116 byte(s)
Diff to previous 4154
Some simple experiments for c++ Finley


Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (6 years, 4 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 13116 byte(s)
Diff to previous 3981
Round 1 of copyright fixes

Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (6 years, 8 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 13116 byte(s)
Diff to previous 3911
First pass of updating copyright notices

Revision 3911 - (view) (annotate) - [select for diffs]
Modified Thu Jun 14 01:01:03 2012 UTC (6 years, 11 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12909 byte(s)
Diff to previous 3642
Copyright changes

Revision 3642 - (view) (annotate) - [select for diffs]
Modified Thu Oct 27 03:41:51 2011 UTC (7 years, 7 months ago) by caltinay
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12909 byte(s)
Diff to previous 3443
Assorted spelling/comment fixes in paso.


Revision 3443 - (view) (annotate) - [select for diffs]
Modified Tue Jan 18 05:38:48 2011 UTC (8 years, 4 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12879 byte(s)
Diff to previous 3442
test for AMG fixed. New test set guarantees SPD stiffness matrix. Previously this was not guaranteed and could lead to singular coarse level matrices (which cause MKL based runs to fail)

Revision 3442 - (view) (annotate) - [select for diffs]
Modified Tue Jan 18 01:47:36 2011 UTC (8 years, 4 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12770 byte(s)
Diff to previous 3402
 emeregncy

Revision 3402 - (view) (annotate) - [select for diffs]
Modified Tue Dec 7 07:36:12 2010 UTC (8 years, 5 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12409 byte(s)
Diff to previous 3312
AMG support now block size > 3 (requires clapack or MKL).

additional diagnostics for AMG 



Revision 3312 - (view) (annotate) - [select for diffs]
Modified Tue Oct 26 07:54:58 2010 UTC (8 years, 7 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12377 byte(s)
Diff to previous 3303
last step for a clean up version of the AMG

Revision 3303 - (view) (annotate) - [select for diffs]
Modified Mon Oct 25 04:33:31 2010 UTC (8 years, 7 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14662 byte(s)
Diff to previous 3283
more clean up work on the AMG

Revision 3283 - (view) (annotate) - [select for diffs]
Modified Mon Oct 18 22:39:28 2010 UTC (8 years, 7 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 15318 byte(s)
Diff to previous 3259
AMG reengineered, BUG is Smoother fixed.



Revision 3259 - (view) (annotate) - [select for diffs]
Modified Mon Oct 11 01:48:14 2010 UTC (8 years, 7 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 15115 byte(s)
Diff to previous 3094
Merging dudley and scons updates from branches


Revision 3094 - (view) (annotate) - [select for diffs]
Modified Fri Aug 13 08:38:06 2010 UTC (8 years, 9 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 15115 byte(s)
Diff to previous 3041
The MPI and sequational GAUSS_SEIDEL have been merged.
The couring and main diagonal pointer is now manged by the patternm which means that they are calculated once only even if the preconditioner is deleted.




Revision 3041 - (view) (annotate) - [select for diffs]
Modified Fri Jun 18 04:01:40 2010 UTC (8 years, 11 months ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14860 byte(s)
Diff to previous 3016
Should be faster with openmp. Some ROW-COL conversion.

Revision 3016 - (view) (annotate) - [select for diffs]
Modified Wed Apr 28 05:28:44 2010 UTC (9 years, 1 month ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14659 byte(s)
Diff to previous 3015
firstprivate added for OpenMP

Revision 3015 - (view) (annotate) - [select for diffs]
Modified Wed Apr 28 05:06:26 2010 UTC (9 years, 1 month ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14649 byte(s)
Diff to previous 3013
OpenMP commented out for now

Revision 3013 - (view) (annotate) - [select for diffs]
Modified Wed Apr 28 03:47:51 2010 UTC (9 years, 1 month ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14645 byte(s)
Diff to previous 3011
Block separation part commented out for AMG preconditioner

Revision 3011 - (view) (annotate) - [select for diffs]
Modified Wed Apr 28 02:21:23 2010 UTC (9 years, 1 month ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 14729 byte(s)
Diff to previous 3005
New method added for unrolling System matrix. Direct solver now uses unrolled copy of the AMG matrix.

Revision 3005 - (view) (annotate) - [select for diffs]
Modified Thu Apr 22 05:59:31 2010 UTC (9 years, 1 month ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12581 byte(s)
Diff to previous 2881
early call of setPreconditioner in FCT solver removed.

Revision 2881 - (view) (annotate) - [select for diffs]
Modified Thu Jan 28 02:03:15 2010 UTC (9 years, 3 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12553 byte(s)
Diff to previous 2705
Don't panic.
Updating copyright stamps


Revision 2705 - (view) (annotate) - [select for diffs]
Modified Thu Oct 1 23:21:10 2009 UTC (9 years, 7 months ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12553 byte(s)
Diff to previous 2608
Some openMP codes in AMG systems are removed for testing.

