/[escript]/trunk/ripley/src/Rectangle.cpp
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Revision 4353 - (view) (annotate) - [select for diffs]
Modified Fri Apr 5 00:14:35 2013 UTC (6 years, 2 months ago) by caltinay
File length: 243040 byte(s)
Diff to previous 4346
For some reason std::isnan<float> is not available on NCI so changed this
to ::isnan. Added options file for NCI vayu.


Revision 4346 - (view) (annotate) - [select for diffs]
Modified Tue Apr 2 04:46:45 2013 UTC (6 years, 2 months ago) by jfenwick
File length: 243038 byte(s)
Diff to previous 4334
Bringing the changes from doubleplusgood branch.
Can't merge directly because svn doesn't transfer changes to renamed files (mutter grumble).

Revision 4334 - (view) (annotate) - [select for diffs]
Modified Thu Mar 21 06:00:14 2013 UTC (6 years, 2 months ago) by caltinay
File length: 243053 byte(s)
Diff to previous 4286
Preparations for Voxet (GOCAD) binary grid output + code clean up.
Changed node id's order to remove code duplication in weipa.
More work to do...


Revision 4286 - (view) (annotate) - [select for diffs]
Modified Thu Mar 7 04:28:11 2013 UTC (6 years, 3 months ago) by caltinay
File length: 239005 byte(s)
Diff to previous 4277
Assorted spelling fixes.


Revision 4277 - (view) (annotate) - [select for diffs]
Modified Wed Mar 6 01:30:41 2013 UTC (6 years, 3 months ago) by caltinay
File length: 239006 byte(s)
Diff to previous 4174
Implemented claimed support for mixing data with different resolutions.


Revision 4174 - (view) (annotate) - [select for diffs]
Modified Wed Jan 30 03:21:27 2013 UTC (6 years, 4 months ago) by caltinay
File length: 237822 byte(s)
Diff to previous 4154
ripley's readBinaryGrid and readNcGrid now filter out NaN leaving the relevant
destination data points untouched.


Revision 4154 - (view) (annotate) - [select for diffs]
Modified Tue Jan 22 09:30:23 2013 UTC (6 years, 4 months ago) by jfenwick
File length: 237667 byte(s)
Diff to previous 4013
Round 1 of copyright fixes

Revision 4013 - (view) (annotate) - [select for diffs]
Modified Thu Oct 4 03:13:27 2012 UTC (6 years, 8 months ago) by caltinay
File length: 237667 byte(s)
Diff to previous 4010
Implemented netCDF grid reader analogous to binary grid reader in ripley.


Revision 4010 - (view) (annotate) - [select for diffs]
Modified Tue Oct 2 06:57:11 2012 UTC (6 years, 8 months ago) by caltinay
File length: 234406 byte(s)
Diff to previous 4002
Fixed a potential div by zero in ripley's automatic domain subdivider....


Revision 4002 - (view) (annotate) - [select for diffs]
Modified Fri Sep 28 00:16:56 2012 UTC (6 years, 8 months ago) by caltinay
File length: 234398 byte(s)
Diff to previous 3981
Fixed a memory leak (freeing paso coupler) in ripley.


Revision 3981 - (view) (annotate) - [select for diffs]
Modified Fri Sep 21 02:47:54 2012 UTC (6 years, 8 months ago) by jfenwick
File length: 234366 byte(s)
Diff to previous 3971
First pass of updating copyright notices

Revision 3971 - (view) (annotate) - [select for diffs]
Modified Wed Sep 19 02:55:35 2012 UTC (6 years, 9 months ago) by caltinay
File length: 234247 byte(s)
Diff to previous 3943
Implemented binary grid reader in ripley which is now used in ER Mapper source.
Interface/details likely to change but need to get this running now.


Revision 3943 - (view) (annotate) - [select for diffs]
Modified Thu Aug 9 04:43:24 2012 UTC (6 years, 10 months ago) by caltinay
File length: 231736 byte(s)
Diff to previous 3913
Added heuristics for number of domain subdivisions to ripley so ripley domains
can now be created without specifying the values manually (but a warning will
be printed).


Revision 3913 - (view) (annotate) - [select for diffs]
Modified Tue Jun 19 06:21:58 2012 UTC (7 years ago) by caltinay
File length: 230292 byte(s)
Diff to previous 3806
Fixed misuse of getSampleDataRO with lazy data in ripley.


Revision 3806 - (view) (annotate) - [select for diffs]
Modified Mon Feb 6 02:32:48 2012 UTC (7 years, 4 months ago) by caltinay
File length: 227116 byte(s)
Diff to previous 3800
ripley::getSize() also returns circumcircle now.


Revision 3800 - (view) (annotate) - [select for diffs]
Modified Fri Feb 3 01:18:06 2012 UTC (7 years, 4 months ago) by caltinay
File length: 227103 byte(s)
Diff to previous 3795
Fixed integration with constant data on ripley.


Revision 3795 - (view) (annotate) - [select for diffs]
Modified Thu Feb 2 05:54:34 2012 UTC (7 years, 4 months ago) by caltinay
File length: 227421 byte(s)
Diff to previous 3793
Had to remove 'nowait' directive from PDE boundary conditions since all
4 (2D) / 8 (3D) values are updated the way it is implemented. This caused
race conditions when updating RHS.


Revision 3793 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 07:39:43 2012 UTC (7 years, 4 months ago) by gross
File length: 227533 byte(s)
Diff to previous 3792
new implementation of FCT solver with some modifications to the python interface

Revision 3792 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 06:16:25 2012 UTC (7 years, 4 months ago) by caltinay
File length: 227533 byte(s)
Copied from: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp revision 3791
Diff to previous 3791
Merged ripley rectangular domain into trunk.


Revision 3791 - (view) (annotate) - [select for diffs]
Modified Wed Feb 1 05:10:22 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 227533 byte(s)
Diff to previous 3785
Getting ready to merge with trunk.


Revision 3785 - (view) (annotate) - [select for diffs]
Modified Wed Jan 25 04:00:33 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 230696 byte(s)
Diff to previous 3781
Fixed early deallocation of matrix pattern.


Revision 3781 - (view) (annotate) - [select for diffs]
Modified Mon Jan 23 22:18:49 2012 UTC (7 years, 4 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 230612 byte(s)
Diff to previous 3777
Since setX() is not supported the constructors now take location and extent.
Python wrapper allows construction the old way with l0,l1 or with
tuples (x0,x1),(y0,y1).


Revision 3777 - (view) (annotate) - [select for diffs]
Modified Thu Jan 19 06:17:38 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 230475 byte(s)
Diff to previous 3776
3D tests pass, yeah :-)


Revision 3776 - (view) (annotate) - [select for diffs]
Modified Thu Jan 19 03:48:35 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 230379 byte(s)
Diff to previous 3773
Finished 2D - all 2D PDE (non-lumped) tests pass now


Revision 3773 - (view) (annotate) - [select for diffs]
Modified Wed Jan 18 04:27:53 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 194963 byte(s)
Diff to previous 3770
Adjusted interface for boundary conditions.


Revision 3770 - (view) (annotate) - [select for diffs]
Modified Wed Jan 18 01:40:15 2012 UTC (7 years, 5 months ago) by gross
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 430930 byte(s)
Diff to previous 3769
BC added

Revision 3769 - (view) (annotate) - [select for diffs]
Modified Tue Jan 17 04:09:55 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 183085 byte(s)
Diff to previous 3768
Preparations for PDE boundary element assembly.
Removed some code that slipped in before.


Revision 3768 - (view) (annotate) - [select for diffs]
Modified Fri Jan 13 07:17:16 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 191601 byte(s)
Diff to previous 3766
weipa processes ripley 3D boundary elements now.


Revision 3766 - (view) (annotate) - [select for diffs]
Modified Thu Jan 12 08:17:49 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 191592 byte(s)
Diff to previous 3764
Checkpoint. Getting weipa to like ripley again.


Revision 3764 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 06:31:15 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 190875 byte(s)
Diff to previous 3762
Fixed integration now that elements overlap + code cleanup.


Revision 3762 - (view) (annotate) - [select for diffs]
Modified Tue Jan 10 00:01:45 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 194843 byte(s)
Diff to previous 3761
PDE assemblage with reduced order done.


Revision 3761 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 06:50:33 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 168112 byte(s)
Diff to previous 3760
Can solve full order systems of PDEs in 2D and 3D now.


Revision 3760 - (view) (annotate) - [select for diffs]
Modified Mon Jan 9 05:21:18 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 167927 byte(s)
Diff to previous 3759
-implemented addPDEToRHS() and setToSize()
-added a few missing calls to requireWrite()
-added assemblePDESystem() to Rectangle but haven't tested yet


Revision 3759 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 06:54:51 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 105801 byte(s)
Diff to previous 3757
Implemented ownSample for face elements.


Revision 3757 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 04:48:27 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 104957 byte(s)
Diff to previous 3756
Implemented ownSample() for DOF and Elements.


Revision 3756 - (view) (annotate) - [select for diffs]
Modified Fri Jan 6 02:35:19 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 104546 byte(s)
Diff to previous 3755
Fixed interpolation from DOF to nodes and moved common code to the base class.


Revision 3755 - (view) (annotate) - [select for diffs]
Modified Thu Jan 5 06:51:31 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 109320 byte(s)
Diff to previous 3754
Made element IDs globally unique so ownSample can work (to be implemented).
Fixed couple block in 3D so PDEs seem to work now with MPI :-)


Revision 3754 - (view) (annotate) - [select for diffs]
Modified Wed Jan 4 07:07:37 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 108520 byte(s)
Diff to previous 3753
checkpoint. 3D single PDEs almost working


Revision 3753 - (view) (annotate) - [select for diffs]
Modified Tue Jan 3 09:01:49 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 109555 byte(s)
Diff to previous 3752
Took over Node->DOF interpolation to Brick and parallelised some loops.