Revision 2608 - (view) (annotate) - [select for diffs]
Modified Tue Aug 18 01:25:18 2009 UTC (9 years, 9 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12503 byte(s)
Diff to previous 2554
Updating Lutz' email


Revision 2554 - (view) (annotate) - [select for diffs]
Modified Fri Jul 24 05:38:54 2009 UTC (9 years, 10 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12493 byte(s)
Diff to previous 2551
bug with MKL call fixed.

Revision 2551 - (view) (annotate) - [select for diffs]
Modified Thu Jul 23 09:19:15 2009 UTC (9 years, 10 months ago) by gross
Original Path: trunk/paso/src/SparseMatrix.c
File length: 12370 byte(s)
Diff to previous 2548
a problem with the sparse matrix unrolling fixed.

Revision 2548 - (view) (annotate) - [select for diffs]
Modified Mon Jul 20 06:20:06 2009 UTC (9 years, 10 months ago) by jfenwick
Original Path: trunk/paso/src/SparseMatrix.c
File length: 11847 byte(s)
Diff to previous 2489
Updating copyright notices

Revision 2489 - (view) (annotate) - [select for diffs]
Modified Tue Jun 23 06:00:25 2009 UTC (9 years, 11 months ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 11847 byte(s)
Diff to previous 2240
void *solver; is added to Paso_SpaseMatrix struct. Paso_MKL will need this.

Revision 2240 - (view) (annotate) - [select for diffs]
Modified Wed Feb 4 01:17:06 2009 UTC (10 years, 3 months ago) by artak
Original Path: trunk/paso/src/SparseMatrix.c
File length: 11823 byte(s)
Diff to previous 1811
Some statistical print outs are added in solver and loadMM to Paso_SparseMatrix method is added

Revision 1811 - (view) (annotate) - [select for diffs]
Modified Thu Sep 25 23:11:13 2008 UTC (10 years, 8 months ago) by ksteube
Original Path: trunk/paso/src/SparseMatrix.c
File length: 4579 byte(s)
Diff to previous 1628
Copyright updated in all files


Revision 1628 - (view) (annotate) - [select for diffs]
Modified Fri Jul 11 13:12:46 2008 UTC (10 years, 10 months ago) by phornby
Original Path: trunk/paso/src/SparseMatrix.c
File length: 4665 byte(s)
Diff to previous 1388

Merge in /branches/windows_from_1456_trunk_1620_merged_in branch.

You will find a preserved pre-merge trunk in tags under tags/trunk_at_1625.
That will be useful for diffing & checking on my stupidity.

Here is a list of the conflicts and their resolution at this
point in time.


=================================================================================
(LLWS == looks like white space).

finley/src/Assemble_addToSystemMatrix.c - resolve to branch - unused var. may be wrong.....
finley/src/CPPAdapter/SystemMatrixAdapter.cpp - resolve to branch - LLWS
finley/src/CPPAdapter/MeshAdapter.cpp - resolve to branch - LLWS
paso/src/PCG.c - resolve to branch - unused var fixes.
paso/src/SolverFCT.c - resolve to branch - LLWS
paso/src/FGMRES.c - resolve to branch - LLWS
paso/src/Common.h - resolve to trunk version. It's omp.h's include... not sure it's needed,
but for the sake of saftey.....
paso/src/Functions.c - resolve to branch version, indentation/tab removal and return error
on bad unimplemented Paso_FunctionCall.
paso/src/SolverFCT_solve.c - resolve to branch version, unused vars
paso/src/SparseMatrix_MatrixVector.c - resolve to branch version, unused vars.
escript/src/Utils.cpp - resloved to branch, needs WinSock2.h
escript/src/DataExpanded.cpp - resolved to branch version - LLWS
escript/src/DataFactory.cpp - resolve to branch version
=================================================================================

This currently passes tests on linux (debian), but is not checked on windows or Altix yet.

This checkin is to make a trunk I can check out for windows to do tests on it.

Known outstanding problem is in the operator=() method of exceptions
causing warning messages on the intel compilers.

May the God of doughnuts have mercy on my soul.



Revision 1388 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:58 2008 UTC (11 years, 4 months ago) by trankine
Original Path: trunk/paso/src/SparseMatrix.c
File length: 4683 byte(s)
Diff to previous 1387
And get the *(&(*&(* name right

Revision 1387 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 07:45:26 2008 UTC (11 years, 4 months ago) by trankine
Original Path: temp/paso/src/SparseMatrix.c
File length: 4683 byte(s)
Diff to previous 1384
Restore the trunk that existed before the windows changes were committed to the (now moved to branches) old trunk.

Revision 1384 - (view) (annotate) - [select for diffs]
Modified Fri Jan 11 02:29:38 2008 UTC (11 years, 4 months ago) by phornby
Original Path: temp_trunk_copy/paso/src/SparseMatrix.c
File length: 4683 byte(s)
Diff to previous 1313
Make a temp copy of the trunk before checking in the windows changes



Revision 1313 - (view) (annotate) - [select for diffs]
Added Tue Sep 25 01:44:26 2007 UTC (11 years, 8 months ago) by ksteube
Original Path: trunk/paso/src/SparseMatrix.c
File length: 4683 byte(s)
Copied a handful of files from trunk-mpi-branch into trunk


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