Revision 3752 - (view) (annotate) - [select for diffs]
Modified Tue Jan 3 08:06:36 2012 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 109461 byte(s)
Diff to previous 3750
can solve PDEs in 2D with MPI now, boundary conditions still missing.


Revision 3750 - (view) (annotate) - [select for diffs]
Modified Fri Dec 23 01:20:34 2011 UTC (7 years, 5 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 112712 byte(s)
Diff to previous 3748
Checkpoint - reinstated DOF FS and tried to fix couple blocks...


Revision 3748 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 07:36:19 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 115252 byte(s)
Diff to previous 3746
PDE assembly in serial and 2D seems to be doing what it's supposed to when
boundary elements are not involved.


Revision 3746 - (view) (annotate) - [select for diffs]
Modified Thu Dec 15 00:02:22 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 60325 byte(s)
Diff to previous 3744
In Ripley Solution==ContinuousFunction and ReducedSolution==ReducedCF now.
Removed a test in escript that relied on failure when trying to tag Data on
Solution/ReducedSolution.


Revision 3744 - (view) (annotate) - [select for diffs]
Modified Tue Dec 13 06:41:54 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 60698 byte(s)
Diff to previous 3735
Implemented (Face)Elements->Reduced(Face)Elements interpolation and started
separating DOF and nodes.
Also, implemented operator==() so that a==b for different domain objects a and
b which are in the same state.


Revision 3735 - (view) (annotate) - [select for diffs]
Modified Fri Dec 9 05:03:08 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 60197 byte(s)
Diff to previous 3733
Set initial node/element/face tags to 0 and updated tests.


Revision 3733 - (view) (annotate) - [select for diffs]
Modified Fri Dec 9 04:02:56 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 60054 byte(s)
Diff to previous 3724
escript on ripley tests pass. However, returning 0 for number of point elements
and DOF id's are bogus.


Revision 3724 - (view) (annotate) - [select for diffs]
Modified Wed Dec 7 07:35:21 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 59905 byte(s)
Diff to previous 3722
Edits to generated code in Rectangle (renamed constants & removed duplicates,
more nowait optimizations)


Revision 3722 - (view) (annotate) - [select for diffs]
Modified Wed Dec 7 05:53:22 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 64100 byte(s)
Diff to previous 3713
All "util on ripley" tests pass now :-)
-added support for node/element/face tags
-implemented setToNormal()
-added a bunch of omp nowait


Revision 3713 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 04:43:29 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 59378 byte(s)
Diff to previous 3711
Integrals in 2D and 3D for rectangle & brick elements & face elements in
regular and reduced orders.


Revision 3711 - (view) (annotate) - [select for diffs]
Modified Tue Dec 6 00:24:43 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 52598 byte(s)
Diff to previous 3707
Interpolation & Gradient for reduced elements & faces.


Revision 3707 - (view) (annotate) - [select for diffs]
Modified Mon Dec 5 05:48:25 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 42671 byte(s)
Diff to previous 3704
Fixes to the face element code.


Revision 3704 - (view) (annotate) - [select for diffs]
Modified Mon Dec 5 01:59:08 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 35855 byte(s)
Diff to previous 3702
Interpolation on faces.


Revision 3702 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 06:12:32 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 32253 byte(s)
Diff to previous 3701
Gradient for Rectangle elements.


Revision 3701 - (view) (annotate) - [select for diffs]
Modified Fri Dec 2 02:04:58 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 28971 byte(s)
Diff to previous 3699
Prepared interpolation methods.


Revision 3699 - (view) (annotate) - [select for diffs]
Modified Thu Dec 1 22:59:42 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 29713 byte(s)
Diff to previous 3698
getPattern() for Rectangle. Couple node numbering is likely to change once
we get to the PDE assembly.


Revision 3698 - (view) (annotate) - [select for diffs]
Modified Tue Nov 29 00:47:29 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 18405 byte(s)
Diff to previous 3697
[x] Rectangle...
[x] Brick node id's and weipa compatibility



Revision 3697 - (view) (annotate) - [select for diffs]
Modified Mon Nov 28 04:52:00 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 18618 byte(s)
Diff to previous 3691
[x] Rectangle node id's and weipa compatibility
[ ] Brick...


Revision 3691 - (view) (annotate) - [select for diffs]
Added Wed Nov 23 23:07:37 2011 UTC (7 years, 6 months ago) by caltinay
Original Path: branches/ripleygmg_from_3668/ripley/src/Rectangle.cpp
File length: 10904 byte(s)
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